540517
product: 738087
reactant: 738039
type: Reaction
product: 738063
name: Dihydroneopterin triphosphate pyrophosphatase
reversible: false
product: 738075
kinetic law: 738099
fast: false
reactant: 738051
notes: Abbreviation: R_DNTPPA Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : ahdt + h2o --> dhpmp + h + ppi Confidence Level: 2 JLR- Neidhardt pg 667 genes: LOCUS:BPLAN_445#ABBREVIATION:idi#ECNUMBERS:5.3.3.2# proteins: NAME:isopentenyl diphosphate isomerase#ABBREVIATION:Idi# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_445)

542497
value: 999999.0
type: LocalParameter

743292
stoichiometry: 1.0
species: 539969
type: SpeciesReference

753047
stoichiometry: 1.0
species: 539560
type: SpeciesReference

541630
value: 0.0
type: LocalParameter

541973
value: 999999.0
type: LocalParameter

543979
value: 999999.0
type: LocalParameter

543493
value: 0.0
type: LocalParameter

543573
value: 999999.0
type: LocalParameter

541477
value: 999999.0
type: LocalParameter

540126
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Xanthosine_C10H12N4O6
type: Species

732079
stoichiometry: 1.0
species: 539779
type: SpeciesReference

736566
stoichiometry: 1.0
species: 539936
type: SpeciesReference

541582
value: 0.0
type: LocalParameter

752804
stoichiometry: 1.0
species: 539611
type: SpeciesReference

543428
value: 0.0
type: LocalParameter

749744
stoichiometry: 1.0
species: 540003
type: SpeciesReference

539613
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Agmatine_C5H16N4
type: Species

542496
value: 0.0
type: LocalParameter

542403
value: 0.0
type: LocalParameter

756501
stoichiometry: 1.0
species: 540107
type: SpeciesReference

541974
value: 0.0
type: LocalParameter

741481
stoichiometry: 2.0
species: 539783
type: SpeciesReference

540125
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Xanthosine 5'-phosphate_C10H11N4O9P
type: Species

540886
notes: Abbreviation: R_Kt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + k[e] <==> h[c] + k[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_066#ABBREVIATION:ktrB# LOCUS:BPLAN_065#ABBREVIATION:ktrA# proteins: NAME:K+ uptake transporter subunit KtrB#ABBREVIATION:KtrB# NAME:K+ uptake transporter subunit KtrA#ABBREVIATION:KtrA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_066) and (BPLAN_065)
reversible: true
type: Reaction
product: 744898
product: 744886
reactant: 744874
fast: false
kinetic law: 744910
name: potassium reversible transport via proton symport
reactant: 744862

541631
value: 999999.0
type: LocalParameter

733965
stoichiometry: 45.7318
species: 539659
type: SpeciesReference

540484
product: 737412
type: Reaction
reactant: 737363
kinetic law: 737424
reactant: 737376
product: 737388
reactant: 737351
reversible: false
name: dihydrofolate synthase
fast: false
notes: Abbreviation: R_DHFS Synonyms: _0 EC Number: 6.3.2.12 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + dhpt + glu-L --> adp + dhf + pi Confidence Level: 2 genes: LOCUS:BPLAN_453#ABBREVIATION:folC#ECNUMBERS:6.3.2.12,-!-,6.3.2.17# proteins: NAME:folypolyglutamate synthase and dihydrofolate synthase#ABBREVIATION:FolC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_453)
product: 737400

542118
value: -999999.0
type: LocalParameter

742989
stoichiometry: 1.0
species: 539779
type: SpeciesReference

750057
stoichiometry: 1.0
species: 539783
type: SpeciesReference

541581
value: 0.0
type: LocalParameter

539508
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Deoxy-D-ribose 1-phosphate_C5H9O7P
type: Species

752707
stoichiometry: 1.0
species: 539977
type: SpeciesReference

737448
stoichiometry: 1.0
species: 539987
type: SpeciesReference

544049
value: 999999.0
type: LocalParameter

755463
stoichiometry: 1.0
species: 539702
type: SpeciesReference

542404
value: 0.0
type: LocalParameter

540889
product: 744958
reversible: false
type: Reaction
reactant: 744946
name: L-leucine transport via ABC system
product: 744995
kinetic law: 745007
product: 744970
notes: Abbreviation: R_LEUabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + leu-L[e] --> adp[c] + h[c] + leu-L[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 744983
reactant: 744934
reactant: 744922
fast: false

544046
value: 0.0
type: LocalParameter

543491
value: 0.0
type: LocalParameter

741373
stoichiometry: 1.0
species: 539752
type: SpeciesReference

541971
value: 0.0
type: LocalParameter

540124
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Xanthine_C5H4N4O2
type: Species

543571
value: -999999.0
type: LocalParameter

542188
value: 0.0
type: LocalParameter

542115
value: 0.0
type: LocalParameter

543426
value: 999999.0
type: LocalParameter

748646
stoichiometry: 1.0
species: 539720
type: SpeciesReference

732129
stoichiometry: 1.0
species: 539478
type: SpeciesReference

750883
stoichiometry: 1.0
species: 539682
type: SpeciesReference

539616
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)dihydropteridine triphosphate_C9H12N5O13P3
type: Species

753724
stoichiometry: 1.0
species: 539590
type: SpeciesReference

742635
stoichiometry: 1.0
species: 539739
type: SpeciesReference

541261
kinetic law: 753300
reactant: 753252
product: 753288
type: Reaction
product: 753264
reactant: 753240
notes: Abbreviation: R_RNDR2 Synonyms: _0 EC Number: 1.17.4.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gdp + trdrd --> dgdp + h2o + trdox Confidence Level: 2 genes: LOCUS:BPLAN_330#ABBREVIATION:nrdE#ECNUMBERS:1.17.4.1# LOCUS:BPLAN_p004#ABBREVIATION:nrdF#ECNUMBERS:1.17.4.1# proteins: NAME:Ribonucleoside diphosphate reductase subunit alpha#ABBREVIATION:NrdE# NAME:ribonucleotide-diphosphate reductase beta subunit#ABBREVIATION:NrdE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_330 and BPLAN_p004)
fast: false
name: ribonucleoside-diphosphate reductase (GDP)
product: 753276
reversible: false

752915
stoichiometry: 1.0
species: 539784
type: SpeciesReference

744886
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542329
value: 999999.0
type: LocalParameter

540337
reactant: 733227
notes: Abbreviation: R_ARGN Synonyms: _0 EC Number: 3.5.3.1 SUBSYSTEM: Urea cycle/amino group metabolism Equation: [c] : arg-L + h2o --> orn + urea Confidence Level: 2 genes: LOCUS:BPLAN_574#ABBREVIATION:speB#ECNUMBERS:3.5.3.11# proteins: NAME:agmatinase#ABBREVIATION:SpeB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_574)
product: 733252
reactant: 733240
type: Reaction
product: 733264
name: arginase
kinetic law: 733276
fast: false
reversible: false

731837
stoichiometry: 1.0
species: 539776
type: SpeciesReference

540661
kinetic law: 740141
product: 740129
reactant: 740117
notes: Abbreviation: R_EX_pyr_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : pyr <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Pyruvate exchange
type: Reaction

542187
value: 0.0
type: LocalParameter

540123
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Valine_C5H11NO2
type: Species

541474
value: 0.0
type: LocalParameter

541688
value: 0.0
type: LocalParameter

747268
stoichiometry: 1.0
species: 539798
type: SpeciesReference

542116
value: 0.0
type: LocalParameter

544047
value: 0.0
type: LocalParameter

542494
value: 0.0
type: LocalParameter

539615
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: S-Adenosyl-L-homocysteine_C14H20N6O5S
type: Species

748792
stoichiometry: 1.0
species: 539701
type: SpeciesReference

738811
stoichiometry: 1.0
species: 539630
type: SpeciesReference

540122
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Valine_C5H11NO2
type: Species

542406
value: -999999.0
type: LocalParameter

746228
stoichiometry: 2.0
species: 539784
type: SpeciesReference

541634
value: 0.0
type: LocalParameter

734254
stoichiometry: 0.0276
species: 540006
type: SpeciesReference

541267
fast: false
reactant: 753396
name: ribonucleoside-diphosphate reductase (UDP)
notes: Abbreviation: R_RNDR4 Synonyms: _0 EC Number: 1.17.4.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : trdrd + udp --> dudp + h2o + trdox Confidence Level: 2 genes: LOCUS:BPLAN_330#ABBREVIATION:nrdE#ECNUMBERS:1.17.4.1# LOCUS:BPLAN_p004#ABBREVIATION:nrdF#ECNUMBERS:1.17.4.1# proteins: NAME:Ribonucleoside diphosphate reductase subunit alpha#ABBREVIATION:NrdE# NAME:ribonucleotide-diphosphate reductase beta subunit#ABBREVIATION:NrdE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_330 and BPLAN_p004)
product: 753420
product: 753408
product: 753432
reactant: 753384
reversible: false
kinetic law: 753444
type: Reaction

755665
stoichiometry: 1.0
species: 540056
type: SpeciesReference

751052
stoichiometry: 1.0
species: 539673
type: SpeciesReference

541529
value: 0.0
type: LocalParameter

543283
value: 0.0
type: LocalParameter

543638
value: 0.0
type: LocalParameter

543200
value: -999999.0
type: LocalParameter

543424
value: 0.0
type: LocalParameter

543577
value: 0.0
type: LocalParameter

540121
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: UTP_C9H11N2O15P3
type: Species

752792
stoichiometry: 1.0
species: 540037
type: SpeciesReference

542185
value: 999999.0
type: LocalParameter

543496
value: 999999.0
type: LocalParameter

542407
value: 999999.0
type: LocalParameter

541970
value: 0.0
type: LocalParameter

736206
stoichiometry: 1.0
species: 539685
type: SpeciesReference

540667
kinetic law: 740213
product: 740201
reactant: 740189
notes: Abbreviation: R_EX_succ_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : succ <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Succinate exchange
type: Reaction

543976
value: 0.0
type: LocalParameter

540514
type: Reaction
reactant: 737978
name: Dihydroneopterin monophosphate dephosphorylase
product: 738003
product: 738015
reversible: false
kinetic law: 738027
fast: false
reactant: 737991
notes: Abbreviation: R_DNMPPA Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : dhpmp + h2o --> dhnpt + pi Confidence Level: 1 JLR- Neidhardt page 667 genes: none proteins: none citations: none GENE ASSOCIATION:

751113
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543578
value: -999999.0
type: LocalParameter

746676
stoichiometry: 1.0
species: 540013
type: SpeciesReference

739656
stoichiometry: 1.0
species: 540157
type: SpeciesReference

738715
stoichiometry: 1.0
species: 540005
type: SpeciesReference

542184
value: 0.0
type: LocalParameter

540334
reactant: 733179
reactant: 733167
type: Reaction
product: 733191
notes: Abbreviation: R_ARGDC Synonyms: _0 EC Number: 4.1.1.19 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : arg-L + h --> agm + co2 Confidence Level: 2 genes: LOCUS:BPLAN_573#ABBREVIATION:speA#ECNUMBERS:4.1.1.19# proteins: NAME:Arginine decarboxylase#ABBREVIATION:SpeA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_573)
reversible: false
fast: false
name: arginine decarboxylase
kinetic law: 733215
product: 733203

540487
kinetic law: 737511
product: 737498
reversible: false
product: 737460
type: Reaction
reactant: 737436
reactant: 737448
notes: Abbreviation: R_DHNAOT Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : dhna + octdp --> 2dmmq8 + co2 + h + ppi Confidence Level: 2 EC 2.5.1-; menA Reaction is uncharged the loss of 2H (conversion from quinol to quinone form is thought to be spontaneous). genes: LOCUS:BPLAN_368#ABBREVIATION:menA#ECNUMBERS:2.5.1.-# proteins: NAME:_1,4 dihydroxy-2-napthoate octaprenyltransferase#ABBREVIATION:MenA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_368)
product: 737486
fast: false
product: 737473
name: _1,4-dihydroxy-2-naphthoate octaprenyltransferase

540664
kinetic law: 740177
product: 740165
reactant: 740153
notes: Abbreviation: R_EX_ser_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : ser-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Serine exchange
type: Reaction

540511
fast: false
reactant: 737913
notes: Abbreviation: R_DMATT Synonyms: _0 EC Number: 2.5.1.1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : dmpp + ipdp --> grdp + ppi Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reversible: false
name: dimethylallyltranstransferase
type: Reaction
product: 737952
kinetic law: 737965
reactant: 737926
product: 737939

543281
value: 0.0
type: LocalParameter

541378
kinetic law: 755823
product: 755811
product: 755799
reactant: 755787
notes: Abbreviation: R_TRPS3 Synonyms: _0 EC Number: 4.2.1.20 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 3ig3p --> g3p + indole Confidence Level: 2 JLR genes: LOCUS:BPLAN_214#ABBREVIATION:trpA#ECNUMBERS:4.2.1.20# LOCUS:BPLAN_215#ABBREVIATION:trpB#ECNUMBERS:4.2.1.20# proteins: NAME:Tryptophan synthase#ABBREVIATION:TrpA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_214 and BPLAN_215)
fast: false
reversible: false
name: tryptophan synthase (indoleglycerol phosphate)
type: Reaction

740646
stoichiometry: 1.0
species: 539735
type: SpeciesReference

543977
value: 0.0
type: LocalParameter

755920
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542630
value: 0.0
type: LocalParameter

542499
value: 0.0
type: LocalParameter

745659
stoichiometry: 1.0
species: 540083
type: SpeciesReference

757129
stoichiometry: 1.0
species: 540117
type: SpeciesReference

541527
value: 0.0
type: LocalParameter

542119
value: 999999.0
type: LocalParameter

740791
stoichiometry: 1.0
species: 539779
type: SpeciesReference

743426
stoichiometry: 1.0
species: 540078
type: SpeciesReference

543202
value: 999999.0
type: LocalParameter

742115
stoichiometry: 1.0
species: 539966
type: SpeciesReference

543575
value: 0.0
type: LocalParameter

543636
value: 999999.0
type: LocalParameter

542409
value: 0.0
type: LocalParameter

541633
value: 0.0
type: LocalParameter

543494
value: -999999.0
type: LocalParameter

757359
stoichiometry: 1.0
species: 540122
type: SpeciesReference

541264
reversible: false
type: Reaction
kinetic law: 753372
reactant: 753312
notes: Abbreviation: R_RNDR3 Synonyms: _0 EC Number: 1.17.4.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : cdp + trdrd --> dcdp + h2o + trdox Confidence Level: 2 genes: LOCUS:BPLAN_330#ABBREVIATION:nrdE#ECNUMBERS:1.17.4.1# LOCUS:BPLAN_p004#ABBREVIATION:nrdF#ECNUMBERS:1.17.4.1# proteins: NAME:Ribonucleoside diphosphate reductase subunit alpha#ABBREVIATION:NrdE# NAME:ribonucleotide-diphosphate reductase beta subunit#ABBREVIATION:NrdE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_330 and BPLAN_p004)
name: ribonucleoside-diphosphate reductase (CDP)
reactant: 753324
product: 753336
product: 753348
fast: false
product: 753360

733881
stoichiometry: 1.0
species: 539779
type: SpeciesReference

735465
stoichiometry: 1.0
species: 539544
type: SpeciesReference

539611
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: ADP_C10H12N5O10P2
type: Species

731681
stoichiometry: 1.0
species: 539611
type: SpeciesReference

736979
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543423
value: 0.0
type: LocalParameter

738279
stoichiometry: 1.0
species: 539719
type: SpeciesReference

735928
stoichiometry: 1.0
species: 539584
type: SpeciesReference

736290
stoichiometry: 1.0
species: 539671
type: SpeciesReference

734604
stoichiometry: 1.0
species: 539697
type: SpeciesReference

540090
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Thymine_C5H6N2O2
type: Species

736627
stoichiometry: 1.0
species: 539681
type: SpeciesReference

541150
fast: false
reactant: 750738
reversible: false
type: Reaction
product: 750762
kinetic law: 750774
notes: Abbreviation: R_PPCDC Synonyms: _0 EC Number: 4.1.1.36 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 4ppcys + h --> co2 + pan4p Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 750750
reactant: 750725
name: phosphopantothenoylcysteine decarboxylase

751003
stoichiometry: 1.0
species: 539966
type: SpeciesReference

543204
value: 0.0
type: LocalParameter

736314
stoichiometry: 1.0
species: 539663
type: SpeciesReference

741250
stoichiometry: 1.0
species: 539779
type: SpeciesReference

749805
stoichiometry: 1.0
species: 539964
type: SpeciesReference

544040
value: -999999.0
type: LocalParameter

540814
reactant: 743195
fast: false
product: 743219
notes: Abbreviation: R_HPPK2 Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 6hmhpt + atp --> 6hmhptpp + amp + h Confidence Level: 2 JLR- Neidhardt pg 667 genes: LOCUS:BPLAN_016#ABBREVIATION:folK#ECNUMBERS:2.7.6.3# proteins: NAME:_7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase#ABBREVIATION:FolK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_016)
reactant: 743207
product: 743231
reversible: false
product: 743243
name: _6-hydroxymethyl-dihydropterin pyrophosphokinase
kinetic law: 743256
type: Reaction

540013
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Phosphate_HO4P
type: Species

542515
value: 999999.0
type: LocalParameter

542981
value: 999999.0
type: LocalParameter

741835
stoichiometry: 1.0
species: 539756
type: SpeciesReference

542182
value: 0.0
type: LocalParameter

735102
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species: 539789
type: SpeciesReference

747329
stoichiometry: 1.0
species: 539970
type: SpeciesReference

539929
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: potassium_K
type: Species

542254
value: 0.0
type: LocalParameter

540091
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Thymidine_C10H14N2O5
type: Species

543421
value: 0.0
type: LocalParameter

543358
value: 0.0
type: LocalParameter

753942
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species: 540086
type: SpeciesReference

753614
stoichiometry: 1.0
species: 539760
type: SpeciesReference

541375
notes: Abbreviation: R_TRPS2 Synonyms: _0 EC Number: 4.2.1.20 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : indole + ser-L --> h2o + trp-L Confidence Level: 2 A pyridoxal-phosphate protein. Also catalyses the conversion of serine and indole into tryptophan and water, and of indoleglycerol phosphate into indole and glyceraldehyde phosphate (the latter reaction was listed formerly as EC 4.1.2.8). genes: LOCUS:BPLAN_214#ABBREVIATION:trpA#ECNUMBERS:4.2.1.20# LOCUS:BPLAN_215#ABBREVIATION:trpB#ECNUMBERS:4.2.1.20# proteins: NAME:Tryptophan synthase#ABBREVIATION:TrpA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_214 and BPLAN_215)
reversible: false
fast: false
product: 755763
reactant: 755739
product: 755751
kinetic law: 755775
name: tryptophan synthase (indole)
type: Reaction
reactant: 755727

541526
value: 999999.0
type: LocalParameter

543286
value: 999999.0
type: LocalParameter

539500
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate_C12H13NO9P
type: Species

540733
kinetic law: 741421
product: 741409
product: 741397
type: Reaction
name: phosphoribosylglycinamide formyltransferase
notes: Abbreviation: R_GARFT Synonyms: _1 EC Number: 2.1.2.2 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : 10fthf + gar --> fgam + h + thf Confidence Level: 2 genes: LOCUS:BPLAN_158#ABBREVIATION:purN#ECNUMBERS:2.1.2.2# proteins: NAME:phosphoribosylglycinamide formytransferase#ABBREVIATION:PurN# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_158)
reversible: false
product: 741385
fast: false
reactant: 741360
reactant: 741373

543867
value: 999999.0
type: LocalParameter

539595
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-Acetyl-D-glucosamine 1-phosphate_C8H14NO9P
type: Species

748439
stoichiometry: 1.0
species: 539779
type: SpeciesReference

541639
value: 0.0
type: LocalParameter

543132
value: 999999.0
type: LocalParameter

540226
reactant: 730801
reversible: false
product: 730825
name: _2-aceto-2-hydroxybutanoate synthase
kinetic law: 730838
type: Reaction
product: 730813
reactant: 730789
fast: false
reactant: 730777
notes: Abbreviation: R_ACHBS Synonyms: _0 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 2obut + h + pyr --> 2ahbut + co2 Confidence Level: 2 JLR- I think the EC is 4.1.3.18 genes: LOCUS:BPLAN_084#ABBREVIATION:ilvI#ECNUMBERS:2.2.1.6# LOCUS:BPLAN_085#ABBREVIATION:ilvH#ECNUMBERS:2.2.1.6# proteins: NAME:acetolactate synthase III#ABBREVIATION:IlvHI# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_085 and BPLAN_084)

542110
value: 0.0
type: LocalParameter

540012
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O-Phospho-4-hydroxy-L-threonine_C4H8NO7P
type: Species

747608
stoichiometry: 1.0
species: 539779
type: SpeciesReference

542181
value: 0.0
type: LocalParameter

733590
stoichiometry: 1.0
species: 539659
type: SpeciesReference

734362
stoichiometry: 0.054
species: 540094
type: SpeciesReference

754280
stoichiometry: 1.0
species: 539638
type: SpeciesReference

540092
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Oxidized thioredoxin_X
type: Species

731573
stoichiometry: 1.0
species: 539754
type: SpeciesReference

744801
stoichiometry: 1.0
species: 539659
type: SpeciesReference

745321
stoichiometry: 1.0
species: 539783
type: SpeciesReference

732348
stoichiometry: 1.0
species: 539964
type: SpeciesReference

543206
value: 0.0
type: LocalParameter

745297
stoichiometry: 1.0
species: 539941
type: SpeciesReference

746712
stoichiometry: 1.0
species: 539784
type: SpeciesReference

736494
stoichiometry: 1.0
species: 539611
type: SpeciesReference

733651
stoichiometry: 1.0
species: 539784
type: SpeciesReference

541636
value: 0.0
type: LocalParameter

540736
fast: false
product: 741481
notes: Abbreviation: R_GCALDD Synonyms: _0 EC Number: 1.2.1.21 SUBSYSTEM: Folate Metabolism Equation: [c] : gcald + h2o + nad --> glyclt + (2) h + nadh Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
name: Glycolaldehyde dehydrogenase
reactant: 741445
type: Reaction
product: 741493
kinetic law: 741506
product: 741469
reactant: 741433
reactant: 741457
reversible: false

542253
value: 0.0
type: LocalParameter

541523
value: 0.0
type: LocalParameter

541588
value: 0.0
type: LocalParameter

753324
stoichiometry: 1.0
species: 540093
type: SpeciesReference

542517
value: 0.0
type: LocalParameter

539592
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-Acetyl-L-glutamyl 5-phosphate_C7H9NO8P
type: Species

540011
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Phenylpyruvate_C9H7O3
type: Species

749671
stoichiometry: 1.0
species: 540038
type: SpeciesReference

540093
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Reduced thioredoxin_XH2
type: Species

743576
stoichiometry: 1.0
species: 539756
type: SpeciesReference

748586
stoichiometry: 1.0
species: 539779
type: SpeciesReference

741737
stoichiometry: 1.0
species: 539760
type: SpeciesReference

543134
value: 0.0
type: LocalParameter

543207
value: 0.0
type: LocalParameter

540817
product: 743304
reversible: false
notes: Abbreviation: R_HSDy Synonyms: _0 EC Number: 1.1.1.3 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : aspsa + h + nadph --> hom-L + nadp Confidence Level: 2 genes: LOCUS:BPLAN_138#ABBREVIATION:thrA#ECNUMBERS:2.7.2.4,-!-,1.1.1.3# proteins: NAME:Homoserine dehydrogenase#ABBREVIATION:MetL# NAME:Aspartate kinase I#ABBREVIATION:ThrA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_138)
product: 743316
reactant: 743280
fast: false
reactant: 743268
type: Reaction
kinetic law: 743329
reactant: 743292
name: homoserine dehydrogenase (NADPH)

743341
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543284
value: 0.0
type: LocalParameter

539502
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate_C7H10O10P
type: Species

541637
value: 999999.0
type: LocalParameter

745549
stoichiometry: 1.0
species: 539779
type: SpeciesReference

743074
stoichiometry: 1.0
species: 539779
type: SpeciesReference

541587
value: 0.0
type: LocalParameter

541524
value: 0.0
type: LocalParameter

539593
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-Acetyl-L-glutamate 5-semialdehyde_C7H10NO4
type: Species

540010
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O-Phospho-L-homoserine_C4H8NO6P
type: Species

540880
kinetic law: 744777
type: Reaction
product: 744740
product: 744753
reactant: 744715
fast: false
reactant: 744691
reactant: 744703
reversible: false
notes: Abbreviation: R_KAS16 Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : ddcaACP + (2) h + malACP + nadph --> 3hmrsACP + ACP + co2 + nadp Confidence Level: 2 JLR- takes C12:0-ACP fatty acid part way through the elongation cycle. genes: LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_555) and (BPLAN_576)
name: _3-hydroxy-myristoyl-ACP synthesis
reactant: 744679
product: 744765
product: 744728

543869
value: 0.0
type: LocalParameter

542518
value: 0.0
type: LocalParameter

539618
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Amino-1-(5-Phospho-D-ribosyl)imidazole-4-carboxamide_C9H13N4O8P
type: Species

541372
reactant: 755665
type: Reaction
reactant: 755652
fast: false
reversible: false
product: 755703
kinetic law: 755715
notes: Abbreviation: R_TRPS1 Synonyms: _0 EC Number: 4.2.1.20 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 3ig3p + ser-L --> g3p + h2o + trp-L Confidence Level: 2 genes: LOCUS:BPLAN_214#ABBREVIATION:trpA#ECNUMBERS:4.2.1.20# LOCUS:BPLAN_215#ABBREVIATION:trpB#ECNUMBERS:4.2.1.20# proteins: NAME:Tryptophan synthase#ABBREVIATION:TrpA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_214 and BPLAN_215)
name: tryptophan synthase (indoleglycerol phosphate)
product: 755691
product: 755679

738063
stoichiometry: 1.0
species: 539710
type: SpeciesReference

755355
stoichiometry: 1.0
species: 540091
type: SpeciesReference

540481
notes: Abbreviation: R_DHFR Synonyms: _0 EC Number: 1.5.1.3 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : dhf + h + nadph <==> nadp + thf Confidence Level: 2 The enzyme from animals and some micro-organisms also slowly reduces folate to 5,6,7,8-tetrahydrofolate genes: LOCUS:BPLAN_191#ABBREVIATION:folA#ECNUMBERS:1.5.1.3# proteins: NAME:dihydrofolate reductase#ABBREVIATION:FolA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_191)
reversible: true
reactant: 737279
reactant: 737291
name: dihydrofolate reductase
kinetic law: 737339
reactant: 737303
product: 737315
type: Reaction
fast: false
product: 737327

750167
stoichiometry: 1.0
species: 539540
type: SpeciesReference

542113
value: 999999.0
type: LocalParameter

542259
value: 0.0
type: LocalParameter

540094
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Tryptophan_C11H12N2O2
type: Species

730618
stoichiometry: 1.0
species: 540013
type: SpeciesReference

540017
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Porphobilinogen_C10H13N2O4
type: Species

540730
type: Reaction
kinetic law: 741348
reactant: 741274
reversible: true
name: glyceraldehyde-3-phosphate dehydrogenase
reactant: 741299
reactant: 741286
fast: false
product: 741323
product: 741311
notes: Abbreviation: R_GAPD Synonyms: _0 EC Number: 1.2.1.12 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : g3p + nad + pi <==> 13dpg + h + nadh Confidence Level: 2 SMP genes: LOCUS:BPLAN_590#ABBREVIATION:gapA#ECNUMBERS:1.2.1.12# proteins: NAME:glyceraldehyde-3-phosphate dehydrogenase A#ABBREVIATION:GapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_590)
product: 741335

752019
stoichiometry: 1.0
species: 539760
type: SpeciesReference

540883
reactant: 744801
name: ketohexokinase
type: Reaction
kinetic law: 744850
product: 744826
reactant: 744789
fast: false
product: 744813
product: 744838
notes: Abbreviation: R_KHK Synonyms: _0 EC Number: 2.7.1.3 SUBSYSTEM: Fructose and Mannose Metabolism Equation: [c] : atp + fru --> adp + f1p + h Confidence Level: 2 genes: LOCUS:BPLAN_006#ECNUMBERS:2.7.1.-# proteins: NAME:carbohydrate kinase citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_006)
reversible: false

754848
stoichiometry: 1.0
species: 540084
type: SpeciesReference

544044
value: 0.0
type: LocalParameter

543353
value: 0.0
type: LocalParameter

742391
stoichiometry: 1.0
species: 540125
type: SpeciesReference

542511
value: 0.0
type: LocalParameter

541977
value: 0.0
type: LocalParameter

756948
stoichiometry: 1.0
species: 540114
type: SpeciesReference

539504
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Demethylmenaquinone 8_C50H70O2
type: Species

543354
value: 0.0
type: LocalParameter

739353
stoichiometry: 1.0
species: 539769
type: SpeciesReference

743819
stoichiometry: 1.0
species: 539611
type: SpeciesReference

737111
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543209
value: 999999.0
type: LocalParameter

540095
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Tryptophan_C11H12N2O2
type: Species

750375
stoichiometry: 1.0
species: 539564
type: SpeciesReference

542032
value: 0.0
type: LocalParameter

541585
value: 0.0
type: LocalParameter

541799
value: 999999.0
type: LocalParameter

736410
stoichiometry: 1.0
species: 539783
type: SpeciesReference

541522
value: 0.0
type: LocalParameter

540016
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: (R)-Pantothenate_C9H16NO5
type: Species

540811
fast: false
product: 743171
reversible: false
product: 743159
reactant: 743135
kinetic law: 743183
reactant: 743147
type: Reaction
notes: Abbreviation: R_HMBS Synonyms: _0 EC Number: 4.3.1.8 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : h2o + (4) ppbng --> hmbil + (4) nh4 Confidence Level: 2 genes: LOCUS:BPLAN_067#ABBREVIATION:hemC#ECNUMBERS:4.3.1.8# proteins: NAME:Hydroxymethylbilane synthase#ABBREVIATION:HemC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_067)
name: hydroxymethylbilane synthase

734690
stoichiometry: 12.0
species: 539969
type: SpeciesReference

730569
stoichiometry: 1.0
species: 539785
type: SpeciesReference

539599
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N2-Acetyl-L-ornithine_C7H14N2O3
type: Species

740573
stoichiometry: 1.0
species: 540013
type: SpeciesReference

542512
value: 0.0
type: LocalParameter

541978
value: 999999.0
type: LocalParameter

735514
stoichiometry: 1.0
species: 539671
type: SpeciesReference

540096
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Tyrosine_C9H11NO3
type: Species

739173
stoichiometry: 1.0
species: 539748
type: SpeciesReference

541471
value: 0.0
type: LocalParameter

757093
stoichiometry: 2.0
species: 539970
type: SpeciesReference

750227
stoichiometry: 1.0
species: 540007
type: SpeciesReference

542257
value: 999999.0
type: LocalParameter

739438
stoichiometry: 1.0
species: 540151
type: SpeciesReference

540015
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (R)-Pantothenate_C9H16NO5
type: Species

731947
stoichiometry: 1.0
species: 540034
type: SpeciesReference

735187
stoichiometry: 7.0
species: 539601
type: SpeciesReference

541584
value: 999999.0
type: LocalParameter

542031
value: 0.0
type: LocalParameter

541798
value: 0.0
type: LocalParameter

540967
reactant: 746833
type: Reaction
kinetic law: 746881
name: nucleoside-diphosphate kinase (ATP:UDP)
product: 746869
product: 746857
fast: false
notes: Abbreviation: R_NDPK2 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + udp <==> adp + utp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
reactant: 746845
reversible: true

544042
value: 999999.0
type: LocalParameter

754908
stoichiometry: 1.0
species: 539611
type: SpeciesReference

540229
fast: false
name: acetolactate synthase
kinetic law: 730898
reactant: 730850
notes: Abbreviation: R_ACLS Synonyms: _0 EC Number: 4.1.3.18 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : h + (2) pyr --> alac-S + co2 Confidence Level: 2 A flavoprotein. Requires thiamine diphosphate; also catalyses the formation of 2-aceto-2-hydroxybutanoate (see ACHBS) Also EC 2.2.1.6 - NCD genes: LOCUS:BPLAN_084#ABBREVIATION:ilvI#ECNUMBERS:2.2.1.6# LOCUS:BPLAN_085#ABBREVIATION:ilvH#ECNUMBERS:2.2.1.6# proteins: NAME:acetolactate synthase III#ABBREVIATION:IlvHI# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_085 and BPLAN_084)
reversible: false
type: Reaction
reactant: 730862
product: 730886
product: 730874

539506
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Demethylmenaquinol 8_C50H72O2
type: Species

543288
value: 0.0
type: LocalParameter

543356
value: 999999.0
type: LocalParameter

738460
stoichiometry: 1.0
species: 539725
type: SpeciesReference

744509
stoichiometry: 1.0
species: 539588
type: SpeciesReference

542112
value: -999999.0
type: LocalParameter

540097
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Tyrosine_C9H11NO3
type: Species

542256
value: 0.0
type: LocalParameter

732092
stoichiometry: 1.0
species: 539609
type: SpeciesReference

540014
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Phosphate_HO4P
type: Species

749586
stoichiometry: 0.72
species: 540000
type: SpeciesReference

735259
stoichiometry: 2.0
species: 539778
type: SpeciesReference

541520
value: 999999.0
type: LocalParameter

543130
value: 0.0
type: LocalParameter

541976
value: 0.0
type: LocalParameter

539597
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-Acetyl-L-glutamate_C7H9NO5
type: Species

542514
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type: LocalParameter

755511
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species: 539969
type: SpeciesReference

730994
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species: 539584
type: SpeciesReference

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type: LocalParameter

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type: LocalParameter

542520
value: 0.0
type: LocalParameter

540008
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Phenylalanine_C9H11NO2
type: Species

543927
value: 0.0
type: LocalParameter

747548
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species: 539722
type: SpeciesReference

541530
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type: LocalParameter

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species: 539942
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species: 539628
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541744
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type: LocalParameter

539920
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: IMP_C10H11N4O8P
type: Species

731343
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species: 539970
type: SpeciesReference

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stoichiometry: 1.0
species: 539783
type: SpeciesReference

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741992
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542733
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735320
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species: 539756
type: SpeciesReference

743135
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species: 539779
type: SpeciesReference

543928
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540098
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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type: Species

542037
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543799
value: 0.0
type: LocalParameter

752226
stoichiometry: 1.0
species: 540001
type: SpeciesReference

543139
value: 999999.0
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752455
stoichiometry: 1.0
species: 539700
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543706
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738931
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species: 540135
type: SpeciesReference

543069
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539720
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dTTP_C10H13N2O14P3
type: Species

543066
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type: LocalParameter

541855
value: 0.0
type: LocalParameter

745117
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species: 539611
type: SpeciesReference

541742
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species: 539647
type: SpeciesReference

539922
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Indole_C8H7N
type: Species

542976
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type: LocalParameter

540964
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kinetic law: 746821
reactant: 746784
product: 746797
fast: false
type: Reaction
product: 746809
name: nucleoside-diphosphate kinase (ATP:GDP)
reactant: 746772
notes: Abbreviation: R_NDPK1 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + gdp <==> adp + gtp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)

542736
value: 0.0
type: LocalParameter

540006
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Peptidoglycan subunit of Blattabacterium Periplaneta americana_C40H62N8O21
type: Species

734146
stoichiometry: 0.276
species: 539914
type: SpeciesReference

731247
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species: 539779
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744449
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species: 539783
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747040
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species: 539611
type: SpeciesReference

736073
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species: 539953
type: SpeciesReference

745816
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species: 539967
type: SpeciesReference

542034
value: 0.0
type: LocalParameter

540007
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Phenylalanine_C9H11NO2
type: Species

740923
stoichiometry: 1.0
species: 539611
type: SpeciesReference

740369
stoichiometry: 1.0
species: 540118
type: SpeciesReference

542521
value: 999999.0
type: LocalParameter

543351
value: 0.0
type: LocalParameter

543872
value: 0.0
type: LocalParameter

541156
reactant: 750859
type: Reaction
reversible: false
product: 750907
product: 750931
notes: Abbreviation: R_PPNCL2 Synonyms: _0 EC Number: 6.3.2.5 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 4ppan + ctp + cys-L --> 4ppcys + cmp + h + ppi Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
product: 750919
fast: false
reactant: 750883
reactant: 750871
name: phosphopantothenate-cysteine ligase
product: 750895
kinetic law: 750943

543067
value: 0.0
type: LocalParameter

739209
stoichiometry: 1.0
species: 539757
type: SpeciesReference

539721
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dUDP_C9H11N2O11P2
type: Species

754788
stoichiometry: 1.0
species: 539779
type: SpeciesReference

733179
stoichiometry: 1.0
species: 539783
type: SpeciesReference

541741
value: 0.0
type: LocalParameter

747728
stoichiometry: 1.0
species: 539779
type: SpeciesReference

542735
value: 999999.0
type: LocalParameter

543797
value: 999999.0
type: LocalParameter

750725
stoichiometry: 1.0
species: 539558
type: SpeciesReference

751210
stoichiometry: 1.0
species: 539752
type: SpeciesReference

746023
stoichiometry: 1.0
species: 539961
type: SpeciesReference

738123
stoichiometry: 1.0
species: 539717
type: SpeciesReference

542035
value: 999999.0
type: LocalParameter

748367
stoichiometry: 1.0
species: 539779
type: SpeciesReference

746797
stoichiometry: 1.0
species: 539611
type: SpeciesReference

751959
stoichiometry: 0.02
species: 540032
type: SpeciesReference

755587
stoichiometry: 1.0
species: 539764
type: SpeciesReference

543708
value: 0.0
type: LocalParameter

737874
stoichiometry: 1.0
species: 539528
type: SpeciesReference

732610
stoichiometry: 1.0
species: 539784
type: SpeciesReference

542250
value: -999999.0
type: LocalParameter

542974
value: 999999.0
type: LocalParameter

543923
value: 999999.0
type: LocalParameter

539924
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Inosine_C10H12N4O5
type: Species

539722
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dUMP_C9H11N2O8P
type: Species

542730
value: 0.0
type: LocalParameter

757009
stoichiometry: 1.0
species: 539779
type: SpeciesReference

737775
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543136
value: 0.0
type: LocalParameter

541153
reactant: 750799
name: phosphoenolpyruvate carboxykinase
type: Reaction
notes: Abbreviation: R_PPCK Synonyms: _0 EC Number: 4.1.1.49 SUBSYSTEM: Anaplerotic reactions Equation: [c] : atp + oaa --> adp + co2 + pep Confidence Level: 2 genes: LOCUS:BPLAN_557#ABBREVIATION:pck#ECNUMBERS:4.1.1.49# proteins: NAME:phosphoenolpyruvate carboxykinase#ABBREVIATION:Pck# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_557)
fast: false
product: 750823
kinetic law: 750847
product: 750835
product: 750811
reversible: false
reactant: 750786

541690
value: 0.0
type: LocalParameter

542332
value: 0.0
type: LocalParameter

539590
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Acetyl-CoA_C23H34N7O17P3S
type: Species

738616
stoichiometry: 1.0
species: 539779
type: SpeciesReference

734484
stoichiometry: 1.0
species: 540002
type: SpeciesReference

542251
value: 999999.0
type: LocalParameter

750592
stoichiometry: 1.0
species: 539958
type: SpeciesReference

540235
product: 731006
reversible: false
product: 730994
fast: false
type: Reaction
reactant: 730970
kinetic law: 731018
name: acetylornithine deacetylase
reactant: 730982
notes: Abbreviation: R_ACODA Synonyms: _0 EC Number: 3.5.1.16 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : acorn + h2o --> ac + orn Confidence Level: 2 genes: LOCUS:BPLAN_320#ABBREVIATION:argE#ECNUMBERS:3.5.1.16# proteins: NAME:acetylornithine deacetylase#ABBREVIATION:ArgE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_320)

755137
stoichiometry: 1.0
species: 539727
type: SpeciesReference

540961
reactant: 746724
reactant: 746712
fast: false
kinetic law: 746760
reversible: true
type: Reaction
product: 746748
product: 746736
name: sodium proton antiporter (H:NA is 1:1)
notes: Abbreviation: R_NAt3_1 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + na1[c] <==> h[c] + na1[e] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:

543874
value: 999999.0
type: LocalParameter

750447
stoichiometry: 1.0
species: 539659
type: SpeciesReference

754993
stoichiometry: 1.0
species: 539970
type: SpeciesReference

541691
value: 999999.0
type: LocalParameter

542331
value: 0.0
type: LocalParameter

543925
value: 0.0
type: LocalParameter

539926
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Isopentenyl diphosphate_C5H9O7P2
type: Species

541579
value: 0.0
type: LocalParameter

755017
stoichiometry: 1.0
species: 539779
type: SpeciesReference

540232
kinetic law: 730958
type: Reaction
notes: Abbreviation: R_ACOATA Synonyms: _0 EC Number: 2.3.1.38 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : ACP + accoa --> acACP + coa Confidence Level: 2 tvrxn is now charge balanced; removed h - NCD genes: LOCUS:BPLAN_524#ABBREVIATION:fabH#ECNUMBERS:2.3.1.41# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase#ABBREVIATION:FabH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_524)
name: Acetyl-CoA ACP transacylase
reversible: false
reactant: 730922
product: 730946
product: 730934
fast: false
reactant: 730910

542972
value: -999999.0
type: LocalParameter

542732
value: 0.0
type: LocalParameter

541859
value: 999999.0
type: LocalParameter

730789
stoichiometry: 1.0
species: 539783
type: SpeciesReference

539510
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Isopropylmaleate_C7H8O4
type: Species

540739
product: 741542
type: Reaction
fast: false
reactant: 741530
reactant: 741518
product: 741555
name: glutamine-fructose-6-phosphate transaminase
kinetic law: 741567
notes: Abbreviation: R_GF6PTA Synonyms: _0 EC Number: 2.6.1.16 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : f6p + gln-L --> gam6p + glu-L Confidence Level: 2 genes: LOCUS:BPLAN_351#ABBREVIATION:glmS#ECNUMBERS:2.6.1.16# proteins: NAME:Glucosamine fructose-6-phosphate aminotransferase (isomerizing)#ABBREVIATION:GlmS# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_351)
reversible: false

754353
stoichiometry: 1.0
species: 540075
type: SpeciesReference

539724
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Deoxyuridine_C9H12N2O5
type: Species

751438
stoichiometry: 1.0
species: 539653
type: SpeciesReference

542038
value: 0.0
type: LocalParameter

542971
value: 0.0
type: LocalParameter

734751
stoichiometry: 12.0
species: 539967
type: SpeciesReference

539927
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: ITP_C10H11N4O14P3
type: Species

730777
stoichiometry: 1.0
species: 539512
type: SpeciesReference

541858
value: 0.0
type: LocalParameter

754207
stoichiometry: 1.0
species: 539778
type: SpeciesReference

543876
value: 0.0
type: LocalParameter

748500
stoichiometry: 1.0
species: 539689
type: SpeciesReference

539725
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dUTP_C9H11N2O14P3
type: Species

739583
stoichiometry: 1.0
species: 540155
type: SpeciesReference

732426
stoichiometry: 1.0
species: 539784
type: SpeciesReference

543137
value: 0.0
type: LocalParameter

756260
stoichiometry: 1.0
species: 540121
type: SpeciesReference

745755
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543647
value: 0.0
type: LocalParameter

756152
stoichiometry: 1.0
species: 540098
type: SpeciesReference

734969
stoichiometry: 7.0
species: 539779
type: SpeciesReference

737087
stoichiometry: 1.0
species: 539488
type: SpeciesReference

749961
stoichiometry: 1.0
species: 539989
type: SpeciesReference

745441
stoichiometry: 1.0
species: 539659
type: SpeciesReference

755245
stoichiometry: 1.0
species: 539783
type: SpeciesReference

539726
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _1-deoxy-D-xylulose 5-phosphate_C5H9O7P
type: Species

742271
stoichiometry: 1.0
species: 539611
type: SpeciesReference

735685
stoichiometry: 1.0
species: 539659
type: SpeciesReference

542621
value: -999999.0
type: LocalParameter

543060
value: 0.0
type: LocalParameter

543984
value: 0.0
type: LocalParameter

543792
value: 0.0
type: LocalParameter

541694
value: 0.0
type: LocalParameter

540343
name: argininosuccinate synthase
reactant: 733361
fast: false
reversible: false
product: 733385
reactant: 733349
product: 733373
product: 733409
type: Reaction
kinetic law: 733421
notes: Abbreviation: R_ARGSS Synonyms: _0 EC Number: 6.3.4.5 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : asp-L + atp + citr-L --> amp + argsuc + h + ppi Confidence Level: 2 genes: LOCUS:BPLAN_327#ABBREVIATION:argG#ECNUMBERS:6.3.4.5# proteins: NAME:argininosuccinate synthetase#ABBREVIATION:ArgG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_327)
reactant: 733337
product: 733397

733023
stoichiometry: 1.0
species: 539969
type: SpeciesReference

542335
value: 999999.0
type: LocalParameter

753252
stoichiometry: 1.0
species: 540093
type: SpeciesReference

741639
stoichiometry: 1.0
species: 539659
type: SpeciesReference

747692
stoichiometry: 1.0
species: 539924
type: SpeciesReference

735734
stoichiometry: 1.0
species: 539611
type: SpeciesReference

539727
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Erythrose 4-phosphate_C4H7O7P
type: Species

542620
value: 0.0
type: LocalParameter

543920
value: 0.0
type: LocalParameter

541045
type: Reaction
product: 748463
notes: Abbreviation: R_NTPP4 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : ctp + h2o --> cmp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
product: 748476
reactant: 748439
reactant: 748427
name: Nucleoside triphosphate pyrophosphorylase (ctp)
kinetic law: 748488
product: 748451
reversible: false
fast: false

543983
value: 0.0
type: LocalParameter

736784
stoichiometry: 1.0
species: 539779
type: SpeciesReference

747945
stoichiometry: 1.0
species: 540091
type: SpeciesReference

744388
stoichiometry: 1.0
species: 539969
type: SpeciesReference

735807
stoichiometry: 1.0
species: 539659
type: SpeciesReference

542334
value: -999999.0
type: LocalParameter

748852
stoichiometry: 1.0
species: 539776
type: SpeciesReference

756477
stoichiometry: 1.0
species: 539628
type: SpeciesReference

748865
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543645
value: 0.0
type: LocalParameter

543498
value: 0.0
type: LocalParameter

541042
fast: false
notes: Abbreviation: R_NTPP3 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dctp + h2o --> dcmp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
product: 748391
reactant: 748367
product: 748403
product: 748379
type: Reaction
kinetic law: 748415
reactant: 748355
name: Nucleoside triphosphate pyrophosphorylase (dctp)
reversible: false

742416
stoichiometry: 1.0
species: 539760
type: SpeciesReference

753687
stoichiometry: 1.0
species: 539673
type: SpeciesReference

754122
stoichiometry: 1.0
species: 540079
type: SpeciesReference

539728
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate_C6H9N2O6P
type: Species

732285
stoichiometry: 1.0
species: 539568
type: SpeciesReference

540119
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Uridine_C9H12N2O6
type: Species

542623
value: 999999.0
type: LocalParameter

543921
value: 0.0
type: LocalParameter

543986
value: 999999.0
type: LocalParameter

540478
fast: false
type: Reaction
notes: Abbreviation: R_DHDPS Synonyms: _0 EC Number: 4.2.1.52 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : aspsa + pyr --> 23dhdp + h + (2) h2o Confidence Level: 2 genes: LOCUS:BPLAN_426#ABBREVIATION:dapA#ECNUMBERS:4.2.1.52# proteins: NAME:Dihydrodipicolinate synthetase#ABBREVIATION:DapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_426)
name: dihydrodipicolinate synthase
reactant: 737207
reactant: 737219
product: 737231
product: 737255
kinetic law: 737267
reversible: false
product: 737243

745961
stoichiometry: 1.0
species: 539779
type: SpeciesReference

732598
stoichiometry: 1.0
species: 539630
type: SpeciesReference

543790
value: 999999.0
type: LocalParameter

751546
stoichiometry: 1.0
species: 539783
type: SpeciesReference

734811
stoichiometry: 11.0
species: 539969
type: SpeciesReference

733227
stoichiometry: 1.0
species: 539643
type: SpeciesReference

737667
stoichiometry: 1.0
species: 539492
type: SpeciesReference

539729
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Fructose 1-phosphate_C6H11O9P
type: Species

750665
stoichiometry: 2.0
species: 540013
type: SpeciesReference

539620
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-amino-1-(5-phospho-D-ribosyl)imidazole_C8H12N3O7P
type: Species

748125
stoichiometry: 1.0
species: 540013
type: SpeciesReference

748914
stoichiometry: 1.0
species: 539980
type: SpeciesReference

741591
stoichiometry: 1.0
species: 539772
type: SpeciesReference

541693
value: 0.0
type: LocalParameter

732502
stoichiometry: 1.0
species: 539611
type: SpeciesReference

543701
value: 0.0
type: LocalParameter

543643
value: 999999.0
type: LocalParameter

542738
value: 0.0
type: LocalParameter

543570
value: 0.0
type: LocalParameter

541853
value: 999999.0
type: LocalParameter

541748
value: 0.0
type: LocalParameter

543064
value: 0.0
type: LocalParameter

541048
kinetic law: 748562
product: 748549
reactant: 748512
type: Reaction
reversible: false
product: 748536
notes: Abbreviation: R_NTPP5 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : datp + h2o --> damp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
product: 748524
reactant: 748500
name: Nucleoside triphosphate pyrophosphorylase (datp)
fast: false

540117
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Urea_CH4N2O
type: Species

542493
value: 0.0
type: LocalParameter

733735
stoichiometry: 1.0
species: 539986
type: SpeciesReference

731451
stoichiometry: 1.0
species: 539546
type: SpeciesReference

543795
value: -999999.0
type: LocalParameter

747196
stoichiometry: 1.0
species: 539659
type: SpeciesReference

540670
kinetic law: 740249
product: 740237
reactant: 740225
notes: Abbreviation: R_EX_thm_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : thm <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Thiamin exchange
type: Reaction

540340
kinetic law: 733325
product: 733313
product: 733300
reactant: 733288
notes: Abbreviation: R_ARGSL Synonyms: _0 EC Number: 4.3.2.1 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : argsuc --> arg-L + fum Confidence Level: 2 genes: LOCUS:BPLAN_276#ABBREVIATION:argH#ECNUMBERS:4.3.2.1# proteins: NAME:argininosuccinate lyase#ABBREVIATION:ArgH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_276)
fast: false
reversible: false
name: argininosuccinate lyase
type: Reaction

751174
stoichiometry: 1.0
species: 539762
type: SpeciesReference

734532
stoichiometry: 1.0
species: 539605
type: SpeciesReference

541699
value: 0.0
type: LocalParameter

749478
stoichiometry: 1.0
species: 540109
type: SpeciesReference

541852
value: -999999.0
type: LocalParameter

541747
value: 0.0
type: LocalParameter

542624
value: 0.0
type: LocalParameter

540118
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Urea_CH4N2O
type: Species

542410
value: 0.0
type: LocalParameter

542490
value: -999999.0
type: LocalParameter

543703
value: 0.0
type: LocalParameter

543419
value: 999999.0
type: LocalParameter

543641
value: 0.0
type: LocalParameter

543794
value: 0.0
type: LocalParameter

748282
stoichiometry: 1.0
species: 539776
type: SpeciesReference

542338
value: 0.0
type: LocalParameter

736182
stoichiometry: 1.0
species: 540119
type: SpeciesReference

540115
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Uroporphyrinogen III_C40H36N4O16
type: Species

734037
stoichiometry: 0.014
species: 539701
type: SpeciesReference

541696
value: 0.0
type: LocalParameter

542627
value: -999999.0
type: LocalParameter

742187
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543062
value: 999999.0
type: LocalParameter

541159
fast: false
reactant: 750967
product: 751003
reversible: false
notes: Abbreviation: R_PPND Synonyms: _0 EC Number: 1.3.1.12 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : nad + pphn --> 34hpp + co2 + nadh Confidence Level: 2 genes: LOCUS:BPLAN_297#ABBREVIATION:tyrA#ECNUMBERS:5.4.99.5,-!-,1.3.1.12# proteins: NAME:Chorismate mutase T#ABBREVIATION:TyrA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_297)
product: 750991
kinetic law: 751015
type: Reaction
product: 750979
name: prephenate dehydrogenase
reactant: 750955

542413
value: 999999.0
type: LocalParameter

543704
value: 0.0
type: LocalParameter

744958
stoichiometry: 1.0
species: 539611
type: SpeciesReference

542491
value: 999999.0
type: LocalParameter

756720
stoichiometry: 1.0
species: 539743
type: SpeciesReference

754002
stoichiometry: 1.0
species: 539967
type: SpeciesReference

745177
stoichiometry: 2.0
species: 539784
type: SpeciesReference

737003
stoichiometry: 1.0
species: 539611
type: SpeciesReference

543640
value: 0.0
type: LocalParameter

744655
stoichiometry: 1.0
species: 539677
type: SpeciesReference

542337
value: 0.0
type: LocalParameter

542739
value: -999999.0
type: LocalParameter

541697
value: 999999.0
type: LocalParameter

731139
stoichiometry: 1.0
species: 540002
type: SpeciesReference

755739
stoichiometry: 1.0
species: 540056
type: SpeciesReference

541850
value: 0.0
type: LocalParameter

542626
value: 0.0
type: LocalParameter

540116
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Uracil_C4H4N2O2
type: Species

741034
stoichiometry: 2.0
species: 539784
type: SpeciesReference

543981
value: 0.0
type: LocalParameter

542412
value: -999999.0
type: LocalParameter

541745
value: 999999.0
type: LocalParameter

542979
value: -999999.0
type: LocalParameter

540136
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: CO2_CO2
type: Species

542416
value: 0.0
type: LocalParameter

541519
value: -999999.0
type: LocalParameter

541907
value: 999999.0
type: LocalParameter

750871
stoichiometry: 1.0
species: 539681
type: SpeciesReference

752927
stoichiometry: 1.0
species: 540039
type: SpeciesReference

753736
stoichiometry: 1.0
species: 540056
type: SpeciesReference

539628
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Alanine_C3H7NO2
type: Species

756381
stoichiometry: 1.0
species: 539659
type: SpeciesReference

738580
stoichiometry: 1.0
species: 539726
type: SpeciesReference

542317
value: 0.0
type: LocalParameter

744874
stoichiometry: 1.0
species: 539931
type: SpeciesReference

542103
value: 0.0
type: LocalParameter

743207
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543414
value: 0.0
type: LocalParameter

540135
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Aspartate_C4H6NO4
type: Species

752890
stoichiometry: 1.0
species: 540037
type: SpeciesReference

748659
stoichiometry: 1.0
species: 539779
type: SpeciesReference

731849
stoichiometry: 1.0
species: 539920
type: SpeciesReference

540673
kinetic law: 740285
product: 740273
reactant: 740261
notes: Abbreviation: R_EX_thr_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : thr-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Threonine exchange
type: Reaction

541486
value: 0.0
type: LocalParameter

541984
value: 999999.0
type: LocalParameter

541369
name: triokinase
product: 755626
reactant: 755574
reversible: false
kinetic law: 755639
fast: false
product: 755613
type: Reaction
reactant: 755587
notes: Abbreviation: R_TRIOK Synonyms: _0 EC Number: 2.7.1.28 SUBSYSTEM: Fructose and Mannose Metabolism Equation: [c] : atp + glyald --> adp + g3p + h Confidence Level: 2 genes: LOCUS:BPLAN_181#ABBREVIATION:glpK#ECNUMBERS:2.7.1.28,-!-,2.7.1.30# proteins: NAME:glycerol kinase#ABBREVIATION:GlpK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_181)
product: 755600

540349
reactant: 733517
name: L-asparagine reversible transport via proton symport
product: 733553
reactant: 733529
product: 733541
type: Reaction
notes: Abbreviation: R_ASNt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: asn-L[e] + h[e] <==> asn-L[c] + h[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 733565
fast: false
reversible: true

541905
value: -999999.0
type: LocalParameter

544035
value: 999999.0
type: LocalParameter

543629
value: 999999.0
type: LocalParameter

738823
stoichiometry: 1.0
species: 540132
type: SpeciesReference

541591
value: 0.0
type: LocalParameter

542199
value: 0.0
type: LocalParameter

542104
value: 0.0
type: LocalParameter

543561
value: 0.0
type: LocalParameter

541985
value: 0.0
type: LocalParameter

541594
value: 0.0
type: LocalParameter

541489
value: 999999.0
type: LocalParameter

540138
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: (S)-Dihydroorotate_C5H5N2O4
type: Species

732067
stoichiometry: 1.0
species: 539615
type: SpeciesReference

736554
stoichiometry: 1.0
species: 539673
type: SpeciesReference

540529
reactant: 738339
type: Reaction
product: 738375
name: deoxyuridine kinase (ATP:Deoxyuridine)
reversible: false
reactant: 738327
product: 738351
kinetic law: 738387
notes: Abbreviation: R_DURIK1 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + duri --> adp + dump + h Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
product: 738363

541904
value: 0.0
type: LocalParameter

743280
stoichiometry: 1.0
species: 539783
type: SpeciesReference

756597
stoichiometry: 1.0
species: 540102
type: SpeciesReference

542319
value: 0.0
type: LocalParameter

752816
stoichiometry: 1.0
species: 539783
type: SpeciesReference

539626
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Alanine_C3H7NO2
type: Species

749732
stoichiometry: 1.0
species: 539977
type: SpeciesReference

741530
stoichiometry: 1.0
species: 539756
type: SpeciesReference

543416
value: 0.0
type: LocalParameter

733977
stoichiometry: 6.0E-6
species: 539677
type: SpeciesReference

540472
kinetic law: 737123
product: 737111
product: 737099
reactant: 737087
notes: Abbreviation: R_DHAD2 Synonyms: _0 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 23dhmp --> 3mop + h2o Confidence Level: 2 genes: LOCUS:BPLAN_083#ABBREVIATION:ilvD#ECNUMBERS:4.2.1.9# proteins: NAME:dihidroxy acid dehydratase#ABBREVIATION:IlvD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_083)
fast: false
reversible: false
name: Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)
type: Reaction

540137
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Cysteine_C3H7NO2S
type: Species

540898
name: Malate transport via proton symport (2 H)
product: 745213
reactant: 745189
product: 745201
reversible: false
kinetic law: 745225
fast: false
type: Reaction
reactant: 745177
notes: Abbreviation: R_MALt2_2 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: (2) h[e] + mal-L[e] --> (2) h[c] + mal-L[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_282#ABBREVIATION:dctA# proteins: NAME:C4-dicarboxylate transporter#ABBREVIATION:DctA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_282)

541903
value: 0.0
type: LocalParameter

756513
stoichiometry: 1.0
species: 539611
type: SpeciesReference

542415
value: 0.0
type: LocalParameter

543417
value: 0.0
type: LocalParameter

544037
value: 0.0
type: LocalParameter

542106
value: 0.0
type: LocalParameter

743916
stoichiometry: 1.0
species: 539760
type: SpeciesReference

541593
value: 0.0
type: LocalParameter

750069
stoichiometry: 1.0
species: 539966
type: SpeciesReference

542642
value: 0.0
type: LocalParameter

740634
stoichiometry: 1.0
species: 539611
type: SpeciesReference

755932
stoichiometry: 1.0
species: 540096
type: SpeciesReference

541515
value: 999999.0
type: LocalParameter

541366
notes: Abbreviation: R_TRDR Synonyms: _0 EC Number: 1.8.1.9 SUBSYSTEM: Oxidative Phosphorylation Equation: [c] : h + nadph + trdox --> nadp + trdrd Confidence Level: 2 genes: LOCUS:BPLAN_588#ABBREVIATION:trxB#ECNUMBERS:1.8.1.9# proteins: NAME:Thioredoxin reductase#ABBREVIATION:TrxB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_588)
product: 755535
type: Reaction
fast: false
product: 755548
kinetic law: 755561
reactant: 755511
name: thioredoxin reductase (NADPH)
reversible: false
reactant: 755523
reactant: 755499

757117
stoichiometry: 1.0
species: 540118
type: SpeciesReference

539624
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: _2-Oxoglutarate_C5H4O5
type: Species

738703
stoichiometry: 1.0
species: 539779
type: SpeciesReference

540475
reversible: false
fast: false
name: dihydrodipicolinate reductase (NADPH)
notes: Abbreviation: R_DHDPRy Synonyms: _0 EC Number: 1.3.1.26 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : 23dhdp + h + nadph --> nadp + thdp Confidence Level: 2 genes: LOCUS:BPLAN_090#ABBREVIATION:dapB#ECNUMBERS:1.3.1.26# proteins: NAME:Dihydrodipicolinate reductase#ABBREVIATION:DapB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_090)
reactant: 737159
reactant: 737135
reactant: 737147
product: 737183
type: Reaction
product: 737171
kinetic law: 737195

542196
value: 0.0
type: LocalParameter

540676
kinetic law: 740321
product: 740309
reactant: 740297
notes: Abbreviation: R_EX_trp_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : trp-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Tryptophan exchange
type: Reaction

540346
name: aspartate-semialdehyde dehydrogenase
reactant: 733457
fast: false
product: 733469
reversible: false
reactant: 733433
product: 733481
kinetic law: 733505
reactant: 733445
product: 733493
type: Reaction
notes: Abbreviation: R_ASAD Synonyms: _0 EC Number: 1.2.1.11 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : 4pasp + h + nadph --> aspsa + nadp + pi Confidence Level: 2 genes: LOCUS:BPLAN_342#ABBREVIATION:asd#ECNUMBERS:1.2.1.11# proteins: NAME:Aspartate-semialdehyde dehydrogenase#ABBREVIATION:Asd# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_342)

540132
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Alanine_C3H7NO2
type: Species

540523
product: 738207
product: 738219
product: 738243
reversible: false
type: Reaction
name: diphosphomevalonate decarboxylase
product: 738231
notes: Abbreviation: R_DPMVDx Synonyms: _0 EC Number: 4.1.1.33 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : 5dpmev + atp --> adp + co2 + ipdp + pi Confidence Level: 2 genes: LOCUS:BPLAN_283#ABBREVIATION:mvaD#ECNUMBERS:4.1.1.33# proteins: NAME:diphosphomevalonate decarboxylase#ABBREVIATION:MvaD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_283)
reactant: 738183
reactant: 738195
fast: false
kinetic law: 738255

543563
value: 0.0
type: LocalParameter

543410
value: 0.0
type: LocalParameter

543624
value: 0.0
type: LocalParameter

747740
stoichiometry: 1.0
species: 540114
type: SpeciesReference

542107
value: 999999.0
type: LocalParameter

751971
stoichiometry: 1.0
species: 539673
type: SpeciesReference

751679
stoichiometry: 1.0
species: 539783
type: SpeciesReference

742103
stoichiometry: 1.0
species: 539952
type: SpeciesReference

743414
stoichiometry: 1.0
species: 539795
type: SpeciesReference

541901
value: 999999.0
type: LocalParameter

541516
value: 0.0
type: LocalParameter

735477
stoichiometry: 1.0
species: 539667
type: SpeciesReference

541621
value: 0.0
type: LocalParameter

541980
value: 0.0
type: LocalParameter

754644
stoichiometry: 1.0
species: 539749
type: SpeciesReference

540131
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: _2-Oxoglutarate_C5H4O5
type: Species

738339
stoichiometry: 1.0
species: 539724
type: SpeciesReference

745393
stoichiometry: 1.0
species: 539673
type: SpeciesReference

543564
value: -999999.0
type: LocalParameter

738267
stoichiometry: 1.0
species: 539659
type: SpeciesReference

746930
stoichiometry: 1.0
species: 539681
type: SpeciesReference

544039
value: 0.0
type: LocalParameter

541252
fast: false
reactant: 753047
type: Reaction
kinetic law: 753108
reactant: 753059
product: 753096
reversible: false
notes: Abbreviation: R_RBFSa Synonyms: _0 EC Number: 2.5.1.9 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 4r5au + db4p --> dmlz + (2) h2o + pi Confidence Level: 2 genes: LOCUS:BPLAN_558#ABBREVIATION:ribC#ECNUMBERS:2.5.1.9# proteins: NAME:_6,7-dimethyl-8-ribityllumazine synthase#ABBREVIATION:RibC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_558)
product: 753072
name: riboflavin synthase
product: 753084

755652
stoichiometry: 1.0
species: 539534
type: SpeciesReference

749889
stoichiometry: 1.0
species: 540013
type: SpeciesReference

731043
stoichiometry: 1.0
species: 539622
type: SpeciesReference

541255
kinetic law: 753156
product: 753144
product: 753132
reactant: 753120
notes: Abbreviation: R_RBFSb Synonyms: _0 EC Number: 2.5.1.9 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : (2) dmlz --> 4r5au + ribflv Confidence Level: 2 genes: LOCUS:BPLAN_094#ABBREVIATION:ribE#ECNUMBERS:2.5.1.9# proteins: NAME:riboflavin synthase#ABBREVIATION:RibH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_094)
fast: false
reversible: false
name: riboflavin synthase
type: Reaction

539622
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Oxoglutarate_C5H4O5
type: Species

751064
stoichiometry: 1.0
species: 539779
type: SpeciesReference

541900
value: 0.0
type: LocalParameter

540021
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Diphosphate_HO7P2
type: Species

755956
stoichiometry: 1.0
species: 539622
type: SpeciesReference

540134
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Asparagine_C4H8N2O3
type: Species

542418
value: 0.0
type: LocalParameter

746216
stoichiometry: 1.0
species: 539966
type: SpeciesReference

541622
value: 0.0
type: LocalParameter

734242
stoichiometry: 0.001935
species: 540004
type: SpeciesReference

756405
stoichiometry: 1.0
species: 540105
type: SpeciesReference

541981
value: 0.0
type: LocalParameter

543412
value: 999999.0
type: LocalParameter

541590
value: 999999.0
type: LocalParameter

543349
value: 999999.0
type: LocalParameter

543626
value: 0.0
type: LocalParameter

542109
value: 0.0
type: LocalParameter

736218
stoichiometry: 1.0
species: 539776
type: SpeciesReference

749949
stoichiometry: 1.0
species: 539966
type: SpeciesReference

540526
fast: false
notes: Abbreviation: R_DTMPK Synonyms: _0 EC Number: 2.7.4.9 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dtmp <==> adp + dtdp Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 738291
reactant: 738279
kinetic law: 738315
type: Reaction
name: dTMP kinase
reactant: 738267
reversible: true
product: 738303

540679
kinetic law: 740357
product: 740345
reactant: 740333
notes: Abbreviation: R_EX_tyr_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : tyr-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Tyrosine exchange
type: Reaction

741154
stoichiometry: 1.0
species: 539767
type: SpeciesReference

543988
value: 0.0
type: LocalParameter

542641
value: 999999.0
type: LocalParameter

543270
value: 0.0
type: LocalParameter

541518
value: 0.0
type: LocalParameter

542197
value: 999999.0
type: LocalParameter

732949
stoichiometry: 1.0
species: 539760
type: SpeciesReference

540133
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Arginine_C6H15N4O2
type: Species

752780
stoichiometry: 1.0
species: 539659
type: SpeciesReference

542419
value: 999999.0
type: LocalParameter

749249
stoichiometry: 1.0
species: 539550
type: SpeciesReference

541982
value: 0.0
type: LocalParameter

739644
stoichiometry: 1.0
species: 539934
type: SpeciesReference

744291
stoichiometry: 1.0
species: 539590
type: SpeciesReference

746688
stoichiometry: 1.0
species: 540021
type: SpeciesReference

543566
value: 999999.0
type: LocalParameter

753845
stoichiometry: 1.0
species: 539572
type: SpeciesReference

751101
stoichiometry: 1.0
species: 540101
type: SpeciesReference

540808
notes: Abbreviation: R_HISTP Synonyms: _0 EC Number: 3.1.3.15 SUBSYSTEM: Histidine Metabolism Equation: [c] : h2o + hisp --> histd + pi Confidence Level: 2 genes: LOCUS:BPLAN_204#ABBREVIATION:hisB#ECNUMBERS:3.1.3.15,-!-,4.2.1.19# proteins: NAME:Imidazoleglycerol phosphate dehydratase and Histidinol phosphatase#ABBREVIATION:HisB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_204)
reactant: 743086
reversible: false
type: Reaction
reactant: 743074
product: 743111
name: histidinol-phosphatase
fast: false
kinetic law: 743123
product: 743099

543627
value: 0.0
type: LocalParameter

747560
stoichiometry: 1.0
species: 539779
type: SpeciesReference

731561
stoichiometry: 1.0
species: 539611
type: SpeciesReference

745333
stoichiometry: 1.0
species: 539966
type: SpeciesReference

543347
value: -999999.0
type: LocalParameter

750931
stoichiometry: 1.0
species: 540021
type: SpeciesReference

754292
stoichiometry: 1.0
species: 540021
type: SpeciesReference

542265
value: 0.0
type: LocalParameter

542991
value: 0.0
type: LocalParameter

541511
value: 0.0
type: LocalParameter

540023
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-(5-Phospho-D-ribosyl)anthranilate_C12H13NO9P
type: Species

542529
value: 0.0
type: LocalParameter

753336
stoichiometry: 1.0
species: 539693
type: SpeciesReference

736482
stoichiometry: 1.0
species: 539688
type: SpeciesReference

733663
stoichiometry: 1.0
species: 539653
type: SpeciesReference

540748
reversible: true
product: 741775
kinetic law: 741823
reactant: 741737
product: 741787
reactant: 741762
type: Reaction
product: 741799
reactant: 741750
product: 741811
notes: Abbreviation: R_GLUDy Synonyms: _0 EC Number: 1.4.1.4 SUBSYSTEM: Glutamate metabolism Equation: [c] : glu-L + h2o + nadp <==> akg + h + nadph + nh4 Confidence Level: 2 genes: LOCUS:BPLAN_514#ABBREVIATION:gdhA#ECNUMBERS:1.4.1.4# proteins: NAME:Glutamate dehydrogenase#ABBREVIATION:GdhA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_514)
fast: false
name: glutamate dehydrogenase (NADP)

743990
stoichiometry: 1.0
species: 539779
type: SpeciesReference

542751
value: -999999.0
type: LocalParameter

541624
value: 0.0
type: LocalParameter

748574
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543568
value: 0.0
type: LocalParameter

542191
value: 999999.0
type: LocalParameter

541512
value: 0.0
type: LocalParameter

542992
value: -999999.0
type: LocalParameter

540520
product: 738135
reactant: 738123
kinetic law: 738171
reversible: false
product: 738147
fast: false
type: Reaction
name: dephospho-CoA kinase
notes: Abbreviation: R_DPCOAK Synonyms: _0 EC Number: 2.7.1.24 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + dpcoa --> adp + coa + h Confidence Level: 2 genes: LOCUS:BPLAN_440#ABBREVIATION:coaE#ECNUMBERS:2.7.1.24# proteins: NAME:dephospho-CoA kinase#ABBREVIATION:CoaE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_440)
reactant: 738111
product: 738159

540022
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Phospho-beta-D-ribosylamine_C5H11NO7P
type: Species

540892
reactant: 745019
notes: Abbreviation: R_LEUTA Synonyms: _2 EC Number: 2.6.1.42 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 4mop + glu-L <==> akg + leu-L Confidence Level: 2 genes: LOCUS:BPLAN_185#ABBREVIATION:ilvE#ECNUMBERS:2.6.1.42,-!-,2.6.1.2# LOCUS:BPLAN_298#ABBREVIATION:tyrB#ECNUMBERS:2.6.1.57# proteins: NAME:Branched-chain-amino-acid aminotransferase#ABBREVIATION:IlvE# NAME:Tyrosine aminotransferase#ABBREVIATION:TyrB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_298) or (BPLAN_185)
kinetic law: 745068
product: 745055
type: Reaction
reactant: 745031
fast: false
name: leucine transaminase
reversible: true
product: 745043

543122
value: 0.0
type: LocalParameter

542901
value: 0.0
type: LocalParameter

743353
stoichiometry: 1.0
species: 539795
type: SpeciesReference

543272
value: 999999.0
type: LocalParameter

540805
product: 743050
reversible: false
reactant: 743013
kinetic law: 743062
product: 743037
type: Reaction
fast: false
name: histidinol dehydrogenase
product: 743025
reactant: 742989
notes: Abbreviation: R_HISTD Synonyms: _0 EC Number: 1.1.1.23 SUBSYSTEM: Histidine Metabolism Equation: [c] : h2o + histd + (2) nad --> (3) h + his-L + (2) nadh Confidence Level: 2 genes: LOCUS:BPLAN_206#ABBREVIATION:hisD#ECNUMBERS:1.1.1.23# proteins: NAME:Histidinol dehydrogenase#ABBREVIATION:HisD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_206)
reactant: 743001

539514
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Octaprenyl-6-methoxy-1,4-benzoquinol_C47H72O3
type: Species

541625
value: 999999.0
type: LocalParameter

743637
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542041
value: 999999.0
type: LocalParameter

542527
value: 999999.0
type: LocalParameter

740706
stoichiometry: 1.0
species: 539738
type: SpeciesReference

541513
value: 0.0
type: LocalParameter

542194
value: 0.0
type: LocalParameter

540025
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _1-(5-Phosphoribosyl)-ATP_C15H19N5O20P4
type: Species

540802
product: 742965
product: 742941
fast: false
reactant: 742891
kinetic law: 742977
type: Reaction
reactant: 742903
notes: Abbreviation: R_HISabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + his-L[e] --> adp[c] + h[c] + his-L[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reversible: false
name: L-histidine transport via ABC system
reactant: 742916
product: 742953
product: 742928

542900
value: 0.0
type: LocalParameter

543878
value: 0.0
type: LocalParameter

753626
stoichiometry: 1.0
species: 540071
type: SpeciesReference

543346
value: 0.0
type: LocalParameter

542266
value: 0.0
type: LocalParameter

736603
stoichiometry: 1.0
species: 539496
type: SpeciesReference

541480
value: 0.0
type: LocalParameter

752671
stoichiometry: 1.0
species: 540124
type: SpeciesReference

749358
stoichiometry: 1.0
species: 540031
type: SpeciesReference

543879
value: -999999.0
type: LocalParameter

540024
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _1-(5-Phosphoribosyl)-AMP_C15H19N5O14P2
type: Species

542040
value: -999999.0
type: LocalParameter

746579
stoichiometry: 1.0
species: 540021
type: SpeciesReference

542994
value: 999999.0
type: LocalParameter

542193
value: 0.0
type: LocalParameter

734350
stoichiometry: 0.241
species: 540087
type: SpeciesReference

541627
value: 0.0
type: LocalParameter

541363
kinetic law: 755487
product: 755475
reactant: 755463
notes: Abbreviation: R_TPI Synonyms: _0 EC Number: 5.3.1.1 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : dhap <==> g3p Confidence Level: 2 SMP genes: LOCUS:BPLAN_531#ABBREVIATION:tpiA#ECNUMBERS:5.3.1.1# proteins: NAME:triosephosphate isomerase#ABBREVIATION:Tpi# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_531)
fast: false
reversible: true
name: triose-phosphate isomerase
type: Reaction

543274
value: 0.0
type: LocalParameter

540745
product: 741712
reactant: 741663
name: L-glutamine transport via ABC system
reactant: 741651
notes: Abbreviation: R_GLNabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + gln-L[e] + h2o[c] --> adp[c] + gln-L[c] + h[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 741700
reactant: 741639
product: 741688
type: Reaction
reversible: false
kinetic law: 741725
fast: false
product: 741675

539512
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Oxobutanoate_C4H5O3
type: Species

543120
value: 0.0
type: LocalParameter

542750
value: 0.0
type: LocalParameter

541258
kinetic law: 753228
name: ribonucleoside-diphosphate reductase (ADP)
product: 753216
reactant: 753168
notes: Abbreviation: R_RNDR1 Synonyms: _0 EC Number: 1.17.4.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : adp + trdrd --> dadp + h2o + trdox Confidence Level: 2 genes: LOCUS:BPLAN_330#ABBREVIATION:nrdE#ECNUMBERS:1.17.4.1# LOCUS:BPLAN_p004#ABBREVIATION:nrdF#ECNUMBERS:1.17.4.1# proteins: NAME:Ribonucleoside diphosphate reductase subunit alpha#ABBREVIATION:NrdE# NAME:ribonucleotide-diphosphate reductase beta subunit#ABBREVIATION:NrdE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_330 and BPLAN_p004)
type: Reaction
reactant: 753180
product: 753204
product: 753192
fast: false
reversible: false

540238
type: Reaction
notes: Abbreviation: R_ACOTA Synonyms: _0 EC Number: 2.6.1.11 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : acorn + akg <==> acg5sa + glu-L Confidence Level: 2 genes: LOCUS:BPLAN_325#ABBREVIATION:argD#ECNUMBERS:2.6.1.11,-!-,2.6.1.17# LOCUS:BPLAN_012#ABBREVIATION:argD#ECNUMBERS:2.6.1.11,-!-,2.6.1.17# proteins: NAME:acetylornithine transaminase#ABBREVIATION:ArgD# NAME:acetylornithine transaminase#ABBREVIATION:ArgD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_325) or (BPLAN_012)
reversible: true
name: acetylornithine transaminase
fast: false
product: 731067
reactant: 731043
reactant: 731030
product: 731055
kinetic law: 731079

748427
stoichiometry: 1.0
species: 539681
type: SpeciesReference

541483
value: 0.0
type: LocalParameter

542269
value: 999999.0
type: LocalParameter

739426
stoichiometry: 1.0
species: 539780
type: SpeciesReference

757081
stoichiometry: 1.0
species: 539673
type: SpeciesReference

750215
stoichiometry: 1.0
species: 539783
type: SpeciesReference

744183
stoichiometry: 1.0
species: 539522
type: SpeciesReference

742538
stoichiometry: 1.0
species: 539776
type: SpeciesReference

543277
value: 0.0
type: LocalParameter

739004
stoichiometry: 1.0
species: 540137
type: SpeciesReference

541628
value: 0.0
type: LocalParameter

544030
value: 0.0
type: LocalParameter

541987
value: 0.0
type: LocalParameter

539741
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine_C8H15N3O8P
type: Species

744207
stoichiometry: 1.0
species: 539779
type: SpeciesReference

731959
stoichiometry: 1.0
species: 540117
type: SpeciesReference

540027
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
type: Species

749502
stoichiometry: 1.0
species: 540104
type: SpeciesReference

540955
name: NAD synthase (nh3)
type: Reaction
product: 746542
reactant: 746518
reactant: 746530
product: 746566
product: 746554
product: 746579
fast: false
reversible: false
reactant: 746505
kinetic law: 746591
notes: Abbreviation: R_NADS1 Synonyms: _0 EC Number: 6.3.1.5 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + dnad + nh4 --> amp + h + nad + ppi Confidence Level: 2 genes: LOCUS:BPLAN_069#ABBREVIATION:nadE#ECNUMBERS:6.3.5.1# proteins: NAME:Deamido-NAD ammonia ligase or NAD synthetase#ABBREVIATION:NadE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_069)

735175
stoichiometry: 15.0
species: 539969
type: SpeciesReference

542043
value: 0.0
type: LocalParameter

542100
value: 0.0
type: LocalParameter

542268
value: -999999.0
type: LocalParameter

539518
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Glycerate 2-phosphate_C3H4O7P
type: Species

543344
value: 0.0
type: LocalParameter

738472
stoichiometry: 1.0
species: 539779
type: SpeciesReference

755871
stoichiometry: 1.0
species: 540094
type: SpeciesReference

541988
value: 0.0
type: LocalParameter

730982
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543276
value: 0.0
type: LocalParameter

539740
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Formate_CH1O2
type: Species

540026
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
type: Species

542526
value: -999999.0
type: LocalParameter

749574
stoichiometry: 1.0
species: 539988
type: SpeciesReference

541595
value: 999999.0
type: LocalParameter

735308
stoichiometry: 2.0
species: 539659
type: SpeciesReference

743806
stoichiometry: 1.0
species: 539917
type: SpeciesReference

754571
stoichiometry: 1.0
species: 539677
type: SpeciesReference

542101
value: 999999.0
type: LocalParameter

738075
stoichiometry: 1.0
species: 539783
type: SpeciesReference

756621
stoichiometry: 1.0
species: 540107
type: SpeciesReference

742903
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543279
value: 999999.0
type: LocalParameter

755343
stoichiometry: 1.0
species: 540013
type: SpeciesReference

541360
fast: false
kinetic law: 755451
name: thymidylate synthase
product: 755427
notes: Abbreviation: R_TMDS Synonyms: _4 EC Number: 2.1.1.45 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dump + mlthf --> dhf + dtmp Confidence Level: 2 genes: LOCUS:BPLAN_141#ABBREVIATION:thyA#ECNUMBERS:2.1.1.45# proteins: NAME:thymidylate synthetase#ABBREVIATION:ThyA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_141)
reactant: 755415
type: Reaction
reversible: false
product: 755439
reactant: 755403

542190
value: 0.0
type: LocalParameter

544032
value: 0.0
type: LocalParameter

540029
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Proline_C5H9NO2
type: Species

541989
value: 999999.0
type: LocalParameter

542523
value: 0.0
type: LocalParameter

740417
stoichiometry: 1.0
species: 540213
type: SpeciesReference

730606
stoichiometry: 1.0
species: 539944
type: SpeciesReference

541598
value: 0.0
type: LocalParameter

540742
reactant: 741579
kinetic law: 741627
notes: Abbreviation: R_GK1 Synonyms: _0 EC Number: 2.7.4.8 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + gmp <==> adp + gdp Confidence Level: 2 genes: LOCUS:BPLAN_343#ABBREVIATION:gmk#ECNUMBERS:2.7.4.8# proteins: NAME:Guanylate kinase#ABBREVIATION:Gmk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_343)
reactant: 741591
type: Reaction
name: guanylate kinase (GMP:ATP)
product: 741603
reversible: true
fast: false
product: 741615

540895
product: 745153
reactant: 745093
reactant: 745105
kinetic law: 745165
fast: false
type: Reaction
name: L-lysine transport via ABC system
product: 745129
reversible: false
product: 745117
notes: Abbreviation: R_LYSabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + lys-L[e] --> adp[c] + h[c] + lys-L[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 745080
product: 745141

754836
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species: 540013
type: SpeciesReference

739365
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species: 540148
type: SpeciesReference

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species: 539730
type: SpeciesReference

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species: 539783
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742259
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species: 539768
type: SpeciesReference

541908
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539516
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Octaprenyl-3-methyl-6-methoxy- 1,4-benzoquinol_C48H74O3
type: Species

544033
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type: LocalParameter

543342
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type: LocalParameter

542524
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541597
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741360
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species: 539478
type: SpeciesReference

542044
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540958
product: 746664
reactant: 746603
reactant: 746627
reactant: 746615
product: 746688
fast: false
kinetic law: 746700
reactant: 746640
product: 746652
notes: Abbreviation: R_NAMNPP Synonyms: _1 EC Number: 2.4.2.11 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + h2o + nac + prpp --> adp + nicrnt + pi + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_428#ABBREVIATION:pncB#ECNUMBERS:2.4.2.11# proteins: NAME:Nicotinate phosphoribosyltransferase#ABBREVIATION:PncB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_428)
type: Reaction
reversible: false
name: nicotinic acid mononucleotide pyrophosphorylase
product: 746676

540028
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Proline_C5H9NO2
type: Species

541730
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type: LocalParameter

539934
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Leucine_C6H13NO2
type: Species

733373
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species: 539638
type: SpeciesReference

541843
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745105
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species: 539937
type: SpeciesReference

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species: 539590
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543885
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type: LocalParameter

540018
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Porphobilinogen_C10H13N2O4
type: Species

540952
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product: 746456
product: 746468
fast: false
kinetic law: 746492
notes: Abbreviation: R_NADK Synonyms: _0 EC Number: 2.7.1.23 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + nad --> adp + h + nadp Confidence Level: 2 genes: LOCUS:BPLAN_548#ABBREVIATION:ppnK#ECNUMBERS:2.7.1.23# proteins: NAME:NAD kinase#ABBREVIATION:ppnK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_548)
reactant: 746432
reactant: 746444
product: 746480
name: NAD kinase
type: Reaction

542988
value: 999999.0
type: LocalParameter

542534
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type: LocalParameter

539732
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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type: Species

745828
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species: 539783
type: SpeciesReference

543990
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species: 539701
type: SpeciesReference

542046
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736061
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species: 539977
type: SpeciesReference

744437
stoichiometry: 1.0
species: 539498
type: SpeciesReference

543918
value: 0.0
type: LocalParameter

540241
reactant: 731091
product: 731115
notes: Abbreviation: R_ACPS1 Synonyms: _0 EC Number: 2.7.8.7 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : apoACP + coa --> ACP + h + pap Confidence Level: 4 JLR genes: LOCUS:BPLAN_263#ABBREVIATION:acpT#ECNUMBERS:2.7.8.7# proteins: NAME:holo-(acyl carrier protein) synthase 2#ABBREVIATION:AcpT# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_263)
reactant: 731103
name: acyl-carrier protein synthase
reversible: false
product: 731127
type: Reaction
product: 731139
fast: false
kinetic law: 731151

542747
value: 999999.0
type: LocalParameter

740911
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species: 539659
type: SpeciesReference

540019
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Prephenate_C10H8O6
type: Species

541039
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product: 748331
product: 748307
fast: false
reactant: 748282
kinetic law: 748343
notes: Abbreviation: R_NTPP2 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gtp + h2o --> gmp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
name: Nucleoside triphosphate pyrophosphorylase (gtp)
reactant: 748294
product: 748319
type: Reaction

543055
value: 999999.0
type: LocalParameter

542533
value: 999999.0
type: LocalParameter

539733
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Fructose 1,6-bisphosphate_C6H10O12P2
type: Species

541144
product: 750653
reactant: 750628
fast: false
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kinetic law: 750677
type: Reaction
reversible: false
name: inorganic diphosphatase
product: 750665
reactant: 750640

748355
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species: 539695
type: SpeciesReference

756696
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species: 540109
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738111
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species: 539659
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543129
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751222
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species: 539783
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737913
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species: 539715
type: SpeciesReference

543785
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542047
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733433
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species: 539552
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740165
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species: 540192
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732732
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species: 540036
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541732
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739728
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species: 540160
type: SpeciesReference

736109
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species: 539955
type: SpeciesReference

542532
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543883
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748209
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species: 539701
type: SpeciesReference

539730
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Fructose 6-phosphate_C6H11O9P
type: Species

542907
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733517
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species: 539651
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species: 539686
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754086
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species: 540062
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543788
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734678
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species: 539939
type: SpeciesReference

539932
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Leucine_C6H13NO2
type: Species

543916
value: 999999.0
type: LocalParameter

748089
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species: 539699
type: SpeciesReference

539731
constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: Flavin adenine dinucleotide oxidized_C27H31N9O15P2
type: Species

541844
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542989
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542745
value: 0.0
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731899
stoichiometry: 1.0
species: 540013
type: SpeciesReference

543127
value: 0.0
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752467
stoichiometry: 1.0
species: 540013
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542909
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741980
stoichiometry: 1.0
species: 539760
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543057
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752214
stoichiometry: 1.0
species: 539783
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543787
value: 0.0
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542049
value: 0.0
type: LocalParameter

539522
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Carboxy-2-hydroxy-4-methylpentanoate_C7H10O5
type: Species

542744
value: 0.0
type: LocalParameter

542530
value: 0.0
type: LocalParameter

541847
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type: LocalParameter

752298
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species: 539607
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730825
stoichiometry: 1.0
species: 539673
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543913
value: 0.0
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542260
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type: LocalParameter

748005
stoichiometry: 1.0
species: 540013
type: SpeciesReference

755029
stoichiometry: 1.0
species: 540010
type: SpeciesReference

540244
reversible: true
type: Reaction
kinetic law: 731211
reactant: 731175
notes: Abbreviation: R_ACt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: ac[e] + h[e] <==> ac[c] + h[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
name: acetate reversible transport via proton symport
fast: false
product: 731187
reactant: 731163
product: 731199

735029
stoichiometry: 19.0
species: 539783
type: SpeciesReference

742319
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species: 539763
type: SpeciesReference

746336
stoichiometry: 1.0
species: 539964
type: SpeciesReference

754341
stoichiometry: 1.0
species: 539779
type: SpeciesReference

539736
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: Fe2+_Fe
type: Species

753566
stoichiometry: 1.0
species: 540076
type: SpeciesReference

738690
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species: 539518
type: SpeciesReference

732413
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species: 539624
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542906
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732141
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species: 539618
type: SpeciesReference

735393
stoichiometry: 2.0
species: 539783
type: SpeciesReference

543888
value: 999999.0
type: LocalParameter

541846
value: 0.0
type: LocalParameter

543914
value: 0.0
type: LocalParameter

539939
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Malonyl-[acyl-carrier protein]_C14H22N2O10PRS
type: Species

732623
stoichiometry: 1.0
species: 539628
type: SpeciesReference

542983
value: 0.0
type: LocalParameter

740056
stoichiometry: 1.0
species: 540183
type: SpeciesReference

732696
stoichiometry: 1.0
species: 540038
type: SpeciesReference

740333
stoichiometry: 1.0
species: 540097
type: SpeciesReference

739571
stoichiometry: 1.0
species: 539917
type: SpeciesReference

543059
value: 0.0
type: LocalParameter

539737
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide_C8H13N2O9P
type: Species

543125
value: 999999.0
type: LocalParameter

756272
stoichiometry: 1.0
species: 540021
type: SpeciesReference

543911
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542903
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type: LocalParameter

539520
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate_C11H10O6
type: Species

542742
value: 0.0
type: LocalParameter

739390
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species: 539771
type: SpeciesReference

541849
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542262
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type: LocalParameter

542986
value: -999999.0
type: LocalParameter

539936
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Lysine_C6H15N2O2
type: Species

542320
value: 0.0
type: LocalParameter

744728
stoichiometry: 1.0
species: 539532
type: SpeciesReference

756840
stoichiometry: 1.0
species: 540013
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737787
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species: 540021
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747112
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species: 539725
type: SpeciesReference

541141
notes: Abbreviation: R_PNTOt4 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: na1[e] + pnto-R[e] --> na1[c] + pnto-R[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 750580
type: Reaction
kinetic law: 750616
name: Pantothenate sodium symporter
product: 750592
fast: false
reactant: 750568
reversible: false
product: 750604

539521
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-(4-Hydroxyphenyl)pyruvate_C9H7O4
type: Species

542741
value: 999999.0
type: LocalParameter

543886
value: 0.0
type: LocalParameter

542904
value: 0.0
type: LocalParameter

734496
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species: 539638
type: SpeciesReference

750580
stoichiometry: 1.0
species: 540016
type: SpeciesReference

738604
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species: 539727
type: SpeciesReference

539937
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Lysine_C6H15N2O2
type: Species

542263
value: 999999.0
type: LocalParameter

737861
stoichiometry: 1.0
species: 539502
type: SpeciesReference

540247
reversible: false
type: Reaction
notes: Abbreviation: R_ADA Synonyms: _0 EC Number: 3.5.4.4 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : adn + h + h2o --> ins + nh4 Confidence Level: 1 Added EC- JLR genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 731283
reactant: 731235
reactant: 731247
product: 731259
name: Adenosine deaminase
product: 731271
reactant: 731223
fast: false

542985
value: 0.0
type: LocalParameter

750435
stoichiometry: 1.0
species: 539578
type: SpeciesReference

754981
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species: 539512
type: SpeciesReference

539735
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Fe2+_Fe
type: Species

543123
value: 0.0
type: LocalParameter

735879
stoichiometry: 1.0
species: 540013
type: SpeciesReference

753675
stoichiometry: 2.0
species: 539783
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541030
kinetic law: 748137
type: Reaction
name: _5'-nucleotidase (dGMP)
reversible: false
product: 748113
product: 748125
notes: Abbreviation: R_NTD8 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dgmp + h2o --> dgsn + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 748089
reactant: 748101
fast: false

742428
stoichiometry: 1.0
species: 539772
type: SpeciesReference

754498
stoichiometry: 1.0
species: 539732
type: SpeciesReference

752106
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species: 540056
type: SpeciesReference

754134
stoichiometry: 1.0
species: 539684
type: SpeciesReference

542322
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740225
stoichiometry: 1.0
species: 540085
type: SpeciesReference

756489
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543633
value: 0.0
type: LocalParameter

748877
stoichiometry: 1.0
species: 539774
type: SpeciesReference

540466
reactant: 736979
product: 737003
notes: Abbreviation: R_DGK1 Synonyms: _0 EC Number: 2.7.4.8 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dgmp <==> adp + dgdp Confidence Level: 2 Added EC- JLR genes: LOCUS:BPLAN_343#ABBREVIATION:gmk#ECNUMBERS:2.7.4.8# proteins: NAME:Guanylate kinase#ABBREVIATION:Gmk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_343)
name: deoxyguanylate kinase (dGMP:ATP)
reversible: true
type: Reaction
product: 737015
fast: false
reactant: 736991
kinetic law: 737027

542421
value: 0.0
type: LocalParameter

541738
value: -999999.0
type: LocalParameter

731789
stoichiometry: 1.0
species: 539618
type: SpeciesReference

542635
value: 999999.0
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543998
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737679
stoichiometry: 1.0
species: 539783
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750653
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species: 539783
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745974
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species: 539584
type: SpeciesReference

751558
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species: 540021
type: SpeciesReference

734823
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species: 539601
type: SpeciesReference

747499
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species: 540053
type: SpeciesReference

748113
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species: 539700
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732514
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species: 539632
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734896
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species: 539605
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539632
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: D-Alanyl-D-alanine_C6H12N2O3
type: Species

732298
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species: 539562
type: SpeciesReference

543997
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737099
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species: 539538
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750508
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745453
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species: 539779
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539738
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: FMN_C17H19N4O9P
type: Species

755233
stoichiometry: 1.0
species: 539719
type: SpeciesReference

543780
value: 0.0
type: LocalParameter

540355
name: L-aspartate transport in via proton symport
type: Reaction
reactant: 733651
product: 733675
product: 733663
reversible: false
notes: Abbreviation: R_ASPt2 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: asp-L[e] + h[e] --> asp-L[c] + h[c] Confidence Level: 2 genes: LOCUS:BPLAN_282#ABBREVIATION:gltP# proteins: NAME:DAACS, glutamate or aspartate symport#ABBREVIATION:GltP# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_282)
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kinetic law: 733687
fast: false

733035
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species: 539564
type: SpeciesReference

735697
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species: 539756
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542633
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type: LocalParameter

539739
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Formate_CH1O2
type: Species

747680
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species: 539920
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737231
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species: 539484
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735722
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species: 540121
type: SpeciesReference

543634
value: 0.0
type: LocalParameter

753264
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species: 539698
type: SpeciesReference

542323
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736772
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species: 539783
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749030
stoichiometry: 1.0
species: 539743
type: SpeciesReference

744376
stoichiometry: 1.0
species: 539783
type: SpeciesReference

539630
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Alanine_C3H7NO2
type: Species

540469
kinetic law: 737075
product: 737063
product: 737051
reactant: 737039
notes: Abbreviation: R_DHAD1 Synonyms: _0 EC Number: 4.2.1.9 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 23dhmb --> 3mob + h2o Confidence Level: 2 genes: LOCUS:BPLAN_083#ABBREVIATION:ilvD#ECNUMBERS:4.2.1.9# proteins: NAME:dihidroxy acid dehydratase#ABBREVIATION:IlvD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_083)
fast: false
reversible: false
name: dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)
type: Reaction

541033
fast: false
notes: Abbreviation: R_NTD9 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gmp + h2o --> gsn + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 748197
product: 748173
reactant: 748149
reactant: 748161
product: 748185
name: _5'-nucleotidase (GMP)
type: Reaction
reversible: false

735661
stoichiometry: 1.0
species: 540116
type: SpeciesReference

753529
stoichiometry: 1.0
species: 539779
type: SpeciesReference

541739
value: 999999.0
type: LocalParameter

543995
value: 0.0
type: LocalParameter

542632
value: 0.0
type: LocalParameter

748294
stoichiometry: 1.0
species: 539779
type: SpeciesReference

751898
stoichiometry: 1.0
species: 540062
type: SpeciesReference

751752
stoichiometry: 1.0
species: 539784
type: SpeciesReference

542326
value: 0.0
type: LocalParameter

751813
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543881
value: 999999.0
type: LocalParameter

745561
stoichiometry: 1.0
species: 539945
type: SpeciesReference

543407
value: 0.0
type: LocalParameter

752575
stoichiometry: 1.0
species: 539712
type: SpeciesReference

543050
value: 0.0
type: LocalParameter

743880
stoichiometry: 1.0
species: 539622
type: SpeciesReference

541147
kinetic law: 750713
product: 750701
reactant: 750689
notes: Abbreviation: R_PPBNGt Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: ppbng[e] <==> ppbng[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Phorphobilinogen transport
type: Reaction

732361
stoichiometry: 1.0
species: 539673
type: SpeciesReference

542425
value: 999999.0
type: LocalParameter

751270
stoichiometry: 1.0
species: 539500
type: SpeciesReference

751330
stoichiometry: 1.0
species: 539620
type: SpeciesReference

540127
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Xylulose 5-phosphate_C5H9O8P
type: Species

747848
stoichiometry: 1.0
species: 539671
type: SpeciesReference

542639
value: 0.0
type: LocalParameter

734025
stoichiometry: 0.014
species: 539695
type: SpeciesReference

737015
stoichiometry: 1.0
species: 539698
type: SpeciesReference

542325
value: 0.0
type: LocalParameter

741750
stoichiometry: 1.0
species: 539779
type: SpeciesReference

745189
stoichiometry: 1.0
species: 539942
type: SpeciesReference

539931
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: potassium_K
type: Species

744946
stoichiometry: 1.0
species: 539934
type: SpeciesReference

753192
stoichiometry: 1.0
species: 539687
type: SpeciesReference

741046
stoichiometry: 1.0
species: 539747
type: SpeciesReference

540128
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Acetate_C2H3O2
type: Species

756732
stoichiometry: 8.0
species: 539926
type: SpeciesReference

543993
value: 999999.0
type: LocalParameter

755727
stoichiometry: 1.0
species: 539922
type: SpeciesReference

542424
value: 0.0
type: LocalParameter

740273
stoichiometry: 1.0
species: 540201
type: SpeciesReference

541733
value: 999999.0
type: LocalParameter

731127
stoichiometry: 1.0
species: 539783
type: SpeciesReference

740863
stoichiometry: 1.0
species: 539746
type: SpeciesReference

542638
value: 0.0
type: LocalParameter

749093
stoichiometry: 1.0
species: 539760
type: SpeciesReference

543781
value: 0.0
type: LocalParameter

543631
value: 0.0
type: LocalParameter

543409
value: 0.0
type: LocalParameter

542328
value: -999999.0
type: LocalParameter

541736
value: 0.0
type: LocalParameter

754413
stoichiometry: 1.0
species: 540076
type: SpeciesReference

541036
reactant: 748222
product: 748246
reversible: false
notes: Abbreviation: R_NTPP1 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dgtp + h2o --> dgmp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
fast: false
name: Nucleoside triphosphate pyrophosphorylase (dgtp)
kinetic law: 748270
reactant: 748209
product: 748234
type: Reaction
product: 748258

543052
value: 0.0
type: LocalParameter

746603
stoichiometry: 1.0
species: 539659
type: SpeciesReference

541841
value: 999999.0
type: LocalParameter

747402
stoichiometry: 1.0
species: 540021
type: SpeciesReference

731463
stoichiometry: 1.0
species: 539760
type: SpeciesReference

745213
stoichiometry: 1.0
species: 539941
type: SpeciesReference

543783
value: 999999.0
type: LocalParameter

733723
stoichiometry: 1.0
species: 539760
type: SpeciesReference

543991
value: 0.0
type: LocalParameter

541735
value: 0.0
type: LocalParameter

543053
value: 0.0
type: LocalParameter

732201
stoichiometry: 1.0
species: 539659
type: SpeciesReference

542422
value: 0.0
type: LocalParameter

540682
kinetic law: 740393
product: 740381
reactant: 740369
notes: Abbreviation: R_EX_urea_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : urea <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Urea exchange
type: Reaction

751162
stoichiometry: 1.0
species: 539659
type: SpeciesReference

540352
reversible: false
reactant: 733577
product: 733602
kinetic law: 733627
reactant: 733590
fast: false
name: aspartate kinase
product: 733615
type: Reaction
notes: Abbreviation: R_ASPK Synonyms: _0 EC Number: 2.7.2.4 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : asp-L + atp --> 4pasp + adp Confidence Level: 2 genes: LOCUS:BPLAN_138#ABBREVIATION:thrA#ECNUMBERS:2.7.2.4,-!-,1.1.1.3# proteins: NAME:Homoserine dehydrogenase#ABBREVIATION:MetL# NAME:Aspartate kinase I#ABBREVIATION:ThrA# NAME:Aspartokinase III#ABBREVIATION:LysC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_138)

542636
value: 0.0
type: LocalParameter

541840
value: 0.0
type: LocalParameter

543337
value: 0.0
type: LocalParameter

751715
stoichiometry: 1.0
species: 540026
type: SpeciesReference

738883
stoichiometry: 1.0
species: 539651
type: SpeciesReference

542388
value: 0.0
type: LocalParameter

746204
stoichiometry: 1.0
species: 539955
type: SpeciesReference

756417
stoichiometry: 1.0
species: 539611
type: SpeciesReference

734230
stoichiometry: 4.0E-4
species: 539969
type: SpeciesReference

541880
value: 0.0
type: LocalParameter

541309
kinetic law: 754317
product: 754292
product: 754304
notes: Abbreviation: R_SUCBZL Synonyms: _0 EC Number: 6.2.1.26 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + coa + sucbz --> amp + ppi + sbzcoa Confidence Level: 2 genes: LOCUS:BPLAN_365#ABBREVIATION:menE#ECNUMBERS:6.2.1.26# proteins: NAME:O-succinylbenzoate-CoA ligase#ABBREVIATION:MenE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_365)
reactant: 754268
type: Reaction
reversible: false
reactant: 754256
reactant: 754243
fast: false
product: 754280
name: o-succinylbenzoate-CoA ligase

741968
stoichiometry: 1.0
species: 539784
type: SpeciesReference

540146
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Glycine_C2H5NO2
type: Species

541993
value: -999999.0
type: LocalParameter

539634
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (S)-2-Acetolactate_C5H7O4
type: Species

541243
reactant: 752854
reversible: false
notes: Abbreviation: R_PYDXPP Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : h2o + pydx5p --> pi + pydx Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
type: Reaction
fast: false
kinetic law: 752902
product: 752878
reactant: 752866
product: 752890
name: Pyridoxal 5-phosphate phosphatase

541658
value: 0.0
type: LocalParameter

751076
stoichiometry: 1.0
species: 540011
type: SpeciesReference

541912
value: 999999.0
type: LocalParameter

543225
value: 0.0
type: LocalParameter

751137
stoichiometry: 1.0
species: 540108
type: SpeciesReference

748451
stoichiometry: 1.0
species: 539671
type: SpeciesReference

543449
value: 0.0
type: LocalParameter

543554
value: 0.0
type: LocalParameter

750811
stoichiometry: 1.0
species: 539611
type: SpeciesReference

755969
stoichiometry: 1.0
species: 540096
type: SpeciesReference

749237
stoichiometry: 1.0
species: 539783
type: SpeciesReference

732937
stoichiometry: 1.0
species: 539639
type: SpeciesReference

540643
kinetic law: 739922
product: 739910
reactant: 739898
notes: Abbreviation: R_EX_o2_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : o2 <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: O2 exchange
type: Reaction

540145
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Glutamate_C5H8NO4
type: Species

542161
value: 999999.0
type: LocalParameter

543092
value: 0.0
type: LocalParameter

541456
value: 0.0
type: LocalParameter

541506
value: 0.0
type: LocalParameter

542476
value: 0.0
type: LocalParameter

749937
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540538
reactant: 738544
reactant: 738556
kinetic law: 738592
name: _1-deoxy-D-xylulose 5-phosphate synthase
product: 738580
fast: false
product: 738568
reversible: false
reactant: 738532
type: Reaction
notes: Abbreviation: R_DXPS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : g3p + h + pyr --> co2 + dxyl5p Confidence Level: 1 EC 4.1.3.37 transferred to:EC 2.2.1.7NJ genes: none proteins: none citations: none GENE ASSOCIATION:

541911
value: -999999.0
type: LocalParameter

539636
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: S-Adenosyl-L-methionine_C15H23N6O5S
type: Species

543339
value: 0.0
type: LocalParameter

757334
stoichiometry: 1.0
species: 539783
type: SpeciesReference

741579
stoichiometry: 1.0
species: 539659
type: SpeciesReference

542386
value: 0.0
type: LocalParameter

540640
kinetic law: 739886
product: 739873
reactant: 739861
notes: Abbreviation: R_EX_nh4_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : nh4 <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Ammonia exchange
type: Reaction

541991
value: 0.0
type: LocalParameter

738739
stoichiometry: 1.0
species: 539586
type: SpeciesReference

542160
value: -999999.0
type: LocalParameter

540144
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Glutamine_C5H10N2O3
type: Species

540358
product: 733735
kinetic law: 733747
reactant: 733699
notes: Abbreviation: R_ASPTA Synonyms: _29 EC Number: 2.6.1.1 SUBSYSTEM: Alanine and Aspartate Metabolism Equation: [c] : akg + asp-L <==> glu-L + oaa Confidence Level: 2 genes: LOCUS:BPLAN_285#ABBREVIATION:aspC#ECNUMBERS:2.6.1.1# proteins: NAME:aspartate aminotransferase#ABBREVIATION:AspC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_285)
fast: false
product: 733723
reversible: true
reactant: 733711
type: Reaction
name: aspartate transaminase

540535
name: dUTP diphosphatase
type: Reaction
reversible: false
fast: false
product: 738508
product: 738496
kinetic law: 738520
product: 738484
reactant: 738472
notes: Abbreviation: R_DUTPDP Synonyms: _0 EC Number: 3.6.1.23 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dutp + h2o --> dump + h + ppi Confidence Level: 2 genes: LOCUS:BPLAN_035#ABBREVIATION:dut#ECNUMBERS:3.6.1.23# LOCUS:BPLAN_p001#ABBREVIATION:dut#ECNUMBERS:3.6.1.23# proteins: NAME:deoxyuridine 5'-triphosphate nucleotidohydrolase#ABBREVIATION:Dut# NAME:dUTP pyrophosphatase#ABBREVIATION:Dut# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_035) or (BPLAN_p001)
reactant: 738460

745309
stoichiometry: 1.0
species: 539964
type: SpeciesReference

746845
stoichiometry: 1.0
species: 540111
type: SpeciesReference

541669
value: 0.0
type: LocalParameter

743475
stoichiometry: 1.0
species: 539760
type: SpeciesReference

541914
value: 0.0
type: LocalParameter

541729
value: 0.0
type: LocalParameter

541503
value: 0.0
type: LocalParameter

542475
value: 0.0
type: LocalParameter

541240
type: Reaction
product: 752829
product: 752816
reactant: 752780
reversible: false
reactant: 752792
product: 752804
kinetic law: 752841
fast: false
name: pyridoxal kinase
notes: Abbreviation: R_PYDXK Synonyms: _0 EC Number: 2.7.1.35 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + pydx --> adp + h + pydx5p Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:

756792
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543227
value: 0.0
type: LocalParameter

731271
stoichiometry: 1.0
species: 539970
type: SpeciesReference

543552
value: 999999.0
type: LocalParameter

738327
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543447
value: 999999.0
type: LocalParameter

543090
value: 999999.0
type: LocalParameter

732913
stoichiometry: 1.0
species: 539667
type: SpeciesReference

541992
value: 0.0
type: LocalParameter

542385
value: 0.0
type: LocalParameter

540143
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Fumarate_C4H2O4
type: Species

543001
value: 999999.0
type: LocalParameter

541657
value: 0.0
type: LocalParameter

540868
product: 744401
type: Reaction
product: 744413
reactant: 744376
reactant: 744388
fast: false
notes: Abbreviation: R_KARA1i Synonyms: _0 EC Number: 1.1.1.86 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : alac-S + h + nadph --> 23dhmb + nadp Confidence Level: 2 used to be named AHAI; renamed for consistency; irreversible form of KARA1i - NCD genes: LOCUS:BPLAN_086#ABBREVIATION:ilvC#ECNUMBERS:1.1.1.86# proteins: NAME:acetohydroxy acid isomeroreductase#ABBREVIATION:IlvC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_086)
name: acetohydroxy acid isomeroreductase
reversible: false
kinetic law: 744425
reactant: 744364

741542
stoichiometry: 1.0
species: 539751
type: SpeciesReference

542166
value: 0.0
type: LocalParameter

756585
stoichiometry: 1.0
species: 539969
type: SpeciesReference

753023
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542307
value: 0.0
type: LocalParameter

742017
stoichiometry: 1.0
species: 539766
type: SpeciesReference

735903
stoichiometry: 1.0
species: 539603
type: SpeciesReference

542473
value: 999999.0
type: LocalParameter

539638
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: AMP_C10H12N5O7P
type: Species

541916
value: 0.0
type: LocalParameter

543220
value: 0.0
type: LocalParameter

539578
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _Mevalonate-5-phosphate_C6H10O7P
type: Species

541509
value: 999999.0
type: LocalParameter

740441
stoichiometry: 1.0
species: 539733
type: SpeciesReference

541667
value: 999999.0
type: LocalParameter

734411
stoichiometry: 45.5608
species: 539611
type: SpeciesReference

736542
stoichiometry: 1.0
species: 539783
type: SpeciesReference

541453
value: 999999.0
type: LocalParameter

541654
value: -999999.0
type: LocalParameter

750033
stoichiometry: 1.0
species: 539964
type: SpeciesReference

542308
value: 0.0
type: LocalParameter

542472
value: 0.0
type: LocalParameter

543221
value: -999999.0
type: LocalParameter

541915
value: 0.0
type: LocalParameter

541998
value: 0.0
type: LocalParameter

543550
value: -999999.0
type: LocalParameter

541666
value: -999999.0
type: LocalParameter

733941
stoichiometry: 0.229
species: 539649
type: SpeciesReference

540862
kinetic law: 744267
product: 744255
reactant: 744243
reactant: 744231
notes: Abbreviation: R_IPPMIb Synonyms: _0 EC Number: 4.2.1.33 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 2ippm + h2o <==> 3c3hmp Confidence Level: 2 Part of IPPMI (3-isopropylmalate dehydrogenase) enzyme added EC -NCD genes: LOCUS:BPLAN_565#ABBREVIATION:leuD#ECNUMBERS:4.2.1.33,-!-,4.2.1.35# LOCUS:BPLAN_566#ABBREVIATION:leuC#ECNUMBERS:4.2.1.33# proteins: NAME:Isopropylmalate isomerase small subunit#ABBREVIATION:LeuC# NAME:Isopropylmalate isomerase large subunit#ABBREVIATION:LeuD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_566 and BPLAN_565)
fast: false
reversible: true
name: _2-isopropylmalate hydratase
type: Reaction

541655
value: 999999.0
type: LocalParameter

542305
value: 999999.0
type: LocalParameter

753748
stoichiometry: 1.0
species: 539603
type: SpeciesReference

541919
value: 0.0
type: LocalParameter

752939
stoichiometry: 1.0
species: 539783
type: SpeciesReference

755751
stoichiometry: 1.0
species: 539779
type: SpeciesReference

743514
stoichiometry: 1.0
species: 539792
type: SpeciesReference

736917
stoichiometry: 1.0
species: 539779
type: SpeciesReference

744862
stoichiometry: 1.0
species: 539784
type: SpeciesReference

539576
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Methyltetrahydrofolate_C20H24N7O6
type: Species

540865
product: 744315
reactant: 744279
fast: false
name: _2-isopropylmalate synthase
product: 744339
type: Reaction
kinetic law: 744352
reversible: false
reactant: 744291
product: 744327
notes: Abbreviation: R_IPPS Synonyms: _0 EC Number: 4.1.3.12 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 3mob + accoa + h2o --> 3c3hmp + coa + h Confidence Level: 2 genes: LOCUS:BPLAN_567#ABBREVIATION:leuA#ECNUMBERS:4.1.3.12# proteins: NAME:Isopropylmalate synthase#ABBREVIATION:LeuA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_567)
reactant: 744303

730862
stoichiometry: 2.0
species: 540038
type: SpeciesReference

744970
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540148
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Glycerol_C3H8O3
type: Species

541652
value: 0.0
type: LocalParameter

740092
stoichiometry: 1.0
species: 540186
type: SpeciesReference

541995
value: 999999.0
type: LocalParameter

735054
stoichiometry: 13.0
species: 539969
type: SpeciesReference

542164
value: 0.0
type: LocalParameter

541450
value: 0.0
type: LocalParameter

742708
stoichiometry: 1.0
species: 539779
type: SpeciesReference

542389
value: 999999.0
type: LocalParameter

542470
value: 0.0
type: LocalParameter

539639
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Anthranilate_C7H6NO2
type: Species

543223
value: 999999.0
type: LocalParameter

541918
value: 999999.0
type: LocalParameter

541508
value: 0.0
type: LocalParameter

540147
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: D-Glyceraldehyde_C3H6O3
type: Species

540751
reversible: false
reactant: 741847
notes: Abbreviation: R_GLUPRT Synonyms: _0 EC Number: 2.4.2.14 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : gln-L + h2o + prpp --> glu-L + ppi + pram Confidence Level: 2 genes: LOCUS:BPLAN_156#ABBREVIATION:purF#ECNUMBERS:2.4.2.14# proteins: NAME:Amidophosphoribosyltransferase#ABBREVIATION:PurF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_156)
reactant: 741835
reactant: 741859
kinetic law: 741907
product: 741871
name: glutamine phosphoribosyldiphosphate amidotransferase
type: Reaction
fast: false
product: 741895
product: 741883

745780
stoichiometry: 1.0
species: 539478
type: SpeciesReference

541996
value: 0.0
type: LocalParameter

748719
stoichiometry: 1.0
species: 539779
type: SpeciesReference

541664
value: 0.0
type: LocalParameter

542163
value: 0.0
type: LocalParameter

543846
value: 999999.0
type: LocalParameter

747668
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543440
value: 999999.0
type: LocalParameter

540754
kinetic law: 741944
product: 741932
reactant: 741919
notes: Abbreviation: R_GLUR Synonyms: _0 EC Number: 5.1.1.3 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : glu-D <==> glu-L Confidence Level: 2 genes: LOCUS:BPLAN_231#ABBREVIATION:murI#ECNUMBERS:5.1.1.3# proteins: NAME:glutamate racemase#ABBREVIATION:MurI# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_231)
fast: false
reversible: true
name: glutamate racemase
type: Reaction

737207
stoichiometry: 1.0
species: 539657
type: SpeciesReference

544068
value: -999999.0
type: LocalParameter

541396
product: 756212
product: 756200
reactant: 756176
reversible: false
fast: false
type: Reaction
kinetic law: 756224
notes: Abbreviation: R_UAGCVT Synonyms: _0 EC Number: 2.5.1.7 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : pep + uacgam --> pi + uaccg Confidence Level: 2 genes: LOCUS:BPLAN_499#ABBREVIATION:murA#ECNUMBERS:2.5.1.7# proteins: NAME:UDP-N-acetylglucosamine-enolpyruvate transferase#ABBREVIATION:MurA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_499)
reactant: 756188
name: UDP-N-acetylglucosamine 1-carboxyvinyltransferase

539574
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Formyltetrahydrofolate_C20H21N7O7
type: Species

540207
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Tyrosine_C9H11NO3
type: Species

735649
stoichiometry: 1.0
species: 539970
type: SpeciesReference

543909
value: 999999.0
type: LocalParameter

754583
stoichiometry: 1.0
species: 540076
type: SpeciesReference

756128
stoichiometry: 1.0
species: 540103
type: SpeciesReference

750351
stoichiometry: 1.0
species: 540013
type: SpeciesReference

736434
stoichiometry: 1.0
species: 539712
type: SpeciesReference

542814
value: 0.0
type: LocalParameter

543907
value: 0.0
type: LocalParameter

543330
value: 0.0
type: LocalParameter

734981
stoichiometry: 14.0
species: 539967
type: SpeciesReference

542536
value: 0.0
type: LocalParameter

743745
stoichiometry: 1.0
species: 539673
type: SpeciesReference

746784
stoichiometry: 1.0
species: 539754
type: SpeciesReference

749610
stoichiometry: 2.0
species: 539601
type: SpeciesReference

742916
stoichiometry: 1.0
species: 539791
type: SpeciesReference

742247
stoichiometry: 1.0
species: 539659
type: SpeciesReference

737135
stoichiometry: 1.0
species: 539484
type: SpeciesReference

540071
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-Succinyl-2-L-amino-6-oxoheptanedioate_C11H12NO8
type: Species

542056
value: 0.0
type: LocalParameter

749514
stoichiometry: 1.0
species: 540114
type: SpeciesReference

540298
product: 732387
product: 732361
product: 732374
fast: false
reactant: 732335
reactant: 732348
kinetic law: 732400
notes: Abbreviation: R_AKGDH Synonyms: _0 SUBSYSTEM: Citric Acid Cycle Equation: [c] : akg + coa + nad --> co2 + nadh + succoa Confidence Level: 2 Changed from TEST_AKGDH genes: LOCUS:BPLAN_486#ABBREVIATION:lpd#ECNUMBERS:1.8.1.4# LOCUS:BPLAN_421#ABBREVIATION:lpd#ECNUMBERS:1.8.1.4# LOCUS:BPLAN_044#ABBREVIATION:sucA#ECNUMBERS:1.2.4.2# LOCUS:BPLAN_045#ABBREVIATION:sucB#ECNUMBERS:2.3.1.61# LOCUS:BPLAN_005#ABBREVIATION:sucB#ECNUMBERS:2.3.1.61# proteins: NAME:a-ketoglutarate, B#ABBREVIATION:SucB# NAME:a-ketoglutarate, B#ABBREVIATION:SucB# NAME:a-ketoglutarate dehydrogenase, A#ABBREVIATION:SucA# NAME:dihydrolipoamide dehydrogenase#ABBREVIATION:LpdA# NAME:dihydrolipoamide dehydrogenase#ABBREVIATION:LpdA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_045) or (BPLAN_005) and (BPLAN_486) or (BPLAN_421) and (BPLAN_044)
reversible: false
reactant: 732323
name: _2-Oxogluterate dehydrogenase
type: Reaction

542817
value: -999999.0
type: LocalParameter

543848
value: 0.0
type: LocalParameter

539572
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-enolpyruvoyl-6-hydroxy-2-succinyl-3-cyclohexene-1-carboxylate_C14H14O9
type: Species

542537
value: -999999.0
type: LocalParameter

542055
value: 0.0
type: LocalParameter

541303
reversible: false
reactant: 754110
kinetic law: 754171
reactant: 754122
product: 754146
type: Reaction
name: O-succinylhomoserine lyase (L-cysteine)
product: 754158
product: 754134
fast: false
notes: Abbreviation: R_SHSL1 Synonyms: _2 EC Number: 4.2.99.9 SUBSYSTEM: Methionine Metabolism Equation: [c] : cys-L + suchms --> cyst-L + h + succ Confidence Level: 2 new EC - EC 2.5.1.48 NJ genes: LOCUS:BPLAN_072#ABBREVIATION:metBC#ECNUMBERS:2.5.1.48# proteins: NAME:Cystathionine gamma-synthase-cystathionine beta-lyase#ABBREVIATION:MetBC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_072)

735163
stoichiometry: 7.0
species: 539939
type: SpeciesReference

541999
value: 0.0
type: LocalParameter

541249
product: 753011
type: Reaction
reversible: false
name: riboflavin kinase
product: 753023
notes: Abbreviation: R_RBFK Synonyms: _0 EC Number: 2.7.1.26 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + ribflv --> adp + fmn + h Confidence Level: 2 genes: LOCUS:BPLAN_562#ABBREVIATION:ribF#ECNUMBERS:2.7.1.26,-!-,2.7.7.2# proteins: NAME:Flavokinase and FAD synthetase#ABBREVIATION:RibF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_562)
reactant: 752987
product: 752999
fast: false
kinetic law: 753035
reactant: 752975

740381
stoichiometry: 1.0
species: 540210
type: SpeciesReference

744753
stoichiometry: 1.0
species: 539673
type: SpeciesReference

739221
stoichiometry: 1.0
species: 540144
type: SpeciesReference

543559
value: 999999.0
type: LocalParameter

540204
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Tryptophan_C11H12N2O2
type: Species

748828
stoichiometry: 1.0
species: 540021
type: SpeciesReference

542816
value: 0.0
type: LocalParameter

542760
value: 0.0
type: LocalParameter

730970
stoichiometry: 1.0
species: 539599
type: SpeciesReference

755535
stoichiometry: 1.0
species: 539967
type: SpeciesReference

540649
kinetic law: 739995
product: 739983
reactant: 739971
notes: Abbreviation: R_EX_pi_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : pi <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Phosphate exchange
type: Reaction

544067
value: 0.0
type: LocalParameter

541393
reversible: true
fast: false
kinetic law: 756164
name: UDP-N-acetylglucosamine acyltransferase
product: 756140
reactant: 756128
notes: Abbreviation: R_UAGAAT Synonyms: _0 EC Number: 2.3.1.129 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : 3hmrsACP + uacgam <==> ACP + u3aga Confidence Level: 1 JLR- NH page 1041 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 756152
reactant: 756115
type: Reaction

543332
value: 0.0
type: LocalParameter

735539
stoichiometry: 1.0
species: 539679
type: SpeciesReference

742501
stoichiometry: 1.0
species: 539743
type: SpeciesReference

742854
stoichiometry: 1.0
species: 539783
type: SpeciesReference

749829
stoichiometry: 1.0
species: 539673
type: SpeciesReference

731621
stoichiometry: 1.0
species: 539611
type: SpeciesReference

736338
stoichiometry: 1.0
species: 539659
type: SpeciesReference

542811
value: 0.0
type: LocalParameter

741274
stoichiometry: 1.0
species: 539749
type: SpeciesReference

540646
kinetic law: 739958
product: 739946
reactant: 739934
notes: Abbreviation: R_EX_phe_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : phe-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Phenylalanine exchange
type: Reaction

542053
value: 999999.0
type: LocalParameter

734387
stoichiometry: 0.136
species: 540121
type: SpeciesReference

540142
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: D-Fructose_C6H12O6
type: Species

539570
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (R)-5-Diphosphomevalonate_C6H10O10P2
type: Species

542539
value: 999999.0
type: LocalParameter

738219
stoichiometry: 1.0
species: 539673
type: SpeciesReference

730509
stoichiometry: 1.0
species: 539548
type: SpeciesReference

741859
stoichiometry: 1.0
species: 540031
type: SpeciesReference

540292
product: 732225
reversible: false
notes: Abbreviation: R_AIRC2 Synonyms: _0 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : air + atp + hco3 --> 5caiz + adp + h + pi Confidence Level: 1 JLR- reaction according to Neidhardt pg 563 and 569. According to Meyer et al. Biochemistry 38: 3012-3018pp, this pathway is used in prokaryotes and uses hco3 instead of co2 genes: none proteins: none citations: none GENE ASSOCIATION:
name: phosphoribosylaminoimidazole carboxylase
product: 732237
reactant: 732201
type: Reaction
product: 732261
reactant: 732213
reactant: 732189
product: 732249
kinetic law: 732273
fast: false

543557
value: -999999.0
type: LocalParameter

739788
stoichiometry: 1.0
species: 539959
type: SpeciesReference

543444
value: 0.0
type: LocalParameter

751498
stoichiometry: 1.0
species: 540013
type: SpeciesReference

543228
value: 0.0
type: LocalParameter

743625
stoichiometry: 1.0
species: 539760
type: SpeciesReference

735988
stoichiometry: 1.0
species: 539779
type: SpeciesReference

541174
product: 751330
product: 751342
reactant: 751306
product: 751354
kinetic law: 751366
fast: false
name: phosphoribosylaminoimidazole synthase
reversible: false
notes: Abbreviation: R_PRAIS Synonyms: _0 EC Number: 6.3.3.1 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : atp + fpram --> adp + air + (2) h + pi Confidence Level: 2 genes: LOCUS:BPLAN_157#ABBREVIATION:purM#ECNUMBERS:6.3.3.1# proteins: NAME:phosphoribosylaminoimidazole synthetase#ABBREVIATION:PurM# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_157)
product: 751318
type: Reaction
reactant: 751294

543333
value: -999999.0
type: LocalParameter

751606
stoichiometry: 1.0
species: 539737
type: SpeciesReference

544065
value: 0.0
type: LocalParameter

542810
value: 0.0
type: LocalParameter

540757
notes: Abbreviation: R_GLUt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: glu-L[e] + h[e] --> glu-L[c] + h[c] Confidence Level: 2 NCD genes: LOCUS:BPLAN_282#ABBREVIATION:gltP# proteins: NAME:DAACS, glutamate or aspartate symport#ABBREVIATION:GltP# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_282)
fast: false
product: 741980
product: 741992
kinetic law: 742004
reactant: 741968
name: L-glutamate transport via proton symport
type: Reaction
reversible: false
reactant: 741956

541399
reactant: 756236
type: Reaction
name: UDP-N-acetylglucosamine diphosphorylase
reversible: false
product: 756285
fast: false
product: 756272
kinetic law: 756297
reactant: 756248
reactant: 756260
notes: Abbreviation: R_UAGDP Synonyms: _0 EC Number: 2.7.7.23 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : acgam1p + h + utp --> ppi + uacgam Confidence Level: 2 genes: LOCUS:BPLAN_036#ABBREVIATION:galU#ECNUMBERS:2.7.7.23# proteins: NAME:UTP-glucose-1-phosphate uridylyltransferase#ABBREVIATION:galU# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_036)

542762
value: 0.0
type: LocalParameter

543843
value: 0.0
type: LocalParameter

541246
kinetic law: 752963
notes: Abbreviation: R_PYRt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + pyr[e] <==> h[c] + pyr[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
type: Reaction
product: 752951
reversible: true
reactant: 752927
reactant: 752915
fast: false
product: 752939
name: pyruvate reversible transport via proton symport

541306
kinetic law: 754231
reactant: 754183
product: 754207
type: Reaction
name: superoxide dismutase
notes: Abbreviation: R_SPODM Synonyms: _1 EC Number: 1.15.1.1 SUBSYSTEM: Unassigned Equation: [c] : (2) h + (2) o2s --> h2o2 + o2 Confidence Level: 2 JLR genes: LOCUS:BPLAN_347#ABBREVIATION:sodA#ECNUMBERS:1.15.1.1# proteins: NAME:superoxide dismutase, Mn#ABBREVIATION:SodA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_347)
reactant: 754195
fast: false
product: 754219
reversible: false

542052
value: 0.0
type: LocalParameter

541502
value: 999999.0
type: LocalParameter

542278
value: 0.0
type: LocalParameter

540141
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Formate_CH1O2
type: Species

543445
value: 0.0
type: LocalParameter

753966
stoichiometry: 1.0
species: 539530
type: SpeciesReference

542479
value: 999999.0
type: LocalParameter

542763
value: 0.0
type: LocalParameter

543844
value: 0.0
type: LocalParameter

542813
value: 999999.0
type: LocalParameter

753348
stoichiometry: 1.0
species: 539779
type: SpeciesReference

540201
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Threonine_C4H9NO3
type: Species

740779
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543442
value: 0.0
type: LocalParameter

542277
value: 0.0
type: LocalParameter

543335
value: 999999.0
type: LocalParameter

543769
value: 999999.0
type: LocalParameter

745273
stoichiometry: 1.0
species: 539939
type: SpeciesReference

743365
stoichiometry: 1.0
species: 539611
type: SpeciesReference

544063
value: 999999.0
type: LocalParameter

542478
value: -999999.0
type: LocalParameter

743050
stoichiometry: 2.0
species: 539966
type: SpeciesReference

541500
value: 0.0
type: LocalParameter

542050
value: 0.0
type: LocalParameter

540532
reactant: 738412
product: 738424
reactant: 738399
name: deoxyuridine phosphorylase
notes: Abbreviation: R_DURIPP Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : duri + pi <==> 2dr1p + ura Confidence Level: 2 JLR genes: LOCUS:BPLAN_265#ABBREVIATION:deoD#ECNUMBERS:2.4.2.1# proteins: NAME:Purine-nucleoside phosphorylase#ABBREVIATION:DeoD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
reversible: true
type: Reaction
kinetic law: 738448
product: 738436
fast: false

755041
stoichiometry: 1.0
species: 540013
type: SpeciesReference

540295
kinetic law: 732310
product: 732298
reactant: 732285
notes: Abbreviation: R_AIRC3 Synonyms: _2 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : 5caiz --> 5aizc Confidence Level: 2 JLR- E.coli uses a two enzymes in the phosphoribosylaminoimidazole carboxylase step to generate 5aizc genes: LOCUS:BPLAN_154#ABBREVIATION:purE#ECNUMBERS:4.1.1.21# proteins: NAME:phosphoribosylaminoimidazole carboxylase II#ABBREVIATION:PurE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_154)
fast: false
reversible: false
name: phosphoribosylaminoimidazole carboxylase (mutase rxn)
type: Reaction

738666
stoichiometry: 1.0
species: 539966
type: SpeciesReference

543556
value: 0.0
type: LocalParameter

747860
stoichiometry: 1.0
species: 539779
type: SpeciesReference

732478
stoichiometry: 2.0
species: 539626
type: SpeciesReference

541171
kinetic law: 751282
product: 751270
reactant: 751258
notes: Abbreviation: R_PRAIi Synonyms: _0 EC Number: 5.3.1.24 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : pran --> 2cpr5p Confidence Level: 2 JLR- added irreversible form of PRAI genes: LOCUS:BPLAN_216#ABBREVIATION:trpF#ECNUMBERS:5.3.1.24# proteins: NAME:phosphoribosylanthranilate isomerase PRAI#ABBREVIATION:TrpF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_216)
fast: false
reversible: false
name: phosphoribosylanthranilate isomerase (irreversible)
type: Reaction

749695
stoichiometry: 1.0
species: 539673
type: SpeciesReference

747100
stoichiometry: 1.0
species: 539611
type: SpeciesReference

756852
stoichiometry: 1.0
species: 540113
type: SpeciesReference

542203
value: 999999.0
type: LocalParameter

756285
stoichiometry: 1.0
species: 540103
type: SpeciesReference

542274
value: 0.0
type: LocalParameter

539948
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5,10-Methenyltetrahydrofolate_C20H20N7O6
type: Species

540210
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Urea_CH4N2O
type: Species

542950
value: 0.0
type: LocalParameter

540079
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O-Succinyl-L-homoserine_C8H12NO6
type: Species

542609
value: 0.0
type: LocalParameter

541177
kinetic law: 751414
product: 751402
reactant: 751390
reactant: 751378
notes: Abbreviation: R_PRAMPC Synonyms: _0 EC Number: 3.5.4.19 SUBSYSTEM: Histidine Metabolism Equation: [c] : h2o + prbamp --> prfp Confidence Level: 2 genes: LOCUS:BPLAN_200#ABBREVIATION:hisI#ECNUMBERS:3.5.4.19,-!-,3.6.1.31# proteins: NAME:Phosphoribosyl-ATP pyrophosphatase and -AMP cyclohydrolase#ABBREVIATION:HisI# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_200)
fast: false
reversible: false
name: phosphoribosyl-AMP cyclohydrolase
type: Reaction

542754
value: 0.0
type: LocalParameter

542540
value: 0.0
type: LocalParameter

543851
value: -999999.0
type: LocalParameter

539793
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Histidinol_C6H12N3O
type: Species

543193
value: 0.0
type: LocalParameter

541096
fast: false
type: Reaction
reactant: 749538
notes: Abbreviation: R_PASYN_Pam Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : glyc3p + (0.14) hdeACP + (0.04) myrsACP + octeACP + (0.72) palmACP + (0.1) tdeACP --> (2) ACP + (0.02) pa_Pam Confidence Level: 2 JLR genes: LOCUS:BPLAN_131#ABBREVIATION:plsC#ECNUMBERS:2.3.1.51# LOCUS:BPLAN_042#ABBREVIATION:plsB#ECNUMBERS:2.3.1.15# proteins: NAME:glycerolphosphate acyltransferase#ABBREVIATION:PlsB# NAME:_1-acyl-glycerol-3-phosphate acyltransferase#ABBREVIATION:PlsC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_131) and (BPLAN_042)
product: 749622
reactant: 749598
name: Phosphatidic acid synthase
reactant: 749550
product: 749610
reactant: 749586
kinetic law: 749634
reversible: false
reactant: 749562
reactant: 749574

752178
stoichiometry: 0.02
species: 540032
type: SpeciesReference

735867
stoichiometry: 1.0
species: 539783
type: SpeciesReference

755113
stoichiometry: 1.0
species: 540050
type: SpeciesReference

739971
stoichiometry: 1.0
species: 540014
type: SpeciesReference

745901
stoichiometry: 1.0
species: 539966
type: SpeciesReference

542202
value: -999999.0
type: LocalParameter

736651
stoichiometry: 0.02
species: 539999
type: SpeciesReference

539792
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Histidinol phosphate_C6H11N3O4P
type: Species

542275
value: 999999.0
type: LocalParameter

542608
value: 0.0
type: LocalParameter

540078
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Succinyl-CoA_C25H35N7O19P3S
type: Species

540412
notes: Abbreviation: R_CTPS2 Synonyms: _0 EC Number: 6.3.4.2 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : atp + gln-L + h2o + utp --> adp + ctp + glu-L + (2) h + pi Confidence Level: 2 genes: LOCUS:BPLAN_417#ABBREVIATION:pyrG#ECNUMBERS:6.3.4.2# proteins: NAME:CTP synthetase#ABBREVIATION:PyrG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_417)
name: CTP synthase (glutamine)
reactant: 735685
type: Reaction
product: 735783
reactant: 735697
reactant: 735722
reversible: false
fast: false
reactant: 735710
product: 735759
product: 735734
product: 735771
product: 735747
kinetic law: 735795

543900
value: 0.0
type: LocalParameter

544072
value: 0.0
type: LocalParameter

540985
reactant: 747196
product: 747232
notes: Abbreviation: R_NDPK8 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dadp <==> adp + datp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
kinetic law: 747244
reactant: 747208
reversible: true
fast: false
product: 747220
type: Reaction
name: nucleoside-diphosphate kinase (ATP:dADP)

543111
value: 999999.0
type: LocalParameter

753408
stoichiometry: 1.0
species: 539721
type: SpeciesReference

542753
value: 999999.0
type: LocalParameter

543850
value: 0.0
type: LocalParameter

753554
stoichiometry: 1.0
species: 539494
type: SpeciesReference

737351
stoichiometry: 1.0
species: 539659
type: SpeciesReference

754377
stoichiometry: 2.0
species: 539784
type: SpeciesReference

743965
stoichiometry: 1.0
species: 539920
type: SpeciesReference

750799
stoichiometry: 1.0
species: 539986
type: SpeciesReference

753120
stoichiometry: 2.0
species: 539714
type: SpeciesReference

543778
value: 0.0
type: LocalParameter

539791
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Histidine_C6H9N3O2
type: Species

542272
value: 0.0
type: LocalParameter

542542
value: 0.0
type: LocalParameter

735380
stoichiometry: 1.0
species: 539760
type: SpeciesReference

542756
value: 0.0
type: LocalParameter

543853
value: 999999.0
type: LocalParameter

539700
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Deoxyguanosine_C10H13N5O4
type: Species

543113
value: 0.0
type: LocalParameter

743953
stoichiometry: 1.0
species: 539779
type: SpeciesReference

754256
stoichiometry: 1.0
species: 539677
type: SpeciesReference

756345
stoichiometry: 1.0
species: 540101
type: SpeciesReference

746554
stoichiometry: 1.0
species: 539783
type: SpeciesReference

732780
stoichiometry: 1.0
species: 539506
type: SpeciesReference

542200
value: 0.0
type: LocalParameter

739824
stoichiometry: 1.0
species: 539963
type: SpeciesReference

740345
stoichiometry: 1.0
species: 540207
type: SpeciesReference

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stoichiometry: 1.0
species: 539514
type: SpeciesReference

732635
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543902
value: 999999.0
type: LocalParameter

544070
value: 999999.0
type: LocalParameter

539790
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Histidine_C6H9N3O2
type: Species

734775
stoichiometry: 1.0
species: 539605
type: SpeciesReference

543192
value: 0.0
type: LocalParameter

732153
stoichiometry: 1.0
species: 539742
type: SpeciesReference

730753
stoichiometry: 1.0
species: 539783
type: SpeciesReference

539701
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dGTP_C10H12N5O13P3
type: Species

540075
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: o-Succinylbenzoate_C11H8O5
type: Species

543776
value: 999999.0
type: LocalParameter

737926
stoichiometry: 1.0
species: 539926
type: SpeciesReference

747524
stoichiometry: 1.0
species: 539706
type: SpeciesReference

734666
stoichiometry: 17.0
species: 539783
type: SpeciesReference

745043
stoichiometry: 1.0
species: 539622
type: SpeciesReference

543116
value: 0.0
type: LocalParameter

733529
stoichiometry: 1.0
species: 539784
type: SpeciesReference

730581
stoichiometry: 1.0
species: 539611
type: SpeciesReference

543197
value: 0.0
type: LocalParameter

542698
value: 0.0
type: LocalParameter

752394
stoichiometry: 1.0
species: 539774
type: SpeciesReference

542605
value: 999999.0
type: LocalParameter

740985
stoichiometry: 1.0
species: 539779
type: SpeciesReference

539944
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Malonyl-CoA_C24H33N7O19P3S
type: Species

541720
value: 0.0
type: LocalParameter

740153
stoichiometry: 1.0
species: 540059
type: SpeciesReference

542206
value: 0.0
type: LocalParameter

540074
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Succinate semialdehyde-thiamin diphosphate anion_C16H21N4O10P2S
type: Species

543662
value: 0.0
type: LocalParameter

748991
stoichiometry: 1.0
species: 539783
type: SpeciesReference

743159
stoichiometry: 1.0
species: 539794
type: SpeciesReference

752082
stoichiometry: 1.0
species: 540033
type: SpeciesReference

752431
stoichiometry: 1.0
species: 540040
type: SpeciesReference

733868
stoichiometry: 3.0
species: 539783
type: SpeciesReference

756091
stoichiometry: 1.0
species: 540112
type: SpeciesReference

543115
value: 0.0
type: LocalParameter

738955
stoichiometry: 1.0
species: 539675
type: SpeciesReference

542699
value: 0.0
type: LocalParameter

542543
value: 0.0
type: LocalParameter

542757
value: -999999.0
type: LocalParameter

542953
value: 999999.0
type: LocalParameter

542819
value: 999999.0
type: LocalParameter

543904
value: 0.0
type: LocalParameter

542271
value: 0.0
type: LocalParameter

539945
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Methionine_C5H11NO2S
type: Species

543774
value: 0.0
type: LocalParameter

542205
value: 0.0
type: LocalParameter

542058
value: 0.0
type: LocalParameter

543118
value: 999999.0
type: LocalParameter

543195
value: 999999.0
type: LocalParameter

542696
value: 0.0
type: LocalParameter

541879
value: 0.0
type: LocalParameter

542546
value: 0.0
type: LocalParameter

541312
kinetic law: 754365
product: 754353
product: 754341
reactant: 754329
notes: Abbreviation: R_SUCBZS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 2shchc --> h2o + sucbz Confidence Level: 2 genes: LOCUS:BPLAN_366#ABBREVIATION:menC#ECNUMBERS:4.2.1.-# proteins: NAME:O-succinylbenzoate-CoA synthase#ABBREVIATION:MenC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_366)
fast: false
reversible: false
name: O-succinylbenzoate-CoA synthase
type: Reaction

541099
reactant: 749671
kinetic law: 749719
reactant: 749659
notes: Abbreviation: R_PDH Synonyms: _0 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : coa + nad + pyr --> accoa + co2 + nadh Confidence Level: 2 genes: LOCUS:BPLAN_536#ABBREVIATION:pdhA#ECNUMBERS:1.2.4.1# LOCUS:BPLAN_537#ABBREVIATION:aceF#ECNUMBERS:2.3.1.12# LOCUS:BPLAN_486#ABBREVIATION:lpd#ECNUMBERS:1.8.1.4# LOCUS:BPLAN_194#ABBREVIATION:pdhB#ECNUMBERS:1.2.4.1# proteins: NAME:pyruvate dehydrogenase E1 component subunit beta#ABBREVIATION:PdhB# NAME:dihydrolipoamide dehydrogenase#ABBREVIATION:LpdA# NAME:Pyruvate dehydrogenase, F#ABBREVIATION:AceF# NAME:pyruvate dehydrogenase E1 component subunit alpha#ABBREVIATION:PdhA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_536) and (BPLAN_537) and (BPLAN_486) and (BPLAN_194)
fast: false
product: 749695
product: 749707
product: 749683
reactant: 749646
reversible: false
name: pyruvate dehydrogenase
type: Reaction

542952
value: 0.0
type: LocalParameter

540988
name: nucleoside-diphosphate kinase (ATP:IDP)
reactant: 747268
reversible: true
notes: Abbreviation: R_NDPK9 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + idp <==> adp + itp Confidence Level: 2 NCD genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
product: 747292
reactant: 747256
product: 747280
fast: false
kinetic law: 747305
type: Reaction

540077
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Succinate_C4H4O4
type: Species

543661
value: 0.0
type: LocalParameter

744521
stoichiometry: 1.0
species: 539783
type: SpeciesReference

750701
stoichiometry: 1.0
species: 540017
type: SpeciesReference

750106
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543773
value: 0.0
type: LocalParameter

746047
stoichiometry: 1.0
species: 539779
type: SpeciesReference

542059
value: 999999.0
type: LocalParameter

541390
reactant: 756042
reactant: 756030
name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase
reactant: 756018
notes: Abbreviation: R_UAAGDS Synonyms: _0 EC Number: 6.3.2.13 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : 26dap-M + atp + uamag --> adp + h + pi + ugmd Confidence Level: 2 genes: LOCUS:BPLAN_252#ABBREVIATION:murE#ECNUMBERS:6.3.2.13# proteins: NAME:UDP-N-acetylmuramoxylalanyl-D-glutamate 2,6-diaminopimelate ligase#ABBREVIATION:MurE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_252)
fast: false
reversible: false
kinetic law: 756103
product: 756078
product: 756054
product: 756066
type: Reaction
product: 756091

745683
stoichiometry: 1.0
species: 539659
type: SpeciesReference

747390
stoichiometry: 1.0
species: 539964
type: SpeciesReference

541027
product: 748065
notes: Abbreviation: R_NTD7 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : amp + h2o --> adn + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 748077
name: _5'-nucleotidase (AMP)
type: Reaction
reversible: false
fast: false
product: 748053
reactant: 748041
reactant: 748029

542545
value: 999999.0
type: LocalParameter

749004
stoichiometry: 1.0
species: 540013
type: SpeciesReference

539947
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Methionine_C5H11NO2S
type: Species

540076
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Succinate_C4H4O4
type: Species

747704
stoichiometry: 1.0
species: 540013
type: SpeciesReference

542759
value: 999999.0
type: LocalParameter

542606
value: 0.0
type: LocalParameter

543906
value: 0.0
type: LocalParameter

746615
stoichiometry: 1.0
species: 539779
type: SpeciesReference

541663
value: 0.0
type: LocalParameter

732853
stoichiometry: 1.0
species: 539639
type: SpeciesReference

541877
value: 999999.0
type: LocalParameter

749382
stoichiometry: 1.0
species: 540021
type: SpeciesReference

543088
value: 0.0
type: LocalParameter

542958
value: -999999.0
type: LocalParameter

754401
stoichiometry: 2.0
species: 539783
type: SpeciesReference

541724
value: 0.0
type: LocalParameter

541024
product: 748005
notes: Abbreviation: R_NTD6 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : damp + h2o --> dad-2 + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 747993
reversible: false
kinetic law: 748017
type: Reaction
reactant: 747969
name: _5'-nucleotidase (dAMP)
reactant: 747981
fast: false

539706
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _1,4-Dihydroxy-2-naphthoate_C11H7O4
type: Species

543007
value: 999999.0
type: LocalParameter

542316
value: -999999.0
type: LocalParameter

542169
value: 0.0
type: LocalParameter

752731
stoichiometry: 1.0
species: 539778
type: SpeciesReference

745987
stoichiometry: 1.0
species: 539758
type: SpeciesReference

540364
reactant: 733820
notes: Abbreviation: R_ATPS4r Synonyms: _0 EC Number: 3.6.3.14 SUBSYSTEM: Oxidative Phosphorylation Equation: adp[c] + (4) h[e] + pi[c] <==> atp[c] + (3) h[c] + h2o[c] Confidence Level: 2 JLR- added reversible form of ATPS4 reactioin genes: LOCUS:BPLAN_560#ABBREVIATION:atpC#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_561#ABBREVIATION:atpD#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_078#ABBREVIATION:atpG#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_077#ABBREVIATION:atpA#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_076#ABBREVIATION:atpH#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_075#ABBREVIATION:atpF#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_074#ABBREVIATION:atpE#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_073#ABBREVIATION:atpB#ECNUMBERS:3.6.3.14# proteins: NAME:ATP synthase F1#ABBREVIATION:AtpF1# NAME:ATP synthase F0#ABBREVIATION:AtpF0# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_074 and BPLAN_075 and BPLAN_073) and (BPLAN_076 and BPLAN_077 and BPLAN_078 and BPLAN_561 and BPLAN_560)
reactant: 733844
type: Reaction
fast: false
product: 733881
name: ATP synthase (four protons for one ATP)
reversible: true
product: 733868
reactant: 733832
kinetic law: 733893
product: 733856

543771
value: 0.0
type: LocalParameter

541675
value: 0.0
type: LocalParameter

749454
stoichiometry: 1.0
species: 540074
type: SpeciesReference

541876
value: 0.0
type: LocalParameter

745249
stoichiometry: 1.0
species: 539944
type: SpeciesReference

542380
value: 0.0
type: LocalParameter

541723
value: 0.0
type: LocalParameter

542695
value: 999999.0
type: LocalParameter

542600
value: 0.0
type: LocalParameter

539707
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dihydroneopterin_C9H13N5O4
type: Species

733759
stoichiometry: 1.0
species: 539659
type: SpeciesReference

736278
stoichiometry: 1.0
species: 539659
type: SpeciesReference

539941
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Malate_C4H4O5
type: Species

734556
stoichiometry: 4.0
species: 539939
type: SpeciesReference

543666
value: 0.0
type: LocalParameter

747172
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species: 539695
type: SpeciesReference

743268
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species: 539657
type: SpeciesReference

733313
stoichiometry: 1.0
species: 539747
type: SpeciesReference

541661
value: 999999.0
type: LocalParameter

542603
value: 0.0
type: LocalParameter

734013
stoichiometry: 0.036
species: 539689
type: SpeciesReference

744630
stoichiometry: 1.0
species: 539605
type: SpeciesReference

541672
value: 0.0
type: LocalParameter

743892
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species: 539914
type: SpeciesReference

540139
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Fe2+_Fe
type: Species

543199
value: 0.0
type: LocalParameter

542956
value: 0.0
type: LocalParameter

751825
stoichiometry: 1.0
species: 540041
type: SpeciesReference

542692
value: 0.0
type: LocalParameter

747280
stoichiometry: 1.0
species: 539611
type: SpeciesReference

752587
stoichiometry: 1.0
species: 540013
type: SpeciesReference

543009
value: 0.0
type: LocalParameter

539708
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (S)-Dihydroorotate_C5H5N2O4
type: Species

746155
stoichiometry: 1.0
species: 539953
type: SpeciesReference

540361
product: 733783
reversible: false
notes: Abbreviation: R_ATPPRT Synonyms: _0 EC Number: 2.4.2.17 SUBSYSTEM: Histidine Metabolism Equation: [c] : atp + prpp --> ppi + prbatp Confidence Level: 2 genes: LOCUS:BPLAN_207#ABBREVIATION:hisG#ECNUMBERS:2.4.2.17# proteins: NAME:ATP phosphoribosyltransferase#ABBREVIATION:HisG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_207)
fast: false
product: 733795
kinetic law: 733807
reactant: 733759
name: ATP phosphoribosyltransferase
type: Reaction
reactant: 733771

751342
stoichiometry: 2.0
species: 539783
type: SpeciesReference

539942
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Malate_C4H4O5
type: Species

542167
value: 999999.0
type: LocalParameter

542314
value: 0.0
type: LocalParameter

541660
value: -999999.0
type: LocalParameter

541721
value: 999999.0
type: LocalParameter

541874
value: 0.0
type: LocalParameter

740875
stoichiometry: 1.0
species: 539744
type: SpeciesReference

731115
stoichiometry: 1.0
species: 539601
type: SpeciesReference

541673
value: 999999.0
type: LocalParameter

542602
value: 0.0
type: LocalParameter

540418
product: 735952
type: Reaction
notes: Abbreviation: R_CYSS Synonyms: _8 SUBSYSTEM: Cysteine Metabolism Equation: [c] : acser + h2s --> ac + cys-L + h Confidence Level: 2 EC changed to 2.5.1.47 from 4.2.99.8 genes: LOCUS:BPLAN_361#ABBREVIATION:cysK#ECNUMBERS:2.5.1.47# proteins: NAME:Cysteine synthase A#ABBREVIATION:CysK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_361)
fast: false
reactant: 735903
reactant: 735915
product: 735928
product: 735940
kinetic law: 735964
name: cysteine synthase
reversible: false

543087
value: 0.0
type: LocalParameter

542955
value: 0.0
type: LocalParameter

539798
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: IDP_C10H11N4O11P2
type: Species

748234
stoichiometry: 1.0
species: 539699
type: SpeciesReference

542693
value: 0.0
type: LocalParameter

733639
stoichiometry: 1.0
species: 539655
type: SpeciesReference

539709
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: (S)-Dihydroorotate_C5H5N2O4
type: Species

741058
stoichiometry: 2.0
species: 539783
type: SpeciesReference

757298
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543664
value: 999999.0
type: LocalParameter

753808
stoichiometry: 1.0
species: 539958
type: SpeciesReference

744315
stoichiometry: 1.0
species: 539524
type: SpeciesReference

741762
stoichiometry: 1.0
species: 539967
type: SpeciesReference

542313
value: 0.0
type: LocalParameter

539797
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Isochorismate_C10H8O6
type: Species

540982
product: 747160
type: Reaction
kinetic law: 747184
notes: Abbreviation: R_NDPK7 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dcdp <==> adp + dctp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
fast: false
product: 747172
reactant: 747136
name: nucleoside-diphosphate kinase (ATP:dCDP)
reversible: true
reactant: 747148

755269
stoichiometry: 1.0
species: 539659
type: SpeciesReference

539641
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: apoprotein [acyl carrier protein]_RHO
type: Species

542383
value: 999999.0
type: LocalParameter

753456
stoichiometry: 1.0
species: 540047
type: SpeciesReference

540367
reactant: 734290
reactant: 734001
product: 734435
notes: Abbreviation: R_BiomassPam Equation: [c] : (0.488) ala-L + (0.001) amp + (0.281) arg-L + (0.229) asn-L + (0.229) asp-L + (45.7318) atp + (0.000006) coa + (0.126) ctp + (0.087) cys-L + (0.036) datp + (0.014) dctp + (0.014) dgtp + (0.036) dttp + (0.00001) fad + (0.25) gln-L + (0.25) glu-L + (0.582) gly + (0.203) gtp + (45.5608) h2o + (0.09) his-L + (0.276) ile-L + (0.428) leu-L + (0.326) lys-L + (0.146) met-L + (0.00215) nad + (0.00005) nadh + (0.00013) nadp + (0.0004) nadph + (0.001935) pe_Bge + (0.0276) peptido_Bge + (0.176) phe-L + (0.21) pro-L + (0.000052) ps_Bge + (0.035) ptrc + (0.205) ser-L + (0.00005) thf + (0.000223) thmpp[c] + (0.241) thr-L + (0.054) trp-L + (0.131) tyr-L + (0.136) utp + (0.402) val-L --> (45.5608) adp + (45.56035) h + (45.5628) pi + (0.7302) ppi Confidence Level: genes: none proteins: none citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION:
reactant: 734374
reactant: 734025
reactant: 734061
reactant: 734399
reactant: 733989
reactant: 734110
kinetic law: 734459
reactant: 734206
reactant: 733905
reactant: 734302
reactant: 734278
reactant: 734362
reactant: 733929
fast: false
reactant: 733953
reactant: 734049
reactant: 734085
reactant: 734387
product: 734423
reactant: 733977
reactant: 734134
reactant: 734170
product: 734411
reactant: 734314
reactant: 734122
reactant: 734242
reactant: 734158
reversible: false
reactant: 734194
reactant: 734338
reactant: 733941
reactant: 734013
reactant: 734218
reactant: 733965
reactant: 734037
reactant: 734073
reactant: 734098
type: Reaction
reactant: 734230
reactant: 734146
reactant: 734182
reactant: 734326
reactant: 734266
name: R_BiomassPam
product: 734447
reactant: 734254
reactant: 734350
reactant: 733917

733047
stoichiometry: 1.0
species: 539967
type: SpeciesReference

541873
value: 0.0
type: LocalParameter

734098
stoichiometry: 0.582
species: 539762
type: SpeciesReference

541670
value: 0.0
type: LocalParameter

745465
stoichiometry: 1.0
species: 539947
type: SpeciesReference

737063
stoichiometry: 1.0
species: 539779
type: SpeciesReference

541093
product: 749514
reactant: 749478
reactant: 749490
type: Reaction
product: 749502
fast: false
reversible: false
notes: Abbreviation: R_PAPPT3 Synonyms: _0 EC Number: 2.7.8.13 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : udcpp + ugmda --> uagmda + ump Confidence Level: 2 genes: LOCUS:BPLAN_253#ABBREVIATION:mraY#ECNUMBERS:2.7.8.13# proteins: NAME:Phospho-N-acetylmuramoyl-pentapeptide transferase#ABBREVIATION:MraY# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_253)
kinetic law: 749526
name: phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)

735759
stoichiometry: 1.0
species: 539760
type: SpeciesReference

542690
value: 0.0
type: LocalParameter

539702
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dihydroxyacetone phosphate_C3H5O6P
type: Species

541727
value: 999999.0
type: LocalParameter

539796
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Hypoxanthine_C5H4N4O
type: Species

543085
value: 0.0
type: LocalParameter

736760
stoichiometry: 1.0
species: 539694
type: SpeciesReference

542311
value: 999999.0
type: LocalParameter

742367
stoichiometry: 1.0
species: 539756
type: SpeciesReference

741615
stoichiometry: 1.0
species: 539754
type: SpeciesReference

746992
stoichiometry: 1.0
species: 539720
type: SpeciesReference

541021
name: _5'-nucleotidase (dTMP)
reactant: 747920
reactant: 747908
product: 747945
product: 747932
notes: Abbreviation: R_NTD5 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Sugar Metabolism Equation: [c] : dtmp + h2o --> pi + thymd Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
type: Reaction
fast: false
kinetic law: 747957
reversible: false

543002
value: 0.0
type: LocalParameter

539643
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Arginine_C6H15N4O2
type: Species

539795
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Homoserine_C4H9NO3
type: Species

735271
stoichiometry: 2.0
species: 539779
type: SpeciesReference

732261
stoichiometry: 1.0
species: 540013
type: SpeciesReference

731777
stoichiometry: 1.0
species: 539490
type: SpeciesReference

541726
value: 0.0
type: LocalParameter

540415
fast: false
reversible: false
notes: Abbreviation: R_CYSabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + cys-L[e] + h2o[c] --> adp[c] + cys-L[c] + h[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 735819
reactant: 735807
product: 735879
reactant: 735831
name: L-cysteine transport via ABC system
kinetic law: 735891
product: 735867
product: 735843
product: 735855
type: Reaction

730643
stoichiometry: 1.0
species: 539597
type: SpeciesReference

748889
stoichiometry: 1.0
species: 540021
type: SpeciesReference

541871
value: 999999.0
type: LocalParameter

732574
stoichiometry: 1.0
species: 539626
type: SpeciesReference

737571
stoichiometry: 1.0
species: 539708
type: SpeciesReference

542310
value: 0.0
type: LocalParameter

747920
stoichiometry: 1.0
species: 539779
type: SpeciesReference

745889
stoichiometry: 1.0
species: 539952
type: SpeciesReference

543669
value: 0.0
type: LocalParameter

543005
value: -999999.0
type: LocalParameter

539704
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _7,8-Dihydrofolate_C19H19N7O6
type: Species

753894
stoichiometry: 1.0
species: 539797
type: SpeciesReference

746360
stoichiometry: 1.0
species: 539504
type: SpeciesReference

754146
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543083
value: 999999.0
type: LocalParameter

737703
stoichiometry: 1.0
species: 539566
type: SpeciesReference

539794
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Hydroxymethylbilane_C40H38N4O17
type: Species

746905
stoichiometry: 1.0
species: 539663
type: SpeciesReference

541910
value: 0.0
type: LocalParameter

541447
reactant: 757395
product: 757419
product: 757407
fast: false
kinetic law: 757431
reversible: true
type: Reaction
notes: Abbreviation: R_VALTA Synonyms: _0 EC Number: 2.6.1.42 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : akg + val-L <==> 3mob + glu-L Confidence Level: 2 genes: LOCUS:BPLAN_185#ABBREVIATION:ilvE#ECNUMBERS:2.6.1.42,-!-,2.6.1.2# proteins: NAME:Branched-chain-amino-acid aminotransferase#ABBREVIATION:IlvE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_185)
name: valine transaminase
reactant: 757383

542382
value: 0.0
type: LocalParameter

748149
stoichiometry: 1.0
species: 539772
type: SpeciesReference

541870
value: 0.0
type: LocalParameter

541090
reactant: 749418
fast: false
name: _2-oxoglutarate decarboxylase
type: Reaction
notes: Abbreviation: R_OXGDC2 Synonyms: _1 EC Number: 4.1.1.71 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : akg + h + thmpp --> co2 + ssaltpp Confidence Level: 2 JLR genes: LOCUS:BPLAN_577#ABBREVIATION:menD#ECNUMBERS:4.1.1.71,-!-,2.2.1.9# proteins: NAME:bifunctional 2-oxoglutarate decarboxylase/2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase#ABBREVIATION:MenD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_577)
reactant: 749430
product: 749442
reactant: 749406
product: 749454
kinetic law: 749466
reversible: false

543668
value: 0.0
type: LocalParameter

740007
stoichiometry: 1.0
species: 540016
type: SpeciesReference

733203
stoichiometry: 1.0
species: 539673
type: SpeciesReference

744147
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543004
value: 0.0
type: LocalParameter

750689
stoichiometry: 1.0
species: 540018
type: SpeciesReference

737643
stoichiometry: 1.0
species: 539708
type: SpeciesReference

542398
value: 0.0
type: LocalParameter

736808
stoichiometry: 1.0
species: 539970
type: SpeciesReference

742127
stoichiometry: 1.0
species: 539970
type: SpeciesReference

543214
value: 0.0
type: LocalParameter

757346
stoichiometry: 1.0
species: 540013
type: SpeciesReference

543648
value: 0.0
type: LocalParameter

742599
stoichiometry: 1.0
species: 539776
type: SpeciesReference

540547
kinetic law: 738763
product: 738751
reactant: 738739
notes: Abbreviation: R_EX_ac_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : ac <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Acetate exchange
type: Reaction

746833
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543293
value: 999999.0
type: LocalParameter

541926
value: 0.0
type: LocalParameter

542487
value: 0.0
type: LocalParameter

541717
value: 0.0
type: LocalParameter

542172
value: -999999.0
type: LocalParameter

540760
kinetic law: 742042
product: 742029
reactant: 742017
notes: Abbreviation: R_GLYALDt Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: glyald[e] <==> glyald[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_180#ABBREVIATION:glpF# proteins: NAME:MIP channel, glycerol diffusion#ABBREVIATION:GlpF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_180)
fast: false
reversible: true
name: Glyceraldehyde facilitated diffusion
type: Reaction

540499
reversible: false
fast: false
notes: Abbreviation: R_DHPPDA2 Synonyms: _0 EC Number: 3.5.4.26 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 25drapp + h + h2o --> 5apru + nh4 Confidence Level: 2 Riboflavin-specific deaminaseAR genes: LOCUS:BPLAN_491#ABBREVIATION:ribD#ECNUMBERS:3.5.4.26,-!-,1.1.1.193# proteins: NAME:pyrimidine deaminase and pyrimidine reductase#ABBREVIATION:RibD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_491)
kinetic law: 737727
product: 737703
type: Reaction
reactant: 737667
reactant: 737691
reactant: 737679
name: diaminohydroxyphosphoribosylaminopryrimidine deaminase (25drapp)
product: 737715

740658
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540156
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: potassium_K
type: Species

540652
kinetic law: 740032
product: 740020
reactant: 740007
notes: Abbreviation: R_EX_pnto_R_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : pnto-R <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: (R)-Pantothenate exchange
type: Reaction

542397
value: 0.0
type: LocalParameter

741555
stoichiometry: 1.0
species: 539760
type: SpeciesReference

543435
value: 0.0
type: LocalParameter

731693
stoichiometry: 1.0
species: 539638
type: SpeciesReference

539647
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N(omega)-(L-Arginino)succinate_C10H17N4O6
type: Species

737291
stoichiometry: 1.0
species: 539783
type: SpeciesReference

756780
stoichiometry: 1.0
species: 539632
type: SpeciesReference

736049
stoichiometry: 2.5
species: 539783
type: SpeciesReference

543328
value: 999999.0
type: LocalParameter

742440
stoichiometry: 2.0
species: 539783
type: SpeciesReference

541925
value: 0.0
type: LocalParameter

541718
value: 0.0
type: LocalParameter

754620
stoichiometry: 1.0
species: 540078
type: SpeciesReference

541645
value: 0.0
type: LocalParameter

543540
value: 0.0
type: LocalParameter

540155
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Isoleucine_C6H13NO2
type: Species

543325
value: 0.0
type: LocalParameter

738895
stoichiometry: 1.0
species: 540134
type: SpeciesReference

543295
value: 0.0
type: LocalParameter

541231
kinetic law: 752623
product: 752599
reactant: 752575
type: Reaction
reactant: 752587
notes: Abbreviation: R_PUNP6 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : din + pi <==> 2dr1p + hxan Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferase genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
product: 752611
fast: false
reversible: true
name: purine-nucleoside phosphorylase (Deoxyinosine)

541646
value: 0.0
type: LocalParameter

756429
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542061
value: 0.0
type: LocalParameter

741956
stoichiometry: 1.0
species: 539761
type: SpeciesReference

543081
value: 0.0
type: LocalParameter

747208
stoichiometry: 1.0
species: 539687
type: SpeciesReference

543437
value: 0.0
type: LocalParameter

543542
value: 0.0
type: LocalParameter

543326
value: -999999.0
type: LocalParameter

751125
stoichiometry: 1.0
species: 540006
type: SpeciesReference

743488
stoichiometry: 1.0
species: 539919
type: SpeciesReference

753821
stoichiometry: 1.0
species: 540056
type: SpeciesReference

543213
value: 0.0
type: LocalParameter

752659
stoichiometry: 1.0
species: 540040
type: SpeciesReference

539645
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Arginine_C6H15N4O2
type: Species

542488
value: 0.0
type: LocalParameter

749925
stoichiometry: 1.0
species: 539964
type: SpeciesReference

541923
value: 999999.0
type: LocalParameter

741130
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540655
kinetic law: 740068
product: 740056
reactant: 740044
notes: Abbreviation: R_EX_ppbng_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : ppbng <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Porphobilinogen exchange
type: Reaction

542173
value: 999999.0
type: LocalParameter

732925
stoichiometry: 1.0
species: 539756
type: SpeciesReference

541468
value: 0.0
type: LocalParameter

540157
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Leucine_C6H13NO2
type: Species

749225
stoichiometry: 1.0
species: 539526
type: SpeciesReference

543080
value: 0.0
type: LocalParameter

544058
value: 0.0
type: LocalParameter

736905
stoichiometry: 1.0
species: 539727
type: SpeciesReference

750895
stoichiometry: 1.0
species: 539558
type: SpeciesReference

543438
value: 0.0
type: LocalParameter

541640
value: 0.0
type: LocalParameter

542176
value: 0.0
type: LocalParameter

735042
stoichiometry: 6.0
species: 539939
type: SpeciesReference

740080
stoichiometry: 1.0
species: 540029
type: SpeciesReference

540877
fast: false
reactant: 744606
product: 744630
notes: Abbreviation: R_KAS15 Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : accoa + h + malACP --> actACP + co2 + coa Confidence Level: 2 tvAMF genes: LOCUS:BPLAN_524#ABBREVIATION:fabH#ECNUMBERS:2.3.1.41# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase#ABBREVIATION:FabH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_524)
kinetic law: 744667
reversible: false
type: Reaction
name: beta-ketoacyl-ACP synthase (2)
product: 744655
reactant: 744594
product: 744642
reactant: 744618

539588
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Acetyl-ACP_C13H23N2O8PRS
type: Species

730850
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542482
value: 0.0
type: LocalParameter

743501
stoichiometry: 1.0
species: 539622
type: SpeciesReference

543211
value: 0.0
type: LocalParameter

739293
stoichiometry: 1.0
species: 540146
type: SpeciesReference

746288
stoichiometry: 3.8
species: 539783
type: SpeciesReference

540763
product: 742115
product: 742103
product: 742127
notes: Abbreviation: R_GLYCL Synonyms: _0 SUBSYSTEM: Folate Metabolism Equation: [c] : gly + nad + thf --> co2 + mlthf + nadh + nh4 Confidence Level: 2 genes: LOCUS:BPLAN_486#ABBREVIATION:lpd#ECNUMBERS:1.8.1.4# LOCUS:BPLAN_025#ABBREVIATION:gcvP#ECNUMBERS:1.4.4.2# LOCUS:BPLAN_223#ABBREVIATION:gcvH# LOCUS:BPLAN_447#ABBREVIATION:gcvT#ECNUMBERS:2.1.2.10# proteins: NAME:Glycine cleavage complex, T#ABBREVIATION:GcvT# NAME:glycine cleavage complex, H#ABBREVIATION:GcvH# NAME:Glycine cleavage complex, P#ABBREVIATION:GcvP# NAME:dihydrolipoamide dehydrogenase#ABBREVIATION:LpdA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_486) and (BPLAN_025) and (BPLAN_447) and (BPLAN_223)
reactant: 742054
kinetic law: 742139
reactant: 742078
product: 742091
name: Glycine Cleavage System
reactant: 742066
fast: false
reversible: false
type: Reaction

731825
stoichiometry: 1.0
species: 539653
type: SpeciesReference

540159
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Lysine_C6H15N2O2
type: Species

542175
value: 0.0
type: LocalParameter

541676
value: 0.0
type: LocalParameter

541462
value: 0.0
type: LocalParameter

752515
stoichiometry: 1.0
species: 539924
type: SpeciesReference

741409
stoichiometry: 1.0
species: 540083
type: SpeciesReference

753011
stoichiometry: 1.0
species: 539738
type: SpeciesReference

742029
stoichiometry: 1.0
species: 539764
type: SpeciesReference

541929
value: 999999.0
type: LocalParameter

756573
stoichiometry: 1.0
species: 539783
type: SpeciesReference

735915
stoichiometry: 1.0
species: 539781
type: SpeciesReference

542178
value: -999999.0
type: LocalParameter

734423
stoichiometry: 45.56035
species: 539783
type: SpeciesReference

736530
stoichiometry: 1.0
species: 539496
type: SpeciesReference

541465
value: 999999.0
type: LocalParameter

732043
stoichiometry: 1.0
species: 539969
type: SpeciesReference

541642
value: -999999.0
type: LocalParameter

754969
stoichiometry: 1.0
species: 540087
type: SpeciesReference

542485
value: 999999.0
type: LocalParameter

732374
stoichiometry: 1.0
species: 539966
type: SpeciesReference

543291
value: 0.0
type: LocalParameter

541679
value: 999999.0
type: LocalParameter

752719
stoichiometry: 1.0
species: 540035
type: SpeciesReference

737436
stoichiometry: 1.0
species: 539706
type: SpeciesReference

539649
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Asparagine_C4H8N2O3
type: Species

542484
value: 0.0
type: LocalParameter

755475
stoichiometry: 1.0
species: 539749
type: SpeciesReference

734908
stoichiometry: 20.0
species: 539783
type: SpeciesReference

750045
stoichiometry: 1.0
species: 539542
type: SpeciesReference

543290
value: 0.0
type: LocalParameter

541678
value: 0.0
type: LocalParameter

541643
value: 999999.0
type: LocalParameter

540874
notes: Abbreviation: R_KAS14 Synonyms: _0 EC Number: 2.3.1.41 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : acACP + h + malACP --> ACP + actACP + co2 Confidence Level: 2 tvAMF genes: LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_555)
type: Reaction
product: 744545
name: beta-ketoacyl-ACP synthase
kinetic law: 744582
fast: false
reactant: 744509
reactant: 744521
reversible: false
reactant: 744533
product: 744570
product: 744558

540496
kinetic law: 737655
product: 737643
reactant: 737631
notes: Abbreviation: R_dhorSt Synonyms: _0 Equation: dhor-S[e] <==> dhor-S[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: S-Dihydroorotate transporter
type: Reaction

740549
stoichiometry: 1.0
species: 539779
type: SpeciesReference

741493
stoichiometry: 1.0
species: 539966
type: SpeciesReference

733953
stoichiometry: 0.229
species: 539653
type: SpeciesReference

541927
value: 0.0
type: LocalParameter

542771
value: 999999.0
type: LocalParameter

540217
reversible: false
product: 730618
kinetic law: 730630
notes: Abbreviation: R_ACCOACr Synonyms: _0 EC Number: 6.4.1.2 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : accoa + atp + hco3 --> adp + h + malcoa + pi Confidence Level: 2 NCD genes: LOCUS:BPLAN_479#ABBREVIATION:accA#ECNUMBERS:6.4.1.2# LOCUS:BPLAN_162#ABBREVIATION:accD#ECNUMBERS:6.4.1.2# LOCUS:BPLAN_124#ABBREVIATION:accB# LOCUS:BPLAN_123#ABBREVIATION:accC#ECNUMBERS:6.3.4.14# proteins: NAME:AcetylCoA carboxylase#ABBREVIATION:Acc# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_479 and BPLAN_124 and BPLAN_123 and BPLAN_162)
product: 730606
reactant: 730569
type: Reaction
name: acetyl-CoA carboxylase, reversible reaction
fast: false
reactant: 730557
product: 730581
reactant: 730545
product: 730594

539584
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Acetate_C2H3O2
type: Species

541237
kinetic law: 752768
notes: Abbreviation: R_PYAM5PO Synonyms: _0 EC Number: 1.4.3.5 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : h2o + o2 + pyam5p --> h2o2 + nh4 + pydx5p Confidence Level: 2 NCD genes: LOCUS:BPLAN_583#ABBREVIATION:pdxH#ECNUMBERS:1.4.3.5# proteins: NAME:Pyridoxine 5-phosphate oxidase#ABBREVIATION:PdxH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_583)
name: pyridoxamine 5'-phosphate oxidase
type: Reaction
reversible: false
product: 752744
reactant: 752719
product: 752731
reactant: 752695
product: 752756
reactant: 752707
fast: false

735151
stoichiometry: 22.0
species: 539783
type: SpeciesReference

544054
value: 0.0
type: LocalParameter

540979
product: 747112
product: 747100
kinetic law: 747124
name: nucleoside-diphosphate kinase (ATP:dUDP)
reactant: 747088
fast: false
type: Reaction
reactant: 747076
notes: Abbreviation: R_NDPK6 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dudp <==> adp + dutp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
reversible: true

540003
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Pyridoxine 5'-phosphate_C8H10NO6P
type: Species

542805
value: -999999.0
type: LocalParameter

542549
value: -999999.0
type: LocalParameter

542067
value: 0.0
type: LocalParameter

739185
stoichiometry: 1.0
species: 540143
type: SpeciesReference

540084
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Thiamin_C12H17N4OS
type: Species

543547
value: 0.0
type: LocalParameter

744002
stoichiometry: 1.0
species: 539920
type: SpeciesReference

542772
value: 0.0
type: LocalParameter

755523
stoichiometry: 1.0
species: 540092
type: SpeciesReference

542804
value: 0.0
type: LocalParameter

540002
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Adenosine 3',5'-bisphosphate_C10H11N5O10P2
type: Species

748816
stoichiometry: 1.0
species: 539700
type: SpeciesReference

749598
stoichiometry: 0.1
species: 540081
type: SpeciesReference

742866
stoichiometry: 1.0
species: 539785
type: SpeciesReference

752878
stoichiometry: 1.0
species: 540013
type: SpeciesReference

540085
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Thiamin_C12H17N4OS
type: Species

540490
kinetic law: 737559
product: 737547
product: 737535
reactant: 737523
notes: Abbreviation: R_DHNPA2 Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : dhnpt <==> 6hmhpt + gcald Confidence Level: 2 JLR- similar to DHNPA except the 'pterin product is different genes: LOCUS:BPLAN_348#ABBREVIATION:folB#ECNUMBERS:4.1.2.25# proteins: NAME:dihydroneopterin aldolase#ABBREVIATION:FolB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_348)
fast: false
reversible: true
name: dihydroneopterin aldolase
type: Reaction

742513
stoichiometry: 1.0
species: 540021
type: SpeciesReference

541381
reactant: 755835
reversible: true
product: 755859
reactant: 755847
kinetic law: 755883
fast: false
notes: Abbreviation: R_TRPt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + trp-L[e] <==> h[c] + trp-L[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
type: Reaction
product: 755871
name: L-tryptophan reversible transport via proton symport

735527
stoichiometry: 1.0
species: 539779
type: SpeciesReference

748671
stoichiometry: 1.0
species: 539719
type: SpeciesReference

540766
product: 742175
fast: false
type: Reaction
reactant: 742151
reactant: 742163
notes: Abbreviation: R_GLYCLTt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: glyclt[e] + h[e] <==> glyclt[c] + h[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
product: 742187
kinetic law: 742199
reversible: true
name: glycolate transport via proton symport, reversible

544056
value: 999999.0
type: LocalParameter

756645
stoichiometry: 1.0
species: 539779
type: SpeciesReference

539586
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Acetate_C2H3O2
type: Species

540871
product: 744473
kinetic law: 744497
name: ketol-acid reductoisomerase (2-Aceto-2-hydroxybutanoate)
notes: Abbreviation: R_KARA2i Synonyms: _0 EC Number: 1.1.1.86 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 2ahbut + h + nadph --> 23dhmp + nadp Confidence Level: 2 JLR - added irreversible form of KARA2 genes: LOCUS:BPLAN_086#ABBREVIATION:ilvC#ECNUMBERS:1.1.1.86# proteins: NAME:acetohydroxy acid isomeroreductase#ABBREVIATION:IlvC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_086)
fast: false
reactant: 744449
reactant: 744461
reactant: 744437
reversible: false
type: Reaction
product: 744485

543858
value: -999999.0
type: LocalParameter

752007
stoichiometry: 1.0
species: 539542
type: SpeciesReference

540541
product: 738640
reactant: 738628
reactant: 738616
type: Reaction
fast: false
product: 738666
name: Erythrose 4-phosphate dehydrogenase
reversible: true
reactant: 738604
product: 738653
notes: Abbreviation: R_E4PD Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : e4p + h2o + nad <==> 4per + (2) h + nadh Confidence Level: 2 JLR- Reaction from KEGG R01825 genes: LOCUS:BPLAN_590#ABBREVIATION:gapA#ECNUMBERS:1.2.1.9# proteins: NAME:Erythrose-4-phosphate dehydrogenase#ABBREVIATION:gapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_590)
kinetic law: 738678

540005
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Phosphoenolpyruvate_C3H2O6P
type: Species

737219
stoichiometry: 1.0
species: 540038
type: SpeciesReference

540493
reactant: 737583
notes: Abbreviation: R_DHORD5 Synonyms: _0 EC Number: 1.3.3.1 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : dhor-S + mqn8 --> mql8 + orot Confidence Level: 2 JLR genes: LOCUS:BPLAN_127#ABBREVIATION:pyrD#ECNUMBERS:1.3.3.1# proteins: NAME:Dihydroorotate dehydrogenase#ABBREVIATION:PyrD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_127)
fast: false
reversible: false
type: Reaction
name: dihydroorotic acid (menaquinone-8)
kinetic law: 737619
product: 737595
product: 737607
reactant: 737571

540082
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2,3,4,5-Tetrahydrodipicolinate_C7H7NO4
type: Species

754595
stoichiometry: 1.0
species: 539611
type: SpeciesReference

540150
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Glycolate_C2H3O3
type: Species

738051
stoichiometry: 1.0
species: 539779
type: SpeciesReference

541384
notes: Abbreviation: R_TYRt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + tyr-L[e] <==> h[c] + tyr-L[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
type: Reaction
reactant: 755907
name: L-tyrosine reversible transport via proton symport
reactant: 755895
product: 755920
fast: false
kinetic law: 755944
reversible: true
product: 755932

735637
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543549
value: 0.0
type: LocalParameter

757407
stoichiometry: 1.0
species: 539536
type: SpeciesReference

734993
stoichiometry: 1.0
species: 540000
type: SpeciesReference

542548
value: 0.0
type: LocalParameter

540004
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Phosphatidylethanolamine (Blattabacterium Periplaneta americana)_C1936H3748N50O400P50
type: Species

736422
stoichiometry: 1.0
species: 539779
type: SpeciesReference

542802
value: 0.0
type: LocalParameter

737147
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540083
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5,6,7,8-Tetrahydrofolate_C19H21N7O6
type: Species

542068
value: 0.0
type: LocalParameter

743757
stoichiometry: 1.0
species: 539779
type: SpeciesReference

756936
stoichiometry: 1.0
species: 539659
type: SpeciesReference

742928
stoichiometry: 1.0
species: 539611
type: SpeciesReference

746772
stoichiometry: 1.0
species: 539659
type: SpeciesReference

542801
value: 999999.0
type: LocalParameter

539580
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _6-hydroxymethyl dihydropterin_C7H9N5O2
type: Species

540213
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Valine_C5H11NO2
type: Species

543430
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type: LocalParameter

751691
stoichiometry: 1.0
species: 540013
type: SpeciesReference

740767
stoichiometry: 1.0
species: 539574
type: SpeciesReference

543297
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type: LocalParameter

542775
value: 0.0
type: LocalParameter

541648
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type: LocalParameter

543323
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type: LocalParameter

543218
value: 0.0
type: LocalParameter

745261
stoichiometry: 1.0
species: 539677
type: SpeciesReference

543543
value: 0.0
type: LocalParameter

543757
value: 0.0
type: LocalParameter

739077
stoichiometry: 1.0
species: 540139
type: SpeciesReference

540152
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Hydrogen sulfide_H2S
type: Species

542289
value: 0.0
type: LocalParameter

542062
value: 0.0
type: LocalParameter

754511
stoichiometry: 1.0
species: 539955
type: SpeciesReference

543857
value: 0.0
type: LocalParameter

540544
kinetic law: 738727
product: 738715
product: 738703
reactant: 738690
notes: Abbreviation: R_ENO Synonyms: _0 EC Number: 4.2.1.11 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : 2pg <==> h2o + pep Confidence Level: 2 SMP genes: LOCUS:BPLAN_372#ABBREVIATION:eno#ECNUMBERS:4.2.1.11# proteins: NAME:enolase#ABBREVIATION:Eno# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_372)
fast: false
reversible: true
name: enolase
type: Reaction

743377
stoichiometry: 1.0
species: 539783
type: SpeciesReference

745537
stoichiometry: 1.0
species: 539659
type: SpeciesReference

544051
value: 0.0
type: LocalParameter

541649
value: 999999.0
type: LocalParameter

743588
stoichiometry: 1.0
species: 540027
type: SpeciesReference

751728
stoichiometry: 1.0
species: 540027
type: SpeciesReference

755053
stoichiometry: 1.0
species: 540087
type: SpeciesReference

540151
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: H2O_H2O
type: Species

543431
value: 0.0
type: LocalParameter

749683
stoichiometry: 1.0
species: 539590
type: SpeciesReference

747872
stoichiometry: 1.0
species: 539685
type: SpeciesReference

540081
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: cis-tetradec-7-enoyl-[acyl-carrier protein] (n-C14:1)_C25H45N2O8PRS
type: Species

540154
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Histidine_C6H9N3O2
type: Species

540001
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Pantetheine 4'-phosphate_C11H21N2O7PS
type: Species

539582
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _6-hydroxymethyl-dihydropterin pyrophosphate_C7H8N5O8P2
type: Species

542065
value: 999999.0
type: LocalParameter

741847
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543190
value: 0.0
type: LocalParameter

747317
stoichiometry: 1.0
species: 539972
type: SpeciesReference

542170
value: 0.0
type: LocalParameter

749817
stoichiometry: 1.0
species: 540012
type: SpeciesReference

741286
stoichiometry: 1.0
species: 539964
type: SpeciesReference

540658
kinetic law: 740104
product: 740092
reactant: 740080
notes: Abbreviation: R_EX_pro_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : pro-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Proline exchange
type: Reaction

541162
product: 751064
reversible: false
name: prephenate dehydratase
notes: Abbreviation: R_PPNDH Synonyms: _0 EC Number: 4.2.1.51 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : h + pphn --> co2 + h2o + phpyr Confidence Level: 2 genes: LOCUS:BPLAN_299#ABBREVIATION:pheA#ECNUMBERS:5.4.99.5,-!-,4.2.1.51# proteins: NAME:Chorismate mutase P#ABBREVIATION:PheA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_299)
fast: false
type: Reaction
kinetic law: 751088
product: 751076
reactant: 751040
reactant: 751027
product: 751052

743613
stoichiometry: 1.0
species: 539728
type: SpeciesReference

543759
value: 0.0
type: LocalParameter

543216
value: 999999.0
type: LocalParameter

751618
stoichiometry: 1.0
species: 539756
type: SpeciesReference

543321
value: 999999.0
type: LocalParameter

738399
stoichiometry: 1.0
species: 539724
type: SpeciesReference

736639
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543545
value: 999999.0
type: LocalParameter

738207
stoichiometry: 1.0
species: 539611
type: SpeciesReference

540214
reactant: 730485
reversible: false
type: Reaction
reactant: 730497
notes: Abbreviation: R_4HTHRS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : h2o + phthr --> 4hthr + pi Confidence Level: 2 JLR genes: LOCUS:BPLAN_140#ABBREVIATION:thrC#ECNUMBERS:4.2.3.1# proteins: NAME:Threonine synthase#ABBREVIATION:ThrC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_140)
product: 730521
fast: false
kinetic law: 730533
name: _4-Hydroxy-L-threonine synthase
product: 730509

540000
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Palmitoyl-ACP (n-C16:0ACP)_C27H51N2O8PRS
type: Species

542064
value: 0.0
type: LocalParameter

540153
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: H+_H
type: Species

734374
stoichiometry: 0.131
species: 540096
type: SpeciesReference

541234
name: purine-nucleoside phosphorylase (Xanthosine)
reactant: 752647
notes: Abbreviation: R_PUNP7 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : pi + xtsn <==> r1p + xan Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferasextsn genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
kinetic law: 752683
reversible: true
product: 752671
product: 752659
reactant: 752635
fast: false
type: Reaction

540769
kinetic law: 742235
product: 742223
reactant: 742211
notes: Abbreviation: R_GLYCt Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: glyc[c] <==> glyc[e] Confidence Level: 2 NCD genes: LOCUS:BPLAN_180#ABBREVIATION:glpF# proteins: NAME:MIP channel, glycerol diffusion#ABBREVIATION:GlpF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_180)
fast: false
reversible: true
name: glycerol transport via channel
type: Reaction

541387
product: 755994
type: Reaction
notes: Abbreviation: R_TYRTA Synonyms: _13 EC Number: 2.6.1.5 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : akg + tyr-L <==> 34hpp + glu-L Confidence Level: 2 genes: LOCUS:BPLAN_285#ABBREVIATION:aspC#ECNUMBERS:2.6.1.1# LOCUS:BPLAN_298#ABBREVIATION:tyrB#ECNUMBERS:2.6.1.57# proteins: NAME:Tyrosine aminotransferase#ABBREVIATION:TyrB# NAME:aspartate aminotransferase#ABBREVIATION:AspC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_298) or (BPLAN_285)
reactant: 755969
name: tyrosine transaminase
reversible: true
kinetic law: 756006
fast: false
product: 755981
reactant: 755956

543298
value: -999999.0
type: LocalParameter

542774
value: 0.0
type: LocalParameter

543855
value: 0.0
type: LocalParameter

544053
value: 0.0
type: LocalParameter

744740
stoichiometry: 1.0
species: 539601
type: SpeciesReference

753978
stoichiometry: 1.0
species: 539783
type: SpeciesReference

753602
stoichiometry: 1.0
species: 540068
type: SpeciesReference

543433
value: 999999.0
type: LocalParameter

753132
stoichiometry: 1.0
species: 539560
type: SpeciesReference

751426
stoichiometry: 1.0
species: 539562
type: SpeciesReference

732793
stoichiometry: 1.0
species: 539636
type: SpeciesReference

543766
value: 0.0
type: LocalParameter

753542
stoichiometry: 1.0
species: 540068
type: SpeciesReference

737363
stoichiometry: 1.0
species: 539711
type: SpeciesReference

543102
value: 0.0
type: LocalParameter

542554
value: 0.0
type: LocalParameter

541018
name: _5'-nucleotidase (CMP)
reactant: 747860
type: Reaction
kinetic law: 747896
notes: Abbreviation: R_NTD4 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : cmp + h2o --> cytd + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 747884
product: 747872
reversible: false
reactant: 747848
fast: false

539712
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Deoxyinosine_C10H12N4O4
type: Species

543865
value: 0.0
type: LocalParameter

732490
stoichiometry: 1.0
species: 539659
type: SpeciesReference

540220
reactant: 730655
notes: Abbreviation: R_ACGK Synonyms: _0 EC Number: 2.7.2.8 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : acglu + atp --> acg5p + adp Confidence Level: 2 genes: LOCUS:BPLAN_321#ABBREVIATION:argB#ECNUMBERS:2.7.2.8# proteins: NAME:acetylglutamate kinase#ABBREVIATION:ArgB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_321)
fast: false
name: acetylglutamate kinase
product: 730667
kinetic law: 730692
type: Reaction
product: 730680
reactant: 730643
reversible: false

542768
value: 0.0
type: LocalParameter

542960
value: 999999.0
type: LocalParameter

542284
value: 0.0
type: LocalParameter

750919
stoichiometry: 1.0
species: 539783
type: SpeciesReference

746408
stoichiometry: 1.0
species: 539964
type: SpeciesReference

752951
stoichiometry: 1.0
species: 540038
type: SpeciesReference

756357
stoichiometry: 1.0
species: 540111
type: SpeciesReference

746566
stoichiometry: 1.0
species: 539964
type: SpeciesReference

745767
stoichiometry: 1.0
species: 539948
type: SpeciesReference

543101
value: 0.0
type: LocalParameter

743941
stoichiometry: 1.0
species: 539742
type: SpeciesReference

750786
stoichiometry: 1.0
species: 539659
type: SpeciesReference

754268
stoichiometry: 1.0
species: 540075
type: SpeciesReference

732165
stoichiometry: 1.0
species: 540083
type: SpeciesReference

730741
stoichiometry: 1.0
species: 539677
type: SpeciesReference

543864
value: 0.0
type: LocalParameter

731549
stoichiometry: 1.0
species: 539776
type: SpeciesReference

751570
stoichiometry: 1.0
species: 540024
type: SpeciesReference

749165
stoichiometry: 1.0
species: 539636
type: SpeciesReference

541165
product: 751137
product: 751113
product: 751125
type: Reaction
notes: Abbreviation: R_PPTGS_Pam Synonyms: _0 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : uaagmda --> h + peptido_Pam + udcpdp Confidence Level: 2 JLR- the production of a subunit of peptidoglycantv- H pylori also uses the same form genes: LOCUS:BPLAN_356#ABBREVIATION:mrcA#ECNUMBERS:2.4.1.129# proteins: NAME:peptidoglycan synthetase; penicillin-binding protein 1A#ABBREVIATION:MrcA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_356)
name: Peptidoglycan subunit synthesis
fast: false
kinetic law: 751149
reactant: 751101
reversible: false

539710
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dihydroneopterin monophosphate_C9H12N5O7P
type: Species

544061
value: -999999.0
type: LocalParameter

542766
value: 0.0
type: LocalParameter

543181
value: 999999.0
type: LocalParameter

542552
value: 0.0
type: LocalParameter

542286
value: 0.0
type: LocalParameter

739837
stoichiometry: 1.0
species: 540165
type: SpeciesReference

542962
value: 0.0
type: LocalParameter

737991
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543767
value: 0.0
type: LocalParameter

739983
stoichiometry: 1.0
species: 540177
type: SpeciesReference

745913
stoichiometry: 1.0
species: 539576
type: SpeciesReference

542287
value: 999999.0
type: LocalParameter

735855
stoichiometry: 1.0
species: 539682
type: SpeciesReference

755101
stoichiometry: 1.0
species: 539749
type: SpeciesReference

750459
stoichiometry: 1.0
species: 539570
type: SpeciesReference

752166
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540973
reactant: 746954
reactant: 746966
product: 746992
notes: Abbreviation: R_NDPK4 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dtdp <==> adp + dttp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
kinetic law: 747004
reversible: true
type: Reaction
product: 746979
fast: false
name: nucleoside-diphosphate kinase (ATP:dTDP)

539711
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dihydropteroate_C14H13N6O3
type: Species

542551
value: 999999.0
type: LocalParameter

543862
value: 0.0
type: LocalParameter

542765
value: 999999.0
type: LocalParameter

540400
kinetic law: 735502
product: 735490
product: 735477
reactant: 735465
notes: Abbreviation: R_CHORS Synonyms: _0 EC Number: 4.2.3.5 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 3psme --> chor + pi Confidence Level: 2 Previously EC 4.6.1.4. Now EC 4.2.3.5 genes: LOCUS:BPLAN_450#ABBREVIATION:aroC#ECNUMBERS:4.2.3.5# proteins: NAME:Chorismate synthase#ABBREVIATION:AroC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_450)
fast: false
reversible: false
name: chorismate synthase
type: Reaction

544060
value: 0.0
type: LocalParameter

540223
product: 730753
reactant: 730705
fast: false
kinetic law: 730765
reactant: 730717
notes: Abbreviation: R_ACGS Synonyms: _0 EC Number: 2.3.1.1 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : accoa + glu-L --> acglu + coa + h Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
name: N-acetylglutamate synthase
reversible: false
product: 730741
type: Reaction
product: 730729

738291
stoichiometry: 1.0
species: 539611
type: SpeciesReference

755197
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543106
value: 0.0
type: LocalParameter

543762
value: 999999.0
type: LocalParameter

744533
stoichiometry: 1.0
species: 539939
type: SpeciesReference

747076
stoichiometry: 1.0
species: 539659
type: SpeciesReference

745804
stoichiometry: 1.0
species: 539952
type: SpeciesReference

744413
stoichiometry: 1.0
species: 539967
type: SpeciesReference

541228
name: purine-nucleoside phosphorylase (Inosine)
reactant: 752515
notes: Abbreviation: R_PUNP5 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : ins + pi <==> hxan + r1p Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferase genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
product: 752539
kinetic law: 752563
product: 752551
reversible: true
reactant: 752527
fast: false
type: Reaction

540976
name: nucleoside-diphosphate kinase (ATP:dGDP)
reversible: true
reactant: 747028
reactant: 747016
type: Reaction
kinetic law: 747064
fast: false
notes: Abbreviation: R_NDPK5 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dgdp <==> adp + dgtp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
product: 747052
product: 747040

539958
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Sodium_Na
type: Species

542280
value: 0.0
type: LocalParameter

542808
value: 0.0
type: LocalParameter

542964
value: 0.0
type: LocalParameter

734158
stoichiometry: 0.428
species: 539932
type: SpeciesReference

731403
stoichiometry: 1.0
species: 540038
type: SpeciesReference

731259
stoichiometry: 1.0
species: 539924
type: SpeciesReference

733397
stoichiometry: 1.0
species: 539783
type: SpeciesReference

541300
reactant: 754050
kinetic law: 754098
reversible: false
type: Reaction
product: 754074
name: shikimate kinase
notes: Abbreviation: R_SHKK Synonyms: _0 EC Number: 2.7.1.71 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : atp + skm --> adp + h + skm5p Confidence Level: 2 genes: LOCUS:BPLAN_210#ABBREVIATION:aroK#ECNUMBERS:2.7.1.71# proteins: NAME:Skikimic acid kinase I#ABBREVIATION:AroK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_210)
product: 754062
reactant: 754038
fast: false
product: 754086

755859
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543183
value: 0.0
type: LocalParameter

542558
value: 0.0
type: LocalParameter

541867
value: 0.0
type: LocalParameter

543078
value: 0.0
type: LocalParameter

745695
stoichiometry: 1.0
species: 539950
type: SpeciesReference

751947
stoichiometry: 1.0
species: 539783
type: SpeciesReference

730594
stoichiometry: 1.0
species: 539783
type: SpeciesReference

748331
stoichiometry: 1.0
species: 540021
type: SpeciesReference

757069
stoichiometry: 1.0
species: 540117
type: SpeciesReference

750118
stoichiometry: 1.0
species: 539480
type: SpeciesReference

540370
type: Reaction
reactant: 734471
reactant: 734484
product: 734496
reversible: false
product: 734508
notes: Abbreviation: R_BPNT Synonyms: _0 EC Number: 3.1.3.7 SUBSYSTEM: Cysteine Metabolism Equation: [c] : h2o + pap --> amp + pi Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
name: _3',5'-bisphosphate nucleotidase
kinetic law: 734520
fast: false

746059
stoichiometry: 1.0
species: 539964
type: SpeciesReference

542618
value: 0.0
type: LocalParameter

733167
stoichiometry: 1.0
species: 539643
type: SpeciesReference

735490
stoichiometry: 1.0
species: 540013
type: SpeciesReference

540088
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Threonine_C4H9NO3
type: Species

542281
value: 999999.0
type: LocalParameter

737887
stoichiometry: 1.0
species: 540013
type: SpeciesReference

540904
name: malate dehydrogenase
product: 745333
reversible: true
reactant: 745297
type: Reaction
fast: false
kinetic law: 745357
notes: Abbreviation: R_MDH Synonyms: _0 EC Number: 1.1.1.37 SUBSYSTEM: Citric Acid Cycle Equation: [c] : mal-L + nad <==> h + nadh + oaa Confidence Level: 2 genes: LOCUS:BPLAN_024#ABBREVIATION:mdh#ECNUMBERS:1.1.1.37# proteins: NAME:malate dehydrogenase#ABBREVIATION:Mdh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_024)
reactant: 745309
product: 745345
product: 745321

539959
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Sodium_Na
type: Species

541015
product: 747812
product: 747824
reactant: 747800
notes: Abbreviation: R_NTD3 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dcmp + h2o --> dcyt + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
type: Reaction
reactant: 747788
kinetic law: 747836
reversible: false
fast: false
name: _5'-nucleotidase (dCMP)

543860
value: 999999.0
type: LocalParameter

541168
reactant: 751186
reversible: false
reactant: 751174
type: Reaction
name: phosphoribosylglycinamide synthase
reactant: 751162
product: 751210
notes: Abbreviation: R_PRAGSr Synonyms: _1 EC Number: 6.3.4.13 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : atp + gly + pram --> adp + gar + h + pi Confidence Level: 2 JLR- added reversible form of PRAGS genes: LOCUS:BPLAN_160#ABBREVIATION:purD#ECNUMBERS:6.3.4.13# proteins: NAME:Phosphoribosylglycinamide synthetase#ABBREVIATION:PurD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_160)
product: 751198
fast: false
product: 751222
kinetic law: 751246
product: 751234

542557
value: 999999.0
type: LocalParameter

543104
value: 999999.0
type: LocalParameter

756200
stoichiometry: 1.0
species: 540013
type: SpeciesReference

731331
stoichiometry: 1.0
species: 539796
type: SpeciesReference

543764
value: 0.0
type: LocalParameter

745055
stoichiometry: 1.0
species: 539932
type: SpeciesReference

755907
stoichiometry: 1.0
species: 540097
type: SpeciesReference

740997
stoichiometry: 1.0
species: 539941
type: SpeciesReference

542617
value: 999999.0
type: LocalParameter

540550
kinetic law: 738799
product: 738787
reactant: 738775
notes: Abbreviation: R_EX_akg_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : akg <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: _2-Oxoglutarate exchange
type: Reaction

539956
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Myristoyl-ACP (n-C14:0ACP)_C25H47N2O8PRS
type: Species

540087
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Threonine_C4H9NO3
type: Species

543185
value: 0.0
type: LocalParameter

752238
stoichiometry: 1.0
species: 539717
type: SpeciesReference

733856
stoichiometry: 1.0
species: 539659
type: SpeciesReference

737939
stoichiometry: 1.0
species: 539773
type: SpeciesReference

743037
stoichiometry: 1.0
species: 539790
type: SpeciesReference

540086
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Thiamine diphosphate_C12H16N4O7P2S
type: Species

540907
product: 745405
type: Reaction
product: 745393
name: malic enzyme (NADP)
reactant: 745381
kinetic law: 745429
notes: Abbreviation: R_ME2 Synonyms: _6 EC Number: 1.1.1.40 SUBSYSTEM: Anaplerotic reactions Equation: [c] : mal-L + nadp --> co2 + nadph + pyr Confidence Level: 2 genes: LOCUS:BPLAN_230#ABBREVIATION:maeB# proteins: NAME:Malic enzyme (NADP)#ABBREVIATION:Mae# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_230)
fast: false
reactant: 745369
product: 745417
reversible: false

743147
stoichiometry: 4.0
species: 540017
type: SpeciesReference

752094
stoichiometry: 1.0
species: 540013
type: SpeciesReference

542283
value: 0.0
type: LocalParameter

542769
value: 0.0
type: LocalParameter

543650
value: 999999.0
type: LocalParameter

542965
value: -999999.0
type: LocalParameter

542807
value: 999999.0
type: LocalParameter

734653
stoichiometry: 1.0
species: 539605
type: SpeciesReference

543186
value: 0.0
type: LocalParameter

748065
stoichiometry: 1.0
species: 540013
type: SpeciesReference

738967
stoichiometry: 1.0
species: 540136
type: SpeciesReference

542555
value: 0.0
type: LocalParameter

541868
value: 0.0
type: LocalParameter

543074
value: 0.0
type: LocalParameter

539651
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Asparagine_C4H8N2O3
type: Species

542401
value: 999999.0
type: LocalParameter

734001
stoichiometry: 0.087
species: 539682
type: SpeciesReference

738508
stoichiometry: 1.0
species: 540021
type: SpeciesReference

540373
product: 734629
reversible: false
fast: false
product: 734617
reactant: 734568
notes: Abbreviation: R_C120SN Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : actACP + (14) h + (4) malACP + (10) nadph --> (4) ACP + (4) co2 + ddcaACP + (5) h2o + (10) nadp Confidence Level: 2 TV, JRNeidhard pg. 615 genes: LOCUS:BPLAN_596#ABBREVIATION:fabZ#ECNUMBERS:4.2.1.-# LOCUS:BPLAN_294#ABBREVIATION:fabI#ECNUMBERS:1.3.1.9# LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# NAME:Enoyl-(acyl-carrier-protein) reductase (NADH)#ABBREVIATION:FabI# NAME:(3R)-hydroxymyriostoyl-(acyl carrier protein) dehydratase#ABBREVIATION:FabZ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596) and (BPLAN_555) and (BPLAN_294) and (BPLAN_576)
reactant: 734532
reactant: 734556
product: 734592
product: 734580
name: Fatty acid biosynthesis (n-C12:0)
kinetic law: 734641
reactant: 734544
type: Reaction
product: 734604

541684
value: 0.0
type: LocalParameter

542615
value: -999999.0
type: LocalParameter

744642
stoichiometry: 1.0
species: 539673
type: SpeciesReference

751294
stoichiometry: 1.0
species: 539659
type: SpeciesReference

746167
stoichiometry: 1.0
species: 539964
type: SpeciesReference

751354
stoichiometry: 1.0
species: 540013
type: SpeciesReference

542179
value: 999999.0
type: LocalParameter

542302
value: 0.0
type: LocalParameter

752599
stoichiometry: 1.0
species: 539508
type: SpeciesReference

747292
stoichiometry: 1.0
species: 539927
type: SpeciesReference

542400
value: 0.0
type: LocalParameter

540406
kinetic law: 735600
product: 735588
reactant: 735575
notes: Abbreviation: R_CO2t Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: co2[e] <==> co2[c] Confidence Level: 1 tv renamed from CO2TPr to CO2t NCD genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: CO2 transporter via diffusion
type: Reaction

542967
value: 999999.0
type: LocalParameter

543188
value: 999999.0
type: LocalParameter

539955
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Menaquinone 8_C51H72O2
type: Species

541862
value: 0.0
type: LocalParameter

740297
stoichiometry: 1.0
species: 540095
type: SpeciesReference

731103
stoichiometry: 1.0
species: 539677
type: SpeciesReference

541685
value: 999999.0
type: LocalParameter

542614
value: 0.0
type: LocalParameter

542301
value: 0.0
type: LocalParameter

543652
value: 0.0
type: LocalParameter

543109
value: 0.0
type: LocalParameter

744303
stoichiometry: 1.0
species: 539779
type: SpeciesReference

748222
stoichiometry: 1.0
species: 539779
type: SpeciesReference

757286
stoichiometry: 1.0
species: 539659
type: SpeciesReference

751838
stoichiometry: 1.0
species: 539638
type: SpeciesReference

754014
stoichiometry: 1.0
species: 540065
type: SpeciesReference

541012
type: Reaction
reactant: 747728
reactant: 747740
name: _5'-nucleotidase (UMP)
product: 747764
fast: false
kinetic law: 747776
reversible: false
notes: Abbreviation: R_NTD2 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : h2o + ump --> pi + uri Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 747752

749370
stoichiometry: 1.0
species: 539993
type: SpeciesReference

543076
value: 999999.0
type: LocalParameter

749707
stoichiometry: 1.0
species: 539966
type: SpeciesReference

541712
value: 0.0
type: LocalParameter

540409
name: Cytosine deaminase
reactant: 735612
reactant: 735625
reversible: false
fast: false
kinetic law: 735673
type: Reaction
notes: Abbreviation: R_CSND Synonyms: _0 EC Number: 3.5.4.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : csn + h + h2o --> nh4 + ura Confidence Level: 2 JLR genes: LOCUS:BPLAN_287#ABBREVIATION:codA#ECNUMBERS:3.5.4.1# proteins: NAME:cytosine deaminase#ABBREVIATION:CodA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_287)
product: 735649
reactant: 735637
product: 735661

543760
value: 0.0
type: LocalParameter

733300
stoichiometry: 1.0
species: 539643
type: SpeciesReference

731488
stoichiometry: 1.0
species: 539638
type: SpeciesReference

541651
value: 0.0
type: LocalParameter

542391
value: 0.0
type: LocalParameter

540901
reactant: 745249
type: Reaction
reversible: false
fast: false
product: 745261
notes: Abbreviation: R_MCOATA Synonyms: _2 EC Number: 2.3.1.39 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : ACP + malcoa --> coa + malACP Confidence Level: 2 tv genes: LOCUS:BPLAN_103#ABBREVIATION:fabD#ECNUMBERS:2.3.1.39# proteins: NAME:Malonyl coenzyme A-acyl carrier protein transacylase#ABBREVIATION:FabD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_103)
kinetic law: 745285
reactant: 745237
name: Malonyl-CoA-ACP transacylase
product: 745273

746627
stoichiometry: 1.0
species: 539961
type: SpeciesReference

541865
value: 999999.0
type: LocalParameter

732865
stoichiometry: 1.0
species: 540031
type: SpeciesReference

741775
stoichiometry: 1.0
species: 539622
type: SpeciesReference

542304
value: -999999.0
type: LocalParameter

543655
value: 0.0
type: LocalParameter

539952
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5,10-Methylenetetrahydrofolate_C20H21N7O6
type: Species

539718
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dTDP_C10H13N2O11P2
type: Species

543108
value: 0.0
type: LocalParameter

542969
value: 0.0
type: LocalParameter

542612
value: 0.0
type: LocalParameter

731609
stoichiometry: 1.0
species: 539927
type: SpeciesReference

540376
reactant: 734666
reactant: 734690
product: 734727
fast: false
name: Fatty acid biosynthesis (n-C14:0)
type: Reaction
reversible: false
reactant: 734678
product: 734702
product: 734751
reactant: 734653
kinetic law: 734763
product: 734715
notes: Abbreviation: R_C140SN Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : actACP + (17) h + (5) malACP + (12) nadph --> (5) ACP + (5) co2 + (6) h2o + myrsACP + (12) nadp Confidence Level: 2 tvNeidhardt genes: LOCUS:BPLAN_596#ABBREVIATION:fabZ#ECNUMBERS:4.2.1.-# LOCUS:BPLAN_294#ABBREVIATION:fabI#ECNUMBERS:1.3.1.9# LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# NAME:Enoyl-(acyl-carrier-protein) reductase (NADH)#ABBREVIATION:FabI# NAME:(3R)-hydroxymyriostoyl-(acyl carrier protein) dehydratase#ABBREVIATION:FabZ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596) and (BPLAN_555) and (BPLAN_294) and (BPLAN_576)
product: 734739

541864
value: 0.0
type: LocalParameter

749442
stoichiometry: 1.0
species: 539673
type: SpeciesReference

541687
value: 0.0
type: LocalParameter

542392
value: 0.0
type: LocalParameter

541711
value: 0.0
type: LocalParameter

734544
stoichiometry: 14.0
species: 539783
type: SpeciesReference

745237
stoichiometry: 1.0
species: 539601
type: SpeciesReference

747426
stoichiometry: 1.0
species: 539659
type: SpeciesReference

539953
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Menaquinol 8_C51H74O2
type: Species

543654
value: 0.0
type: LocalParameter

539719
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dTMP_C10H13N2O8P
type: Species

542481
value: 0.0
type: LocalParameter

746918
stoichiometry: 1.0
species: 539611
type: SpeciesReference

747932
stoichiometry: 1.0
species: 540013
type: SpeciesReference

539655
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Aspartate_C4H6NO4
type: Species

542611
value: 999999.0
type: LocalParameter

754158
stoichiometry: 1.0
species: 540076
type: SpeciesReference

736991
stoichiometry: 1.0
species: 539699
type: SpeciesReference

541714
value: 0.0
type: LocalParameter

540403
reactant: 735514
fast: false
product: 735551
reactant: 735527
reversible: false
notes: Abbreviation: R_CMPN Synonyms: _0 EC Number: 3.2.2.10 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : cmp + h2o --> csn + r5p Confidence Level: 1 JLR - also acts on dUMP, dCMP,dTMP, and presumably TMP and UMP genes: none proteins: none citations: none GENE ASSOCIATION:
product: 735539
kinetic law: 735563
type: Reaction
name: CMP nucleosidase

541921
value: 0.0
type: LocalParameter

731030
stoichiometry: 1.0
species: 539599
type: SpeciesReference

754474
stoichiometry: 1.0
species: 539747
type: SpeciesReference

753699
stoichiometry: 1.0
species: 539572
type: SpeciesReference

539716
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Deamino-NAD+_C21H24N6O15P2
type: Species

539950
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (R)-mevalonate_C6H11O4
type: Species

732562
stoichiometry: 1.0
species: 539628
type: SpeciesReference

737583
stoichiometry: 1.0
species: 539955
type: SpeciesReference

745877
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543657
value: 999999.0
type: LocalParameter

740201
stoichiometry: 1.0
species: 540195
type: SpeciesReference

748926
stoichiometry: 1.0
species: 539977
type: SpeciesReference

734872
stoichiometry: 1.0
species: 540081
type: SpeciesReference

542394
value: 0.0
type: LocalParameter

543071
value: 0.0
type: LocalParameter

737715
stoichiometry: 1.0
species: 539970
type: SpeciesReference

541459
value: 0.0
type: LocalParameter

744159
stoichiometry: 1.0
species: 539966
type: SpeciesReference

541922
value: -999999.0
type: LocalParameter

744231
stoichiometry: 1.0
species: 539510
type: SpeciesReference

539717
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dephospho-CoA_C21H33N7O13P2S
type: Species

541681
value: 0.0
type: LocalParameter

542395
value: 999999.0
type: LocalParameter

753504
stoichiometry: 1.0
species: 540047
type: SpeciesReference

541861
value: 0.0
type: LocalParameter

541682
value: 0.0
type: LocalParameter

753468
stoichiometry: 1.0
species: 540127
type: SpeciesReference

540379
reactant: 734775
product: 734860
product: 734872
reactant: 734787
product: 734823
notes: Abbreviation: R_C141SN Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : actACP + (16) h + (5) malACP + (11) nadph --> (5) ACP + (5) co2 + (6) h2o + (11) nadp + tdeACP Confidence Level: 2 tv genes: LOCUS:BPLAN_596#ABBREVIATION:fabZ#ECNUMBERS:4.2.1.-# LOCUS:none#ABBREVIATION:fabA#ECNUMBERS:4.2.1.60# LOCUS:BPLAN_294#ABBREVIATION:fabI#ECNUMBERS:1.3.1.9# LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# LOCUS:BPLAN_524#ABBREVIATION:fabH#ECNUMBERS:2.3.1.41# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase#ABBREVIATION:FabH# NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# NAME:Enoyl-(acyl-carrier-protein) reductase (NADH)#ABBREVIATION:FabI# NAME:beta-hydroxydecanoyl thioester dehydrase#ABBREVIATION:FabA# NAME:(3R)-hydroxymyriostoyl-(acyl carrier protein) dehydratase#ABBREVIATION:FabZ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596) and (BPLAN_294) and (BPLAN_576) and (BPLAN_555) or (BPLAN_524)
reactant: 734799
fast: false
name: Fatty acid biosynthesis (n-C14:1)
reactant: 734811
kinetic law: 734884
type: Reaction
product: 734835
reversible: false
product: 734848

742660
stoichiometry: 1.0
species: 540021
type: SpeciesReference

539653
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Aspartate_C4H6NO4
type: Species

540970
product: 746930
notes: Abbreviation: R_NDPK3 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + cdp <==> adp + ctp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
type: Reaction
reactant: 746905
reversible: true
product: 746918
fast: false
reactant: 746893
name: nucleoside-diphosphate kinase (ATP:CDP)
kinetic law: 746942

745477
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type: SpeciesReference

756140
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species: 539601
type: SpeciesReference

543659
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735747
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species: 539681
type: SpeciesReference

539714
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _6,7-Dimethyl-8-(1-D-ribityl)lumazine_C13H18N4O6
type: Species

734206
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species: 539966
type: SpeciesReference

731199
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species: 539783
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750191
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species: 539784
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734085
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species: 539760
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541715
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755403
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species: 539722
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543073
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species: 539779
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dimethylallyl diphosphate_C5H9O7P2
type: Species

734218
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species: 539967
type: SpeciesReference

753240
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species: 539754
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744243
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741299
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743600
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type: SpeciesReference

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732452
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species: 539783
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542786
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541541
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541796
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type: LocalParameter

539977
constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O2_O2
type: Species

539770
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: Glycolate_C2H3O3
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542834
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species: 540161
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value: 999999.0
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539667
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: chorismate_C10H8O6
type: Species

544088
value: 0.0
type: LocalParameter

539771
constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Glycolate_C2H3O3
type: Species

542457
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541702
value: 0.0
type: LocalParameter

541542
value: 999999.0
type: LocalParameter

730946
stoichiometry: 1.0
species: 539677
type: SpeciesReference

542835
value: 0.0
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543939
value: 0.0
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541795
value: 0.0
type: LocalParameter

747884
stoichiometry: 1.0
species: 540013
type: SpeciesReference

737824
stoichiometry: 1.0
species: 539530
type: SpeciesReference

543026
value: -999999.0
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743389
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species: 540010
type: SpeciesReference

748246
stoichiometry: 1.0
species: 539783
type: SpeciesReference

541703
value: 999999.0
type: LocalParameter

745501
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species: 539945
type: SpeciesReference

742078
stoichiometry: 1.0
species: 540083
type: SpeciesReference

539772
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: GMP_C10H12N5O8P
type: Species

542454
value: 0.0
type: LocalParameter

754523
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species: 539731
type: SpeciesReference

756030
stoichiometry: 1.0
species: 539659
type: SpeciesReference

540556
kinetic law: 738871
product: 738859
reactant: 738847
notes: Abbreviation: R_EX_arg_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : arg-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Arginine exchange
type: Reaction

543531
value: 999999.0
type: LocalParameter

751850
stoichiometry: 1.0
species: 539783
type: SpeciesReference

731187
stoichiometry: 1.0
species: 539584
type: SpeciesReference

542560
value: 0.0
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757165
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species: 539722
type: SpeciesReference

733699
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544086
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543820
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type: LocalParameter

732998
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species: 539566
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735575
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species: 539675
type: SpeciesReference

539773
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Geranyl diphosphate_C10H17O7P2
type: Species

542787
value: 0.0
type: LocalParameter

745369
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species: 539941
type: SpeciesReference

542455
value: 999999.0
type: LocalParameter

539665
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: CDPdiacylglycerol (Blattabacterium Periplaneta americana)_C2286H3998N150O750P100
type: Species

541793
value: 999999.0
type: LocalParameter

542724
value: 0.0
type: LocalParameter

542837
value: 999999.0
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745129
stoichiometry: 1.0
species: 539783
type: SpeciesReference

541540
value: 0.0
type: LocalParameter

734932
stoichiometry: 14.0
species: 539969
type: SpeciesReference

543538
value: 999999.0
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743721
stoichiometry: 1.0
species: 539783
type: SpeciesReference

742223
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species: 539769
type: SpeciesReference

756900
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species: 539584
type: SpeciesReference

739898
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species: 539980
type: SpeciesReference

753360
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species: 540092
type: SpeciesReference

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stoichiometry: 1.0
species: 539783
type: SpeciesReference

539973
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Nicotinate D-ribonucleotide_C11H12NO9P
type: Species

542838
value: 0.0
type: LocalParameter

731307
stoichiometry: 1.0
species: 539783
type: SpeciesReference

541792
value: 0.0
type: LocalParameter

735783
stoichiometry: 1.0
species: 540013
type: SpeciesReference

539774
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Guanosine_C10H13N5O5
type: Species

543823
value: 0.0
type: LocalParameter

730521
stoichiometry: 1.0
species: 540013
type: SpeciesReference

542781
value: 0.0
type: LocalParameter

756670
stoichiometry: 1.0
species: 539783
type: SpeciesReference

735625
stoichiometry: 1.0
species: 539783
type: SpeciesReference

746131
stoichiometry: 1.0
species: 539955
type: SpeciesReference

539972
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Ammonium_H4N
type: Species

734326
stoichiometry: 5.0E-5
species: 540083
type: SpeciesReference

543935
value: -999999.0
type: LocalParameter

540553
kinetic law: 738835
product: 738823
reactant: 738811
notes: Abbreviation: R_EX_ala_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : ala-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Alanine exchange
type: Reaction

539550
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-Methyl-2-oxopentanoate_C6H9O3
type: Species

542371
value: 999999.0
type: LocalParameter

754800
stoichiometry: 1.0
species: 540085
type: SpeciesReference

539663
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: CDP_C9H12N3O11P2
type: Species

736880
stoichiometry: 1.0
species: 539970
type: SpeciesReference

543822
value: 0.0
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741214
stoichiometry: 1.0
species: 539758
type: SpeciesReference

542671
value: 999999.0
type: LocalParameter

752866
stoichiometry: 1.0
species: 540036
type: SpeciesReference

748756
stoichiometry: 1.0
species: 540021
type: SpeciesReference

541790
value: 0.0
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543536
value: 0.0
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756078
stoichiometry: 1.0
species: 540013
type: SpeciesReference

733337
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species: 539653
type: SpeciesReference

748804
stoichiometry: 1.0
species: 539779
type: SpeciesReference

745852
stoichiometry: 1.0
species: 539969
type: SpeciesReference

542370
value: -999999.0
type: LocalParameter

543825
value: 999999.0
type: LocalParameter

542458
value: 0.0
type: LocalParameter

539776
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: GTP_C10H12N5O14P3
type: Species

542784
value: 0.0
type: LocalParameter

741883
stoichiometry: 1.0
species: 540021
type: SpeciesReference

744014
stoichiometry: 1.0
species: 539964
type: SpeciesReference

539974
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: NMN_C11H14N2O8P
type: Species

746312
stoichiometry: 1.0
species: 539506
type: SpeciesReference

749538
stoichiometry: 1.0
species: 539767
type: SpeciesReference

747378
stoichiometry: 1.0
species: 539974
type: SpeciesReference

543535
value: 0.0
type: LocalParameter

742793
stoichiometry: 1.0
species: 539781
type: SpeciesReference

732877
stoichiometry: 1.0
species: 540021
type: SpeciesReference

543937
value: 999999.0
type: LocalParameter

541327
product: 754680
type: Reaction
fast: false
reactant: 754644
name: transaldolase
product: 754668
kinetic law: 754692
notes: Abbreviation: R_TALA Synonyms: _0 EC Number: 2.2.1.2 SUBSYSTEM: Pentose Phosphate Pathway Equation: [c] : g3p + s7p <==> e4p + f6p Confidence Level: 2 SMP genes: LOCUS:BPLAN_422#ABBREVIATION:tal#ECNUMBERS:2.2.1.2# proteins: NAME:transaldolase#ABBREVIATION:Tal# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_422)
reversible: true
reactant: 754656

541700
value: 0.0
type: LocalParameter

542783
value: 999999.0
type: LocalParameter

539777
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Guanine_C5H5N5O
type: Species

753760
stoichiometry: 1.0
species: 539677
type: SpeciesReference

755626
stoichiometry: 1.0
species: 539783
type: SpeciesReference

541078
notes: Abbreviation: R_OMBZLM Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 2ombzl + amet --> 2ommbl + ahcys + h Confidence Level: 2 JLR genes: LOCUS:BPLAN_525#ABBREVIATION:ubiE#ECNUMBERS:2.1.1.-# proteins: NAME:_2-DMK methyltransferase and 2-octaprenyl-6-methoxy-1,4-benzoquinonol methylase#ABBREVIATION:UbiE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_525)
type: Reaction
name: _2-Octaprenyl-6-methoxy-benzoquinol methylase
reactant: 749165
reversible: false
product: 749189
fast: false
kinetic law: 749213
product: 749177
reactant: 749153
product: 749201

539661
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Carbamoyl phosphate_CH2NO5P
type: Species

748161
stoichiometry: 1.0
species: 539779
type: SpeciesReference

542720
value: -999999.0
type: LocalParameter

540628
kinetic law: 739740
product: 739728
reactant: 739716
notes: Abbreviation: R_EX_mal_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : mal-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Malate exchange
type: Reaction

542569
value: 999999.0
type: LocalParameter

543932
value: 0.0
type: LocalParameter

754896
stoichiometry: 1.0
species: 540088
type: SpeciesReference

543827
value: 0.0
type: LocalParameter

542729
value: 999999.0
type: LocalParameter

742941
stoichiometry: 1.0
species: 539783
type: SpeciesReference

751642
stoichiometry: 1.0
species: 539611
type: SpeciesReference

757057
stoichiometry: 1.0
species: 539779
type: SpeciesReference

737400
stoichiometry: 1.0
species: 539704
type: SpeciesReference

734580
stoichiometry: 4.0
species: 539601
type: SpeciesReference

541189
kinetic law: 751740
product: 751728
reactant: 751715
notes: Abbreviation: R_PRMICIi Synonyms: _0 EC Number: 5.3.1.16 SUBSYSTEM: Histidine Metabolism Equation: [c] : prfp --> prlp Confidence Level: 2 JLR - added irreversible form of PRMICI genes: LOCUS:BPLAN_202#ABBREVIATION:hisA#ECNUMBERS:5.3.1.16# proteins: NAME:Phosphoribosylformimino-5-amino-1-phosphoribosyl-4-imidazole carboxamide#ABBREVIATION:HisA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_202)
fast: false
reversible: false
name: _1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (irreversible)
type: Reaction

539554
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-Phospho-D-erythronate_C4H6O8P
type: Species

542672
value: 0.0
type: LocalParameter

541216
notes: Abbreviation: R_PUNP1 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : adn + pi <==> ade + r1p Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferase genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
product: 752298
fast: false
reactant: 752286
type: Reaction
product: 752310
name: purine-nucleoside phosphorylase (Adenosine)
reversible: true
kinetic law: 752322
reactant: 752274

740465
stoichiometry: 1.0
species: 539749
type: SpeciesReference

542142
value: 0.0
type: LocalParameter

732031
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540331
product: 733131
reactant: 733095
name: L-arginine transport via ABC system
product: 733119
reactant: 733083
product: 733107
type: Reaction
reactant: 733071
reversible: false
kinetic law: 733155
notes: Abbreviation: R_ARGabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: arg-L[e] + atp[c] + h2o[c] --> adp[c] + arg-L[c] + h[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 733143
fast: false

756188
stoichiometry: 1.0
species: 540103
type: SpeciesReference

737978
stoichiometry: 1.0
species: 539710
type: SpeciesReference

543750
value: 0.0
type: LocalParameter

734435
stoichiometry: 45.5628
species: 540013
type: SpeciesReference

751910
stoichiometry: 1.0
species: 539544
type: SpeciesReference

543244
value: 999999.0
type: LocalParameter

743831
stoichiometry: 1.0
species: 539783
type: SpeciesReference

750338
stoichiometry: 3.0
species: 539958
type: SpeciesReference

542675
value: 0.0
type: LocalParameter

748053
stoichiometry: 1.0
species: 539609
type: SpeciesReference

731983
stoichiometry: 1.0
species: 539593
type: SpeciesReference

542567
value: -999999.0
type: LocalParameter

543829
value: 0.0
type: LocalParameter

743025
stoichiometry: 3.0
species: 539783
type: SpeciesReference

541219
product: 752370
name: purine-nucleoside phosphorylase (Deoxyadenosine)
reactant: 752334
fast: false
type: Reaction
notes: Abbreviation: R_PUNP2 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dad-2 + pi <==> 2dr1p + ade Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferase genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
product: 752358
kinetic law: 752382
reversible: true
reactant: 752346

542898
value: 0.0
type: LocalParameter

543934
value: 0.0
type: LocalParameter

747220
stoichiometry: 1.0
species: 539611
type: SpeciesReference

752975
stoichiometry: 1.0
species: 539659
type: SpeciesReference

739281
stoichiometry: 1.0
species: 539763
type: SpeciesReference

544018
value: 0.0
type: LocalParameter

744618
stoichiometry: 1.0
species: 539939
type: SpeciesReference

542780
value: 0.0
type: LocalParameter

539552
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-Phospho-L-aspartate_C4H6NO7P
type: Species

754389
stoichiometry: 1.0
species: 540077
type: SpeciesReference

542674
value: 0.0
type: LocalParameter

730886
stoichiometry: 1.0
species: 539673
type: SpeciesReference

749297
stoichiometry: 1.0
species: 539993
type: SpeciesReference

540841
product: 743855
product: 743843
reversible: false
name: L-isoleucine transport via ABC system
product: 743819
notes: Abbreviation: R_ILEabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + ile-L[e] --> adp[c] + h[c] + ile-L[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 743868
product: 743831
reactant: 743806
reactant: 743794
reactant: 743782
fast: false
type: Reaction

542140
value: 0.0
type: LocalParameter

730729
stoichiometry: 1.0
species: 539597
type: SpeciesReference

754050
stoichiometry: 1.0
species: 540065
type: SpeciesReference

734715
stoichiometry: 5.0
species: 539673
type: SpeciesReference

756212
stoichiometry: 1.0
species: 540102
type: SpeciesReference

543752
value: 0.0
type: LocalParameter

737498
stoichiometry: 1.0
species: 540021
type: SpeciesReference

741106
stoichiometry: 1.0
species: 539595
type: SpeciesReference

739692
stoichiometry: 1.0
species: 540159
type: SpeciesReference

543246
value: 0.0
type: LocalParameter

754243
stoichiometry: 1.0
species: 539659
type: SpeciesReference

544019
value: 0.0
type: LocalParameter

541432
name: urease
reactant: 757069
reactant: 757045
product: 757093
type: Reaction
product: 757081
notes: Abbreviation: R_UREA Synonyms: _0 EC Number: 3.5.1.5 Equation: [c] : (2) h + h2o + urea --> co2 + (2) nh4 Confidence Level: 4 genes: LOCUS:BPLAN_137#ABBREVIATION:ureAB#ECNUMBERS:3.5.1.5# LOCUS:BPLAN_136#ABBREVIATION:ureC#ECNUMBERS:3.5.1.5# proteins: NAME:Urease, alpha subunit#ABBREVIATION:UreC# NAME:Urease beta gamma subunit#ABBREVIATION:UreAB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_137) and (BPLAN_136)
kinetic law: 757105
reversible: false
reactant: 757057
fast: false

541810
value: 0.0
type: LocalParameter

745019
stoichiometry: 1.0
species: 539550
type: SpeciesReference

740020
stoichiometry: 1.0
species: 540180
type: SpeciesReference

542452
value: 0.0
type: LocalParameter

542677
value: 999999.0
type: LocalParameter

733541
stoichiometry: 1.0
species: 539649
type: SpeciesReference

731537
stoichiometry: 1.0
species: 539638
type: SpeciesReference

733409
stoichiometry: 1.0
species: 540021
type: SpeciesReference

543249
value: 0.0
type: LocalParameter

756321
stoichiometry: 1.0
species: 540104
type: SpeciesReference

543753
value: 0.0
type: LocalParameter

734799
stoichiometry: 5.0
species: 539939
type: SpeciesReference

750835
stoichiometry: 1.0
species: 540005
type: SpeciesReference

747644
stoichiometry: 1.0
species: 540126
type: SpeciesReference

740973
stoichiometry: 1.0
species: 539747
type: SpeciesReference

542726
value: 0.0
type: LocalParameter

541936
value: 0.0
type: LocalParameter

539558
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-((R)-4-Phosphopantothenoyl)-L-cysteine_C12H20N2O9PS
type: Species

542831
value: 999999.0
type: LocalParameter

541811
value: 999999.0
type: LocalParameter

542566
value: 0.0
type: LocalParameter

543248
value: 0.0
type: LocalParameter

736350
stoichiometry: 1.0
species: 539694
type: SpeciesReference

542727
value: 0.0
type: LocalParameter

543930
value: 999999.0
type: LocalParameter

747908
stoichiometry: 1.0
species: 539719
type: SpeciesReference

752154
stoichiometry: 1.0
species: 539671
type: SpeciesReference

743685
stoichiometry: 1.0
species: 539919
type: SpeciesReference

542563
value: 999999.0
type: LocalParameter

542832
value: 0.0
type: LocalParameter

540844
kinetic law: 743929
reversible: true
product: 743916
reactant: 743892
notes: Abbreviation: R_ILETA Synonyms: _0 EC Number: 2.6.1.42 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : akg + ile-L <==> 3mop + glu-L Confidence Level: 2 genes: LOCUS:BPLAN_185#ABBREVIATION:ilvE#ECNUMBERS:2.6.1.42,-!-,2.6.1.2# proteins: NAME:Branched-chain-amino-acid aminotransferase#ABBREVIATION:IlvE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_185)
fast: false
type: Reaction
reactant: 743880
name: isoleucine transaminase
product: 743904

541937
value: 0.0
type: LocalParameter

738231
stoichiometry: 1.0
species: 539926
type: SpeciesReference

738183
stoichiometry: 1.0
species: 539570
type: SpeciesReference

735843
stoichiometry: 1.0
species: 539611
type: SpeciesReference

543755
value: 999999.0
type: LocalParameter

738303
stoichiometry: 1.0
species: 539718
type: SpeciesReference

731295
stoichiometry: 1.0
species: 539607
type: SpeciesReference

745925
stoichiometry: 1.0
species: 539964
type: SpeciesReference

741700
stoichiometry: 1.0
species: 539783
type: SpeciesReference

744558
stoichiometry: 1.0
species: 539605
type: SpeciesReference

733288
stoichiometry: 1.0
species: 539647
type: SpeciesReference

541108
reactant: 749913
notes: Abbreviation: R_PERD Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 4per + nad <==> h + nadh + ohpb Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
product: 749961
type: Reaction
fast: false
product: 749937
product: 749949
name: Erythronate 4-phosphate (4per) dehydrogenase
reactant: 749925
reversible: true
kinetic law: 749973

540559
kinetic law: 738907
product: 738895
reactant: 738883
notes: Abbreviation: R_EX_asn_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : asn-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Asparagine exchange
type: Reaction

541813
value: 0.0
type: LocalParameter

746869
stoichiometry: 1.0
species: 540121
type: SpeciesReference

541938
value: 0.0
type: LocalParameter

542678
value: 0.0
type: LocalParameter

539556
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-4'-Phosphopantothenate_C9H15NO8P
type: Species

542564
value: 0.0
type: LocalParameter

736930
stoichiometry: 1.0
species: 540005
type: SpeciesReference

757310
stoichiometry: 1.0
species: 540123
type: SpeciesReference

748476
stoichiometry: 1.0
species: 540021
type: SpeciesReference

542451
value: 0.0
type: LocalParameter

543746
value: 0.0
type: LocalParameter

540271
kinetic law: 731765
product: 731753
product: 731741
reactant: 731729
notes: Abbreviation: R_ADSL1r Synonyms: _0 EC Number: 4.3.2.2 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : dcamp --> amp + fum Confidence Level: 2 JLR- added reversible form of ADSL1 genes: LOCUS:BPLAN_152#ABBREVIATION:purB#ECNUMBERS:4.3.2.2# proteins: NAME:Adenylosuccinate lyase#ABBREVIATION:PurB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_152)
fast: false
reversible: false
name: adenylsuccinate lyase
type: Reaction

741335
stoichiometry: 1.0
species: 539966
type: SpeciesReference

734073
stoichiometry: 0.25
species: 539756
type: SpeciesReference

541932
value: 0.0
type: LocalParameter

540847
kinetic law: 743978
product: 743965
product: 743953
reactant: 743941
notes: Abbreviation: R_IMPC Synonyms: _0 EC Number: 3.5.4.10 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : fprica --> h2o + imp Confidence Level: 2 genes: LOCUS:BPLAN_159#ABBREVIATION:purH#ECNUMBERS:3.5.4.10,-!-,2.1.2.3# proteins: NAME:AICAR transformylase and IMP cyclohydrolase#ABBREVIATION:PurH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_159)
fast: false
reversible: false
name: IMP cyclohydrolase
type: Reaction

542937
value: 0.0
type: LocalParameter

542668
value: 0.0
type: LocalParameter

755415
stoichiometry: 1.0
species: 539952
type: SpeciesReference

542074
value: 0.0
type: LocalParameter

540910
reactant: 745453
notes: Abbreviation: R_METabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + met-L[e] --> adp[c] + h[c] + met-L[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 745441
product: 745513
type: Reaction
product: 745477
reversible: false
name: L-methionine transport via ABC system
fast: false
kinetic law: 745525
product: 745489
product: 745501
reactant: 745465

738015
stoichiometry: 1.0
species: 540013
type: SpeciesReference

543745
value: 0.0
type: LocalParameter

755981
stoichiometry: 1.0
species: 539521
type: SpeciesReference

542149
value: 999999.0
type: LocalParameter

542223
value: 0.0
type: LocalParameter

739910
stoichiometry: 1.0
species: 540171
type: SpeciesReference

745489
stoichiometry: 1.0
species: 539783
type: SpeciesReference

739317
stoichiometry: 1.0
species: 539766
type: SpeciesReference

540328
product: 733047
reactant: 732998
reversible: false
notes: Abbreviation: R_APRAUR Synonyms: _0 EC Number: 1.1.1.193 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 5apru + h + nadph --> 5aprbu + nadp Confidence Level: 2 genes: LOCUS:BPLAN_491#ABBREVIATION:ribD#ECNUMBERS:3.5.4.26,-!-,1.1.1.193# proteins: NAME:pyrimidine deaminase and pyrimidine reductase#ABBREVIATION:RibD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_491)
product: 733035
fast: false
reactant: 733023
type: Reaction
name: _5-amino-6-(5-phosphoribosylamino)uracil reductase
kinetic law: 733059
reactant: 733010

541814
value: 0.0
type: LocalParameter

541117
product: 750118
notes: Abbreviation: R_PGK Synonyms: _0 EC Number: 2.7.2.3 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : 3pg + atp <==> 13dpg + adp Confidence Level: 2 SMP genes: LOCUS:BPLAN_346#ABBREVIATION:pgk#ECNUMBERS:2.7.2.3# proteins: NAME:phosphoglycerate kinase#ABBREVIATION:Pgk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_346)
kinetic law: 750142
type: Reaction
reversible: true
fast: false
name: phosphoglycerate kinase
product: 750130
reactant: 750094
reactant: 750106

544012
value: 0.0
type: LocalParameter

542938
value: 0.0
type: LocalParameter

540059
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Serine_C3H7NO3
type: Species

542669
value: 0.0
type: LocalParameter

741190
stoichiometry: 1.0
species: 539953
type: SpeciesReference

543452
value: 0.0
type: LocalParameter

541897
value: 0.0
type: LocalParameter

753432
stoichiometry: 1.0
species: 540092
type: SpeciesReference

739064
stoichiometry: 1.0
species: 539736
type: SpeciesReference

752756
stoichiometry: 1.0
species: 540036
type: SpeciesReference

542148
value: -999999.0
type: LocalParameter

744123
stoichiometry: 1.0
species: 539964
type: SpeciesReference

543748
value: 999999.0
type: LocalParameter

747016
stoichiometry: 1.0
species: 539659
type: SpeciesReference

739474
stoichiometry: 1.0
species: 540152
type: SpeciesReference

754461
stoichiometry: 1.0
species: 539732
type: SpeciesReference

539548
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-Hydroxy-L-threonine_C4H9NO4
type: Species

544011
value: 0.0
type: LocalParameter

541817
value: 999999.0
type: LocalParameter

541222
kinetic law: 752443
name: purine-nucleoside phosphorylase (Guanosine)
product: 752419
fast: false
notes: Abbreviation: R_PUNP3 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gsn + pi <==> gua + r1p Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferase genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
reactant: 752406
product: 752431
reactant: 752394
reversible: true
type: Reaction

541934
value: 999999.0
type: LocalParameter

543391
value: 999999.0
type: LocalParameter

542935
value: 0.0
type: LocalParameter

540165
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Nicotinate_C6H4NO2
type: Species

542076
value: 0.0
type: LocalParameter

540325
reversible: false
reactant: 732913
product: 732949
reactant: 732925
notes: Abbreviation: R_ANS Synonyms: _0 EC Number: 4.1.3.27 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : chor + gln-L --> anth + glu-L + h + pyr Confidence Level: 2 genes: LOCUS:BPLAN_219#ABBREVIATION:trpD#ECNUMBERS:4.1.3.27,-!-,2.4.2.18# LOCUS:BPLAN_220#ABBREVIATION:trpE#ECNUMBERS:4.1.3.27# proteins: NAME:Anthranilate synthase I#ABBREVIATION:TrpE# NAME:anthranilate synthase II#ABBREVIATION:TrpD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_220) and (BPLAN_219)
product: 732961
kinetic law: 732986
product: 732937
product: 732973
fast: false
name: anthranilate synthase
type: Reaction

543451
value: 0.0
type: LocalParameter

542220
value: 0.0
type: LocalParameter

734860
stoichiometry: 11.0
species: 539967
type: SpeciesReference

541894
value: 0.0
type: LocalParameter

541423
type: Reaction
name: UDP-3-O-acetylglucosamine deacetylase
kinetic law: 756924
product: 756912
reactant: 756876
reactant: 756888
fast: false
product: 756900
notes: Abbreviation: R_UHGADA Synonyms: _0 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : h2o + u3aga --> ac + u3hga Confidence Level: 2 tc genes: LOCUS:BPLAN_596#ABBREVIATION:lpxC#ECNUMBERS:3.5.1.-# proteins: NAME:UDP-3-O-acyl-N-acetylglucosamine deacetylase#ABBREVIATION:LpxC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596)
reversible: false

542221
value: 999999.0
type: LocalParameter

746384
stoichiometry: 1.0
species: 539966
type: SpeciesReference

543179
value: 0.0
type: LocalParameter

742623
stoichiometry: 1.0
species: 539492
type: SpeciesReference

541180
product: 751498
product: 751462
reactant: 751450
notes: Abbreviation: R_PRASCS Synonyms: _0 EC Number: 6.3.2.6 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : 5aizc + asp-L + atp --> 25aics + adp + h + pi Confidence Level: 2 genes: LOCUS:BPLAN_155#ABBREVIATION:purC#ECNUMBERS:6.3.2.6# proteins: NAME:phosphoribosyaminoimidazole-succinocarboxamide synthetase#ABBREVIATION:PurC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_155)
reactant: 751438
type: Reaction
reversible: false
reactant: 751426
product: 751486
kinetic law: 751510
name: phosphoribosylaminoimidazolesuccinocarboxamide synthase
fast: false
product: 751474

541816
value: 0.0
type: LocalParameter

731753
stoichiometry: 1.0
species: 539747
type: SpeciesReference

541933
value: -999999.0
type: LocalParameter

540439
product: 736434
fast: false
kinetic law: 736458
reactant: 736410
product: 736446
reactant: 736398
type: Reaction
reversible: false
name: Deoxyadenosine deaminase
notes: Abbreviation: R_DADA Synonyms: _0 EC Number: 3.5.4.4 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dad-2 + h + h2o --> din + nh4 Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 736422

749069
stoichiometry: 5.0
species: 540021
type: SpeciesReference

541895
value: 999999.0
type: LocalParameter

540622
kinetic law: 739668
product: 739656
reactant: 739644
notes: Abbreviation: R_EX_leu_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : leu-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Leucine exchange
type: Reaction

542077
value: 999999.0
type: LocalParameter

743243
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543178
value: 0.0
type: LocalParameter

732237
stoichiometry: 1.0
species: 539611
type: SpeciesReference

752419
stoichiometry: 1.0
species: 539777
type: SpeciesReference

542146
value: 0.0
type: LocalParameter

748683
stoichiometry: 1.0
species: 539783
type: SpeciesReference

735211
stoichiometry: 8.0
species: 539779
type: SpeciesReference

747438
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540388
product: 735211
reactant: 735151
reactant: 735139
kinetic law: 735247
product: 735199
product: 735223
reversible: false
name: Fatty acid biosynthesis (n-C18:1)
product: 735235
reactant: 735163
notes: Abbreviation: R_C181SN Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : actACP + (22) h + (7) malACP + (15) nadph --> (7) ACP + (7) co2 + (8) h2o + (15) nadp + octeACP Confidence Level: 2 tv genes: LOCUS:BPLAN_596#ABBREVIATION:fabZ#ECNUMBERS:4.2.1.-# LOCUS:none#ABBREVIATION:fabA#ECNUMBERS:4.2.1.60# LOCUS:BPLAN_294#ABBREVIATION:fabI#ECNUMBERS:1.3.1.9# LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.41# LOCUS:BPLAN_524#ABBREVIATION:fabH#ECNUMBERS:2.3.1.41# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase#ABBREVIATION:FabH# NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# NAME:Enoyl-(acyl-carrier-protein) reductase (NADH)#ABBREVIATION:FabI# NAME:beta-hydroxydecanoyl thioester dehydrase#ABBREVIATION:FabA# NAME:(3R)-hydroxymyriostoyl-(acyl carrier protein) dehydratase#ABBREVIATION:FabZ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596 and BPLAN_555) or (BPLAN_524 and BPLAN_576) and (BPLAN_294)
product: 735187
reactant: 735175
fast: false
type: Reaction

540625
kinetic law: 739704
product: 739692
reactant: 739680
notes: Abbreviation: R_EX_lys_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : lys-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Lysine exchange
type: Reaction

541429
kinetic law: 757033
product: 757021
product: 757009
reactant: 756997
notes: Abbreviation: R_UPP3S Synonyms: _0 EC Number: 4.2.1.75 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : hmbil --> h2o + uppg3 Confidence Level: 2 genes: LOCUS:BPLAN_350#ABBREVIATION:hemD#ECNUMBERS:4.2.1.75# proteins: NAME:Uroporphyrinogen III synthase#ABBREVIATION:HemD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_350)
fast: false
reversible: false
name: uroporphyrinogen-III synthase
type: Reaction

541114
reactant: 750021
notes: Abbreviation: R_PGCD Synonyms: _0 EC Number: 1.1.1.95 SUBSYSTEM: Glycine and Serine Metabolism Equation: [c] : 3pg + nad <==> 3php + h + nadh Confidence Level: 2 genes: LOCUS:BPLAN_357#ABBREVIATION:serA#ECNUMBERS:1.1.1.95# proteins: NAME:Phosphoglycerate dehydrogenase#ABBREVIATION:SerA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_357)
name: phosphoglycerate dehydrogenase
reactant: 750033
product: 750057
kinetic law: 750082
fast: false
type: Reaction
product: 750069
reversible: true
product: 750045

541819
value: 0.0
type: LocalParameter

544016
value: 0.0
type: LocalParameter

541186
fast: false
notes: Abbreviation: R_PRFGS Synonyms: _0 EC Number: 6.3.5.3 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : atp + fgam + gln-L + h2o --> adp + fpram + glu-L + h + pi Confidence Level: 2 genes: LOCUS:BPLAN_153#ABBREVIATION:purL#ECNUMBERS:6.3.5.3# proteins: NAME:Phosphoribosylformylglycineamide synthetase#ABBREVIATION:PurL# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_153)
product: 751666
type: Reaction
product: 751642
reactant: 751630
name: phosphoribosylformylglycinamidine synthase
reversible: false
reactant: 751606
reactant: 751618
product: 751679
kinetic law: 751703
product: 751654
reactant: 751594
product: 751691

542145
value: 0.0
type: LocalParameter

543456
value: 0.0
type: LocalParameter

540160
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Malate_C4H4O5
type: Species

542079
value: 0.0
type: LocalParameter

741787
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540913
notes: Abbreviation: R_METAT Synonyms: _0 EC Number: 2.5.1.6 SUBSYSTEM: Methionine Metabolism Equation: [c] : atp + h2o + met-L --> amet + pi + ppi Confidence Level: 2 genes: LOCUS:BPLAN_295#ABBREVIATION:metK#ECNUMBERS:2.5.1.6# proteins: NAME:methionine adenosyltransferase I#ABBREVIATION:MetK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_295)
reversible: false
reactant: 745537
reactant: 745549
name: methionine adenosyltransferase
reactant: 745561
kinetic law: 745611
type: Reaction
fast: false
product: 745587
product: 745574
product: 745599

540274
kinetic law: 731813
product: 731801
product: 731789
reactant: 731777
notes: Abbreviation: R_ADSL2r Synonyms: _0 EC Number: 4.3.2.2 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : 25aics --> aicar + fum Confidence Level: 2 JLR- added reversible form of ADSL2 genes: LOCUS:BPLAN_152#ABBREVIATION:purB#ECNUMBERS:4.3.2.2# proteins: NAME:Adenylosuccinate lyase#ABBREVIATION:PurB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_152)
fast: false
reversible: false
name: adenylosuccinate lyase
type: Reaction

542290
value: 0.0
type: LocalParameter

753650
stoichiometry: 1.0
species: 539797
type: SpeciesReference

541000
kinetic law: 747536
product: 747524
product: 747512
reactant: 747499
notes: Abbreviation: R_NPHS Synonyms: _0 EC Number: 4.1.3.36 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : sbzcoa --> coa + dhna Confidence Level: 2 genes: LOCUS:BPLAN_369#ABBREVIATION:menB#ECNUMBERS:4.1.3.36# proteins: NAME:Napthoate synthase#ABBREVIATION:MenB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_369)
fast: false
reversible: false
name: naphthoate synthase
type: Reaction

541225
reversible: true
kinetic law: 752503
product: 752491
reactant: 752455
notes: Abbreviation: R_PUNP4 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dgsn + pi <==> 2dr1p + gua Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferase genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
type: Reaction
name: purine-nucleoside phosphorylase (Deoxyguanosine)
reactant: 752467
product: 752479
fast: false

542934
value: 999999.0
type: LocalParameter

543241
value: 0.0
type: LocalParameter

541183
kinetic law: 751582
product: 751546
reactant: 751522
type: Reaction
name: phosphoribosyl-ATP pyrophosphatase
reactant: 751534
product: 751570
product: 751558
fast: false
reversible: false
notes: Abbreviation: R_PRATPP Synonyms: _0 EC Number: 3.6.1.31 SUBSYSTEM: Histidine Metabolism Equation: [c] : h2o + prbatp --> h + ppi + prbamp Confidence Level: 2 genes: LOCUS:BPLAN_200#ABBREVIATION:hisI#ECNUMBERS:3.5.4.19,-!-,3.6.1.31# proteins: NAME:Phosphoribosyl-ATP pyrophosphatase and -AMP cyclohydrolase#ABBREVIATION:HisI# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_200)

543300
value: 999999.0
type: LocalParameter

750991
stoichiometry: 1.0
species: 539673
type: SpeciesReference

738532
stoichiometry: 1.0
species: 539749
type: SpeciesReference

744339
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540161
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Methionine_C5H11NO2S
type: Species

737159
stoichiometry: 1.0
species: 539969
type: SpeciesReference

733493
stoichiometry: 1.0
species: 540013
type: SpeciesReference

541898
value: 0.0
type: LocalParameter

541930
value: 0.0
type: LocalParameter

542931
value: 0.0
type: LocalParameter

740899
stoichiometry: 1.0
species: 539574
type: SpeciesReference

543242
value: 0.0
type: LocalParameter

757419
stoichiometry: 1.0
species: 539760
type: SpeciesReference

543176
value: 0.0
type: LocalParameter

733929
stoichiometry: 0.281
species: 539643
type: SpeciesReference

745707
stoichiometry: 1.0
species: 539611
type: SpeciesReference

544014
value: 999999.0
type: LocalParameter

755294
stoichiometry: 1.0
species: 539638
type: SpeciesReference

540162
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Sodium_Na
type: Species

543689
value: 0.0
type: LocalParameter

543454
value: 999999.0
type: LocalParameter

738653
stoichiometry: 2.0
species: 539783
type: SpeciesReference

747993
stoichiometry: 1.0
species: 539686
type: SpeciesReference

542932
value: 0.0
type: LocalParameter

753216
stoichiometry: 1.0
species: 540092
type: SpeciesReference

542143
value: 999999.0
type: LocalParameter

540322
reactant: 732853
type: Reaction
kinetic law: 732901
fast: false
name: anthranilate phosphoribosyltransferase
reactant: 732865
product: 732877
product: 732889
reversible: false
notes: Abbreviation: R_ANPRT Synonyms: _0 EC Number: 2.4.2.18 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : anth + prpp --> ppi + pran Confidence Level: 2 genes: LOCUS:BPLAN_218#ABBREVIATION:trpD#ECNUMBERS:4.1.3.27,-!-,2.4.2.18# proteins: NAME:anthranilate synthase II#ABBREVIATION:TrpD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_218)

540385
kinetic law: 735127
type: Reaction
name: Fatty acid biosynthesis (n-C16:1)
product: 735078
product: 735090
reactant: 735017
notes: Abbreviation: R_C161SN Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : actACP + (19) h + (6) malACP + (13) nadph --> (6) ACP + (6) co2 + (7) h2o + hdeACP + (13) nadp Confidence Level: 2 tv genes: LOCUS:BPLAN_596#ABBREVIATION:fabZ#ECNUMBERS:4.2.1.-# LOCUS:none#ABBREVIATION:fabA#ECNUMBERS:4.2.1.60# LOCUS:BPLAN_294#ABBREVIATION:fabI#ECNUMBERS:1.3.1.9# LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# LOCUS:BPLAN_524#ABBREVIATION:fabH#ECNUMBERS:2.3.1.41# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase#ABBREVIATION:FabH# NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# NAME:Enoyl-(acyl-carrier-protein) reductase (NADH)#ABBREVIATION:FabI# NAME:beta-hydroxydecanoyl thioester dehydrase#ABBREVIATION:FabA# NAME:(3R)-hydroxymyriostoyl-(acyl carrier protein) dehydratase#ABBREVIATION:FabZ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596) and (BPLAN_555) or (BPLAN_524) and (BPLAN_576) and (BPLAN_294)
product: 735115
product: 735066
reversible: false
fast: false
product: 735102
reactant: 735054
reactant: 735029
reactant: 735042

541426
notes: Abbreviation: R_UMPK Synonyms: _9 EC Number: 2.7.4.14 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + ump <==> adp + udp Confidence Level: 2 genes: LOCUS:BPLAN_515#ABBREVIATION:pyrH#ECNUMBERS:2.7.4.-# LOCUS:BPLAN_575#ABBREVIATION:cmk#ECNUMBERS:2.7.4.14# proteins: NAME:cytidine monophosphate kinase#ABBREVIATION:Cmk# NAME:uridylate kinase#ABBREVIATION:PyrH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_515) or (BPLAN_575)
type: Reaction
product: 756960
product: 756972
reactant: 756948
name: UMP kinase
reversible: true
reactant: 756936
fast: false
kinetic law: 756985

540778
product: 742440
reactant: 742367
reactant: 742355
kinetic law: 742464
product: 742428
type: Reaction
reversible: false
notes: Abbreviation: R_GMPS2 Synonyms: _0 EC Number: 6.3.5.2 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : atp + gln-L + h2o + xmp --> amp + glu-L + gmp + (2) h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_161#ABBREVIATION:guaA#ECNUMBERS:6.3.5.2,-!-,6.3.4.1# proteins: NAME:GMP synthase#ABBREVIATION:GuaA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_161)
product: 742416
name: GMP synthase
product: 742404
fast: false
reactant: 742391
reactant: 742379
product: 742452

741094
stoichiometry: 1.0
species: 539750
type: SpeciesReference

541111
kinetic law: 750009
product: 749997
reactant: 749985
notes: Abbreviation: R_PGAMT Synonyms: _0 EC Number: 5.4.2.10 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : gam1p <==> gam6p Confidence Level: 2 involved in the pathway for bacterial cell-wall peptidoglycan and lipopolysaccharide biosyntheses, being an essential step in the pathway for UDP-N-acetylglucosamine biosynthesis. genes: LOCUS:BPLAN_476#ABBREVIATION:manB#ECNUMBERS:5.4.2.10# proteins: NAME:phosphoglucomutase/phosphomannomutase family protein#ABBREVIATION:manB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_476)
fast: false
reversible: true
name: phosphoglucosamine mutase
type: Reaction

543174
value: 999999.0
type: LocalParameter

738859
stoichiometry: 1.0
species: 540133
type: SpeciesReference

539767
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Glycerol 3-phosphate_C3H7O6P
type: Species

734290
stoichiometry: 5.2E-5
species: 540032
type: SpeciesReference

543021
value: 999999.0
type: LocalParameter

MODEL1110130001
species: 539568
species: 539649
reaction: 540748
reaction: 540634
species: 540162
species: 539959
reaction: 541318
reaction: 540940
species: 539686
reaction: 540280
species: 540155
species: 539996
reaction: 540778
reaction: 540664
species: 539753
species: 540141
reaction: 540361
reaction: 541093
reaction: 540583
species: 540189
reaction: 540226
reaction: 541282
reaction: 541114
species: 539783
reaction: 541420
species: 539710
reaction: 541435
reaction: 540451
reaction: 541048
reaction: 541129
species: 539780
reaction: 541303
reaction: 541078
reaction: 541033
species: 539766
species: 539737
reaction: 541222
reaction: 540376
species: 539955
species: 540019
species: 540037
compartment: 539476
species: 540096
reaction: 541021
reaction: 540568
species: 539628
species: 540016
reaction: 540649
reaction: 540955
species: 539665
reaction: 540553
species: 539746
reaction: 540436
reaction: 540838
species: 540053
species: 540134
reaction: 540250
reaction: 540742
species: 540171
reaction: 540823
reaction: 540421
reaction: 540220
reaction: 540385
species: 539530
reaction: 541183
reaction: 540757
species: 539762
species: 540150
species: 540198
species: 539601
species: 540107
species: 540033
reaction: 541237
reaction: 541123
reaction: 540892
reaction: 541198
species: 539599
species: 539920
species: 539496
species: 539729

541538
value: 0.0
type: LocalParameter

541333
reversible: false
notes: Abbreviation: R_THMabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + thm[e] --> adp[c] + h[c] + pi[c] + thm[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 754776
product: 754812
name: thiamine transport via ABC system
kinetic law: 754860
fast: false
type: Reaction
product: 754836
reactant: 754788
reactant: 754800
product: 754824
product: 754848

540775
kinetic law: 742343
product: 742331
reactant: 742319
notes: Abbreviation: R_GLYt Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: gly[e] <==> gly[c] Confidence Level: 2 NCD genes: LOCUS:BPLAN_180#ABBREVIATION:glpF# proteins: NAME:MIP channel, glycerol diffusion#ABBREVIATION:GlpF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_180)
fast: false
reversible: true
name: Glycine transport via diffusion
type: Reaction

542295
value: 0.0
type: LocalParameter

735368
stoichiometry: 1.0
species: 539661
type: SpeciesReference

540050
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Sedoheptulose 7-phosphate_C7H13O10P
type: Species

750264
stoichiometry: 1.0
species: 540007
type: SpeciesReference

746276
stoichiometry: 1.0
species: 539504
type: SpeciesReference

540919
reversible: false
product: 745719
name: _mevalonate kinase
kinetic law: 745743
notes: Abbreviation: R_MEVK1x Synonyms: _0 EC Number: 2.7.1.36 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c]: atp + mev-R --> 5pmev + adp + (2) h Confidence Level: 2 genes: LOCUS:BPLAN_549#ABBREVIATION:mvaK#ECNUMBERS:2.7.1.36# proteins: NAME:_mevalonate kinase#ABBREVIATION:MvaK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_549)
product: 745731
fast: false
type: Reaction
reactant: 745683
product: 745707
reactant: 745695

539980
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: O2_O2
type: Species

543302
value: 0.0
type: LocalParameter

733844
stoichiometry: 1.0
species: 540013
type: SpeciesReference

543529
value: 0.0
type: LocalParameter

539766
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: D-Glyceraldehyde_C3H6O3
type: Species

752370
stoichiometry: 1.0
species: 539607
type: SpeciesReference

541537
value: 999999.0
type: LocalParameter

540562
kinetic law: 738943
product: 738931
reactant: 738919
notes: Abbreviation: R_EX_asp_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : asp-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Aspartate exchange
type: Reaction

544093
value: 0.0
type: LocalParameter

540433
reactant: 736278
notes: Abbreviation: R_CYTK1 Synonyms: _0 EC Number: 2.7.4.14 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + cmp <==> adp + cdp Confidence Level: 2 genes: LOCUS:BPLAN_575#ABBREVIATION:cmk#ECNUMBERS:2.7.4.14# proteins: NAME:cytidine monophosphate kinase#ABBREVIATION:Cmk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_575)
product: 736314
kinetic law: 736326
type: Reaction
product: 736302
fast: false
name: cytidylate kinase (CMP)
reactant: 736290
reversible: true

748951
stoichiometry: 1.0
species: 539661
type: SpeciesReference

542376
value: 0.0
type: LocalParameter

543687
value: 0.0
type: LocalParameter

739547
stoichiometry: 1.0
species: 540154
type: SpeciesReference

543398
value: 999999.0
type: LocalParameter

732387
stoichiometry: 1.0
species: 540078
type: SpeciesReference

543172
value: 0.0
type: LocalParameter

541789
value: 0.0
type: LocalParameter

541003
name: _5'-nucleotidase (dUMP)
reactant: 747560
fast: false
product: 747584
kinetic law: 747596
product: 747572
reactant: 747548
reversible: false
notes: Abbreviation: R_NTD1 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dump + h2o --> duri + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
type: Reaction

742562
stoichiometry: 1.0
species: 539616
type: SpeciesReference

542293
value: 999999.0
type: LocalParameter

740537
stoichiometry: 1.0
species: 539733
type: SpeciesReference

542373
value: 0.0
type: LocalParameter

540277
product: 731886
name: adenylosuccinate synthase
type: Reaction
product: 731899
notes: Abbreviation: R_ADSS Synonyms: _0 EC Number: 6.3.4.4 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : asp-L + gtp + imp --> dcamp + gdp + (2) h + pi Confidence Level: 2 genes: LOCUS:BPLAN_151#ABBREVIATION:purA#ECNUMBERS:6.3.4.4# proteins: NAME:Adenylosuccinate synthetase#ABBREVIATION:PurA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_151)
reversible: false
reactant: 731825
product: 731873
reactant: 731849
reactant: 731837
fast: false
kinetic law: 731911
product: 731861

540916
reactant: 745623
type: Reaction
product: 745659
reactant: 745635
kinetic law: 745671
product: 745647
name: methionine synthase
reversible: true
notes: Abbreviation: R_METS Synonyms: _0 EC Number: 2.1.1.14 SUBSYSTEM: Methionine Metabolism Equation: [c] : 5mthf + hcys-L <==> met-L + thf Confidence Level: 2 genes: LOCUS:BPLAN_521#ABBREVIATION:metE#ECNUMBERS:2.1.1.14# proteins: NAME:Cobalamin independent methionine synthase#ABBREVIATION:MetE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_521)
fast: false

540430
type: Reaction
product: 736242
reactant: 736206
name: cytidine kinase (GTP)
product: 736230
product: 736254
reversible: false
notes: Abbreviation: R_CYTDK2 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : cytd + gtp --> cmp + gdp + h Confidence Level: 2 genes: LOCUS:BPLAN_106#ABBREVIATION:udk#ECNUMBERS:2.7.1.48# proteins: NAME:uridine/cytidine kinase#ABBREVIATION:Udk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_106)
kinetic law: 736266
reactant: 736218
fast: false

543459
value: 0.0
type: LocalParameter

540382
product: 734969
reactant: 734896
kinetic law: 735005
reactant: 734920
type: Reaction
product: 734945
product: 734981
reversible: false
product: 734957
product: 734993
reactant: 734932
reactant: 734908
fast: false
name: Fatty acid biosynthesis (n-C16:0)
notes: Abbreviation: R_C160SN Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : actACP + (20) h + (6) malACP + (14) nadph --> (6) ACP + (6) co2 + (7) h2o + (14) nadp + palmACP Confidence Level: 2 tv genes: LOCUS:BPLAN_596#ABBREVIATION:fabZ#ECNUMBERS:4.2.1.-# LOCUS:BPLAN_294#ABBREVIATION:fabI#ECNUMBERS:1.3.1.9# LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# NAME:Enoyl-(acyl-carrier-protein) reductase (NADH)#ABBREVIATION:FabI# NAME:(3R)-hydroxymyriostoyl-(acyl carrier protein) dehydratase#ABBREVIATION:FabZ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596) and (BPLAN_555) and (BPLAN_294) and (BPLAN_576)

757383
stoichiometry: 1.0
species: 539622
type: SpeciesReference

751258
stoichiometry: 1.0
species: 540023
type: SpeciesReference

754740
stoichiometry: 1.0
species: 539677
type: SpeciesReference

736856
stoichiometry: 1.0
species: 539779
type: SpeciesReference

539769
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Glycerol_C3H8O3
type: Species

745587
stoichiometry: 1.0
species: 540013
type: SpeciesReference

543304
value: 0.0
type: LocalParameter

755847
stoichiometry: 1.0
species: 540095
type: SpeciesReference

543171
value: 0.0
type: LocalParameter

541336
product: 754908
name: L-threonine transport via ABC system
notes: Abbreviation: R_THRabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + thr-L[e] --> adp[c] + h[c] + pi[c] + thr-L[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
type: Reaction
product: 754921
reactant: 754896
fast: false
reversible: false
product: 754945
product: 754933
reactant: 754884
reactant: 754872
kinetic law: 754957

542292
value: 0.0
type: LocalParameter

544091
value: 999999.0
type: LocalParameter

541535
value: 0.0
type: LocalParameter

542374
value: 0.0
type: LocalParameter

543458
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type: LocalParameter

543685
value: 999999.0
type: LocalParameter

539983
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Superoxide anion_O2
type: Species

748391
stoichiometry: 1.0
species: 539783
type: SpeciesReference

752527
stoichiometry: 1.0
species: 540013
type: SpeciesReference

738424
stoichiometry: 1.0
species: 539508
type: SpeciesReference

540053
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O-Succinylbenzoyl-CoA_C32H39N7O20P3S
type: Species

541075
reactant: 749105
kinetic law: 749141
reactant: 749093
name: O-Phospho-4-hydroxy-L-threonine:2-oxoglutarate aminotransferase
reversible: true
notes: Abbreviation: R_OHPBAT Synonyms: _0 EC Number: 2.6.1.52 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : glu-L + ohpb <==> akg + phthr Confidence Level: 2 NCD genes: LOCUS:BPLAN_212#ABBREVIATION:serC#ECNUMBERS:2.6.1.52# LOCUS:BPLAN_490#ABBREVIATION:serC#ECNUMBERS:2.6.1.52# proteins: NAME:Phosphoserine aminotransferase#ABBREVIATION:SerC# NAME:Phosphoserine aminotransferase#ABBREVIATION:SerC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_212) or (BPLAN_490)
product: 749117
type: Reaction
fast: false
product: 749129

542229
value: 0.0
type: LocalParameter

539768
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Glycerol_C3H8O3
type: Species

543528
value: 0.0
type: LocalParameter

747088
stoichiometry: 1.0
species: 539721
type: SpeciesReference

541534
value: 0.0
type: LocalParameter

541009
reversible: false
fast: false
product: 747692
name: _5'-nucleotidase (IMP)
reactant: 747668
type: Reaction
reactant: 747680
notes: Abbreviation: R_NTD11 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : h2o + imp --> ins + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 747704
kinetic law: 747716

542070
value: 0.0
type: LocalParameter

543682
value: 0.0
type: LocalParameter

541787
value: 999999.0
type: LocalParameter

736675
stoichiometry: 1.0
species: 540021
type: SpeciesReference

734182
stoichiometry: 0.146
species: 539945
type: SpeciesReference

543393
value: 0.0
type: LocalParameter

540436
notes: Abbreviation: R_CYTK2 Synonyms: _0 EC Number: 2.7.4.14 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dcmp <==> adp + dcdp Confidence Level: 2 genes: LOCUS:BPLAN_575#ABBREVIATION:cmk#ECNUMBERS:2.7.4.14# proteins: NAME:cytidine monophosphate kinase#ABBREVIATION:Cmk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_575)
name: cytidylate kinase (dCMP)
reactant: 736338
kinetic law: 736386
product: 736374
type: Reaction
reactant: 736350
fast: false
reversible: true
product: 736362

755306
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542777
value: 999999.0
type: LocalParameter

742452
stoichiometry: 1.0
species: 540021
type: SpeciesReference

541706
value: 0.0
type: LocalParameter

539659
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: ATP_C10H12N5O13P3
type: Species

742829
stoichiometry: 1.0
species: 539673
type: SpeciesReference

541072
reactant: 749043
notes: Abbreviation: R_OCTDPS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : frdp + (5) ipdp --> octdp + (5) ppi Confidence Level: 2 JLR- EC 2.5.1.- genes: LOCUS:BPLAN_338#ABBREVIATION:ispB#ECNUMBERS:2.5.1.-# proteins: NAME:Octaprenyl-diphosphate synthase#ABBREVIATION:IspB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_338)
reactant: 749030
name: Octaprenyl pyrophosphate synthase
type: Reaction
product: 749056
fast: false
product: 749069
kinetic law: 749081
reversible: false

543025
value: 0.0
type: LocalParameter

749853
stoichiometry: 2.0
species: 539779
type: SpeciesReference

542226
value: 0.0
type: LocalParameter

542379
value: 0.0
type: LocalParameter

737376
stoichiometry: 1.0
species: 539760
type: SpeciesReference

741675
stoichiometry: 1.0
species: 539611
type: SpeciesReference

542299
value: 999999.0
type: LocalParameter

542071
value: 999999.0
type: LocalParameter

543683
value: -999999.0
type: LocalParameter

540168
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Ammonium_H4N
type: Species

541533
value: 0.0
type: LocalParameter

540772
reactant: 742259
product: 742283
type: Reaction
product: 742271
kinetic law: 742307
fast: false
reversible: false
name: glycerol kinase
reactant: 742247
product: 742295
notes: Abbreviation: R_GLYK Synonyms: _0 EC Number: 2.7.1.30 SUBSYSTEM: Alternate Carbon Metabolism Equation: [c] : atp + glyc --> adp + glyc3p + h Confidence Level: 2 genes: LOCUS:BPLAN_181#ABBREVIATION:glpK#ECNUMBERS:2.7.1.30# proteins: NAME:glycerol kinase#ABBREVIATION:GlpK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_181)

746979
stoichiometry: 1.0
species: 539611
type: SpeciesReference

748549
stoichiometry: 1.0
species: 540021
type: SpeciesReference

541705
value: 0.0
type: LocalParameter

542778
value: 0.0
type: LocalParameter

755209
stoichiometry: 1.0
species: 540091
type: SpeciesReference

541330
product: 754752
reactant: 754716
product: 754740
fast: false
kinetic law: 754764
reactant: 754728
notes: Abbreviation: R_THDPS Synonyms: _0 EC Number: 2.3.1.117 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : h2o + succoa + thdp <==> coa + sl2a6o Confidence Level: 2 genes: LOCUS:BPLAN_173#ABBREVIATION:dapD#ECNUMBERS:2.3.1.117# proteins: NAME:Tetrahydrodipicolinate N-succinultransferase#ABBREVIATION:DapD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_173)
name: tetrahydrodipicolinate succinylase
type: Reaction
reactant: 754704
reversible: true

756876
stoichiometry: 1.0
species: 539779
type: SpeciesReference

743316
stoichiometry: 1.0
species: 539967
type: SpeciesReference

543305
value: -999999.0
type: LocalParameter

542227
value: 999999.0
type: LocalParameter

741445
stoichiometry: 1.0
species: 539779
type: SpeciesReference

542298
value: -999999.0
type: LocalParameter

732659
stoichiometry: 1.0
species: 539622
type: SpeciesReference

540056
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Serine_C3H7NO3
type: Species

749177
stoichiometry: 1.0
species: 539516
type: SpeciesReference

543680
value: 0.0
type: LocalParameter

541708
value: 0.0
type: LocalParameter

543395
value: 0.0
type: LocalParameter

539657
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Aspartate 4-semialdehyde_C4H7NO3
type: Species

731861
stoichiometry: 1.0
species: 539691
type: SpeciesReference

543023
value: 0.0
type: LocalParameter

744995
stoichiometry: 1.0
species: 540013
type: SpeciesReference

541709
value: 999999.0
type: LocalParameter

542377
value: 999999.0
type: LocalParameter

752647
stoichiometry: 1.0
species: 540126
type: SpeciesReference

739800
stoichiometry: 1.0
species: 540162
type: SpeciesReference

737303
stoichiometry: 1.0
species: 539969
type: SpeciesReference

542224
value: 0.0
type: LocalParameter

746530
stoichiometry: 1.0
species: 539970
type: SpeciesReference

541786
value: 0.0
type: LocalParameter

735066
stoichiometry: 6.0
species: 539601
type: SpeciesReference

541531
value: 999999.0
type: LocalParameter

542296
value: 0.0
type: LocalParameter

542073
value: 0.0
type: LocalParameter

541006
product: 747644
type: Reaction
reversible: false
name: _5'-nucleotidase (XMP)
reactant: 747620
fast: false
kinetic law: 747656
product: 747632
notes: Abbreviation: R_NTD10 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : h2o + xmp --> pi + xtsn Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 747608

543396
value: 0.0
type: LocalParameter

544095
value: 0.0
type: LocalParameter

742732
stoichiometry: 1.0
species: 540124
type: SpeciesReference

733119
stoichiometry: 1.0
species: 539643
type: SpeciesReference

753144
stoichiometry: 1.0
species: 540044
type: SpeciesReference

543307
value: 999999.0
type: LocalParameter

748258
stoichiometry: 1.0
species: 540021
type: SpeciesReference

733615
stoichiometry: 1.0
species: 539611
type: SpeciesReference

543014
value: 999999.0
type: LocalParameter

540790
reversible: false
reactant: 742696
product: 742732
type: Reaction
name: guanine deaminase
reactant: 742708
reactant: 742684
notes: Abbreviation: R_GUAD Synonyms: _0 EC Number: 3.5.4.3 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gua + h + h2o --> nh4 + xan Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
kinetic law: 742744
product: 742720

755077
stoichiometry: 1.0
species: 540041
type: SpeciesReference

751789
stoichiometry: 1.0
species: 540028
type: SpeciesReference

737812
stoichiometry: 1.0
species: 539528
type: SpeciesReference

741603
stoichiometry: 1.0
species: 539611
type: SpeciesReference

754535
stoichiometry: 1.0
species: 539953
type: SpeciesReference

539967
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Nicotinamide adenine dinucleotide phosphate_C21H25N7O17P3
type: Species

541551
value: 0.0
type: LocalParameter

540568
kinetic law: 739016
product: 739004
reactant: 738991
notes: Abbreviation: R_EX_cys_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : cys-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Cysteine exchange
type: Reaction

542999
value: -999999.0
type: LocalParameter

544075
value: 0.0
type: LocalParameter

745513
stoichiometry: 1.0
species: 540013
type: SpeciesReference

542466
value: 0.0
type: LocalParameter

539784
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: H+_H
type: Species

542572
value: 0.0
type: LocalParameter

757153
stoichiometry: 1.0
species: 539659
type: SpeciesReference

750979
stoichiometry: 1.0
species: 539521
type: SpeciesReference

731175
stoichiometry: 1.0
species: 539784
type: SpeciesReference

751862
stoichiometry: 1.0
species: 540031
type: SpeciesReference

541781
value: 999999.0
type: LocalParameter

542825
value: 999999.0
type: LocalParameter

539966
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Nicotinamide adenine dinucleotide - reduced_C21H27N7O14P2
type: Species

541552
value: 0.0
type: LocalParameter

544074
value: 0.0
type: LocalParameter

543832
value: 999999.0
type: LocalParameter

740743
stoichiometry: 1.0
species: 540021
type: SpeciesReference

542467
value: 999999.0
type: LocalParameter

540700
notes: Abbreviation: R_FMNAT Synonyms: _0 EC Number: 2.7.7.2 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + fmn + h --> fad + ppi Confidence Level: 2 genes: LOCUS:BPLAN_562#ABBREVIATION:ribF#ECNUMBERS:2.7.1.26,-!-,2.7.7.2# proteins: NAME:Flavokinase and FAD synthetase#ABBREVIATION:RibF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_562)
name: FMN adenylyltransferase
type: Reaction
product: 740731
reactant: 740706
product: 740743
kinetic law: 740755
fast: false
reactant: 740718
reversible: false
reactant: 740694

539785
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Bicarbonate_CHO3
type: Species

542712
value: 0.0
type: LocalParameter

746748
stoichiometry: 1.0
species: 539959
type: SpeciesReference

542799
value: 0.0
type: LocalParameter

539677
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Coenzyme A_C21H32N7O16P3S
type: Species

744255
stoichiometry: 1.0
species: 539524
type: SpeciesReference

543016
value: 0.0
type: LocalParameter

752202
stoichiometry: 1.0
species: 539659
type: SpeciesReference

737631
stoichiometry: 1.0
species: 539709
type: SpeciesReference

752479
stoichiometry: 1.0
species: 539508
type: SpeciesReference

736254
stoichiometry: 1.0
species: 539783
type: SpeciesReference

747451
stoichiometry: 1.0
species: 539973
type: SpeciesReference

543309
value: 0.0
type: LocalParameter

543522
value: -999999.0
type: LocalParameter

541553
value: 0.0
type: LocalParameter

739608
stoichiometry: 1.0
species: 539931
type: SpeciesReference

541318
notes: Abbreviation: R_SUCD1i Synonyms: _0 EC Number: 1.3.99.1 SUBSYSTEM: Citric Acid Cycle Equation: [c] : fad + succ <==> fadh2 + fum Confidence Level: 2 JLR - made an irreversible version of the SUCD1 reaction genes: LOCUS:BPLAN_482#ABBREVIATION:sdhC# LOCUS:BPLAN_481#ABBREVIATION:sdhA#ECNUMBERS:1.3.99.1# LOCUS:BPLAN_480#ABBREVIATION:sdhB#ECNUMBERS:1.3.99.1# proteins: NAME:succinate dehydrogenase#ABBREVIATION:Sdh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_482 and BPLAN_481 and BPLAN_480)
reactant: 754449
product: 754461
reactant: 754437
product: 754474
kinetic law: 754486
name: succinate dehydrogenase
reversible: true
fast: false
type: Reaction

541784
value: 0.0
type: LocalParameter

749310
stoichiometry: 1.0
species: 539673
type: SpeciesReference

544077
value: 999999.0
type: LocalParameter

542573
value: 0.0
type: LocalParameter

542822
value: 0.0
type: LocalParameter

539782
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Hydrogen sulfide_H2S
type: Species

542798
value: 0.0
type: LocalParameter

749430
stoichiometry: 1.0
species: 540086
type: SpeciesReference

736133
stoichiometry: 1.0
species: 539685
type: SpeciesReference

738375
stoichiometry: 1.0
species: 539783
type: SpeciesReference

753096
stoichiometry: 1.0
species: 540013
type: SpeciesReference

739752
stoichiometry: 1.0
species: 539947
type: SpeciesReference

756441
stoichiometry: 1.0
species: 540013
type: SpeciesReference

543521
value: 0.0
type: LocalParameter

751486
stoichiometry: 1.0
species: 539783
type: SpeciesReference

539964
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Nicotinamide adenine dinucleotide_C21H26N7O14P2
type: Species

734399
stoichiometry: 0.402
species: 540122
type: SpeciesReference

730934
stoichiometry: 1.0
species: 539588
type: SpeciesReference

542823
value: 0.0
type: LocalParameter

541783
value: 0.0
type: LocalParameter

539679
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Cytosine_C4H5N3O
type: Species

539783
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: H+_H
type: Species

731633
stoichiometry: 1.0
species: 539798
type: SpeciesReference

542710
value: 0.0
type: LocalParameter

543830
value: 0.0
type: LocalParameter

542469
value: 0.0
type: LocalParameter

752854
stoichiometry: 1.0
species: 539779
type: SpeciesReference

539963
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Nicotinate_C6H4NO2
type: Species

543524
value: 999999.0
type: LocalParameter

742842
stoichiometry: 1.0
species: 539779
type: SpeciesReference

756066
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543018
value: 0.0
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731006
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species: 539990
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species: 539482
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species: 539707
type: SpeciesReference

542209
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type: LocalParameter

542683
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type: LocalParameter

542796
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type: LocalParameter

741871
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species: 539760
type: SpeciesReference

755613
stoichiometry: 1.0
species: 539749
type: SpeciesReference

544079
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type: LocalParameter

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stoichiometry: 1.0
species: 540114
type: SpeciesReference

543837
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type: LocalParameter

542828
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type: LocalParameter

756115
stoichiometry: 1.0
species: 539532
type: SpeciesReference

746324
stoichiometry: 2.8
species: 539784
type: SpeciesReference

737595
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species: 539953
type: SpeciesReference

744026
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543019
value: -999999.0
type: LocalParameter

755691
stoichiometry: 1.0
species: 539779
type: SpeciesReference

746071
stoichiometry: 1.0
species: 539638
type: SpeciesReference

542208
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746480
stoichiometry: 1.0
species: 539967
type: SpeciesReference

744765
stoichiometry: 1.0
species: 539967
type: SpeciesReference

541315
name: succinate transport via proton symport (2 H)
reactant: 754389
reactant: 754377
kinetic law: 754425
fast: false
product: 754401
product: 754413
notes: Abbreviation: R_SUCCt2_2 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: (2) h[e] + succ[e] --> (2) h[c] + succ[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_282#ABBREVIATION:dctA# proteins: NAME:C4-dicarboxylate transporter#ABBREVIATION:DctA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_282)
type: Reaction
reversible: false

539789
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: cis-hexadec-9-enoyl-[acyl-carrier protein] (n-C16:1)_C27H49N2O8PRS
type: Species

539673
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: CO2_CO2
type: Species

542795
value: 999999.0
type: LocalParameter

732889
stoichiometry: 1.0
species: 540023
type: SpeciesReference

543949
value: -999999.0
type: LocalParameter

543836
value: 0.0
type: LocalParameter

539560
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-(1-D-Ribitylamino)-5-aminouracil_C9H16N4O6
type: Species

542996
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type: LocalParameter

542829
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type: LocalParameter

541780
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type: LocalParameter

539961
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Nicotinate_C6H4NO2
type: Species

543526
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type: LocalParameter

750604
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species: 540015
type: SpeciesReference

740129
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species: 540189
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756912
stoichiometry: 1.0
species: 540100
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734920
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species: 539939
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542681
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743733
stoichiometry: 1.0
species: 539534
type: SpeciesReference

735771
stoichiometry: 2.0
species: 539783
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735588
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species: 539673
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742211
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species: 539768
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731319
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species: 539779
type: SpeciesReference

750130
stoichiometry: 1.0
species: 539611
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543948
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542826
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type: LocalParameter

746143
stoichiometry: 1.0
species: 539966
type: SpeciesReference

734338
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species: 540086
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542680
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543389
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542570
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type: LocalParameter

539675
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: CO2_CO2
type: Species

539562
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate_C9H11N3O9P
type: Species

542793
value: 0.0
type: LocalParameter

543834
value: 0.0
type: LocalParameter

539787
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Homocysteine_C4H9NO2S
type: Species

755548
stoichiometry: 1.0
species: 540093
type: SpeciesReference

542998
value: 0.0
type: LocalParameter

747800
stoichiometry: 1.0
species: 539779
type: SpeciesReference

540565
kinetic law: 738979
product: 738967
reactant: 738955
notes: Abbreviation: R_EX_co2_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : co2 <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: CO2 exchange
type: Reaction

742891
stoichiometry: 1.0
species: 539659
type: SpeciesReference

542719
value: 0.0
type: LocalParameter

542886
value: 0.0
type: LocalParameter

541207
fast: false
reactant: 752082
reactant: 752069
kinetic law: 752118
product: 752106
product: 752094
reversible: false
notes: Abbreviation: R_PSP_L Synonyms: _0 EC Number: 3.1.3.3 SUBSYSTEM: Glycine and Serine Metabolism Equation: [c] : h2o + pser-L --> pi + ser-L Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
type: Reaction
name: phosphoserine phosphatase (L-serine)

743013
stoichiometry: 2.0
species: 539964
type: SpeciesReference

543946
value: 0.0
type: LocalParameter

542151
value: 0.0
type: LocalParameter

731091
stoichiometry: 1.0
species: 539641
type: SpeciesReference

542579
value: -999999.0
type: LocalParameter

731995
stoichiometry: 1.0
species: 539967
type: SpeciesReference

748041
stoichiometry: 1.0
species: 539779
type: SpeciesReference

731801
stoichiometry: 1.0
species: 539747
type: SpeciesReference

542687
value: 0.0
type: LocalParameter

543235
value: 0.0
type: LocalParameter

735612
stoichiometry: 1.0
species: 539679
type: SpeciesReference

756997
stoichiometry: 1.0
species: 539794
type: SpeciesReference

542792
value: 0.0
type: LocalParameter

747232
stoichiometry: 1.0
species: 539689
type: SpeciesReference

746432
stoichiometry: 1.0
species: 539659
type: SpeciesReference

734702
stoichiometry: 5.0
species: 539601
type: SpeciesReference

730717
stoichiometry: 1.0
species: 539760
type: SpeciesReference

540853
kinetic law: 744098
product: 744086
reactant: 744074
notes: Abbreviation: R_IPDDIi Synonyms: _0 EC Number: 5.3.3.2 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : ipdp <==> dmpp Confidence Level: 2 JLR- added irreversible form of IPDDI genes: LOCUS:BPLAN_445#ABBREVIATION:idi#ECNUMBERS:5.3.3.2# proteins: NAME:isopentenyl diphosphate isomerase#ABBREVIATION:Idi# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_445)
fast: false
reversible: true
name: isopentenyl-diphosphate D-isomerase
type: Reaction

542152
value: 0.0
type: LocalParameter

754304
stoichiometry: 1.0
species: 540053
type: SpeciesReference

539564
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Amino-6-(5'-phosphoribitylamino)uracil_C9H15N4O9P
type: Species

542686
value: 0.0
type: LocalParameter

730874
stoichiometry: 1.0
species: 539634
type: SpeciesReference

749285
stoichiometry: 1.0
species: 539783
type: SpeciesReference

541297
name: shikimate dehydrogenase
notes: Abbreviation: R_SHK3Dr Synonyms: _0 EC Number: 1.1.1.25 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 3dhsk + h + nadph <==> nadp + skm Confidence Level: 2 JLR- added reversible form of SHK3D genes: LOCUS:BPLAN_492#ABBREVIATION:ydiB#ECNUMBERS:1.1.1.25# proteins: NAME:putative shikimate 5-dehydrogenase#ABBREVIATION:YdiB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_492)
product: 754002
type: Reaction
reactant: 753990
product: 754014
reactant: 753978
kinetic law: 754026
reactant: 753966
reversible: true
fast: false

543234
value: 0.0
type: LocalParameter

737486
stoichiometry: 1.0
species: 539783
type: SpeciesReference

741118
stoichiometry: 1.0
species: 539677
type: SpeciesReference

739680
stoichiometry: 1.0
species: 539937
type: SpeciesReference

753663
stoichiometry: 1.0
species: 539622
type: SpeciesReference

748610
stoichiometry: 1.0
species: 539783
type: SpeciesReference

740237
stoichiometry: 1.0
species: 540198
type: SpeciesReference

542717
value: 0.0
type: LocalParameter

542888
value: 0.0
type: LocalParameter

750021
stoichiometry: 1.0
species: 539540
type: SpeciesReference

543839
value: 999999.0
type: LocalParameter

540850
product: 744038
product: 744050
kinetic law: 744062
type: Reaction
reactant: 743990
reversible: false
fast: false
product: 744026
reactant: 744002
reactant: 744014
name: IMP dehydrogenase
notes: Abbreviation: R_IMPD Synonyms: _0 EC Number: 1.1.1.205 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : h2o + imp + nad --> h + nadh + xmp Confidence Level: 2 genes: LOCUS:BPLAN_474#ABBREVIATION:guaB#ECNUMBERS:1.1.1.205# proteins: NAME:Inosine-5'-monophosphate dehydrogenase#ABBREVIATION:GuaB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_474)

543944
value: 999999.0
type: LocalParameter

542790
value: 0.0
type: LocalParameter

757045
stoichiometry: 2.0
species: 539783
type: SpeciesReference

737412
stoichiometry: 1.0
species: 540013
type: SpeciesReference

755499
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542460
value: -999999.0
type: LocalParameter

751630
stoichiometry: 1.0
species: 539779
type: SpeciesReference

742953
stoichiometry: 1.0
species: 539790
type: SpeciesReference

541441
notes: Abbreviation: R_URIK2 Synonyms: _0 EC Number: 2.7.1.48 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gtp + uri --> gdp + h + ump Confidence Level: 2 genes: LOCUS:BPLAN_106#ABBREVIATION:udk#ECNUMBERS:2.7.1.48# proteins: NAME:uridine/cytidine kinase#ABBREVIATION:Udk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_106)
reversible: false
reactant: 757226
type: Reaction
fast: false
product: 757250
product: 757238
name: uridine kinase (GTP:Uridine)
reactant: 757213
product: 757262
kinetic law: 757274

542154
value: 0.0
type: LocalParameter

539671
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: CMP_C9H12N3O8P
type: Species

731427
stoichiometry: 1.0
species: 539667
type: SpeciesReference

754945
stoichiometry: 1.0
species: 540087
type: SpeciesReference

543232
value: 0.0
type: LocalParameter

539566
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Amino-6-(5'-phosphoribosylamino)uracil_C9H13N4O9P
type: Species

542684
value: 0.0
type: LocalParameter

541204
notes: Abbreviation: R_PSERT Synonyms: _0 EC Number: 2.6.1.52 SUBSYSTEM: Glycine and Serine Metabolism Equation: [c] : 3php + glu-L <==> akg + pser-L Confidence Level: 2 genes: LOCUS:BPLAN_212#ABBREVIATION:serC#ECNUMBERS:2.6.1.52# LOCUS:BPLAN_490#ABBREVIATION:serC#ECNUMBERS:2.6.1.52# proteins: NAME:Phosphoserine aminotransferase#ABBREVIATION:SerC# NAME:Phosphoserine aminotransferase#ABBREVIATION:SerC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_212) or (BPLAN_490)
name: phosphoserine transaminase
reactant: 752019
fast: false
type: Reaction
reactant: 752007
product: 752044
product: 752032
kinetic law: 752056
reversible: true

740453
stoichiometry: 1.0
species: 539702
type: SpeciesReference

542889
value: -999999.0
type: LocalParameter

751922
stoichiometry: 1.0
species: 540013
type: SpeciesReference

542461
value: 999999.0
type: LocalParameter

743843
stoichiometry: 1.0
species: 539914
type: SpeciesReference

756176
stoichiometry: 1.0
species: 540005
type: SpeciesReference

750326
stoichiometry: 1.0
species: 540014
type: SpeciesReference

734447
stoichiometry: 0.7302
species: 540021
type: SpeciesReference

735831
stoichiometry: 1.0
species: 539779
type: SpeciesReference

752142
stoichiometry: 1.0
species: 540056
type: SpeciesReference

543942
value: -999999.0
type: LocalParameter

541949
value: -999999.0
type: LocalParameter

540856
fast: false
type: Reaction
reversible: false
name: _3-isopropylmalate dehydrogenase
product: 744159
reactant: 744110
product: 744135
kinetic law: 744171
notes: Abbreviation: R_IPMD Synonyms: _0 EC Number: 1.1.1.85 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 3c2hmp + nad --> 3c4mop + h + nadh Confidence Level: 2 genes: LOCUS:BPLAN_564#ABBREVIATION:leuB#ECNUMBERS:1.1.1.85# proteins: NAME:Isopropylmalate dehydrogenase#ABBREVIATION:LeuB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_564)
reactant: 744123
product: 744147

542575
value: 999999.0
type: LocalParameter

542820
value: 0.0
type: LocalParameter

743673
stoichiometry: 1.0
species: 539779
type: SpeciesReference

733264
stoichiometry: 1.0
species: 540117
type: SpeciesReference

539780
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: H2O_H2O
type: Species

542715
value: 999999.0
type: LocalParameter

541891
value: 0.0
type: LocalParameter

744485
stoichiometry: 1.0
species: 539967
type: SpeciesReference

543743
value: 0.0
type: LocalParameter

741712
stoichiometry: 1.0
species: 540013
type: SpeciesReference

543239
value: 0.0
type: LocalParameter

738195
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543941
value: 0.0
type: LocalParameter

541801
value: 0.0
type: LocalParameter

745623
stoichiometry: 1.0
species: 539576
type: SpeciesReference

746857
stoichiometry: 1.0
species: 539611
type: SpeciesReference

736591
stoichiometry: 1.0
species: 539494
type: SpeciesReference

539568
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-phosphoribosyl-5-carboxyaminoimidazole_C9H11N3O9P
type: Species

542463
value: 0.0
type: LocalParameter

542576
value: 0.0
type: LocalParameter

539781
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Hydrogen sulfide_H2S
type: Species

747788
stoichiometry: 1.0
species: 539694
type: SpeciesReference

744401
stoichiometry: 1.0
species: 539486
type: SpeciesReference

744545
stoichiometry: 1.0
species: 539601
type: SpeciesReference

754183
stoichiometry: 2.0
species: 539783
type: SpeciesReference

757322
stoichiometry: 1.0
species: 539611
type: SpeciesReference

542689
value: 999999.0
type: LocalParameter

542464
value: 0.0
type: LocalParameter

541947
value: 0.0
type: LocalParameter

733553
stoichiometry: 1.0
species: 539783
type: SpeciesReference

751594
stoichiometry: 1.0
species: 539659
type: SpeciesReference

752069
stoichiometry: 1.0
species: 539779
type: SpeciesReference

539969
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Nicotinamide adenine dinucleotide phosphate - reduced_C21H26N7O17P3
type: Species

749201
stoichiometry: 1.0
species: 539783
type: SpeciesReference

541444
reactant: 757286
reactant: 757298
product: 757346
name: L-valine transport via ABC system
product: 757359
reactant: 757310
fast: false
notes: Abbreviation: R_VALabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + val-L[e] --> adp[c] + h[c] + pi[c] + val-L[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
type: Reaction
reversible: false
product: 757322
product: 757334
kinetic law: 757371

542713
value: 0.0
type: LocalParameter

756333
stoichiometry: 1.0
species: 539783
type: SpeciesReference

744838
stoichiometry: 1.0
species: 539783
type: SpeciesReference

734787
stoichiometry: 16.0
species: 539783
type: SpeciesReference

543741
value: 999999.0
type: LocalParameter

750823
stoichiometry: 1.0
species: 539673
type: SpeciesReference

747632
stoichiometry: 1.0
species: 540013
type: SpeciesReference

746640
stoichiometry: 1.0
species: 540031
type: SpeciesReference

543237
value: 999999.0
type: LocalParameter

748463
stoichiometry: 1.0
species: 539783
type: SpeciesReference

730485
stoichiometry: 1.0
species: 539779
type: SpeciesReference

541948
value: 0.0
type: LocalParameter

752250
stoichiometry: 1.0
species: 540021
type: SpeciesReference

741932
stoichiometry: 1.0
species: 539760
type: SpeciesReference

542578
value: 0.0
type: LocalParameter

543461
value: 999999.0
type: LocalParameter

541892
value: 0.0
type: LocalParameter

736362
stoichiometry: 1.0
species: 539611
type: SpeciesReference

752310
stoichiometry: 1.0
species: 540040
type: SpeciesReference

736024
stoichiometry: 1.0
species: 540038
type: SpeciesReference

739462
stoichiometry: 1.0
species: 539782
type: SpeciesReference

543736
value: 0.0
type: LocalParameter

744135
stoichiometry: 1.0
species: 539526
type: SpeciesReference

739113
stoichiometry: 1.0
species: 540141
type: SpeciesReference

735139
stoichiometry: 1.0
species: 539605
type: SpeciesReference

542891
value: 999999.0
type: LocalParameter

752744
stoichiometry: 1.0
species: 539970
type: SpeciesReference

542007
value: 0.0
type: LocalParameter

540313
reversible: true
reactant: 732671
product: 732696
reactant: 732659
name: L-alanine transaminase
kinetic law: 732708
fast: false
product: 732684
notes: Abbreviation: R_ALATA_L Synonyms: _0 EC Number: 2.6.1.2 SUBSYSTEM: Glutamate metabolism Equation: [c] : akg + ala-L <==> glu-L + pyr Confidence Level: 2 genes: LOCUS:BPLAN_185#ABBREVIATION:ilvE#ECNUMBERS:2.6.1.42,-!-,2.6.1.2# proteins: NAME:Branched-chain-amino-acid aminotransferase#ABBREVIATION:IlvE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_185)
type: Reaction

540177
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Phosphate_HO4P
type: Species

543463
value: 0.0
type: LocalParameter

542088
value: 0.0
type: LocalParameter

541435
kinetic law: 757141
product: 757129
reactant: 757117
notes: Abbreviation: R_UREAt Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: urea[e] <==> urea[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_180#ABBREVIATION:glpF# proteins: NAME:MIP channel, glycerol diffusion#ABBREVIATION:GlpF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_180)
fast: false
reversible: true
name: Urea transport via facilitate diffusion
type: Reaction

541882
value: 0.0
type: LocalParameter

540991
kinetic law: 747341
product: 747329
reactant: 747317
notes: Abbreviation: R_NH4t Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: nh4[e] <==> nh4[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: ammonia reversible transport
type: Reaction

541210
fast: false
product: 752178
notes: Abbreviation: R_PSSA_Pam Synonyms: _0 EC Number: 2.7.8.8 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : (0.02) cdpdag_Pam + ser-L --> cmp + h + (0.02) ps_Pam Confidence Level: 2 tv genes: LOCUS:BPLAN_109#ABBREVIATION:pssA#ECNUMBERS:2.7.8.8# proteins: NAME:Phosphatidylserine synthase#ABBREVIATION:PssA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_109)
product: 752154
name: Phosphatidylserine syntase
type: Reaction
product: 752166
reactant: 752130
kinetic law: 752190
reversible: false
reactant: 752142

544023
value: 0.0
type: LocalParameter

541805
value: 999999.0
type: LocalParameter

756804
stoichiometry: 1.0
species: 540112
type: SpeciesReference

737739
stoichiometry: 1.0
species: 539545
type: SpeciesReference

542947
value: 999999.0
type: LocalParameter

735429
stoichiometry: 1.0
species: 539667
type: SpeciesReference

543167
value: 999999.0
type: LocalParameter

735976
stoichiometry: 1.0
species: 539684
type: SpeciesReference

742611
stoichiometry: 3.0
species: 539779
type: SpeciesReference

541192
reversible: true
fast: false
product: 751789
reactant: 751752
notes: Abbreviation: R_PROt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + pro-L[e] <==> h[c] + pro-L[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
name: L-proline reversible transport via proton symport
reactant: 751764
kinetic law: 751801
product: 751777
type: Reaction

744086
stoichiometry: 1.0
species: 539715
type: SpeciesReference

746372
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542006
value: 999999.0
type: LocalParameter

540280
type: Reaction
reversible: false
notes: Abbreviation: R_AGMT Synonyms: _0 EC Number: 3.5.3.11 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : agm + h2o --> ptrc + urea Confidence Level: 2 genes: LOCUS:BPLAN_574#ABBREVIATION:speB#ECNUMBERS:3.5.3.11# proteins: NAME:agmatinase#ABBREVIATION:SpeB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_574)
reactant: 731923
fast: false
kinetic law: 731971
product: 731959
name: agmatinase
reactant: 731935
product: 731947

739101
stoichiometry: 1.0
species: 539740
type: SpeciesReference

542089
value: 999999.0
type: LocalParameter

743231
stoichiometry: 1.0
species: 539638
type: SpeciesReference

541883
value: 999999.0
type: LocalParameter

541804
value: 0.0
type: LocalParameter

735283
stoichiometry: 1.0
species: 539977
type: SpeciesReference

540634
kinetic law: 739812
product: 739800
reactant: 739788
notes: Abbreviation: R_EX_na1_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : na1 <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Sodium exchange
type: Reaction

731741
stoichiometry: 1.0
species: 539638
type: SpeciesReference

540427
notes: Abbreviation: R_CYTD Synonyms: _0 EC Number: 3.5.4.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : cytd + h + h2o --> nh4 + uri Confidence Level: 2 genes: LOCUS:BPLAN_144#ABBREVIATION:cdd#ECNUMBERS:3.5.4.5# proteins: NAME:cytidine/deoxycytidine deaminase#ABBREVIATION:Cdd# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_144)
fast: false
reactant: 736157
reactant: 736145
type: Reaction
product: 736182
reactant: 736133
name: cytidine deaminase
kinetic law: 736194
reversible: false
product: 736169

541945
value: 999999.0
type: LocalParameter

742355
stoichiometry: 1.0
species: 539659
type: SpeciesReference

544025
value: 0.0
type: LocalParameter

542009
value: 0.0
type: LocalParameter

541291
kinetic law: 753882
product: 753869
product: 753857
reactant: 753845
notes: Abbreviation: R_SHCHC Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 5ephchc --> 2shchc + pyr Confidence Level: 2 JLR genes: LOCUS:BPLAN_504#ABBREVIATION:menH#ECNUMBERS:4.2.99.20# proteins: NAME:SHCHC cynthase#ABBREVIATION:MenH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_504)
fast: false
reversible: false
name: _2-succinyl-6-hydroxy-2,4-cyclohexadiene 1-carboxylate synthase
type: Reaction

543465
value: 0.0
type: LocalParameter

737279
stoichiometry: 1.0
species: 539704
type: SpeciesReference

543734
value: 999999.0
type: LocalParameter

738640
stoichiometry: 1.0
species: 539554
type: SpeciesReference

540283
name: N-acetyl-g-glutamyl-phosphate reductase
notes: Abbreviation: R_AGPR Synonyms: _0 EC Number: 1.2.1.38 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : acg5sa + nadp + pi <==> acg5p + h + nadph Confidence Level: 2 genes: LOCUS:BPLAN_326#ABBREVIATION:argC#ECNUMBERS:1.2.1.38# proteins: NAME:N-acetylglutamate phosphate reductase#ABBREVIATION:ArgC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_326)
reversible: true
reactant: 731995
kinetic law: 732055
product: 732019
product: 732031
fast: false
reactant: 732007
product: 732043
reactant: 731983
type: Reaction

741323
stoichiometry: 1.0
species: 539783
type: SpeciesReference

750471
stoichiometry: 1.0
species: 539611
type: SpeciesReference

540922
kinetic law: 745792
product: 745780
reactant: 745767
reactant: 745755
notes: Abbreviation: R_MTHFC Synonyms: _0 EC Number: 3.5.4.9 SUBSYSTEM: Folate Metabolism Equation: [c] : h2o + methf <==> 10fthf Confidence Level: 2 genes: LOCUS:BPLAN_198#ABBREVIATION:folD#ECNUMBERS:1.5.1.5,-!-,3.5.4.9# proteins: NAME:Methylene-tetrahydrofolate dehydrogenase#ABBREVIATION:FolD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_198)
fast: false
reversible: true
name: methenyltetrahydrofolate cyclohydrolase
type: Reaction

542086
value: 0.0
type: LocalParameter

734061
stoichiometry: 1.0E-5
species: 539731
type: SpeciesReference

755427
stoichiometry: 1.0
species: 539704
type: SpeciesReference

540859
kinetic law: 744219
product: 744207
product: 744195
reactant: 744183
notes: Abbreviation: R_IPPMIa Synonyms: _0 EC Number: 4.2.1.33 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 2ippm + h2o <==> 3c2hmp Confidence Level: 2 genes: LOCUS:BPLAN_565#ABBREVIATION:leuD#ECNUMBERS:4.2.1.33,-!-,4.2.1.35# LOCUS:BPLAN_566#ABBREVIATION:leuC#ECNUMBERS:4.2.1.33# proteins: NAME:Isopropylmalate isomerase small subunit#ABBREVIATION:LeuC# NAME:Isopropylmalate isomerase large subunit#ABBREVIATION:LeuD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_566 and BPLAN_565)
fast: false
reversible: true
name: _3-isopropylmalate dehydratase
type: Reaction

541944
value: 0.0
type: LocalParameter

756658
stoichiometry: 1.0
species: 540108
type: SpeciesReference

542949
value: 0.0
type: LocalParameter

541081
reversible: false
reactant: 749237
fast: false
reactant: 749225
kinetic law: 749273
notes: Abbreviation: R_OMCDC Synonyms: _0 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 3c4mop + h --> 4mop + co2 Confidence Level: 2 Continuation of EC 1.1.1.85 reaction genes: LOCUS:BPLAN_564#ABBREVIATION:leuB#ECNUMBERS:1.1.1.85# proteins: NAME:Isopropylmalate dehydrogenase#ABBREVIATION:LeuB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_564)
name: _2-Oxo-4-methyl-3-carboxypentanoate decarboxylation
product: 749261
type: Reaction
product: 749249

740670
stoichiometry: 1.0
species: 540013
type: SpeciesReference

749997
stoichiometry: 1.0
species: 539751
type: SpeciesReference

737051
stoichiometry: 1.0
species: 539536
type: SpeciesReference

739329
stoichiometry: 1.0
species: 540147
type: SpeciesReference

543169
value: 0.0
type: LocalParameter

738003
stoichiometry: 1.0
species: 539707
type: SpeciesReference

735405
stoichiometry: 1.0
species: 540013
type: SpeciesReference

542211
value: 0.0
type: LocalParameter

542892
value: 0.0
type: LocalParameter

541885
value: 0.0
type: LocalParameter

541943
value: 0.0
type: LocalParameter

540994
product: 747402
fast: false
kinetic law: 747414
type: Reaction
reversible: false
product: 747390
reactant: 747366
name: nicotinamide-nucleotide adenylyltransferase
notes: Abbreviation: R_NMNAT Synonyms: _0 EC Number: 2.7.7.1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + h + nmn --> nad + ppi Confidence Level: 2 genes: LOCUS:BPLAN_313#ABBREVIATION:nadD#ECNUMBERS:2.7.7.18# proteins: NAME:Nicotinic acid mononucleotide adenyltransferase#ABBREVIATION:NadD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_313)
reactant: 747354
reactant: 747378

742684
stoichiometry: 1.0
species: 539777
type: SpeciesReference

541802
value: 0.0
type: LocalParameter

540316
reactant: 732732
notes: Abbreviation: R_ALATA_L2 Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : ala-L + pydx5p --> pyam5p + pyr Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
product: 732756
type: Reaction
fast: false
name: alanine transaminase
kinetic law: 732768
product: 732744
reversible: false
reactant: 732720

541105
product: 749853
reversible: false
reactant: 749805
notes: Abbreviation: R_PDX5PS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : dxyl5p + nad + phthr --> co2 + h + (2) h2o + nadh + pdx5p + pi Confidence Level: 2 JLR- two reactions combined (intermediate of the first is unknown) genes: LOCUS:BPLAN_559#ABBREVIATION:pdxA#ECNUMBERS:1.1.1.262# LOCUS:BPLAN_617#ABBREVIATION:pdxJ# proteins: NAME:Pyridoxine 5-phosphate biosynthetic protein#ABBREVIATION:PdxAJ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_617 and BPLAN_559)
product: 749889
type: Reaction
kinetic law: 749901
product: 749865
name: Pyridoxine 5'-phosphate synthase
product: 749841
fast: false
reactant: 749817
product: 749829
reactant: 749793
product: 749877

738544
stoichiometry: 1.0
species: 539783
type: SpeciesReference

755994
stoichiometry: 1.0
species: 539760
type: SpeciesReference

543676
value: -999999.0
type: LocalParameter

745141
stoichiometry: 1.0
species: 539936
type: SpeciesReference

755281
stoichiometry: 1.0
species: 540084
type: SpeciesReference

757262
stoichiometry: 1.0
species: 540114
type: SpeciesReference

745381
stoichiometry: 1.0
species: 539967
type: SpeciesReference

744327
stoichiometry: 1.0
species: 539677
type: SpeciesReference

541195
name: phosphoribosylpyrophosphate synthetase
product: 751850
product: 751838
reactant: 751813
kinetic law: 751874
type: Reaction
fast: false
product: 751862
notes: Abbreviation: R_PRPPS Synonyms: _0 EC Number: 2.7.6.1 SUBSYSTEM: Histidine Metabolism Equation: [c] : atp + r5p --> amp + h + prpp Confidence Level: 2 genes: LOCUS:BPLAN_142#ABBREVIATION:prsA#ECNUMBERS:2.7.6.1# proteins: NAME:phosphoribosylpyrophosphate synthetase#ABBREVIATION:PrsA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_142)
reactant: 751825
reversible: false

543312
value: -999999.0
type: LocalParameter

749622
stoichiometry: 0.02
species: 539999
type: SpeciesReference

754038
stoichiometry: 1.0
species: 539659
type: SpeciesReference

748319
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543230
value: 999999.0
type: LocalParameter

745405
stoichiometry: 1.0
species: 539969
type: SpeciesReference

543164
value: 0.0
type: LocalParameter

733481
stoichiometry: 1.0
species: 539967
type: SpeciesReference

541886
value: 0.0
type: LocalParameter

736446
stoichiometry: 1.0
species: 539970
type: SpeciesReference

742091
stoichiometry: 1.0
species: 539673
type: SpeciesReference

542895
value: 0.0
type: LocalParameter

751378
stoichiometry: 1.0
species: 539779
type: SpeciesReference

540174
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Phenylalanine_C9H11NO2
type: Species

542155
value: 999999.0
type: LocalParameter

543466
value: 0.0
type: LocalParameter

543739
value: -999999.0
type: LocalParameter

756018
stoichiometry: 1.0
species: 539496
type: SpeciesReference

730680
stoichiometry: 1.0
species: 539611
type: SpeciesReference

745719
stoichiometry: 1.0
species: 539578
type: SpeciesReference

543311
value: 0.0
type: LocalParameter

544026
value: 0.0
type: LocalParameter

541438
product: 757177
reversible: true
notes: Abbreviation: R_URIDK2r Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dump <==> adp + dudp Confidence Level: 2 JLR- reversible form of URIDK2 genes: LOCUS:BPLAN_515#ABBREVIATION:pyrH#ECNUMBERS:2.7.4.-# proteins: NAME:uridylate kinase#ABBREVIATION:PyrH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_515)
type: Reaction
reactant: 757153
name: uridylate kinase (dUMP)
kinetic law: 757201
fast: false
reactant: 757165
product: 757189

740803
stoichiometry: 1.0
species: 539948
type: SpeciesReference

741082
stoichiometry: 1.0
species: 539590
type: SpeciesReference

743171
stoichiometry: 4.0
species: 539970
type: SpeciesReference

742151
stoichiometry: 1.0
species: 539771
type: SpeciesReference

542944
value: 0.0
type: LocalParameter

754728
stoichiometry: 1.0
species: 540082
type: SpeciesReference

541941
value: 0.0
type: LocalParameter

542894
value: 0.0
type: LocalParameter

540310
product: 732635
reversible: true
notes: Abbreviation: R_ALAt2r Synonyms: _0 SUBSYSTEM: Putative Transporters Equation: ala-L[e] + h[e] <==> ala-L[c] + h[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
name: L-alanine reversible transport via proton symport
product: 732623
type: Reaction
fast: false
kinetic law: 732647
reactant: 732610
reactant: 732598

540397
kinetic law: 735453
product: 735441
reactant: 735429
notes: Abbreviation: R_CHORM Synonyms: _0 EC Number: 5.4.99.5 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : chor <==> pphn Confidence Level: 2 genes: LOCUS:BPLAN_299#ABBREVIATION:pheA#ECNUMBERS:5.4.99.5,-!-,4.2.1.51# LOCUS:BPLAN_297#ABBREVIATION:tyrA#ECNUMBERS:5.4.99.5,-!-,1.3.1.12# LOCUS:BPLAN_296#ABBREVIATION:aroGpheA#ECNUMBERS:2.5.1.54,-!-,4.2.1.51,-!-,5.4.99.5# proteins: NAME:_bifunctional putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase#ABBREVIATION:AroGPheA# NAME:Chorismate mutase T#ABBREVIATION:TyrA# NAME:Chorismate mutase P#ABBREVIATION:PheA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_297) or (BPLAN_299) or (BPLAN_296)
fast: false
reversible: true
name: chorismate mutase
type: Reaction

540171
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: O2_O2
type: Species

542158
value: 0.0
type: LocalParameter

734568
stoichiometry: 10.0
species: 539969
type: SpeciesReference

543678
value: 999999.0
type: LocalParameter

748695
stoichiometry: 1.0
species: 540021
type: SpeciesReference

736506
stoichiometry: 1.0
species: 539687
type: SpeciesReference

541808
value: 0.0
type: LocalParameter

732249
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543738
value: 0.0
type: LocalParameter

542945
value: 0.0
type: LocalParameter

541102
name: pyridoxine 5'-phosphate oxidase
type: Reaction
reactant: 749744
notes: Abbreviation: R_PDX5PO Synonyms: _0 EC Number: 1.4.3.5 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : o2 + pdx5p --> h2o2 + pydx5p Confidence Level: 2 NCD genes: LOCUS:BPLAN_583#ABBREVIATION:pdxH#ECNUMBERS:1.4.3.5# proteins: NAME:Pyridoxine 5-phosphate oxidase#ABBREVIATION:PdxH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_583)
fast: false
product: 749768
reactant: 749732
kinetic law: 749781
reversible: false
product: 749756

541888
value: 0.0
type: LocalParameter

540637
kinetic law: 739849
product: 739837
reactant: 739824
notes: Abbreviation: R_EX_nac_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : nac <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Nicotinate exchange
type: Reaction

541807
value: 0.0
type: LocalParameter

542897
value: 999999.0
type: LocalParameter

541940
value: 999999.0
type: LocalParameter

736712
stoichiometry: 1.0
species: 539690
type: SpeciesReference

542157
value: 0.0
type: LocalParameter

753906
stoichiometry: 1.0
species: 540074
type: SpeciesReference

741799
stoichiometry: 1.0
species: 539969
type: SpeciesReference

543468
value: 999999.0
type: LocalParameter

544028
value: 999999.0
type: LocalParameter

541294
reactant: 753906
notes: Abbreviation: R_SHCHCS2 Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : ichor + ssaltpp --> 2shchc + pyr + thmpp Confidence Level: 2 JLR genes: LOCUS:BPLAN_577#ABBREVIATION:menD#ECNUMBERS:4.1.1.71,-!-,2.2.1.9# proteins: NAME:bifunctional 2-oxoglutarate decarboxylase/2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase#ABBREVIATION:MenD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_577)
product: 753942
name: _2-succinyl-6-hydroxy-2,4-cyclohexadiene 1-carboxylate synthase
type: Reaction
kinetic law: 753954
reversible: false
fast: false
reactant: 753894
product: 753930
product: 753918

541889
value: 999999.0
type: LocalParameter

541213
fast: false
product: 752238
reversible: false
notes: Abbreviation: R_PTPATi Synonyms: _0 EC Number: 2.7.7.3 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + h + pan4p --> dpcoa + ppi Confidence Level: 2 JLR- irreversible form of PTPAT genes: LOCUS:BPLAN_354#ABBREVIATION:coaD#ECNUMBERS:2.7.7.3# proteins: NAME:phosphopantetheine adenyltransferase#ABBREVIATION:CoaD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_354)
name: pantetheine-phosphate adenylyltransferase
reactant: 752202
reactant: 752214
type: Reaction
kinetic law: 752262
reactant: 752226
product: 752250

541198
reactant: 751898
reversible: false
product: 751910
type: Reaction
product: 751922
name: _3-phosphoshikimate 1-carboxyvinyltransferase
reactant: 751886
notes: Abbreviation: R_PSCVT Synonyms: _0 EC Number: 2.5.1.19 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : pep + skm5p --> 3psme + pi Confidence Level: 2 genes: LOCUS:BPLAN_236#ABBREVIATION:aroA#ECNUMBERS:2.5.1.19# proteins: NAME:_3-phosphoshikimate 1-carboxyvinyltransferase#ABBREVIATION:AroA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_236)
kinetic law: 751935
fast: false

543165
value: 0.0
type: LocalParameter

733771
stoichiometry: 1.0
species: 540031
type: SpeciesReference

540925
reversible: true
product: 745852
reactant: 745804
kinetic law: 745864
product: 745840
fast: false
notes: Abbreviation: R_MTHFD Synonyms: _0 EC Number: 1.5.1.5 SUBSYSTEM: Folate Metabolism Equation: [c] : mlthf + nadp <==> h + methf + nadph Confidence Level: 2 genes: LOCUS:BPLAN_198#ABBREVIATION:folD#ECNUMBERS:1.5.1.5,-!-,3.5.4.9# proteins: NAME:Methylene-tetrahydrofolate dehydrogenase#ABBREVIATION:FolD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_198)
type: Reaction
product: 745828
reactant: 745816
name: methylenetetrahydrofolate dehydrogenase (NADP)

540286
product: 732105
fast: false
name: adenosylhomocysteinase
reversible: true
type: Reaction
notes: Abbreviation: R_AHC Synonyms: _0 EC Number: 3.3.1.1 SUBSYSTEM: Methionine Metabolism Equation: [c] : ahcys + h2o <==> adn + hcys-L Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 732117
reactant: 732079
product: 732092
reactant: 732067

541777
value: 1.0
type: LocalParameter

754752
stoichiometry: 1.0
species: 540071
type: SpeciesReference

540289
product: 732153
reactant: 732129
notes: Abbreviation: R_AICART Synonyms: _0 EC Number: 2.1.2.3 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : 10fthf + aicar --> fprica + thf Confidence Level: 2 genes: LOCUS:BPLAN_159#ABBREVIATION:purH#ECNUMBERS:3.5.4.10,-!-,2.1.2.3# proteins: NAME:AICAR transformylase and IMP cyclohydrolase#ABBREVIATION:PurH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_159)
kinetic law: 732177
product: 732165
reversible: false
fast: false
reactant: 732141
type: Reaction
name: phosphoribosylaminoimidazolecarboxamide formyltransferase

540571
kinetic law: 739052
product: 739040
reactant: 739028
notes: Abbreviation: R_EX_dhor_S_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : dhor-S <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: S-Dihydroorotate
type: Reaction

542361
value: 0.0
type: LocalParameter

542080
value: 0.0
type: LocalParameter

543160
value: 999999.0
type: LocalParameter

743450
stoichiometry: 1.0
species: 540079
type: SpeciesReference

746966
stoichiometry: 1.0
species: 539718
type: SpeciesReference

543316
value: 0.0
type: LocalParameter

745599
stoichiometry: 1.0
species: 540021
type: SpeciesReference

540709
kinetic law: 740887
product: 740875
reactant: 740863
notes: Abbreviation: R_FRUt1r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: fru[e] <==> fru[c] Confidence Level: 2 genes: LOCUS:BPLAN_437 proteins: NAME:ABC transporter, ATP-binding and permease protein citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_437)
fast: false
reversible: true
name: D-fructose transport in via uniport
type: Reaction

757213
stoichiometry: 1.0
species: 539776
type: SpeciesReference

540394
reactant: 735344
product: 735356
name: carbamoyl-phosphate synthase (glutamine-hydrolysing)
product: 735368
notes: Abbreviation: R_CBPS Synonyms: _0 EC Number: 6.3.5.5 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : (2) atp + gln-L + h2o + hco3 --> (2) adp + cbp + glu-L + (2) h + pi Confidence Level: 2 genes: LOCUS:BPLAN_324#ABBREVIATION:carA#ECNUMBERS:6.3.5.5# LOCUS:BPLAN_323#ABBREVIATION:carB#ECNUMBERS:6.3.5.5# proteins: NAME:carbamoyl-phosphate synthetase#ABBREVIATION:Car# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_324 and BPLAN_323)
product: 735380
reversible: false
product: 735405
product: 735393
type: Reaction
reactant: 735320
reactant: 735332
fast: false
kinetic law: 735417
reactant: 735308

539970
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Ammonium_H4N
type: Species

543515
value: 0.0
type: LocalParameter

738159
stoichiometry: 1.0
species: 539783
type: SpeciesReference

736868
stoichiometry: 1.0
species: 539724
type: SpeciesReference

738751
stoichiometry: 1.0
species: 540128
type: SpeciesReference

542940
value: 999999.0
type: LocalParameter

540065
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Shikimate_C7H9O5
type: Species

542362
value: 0.0
type: LocalParameter

755835
stoichiometry: 1.0
species: 539784
type: SpeciesReference

541778
value: 0.0
type: LocalParameter

541324
type: Reaction
reversible: true
reactant: 754571
product: 754620
fast: false
product: 754595
notes: Abbreviation: R_SUCOAS Synonyms: _0 EC Number: 6.2.1.5 SUBSYSTEM: Citric Acid Cycle Equation: [c] : atp + coa + succ <==> adp + pi + succoa Confidence Level: 2 genes: LOCUS:BPLAN_049#ABBREVIATION:sucC#ECNUMBERS:6.2.1.5# LOCUS:BPLAN_594#ABBREVIATION:sucD#ECNUMBERS:6.2.1.5# proteins: NAME:succinyl-CoA synthetase alpha chain#ABBREVIATION:SucD# NAME:succinyl-CoA synthetase beta chain#ABBREVIATION:SucC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_049 and BPLAN_594)
kinetic law: 754632
reactant: 754559
product: 754608
reactant: 754583
name: succinyl-CoA synthetase (ADP-forming)

541087
reactant: 749346
reactant: 749358
product: 749370
notes: Abbreviation: R_ORPT Synonyms: _0 EC Number: 2.4.2.10 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : orot + prpp --> orot5p + ppi Confidence Level: 2 genes: LOCUS:BPLAN_128#ABBREVIATION:pyrFE#ECNUMBERS:2.4.2.10# proteins: NAME:Orotidine 5'-phosphate decarboxylase-Orotate phosphoribosyltransferase#ABBREVIATION:PyrFE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_128)
kinetic law: 749394
name: orotate phosphoribosyltransferase
reversible: false
product: 749382
fast: false
type: Reaction

543388
value: 0.0
type: LocalParameter

755173
stoichiometry: 1.0
species: 539749
type: SpeciesReference

741688
stoichiometry: 1.0
species: 539756
type: SpeciesReference

540928
product: 745913
name: _5,10-methylenetetrahydrofolate reductase (NADH)
type: Reaction
reactant: 745901
reversible: true
fast: false
reactant: 745889
notes: Abbreviation: R_MTHFR2 Synonyms: _0 SUBSYSTEM: Folate Metabolism Equation: [c] : h + mlthf + nadh <==> 5mthf + nad Confidence Level: 2 tv genes: LOCUS:BPLAN_195#ABBREVIATION:metF#ECNUMBERS:1.7.99.5# proteins: NAME:Methylenetetrahydrofolate reductase#ABBREVIATION:MetF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_195)
kinetic law: 745937
product: 745925
reactant: 745877

543673
value: 0.0
type: LocalParameter

738436
stoichiometry: 1.0
species: 540116
type: SpeciesReference

542217
value: 0.0
type: LocalParameter

752539
stoichiometry: 1.0
species: 539796
type: SpeciesReference

754680
stoichiometry: 1.0
species: 539730
type: SpeciesReference

540787
notes: Abbreviation: R_GTPCII2 Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : gtp + (3) h2o --> 25drapp + for + (2) h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_317#ABBREVIATION:ribBA#ECNUMBERS:3.5.4.25,-!-,4.1.99.12# proteins: NAME:_bifunctional 3,4 dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II#ABBREVIATION:RibBA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_317)
reversible: false
product: 742635
reactant: 742611
product: 742648
type: Reaction
name: GTP cyclohydrolase II (25drapp)
product: 742623
fast: false
kinetic law: 742672
product: 742660
reactant: 742599

735356
stoichiometry: 2.0
species: 539611
type: SpeciesReference

750252
stoichiometry: 1.0
species: 539622
type: SpeciesReference

540706
kinetic law: 740851
product: 740839
reactant: 740827
notes: Abbreviation: R_FORt Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: for[e] <==> for[c] Confidence Level: 1 renamed from FORTR to FORt NCD genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: formate transport via diffusion
type: Reaction

541321
reactant: 754498
product: 754523
kinetic law: 754547
type: Reaction
notes: Abbreviation: R_SUCD4 Synonyms: _0 SUBSYSTEM: Oxidative Phosphorylation Equation: [c] : fadh2 + mqn8 <==> fad + mql8 Confidence Level: 2 JLR genes: LOCUS:BPLAN_482#ABBREVIATION:sdhC# LOCUS:BPLAN_481#ABBREVIATION:sdhA#ECNUMBERS:1.3.99.1# LOCUS:BPLAN_480#ABBREVIATION:sdhB#ECNUMBERS:1.3.99.1# proteins: NAME:succinate dehydrogenase#ABBREVIATION:Sdh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_482 and BPLAN_481 and BPLAN_480)
reactant: 754511
name: succinate dehydrogenase
fast: false
reversible: true
product: 754535

543162
value: 0.0
type: LocalParameter

733832
stoichiometry: 4.0
species: 539784
type: SpeciesReference

543517
value: 999999.0
type: LocalParameter

539779
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: H2O_H2O
type: Species

542218
value: 0.0
type: LocalParameter

543314
value: 999999.0
type: LocalParameter

540062
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Shikimate 5-phosphate_C7H8O8P
type: Species

731391
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540574
kinetic law: 739089
product: 739077
reactant: 739064
notes: Abbreviation: R_EX_fe2_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : fe2 <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Fe2+ exchange
type: Reaction

544081
value: 0.0
type: LocalParameter

542942
value: 0.0
type: LocalParameter

540421
reactant: 735976
product: 736012
kinetic law: 736036
reactant: 735988
type: Reaction
name: cystathionine b-lyase
product: 736024
fast: false
reversible: false
product: 736000
notes: Abbreviation: R_CYSTL Synonyms: _0 EC Number: 4.4.1.8 SUBSYSTEM: Methionine Metabolism Equation: [c] : cyst-L + h2o --> hcys-L + nh4 + pyr Confidence Level: 2 genes: LOCUS:BPLAN_072#ABBREVIATION:metBC#ECNUMBERS:4.4.1.8# proteins: NAME:Cystathionine gamma-synthase-cystathionine beta-lyase#ABBREVIATION:MetC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_072)

542000
value: 999999.0
type: LocalParameter

539778
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Hydrogen peroxide_H2O2
type: Species

543386
value: 0.0
type: LocalParameter

749105
stoichiometry: 1.0
species: 539989
type: SpeciesReference

541549
value: 999999.0
type: LocalParameter

732805
stoichiometry: 1.0
species: 539615
type: SpeciesReference

751027
stoichiometry: 1.0
species: 539783
type: SpeciesReference

755763
stoichiometry: 1.0
species: 540094
type: SpeciesReference

745031
stoichiometry: 1.0
species: 539760
type: SpeciesReference

542364
value: 0.0
type: LocalParameter

543675
value: 0.0
type: LocalParameter

739535
stoichiometry: 1.0
species: 539791
type: SpeciesReference

744983
stoichiometry: 1.0
species: 539932
type: SpeciesReference

753990
stoichiometry: 1.0
species: 539969
type: SpeciesReference

749189
stoichiometry: 1.0
species: 539615
type: SpeciesReference

543011
value: 0.0
type: LocalParameter

732189
stoichiometry: 1.0
species: 539620
type: SpeciesReference

540781
name: geranyltranstransferase
product: 742513
reversible: false
kinetic law: 742525
notes: Abbreviation: R_GRTT Synonyms: _0 EC Number: 2.5.1.10 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : grdp + ipdp --> frdp + ppi Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reactant: 742489
type: Reaction
reactant: 742477
product: 742501

540631
kinetic law: 739776
product: 739764
reactant: 739752
notes: Abbreviation: R_EX_met_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : met-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Methionine exchange
type: Reaction

540068
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-Succinyl-LL-2,6-diaminoheptanedioate_C11H16N2O7
type: Species

544082
value: 0.0
type: LocalParameter

541544
value: 0.0
type: LocalParameter

752635
stoichiometry: 1.0
species: 540013
type: SpeciesReference

746542
stoichiometry: 1.0
species: 539638
type: SpeciesReference

542212
value: 0.0
type: LocalParameter

542365
value: 999999.0
type: LocalParameter

542003
value: 0.0
type: LocalParameter

750762
stoichiometry: 1.0
species: 540001
type: SpeciesReference

748536
stoichiometry: 1.0
species: 539783
type: SpeciesReference

539669
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Citrulline_C6H13N3O3
type: Species

543519
value: 0.0
type: LocalParameter

543384
value: 999999.0
type: LocalParameter

543841
value: 0.0
type: LocalParameter

540703
notes: Abbreviation: R_FOMETR Synonyms: _0 EC Number: 2.1.2.10 SUBSYSTEM: Cofactor Metabolism Equation: [c] : 5fthf + h <==> h2o + methf Confidence Level: 2 RM genes: LOCUS:BPLAN_447#ABBREVIATION:gcvT#ECNUMBERS:2.1.2.10# proteins: NAME:Glycine cleavage complex, T#ABBREVIATION:GcvT# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_447)
type: Reaction
kinetic law: 740815
fast: false
reactant: 740767
product: 740791
name: aminomethyltransferase
product: 740803
reversible: true
reactant: 740779

735078
stoichiometry: 6.0
species: 539673
type: SpeciesReference

541774
value: 0.0
type: LocalParameter

542085
value: 0.0
type: LocalParameter

751402
stoichiometry: 1.0
species: 540026
type: SpeciesReference

543319
value: -999999.0
type: LocalParameter

542002
value: 0.0
type: LocalParameter

733107
stoichiometry: 1.0
species: 539611
type: SpeciesReference

742720
stoichiometry: 1.0
species: 539970
type: SpeciesReference

744195
stoichiometry: 1.0
species: 539510
type: SpeciesReference

543381
value: 0.0
type: LocalParameter

544084
value: 999999.0
type: LocalParameter

734170
stoichiometry: 0.326
species: 539936
type: SpeciesReference

756549
stoichiometry: 1.0
species: 540105
type: SpeciesReference

542789
value: 999999.0
type: LocalParameter

544021
value: 999999.0
type: LocalParameter

540319
product: 732805
reactant: 732793
reactant: 732780
fast: false
type: Reaction
kinetic law: 732841
name: S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8)
product: 732817
reversible: false
product: 732829
notes: Abbreviation: R_AMMQLT8 Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 2dmmql8 + amet --> ahcys + h + mql8 Confidence Level: 2 AMF genes: LOCUS:BPLAN_525#ABBREVIATION:ubiE#ECNUMBERS:2.1.1.-# proteins: NAME:_2-DMK methyltransferase and 2-octaprenyl-6-methoxy-1,4-benzoquinonol methylase#ABBREVIATION:UbiE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_525)

736663
stoichiometry: 0.02
species: 539665
type: SpeciesReference

541546
value: -999999.0
type: LocalParameter

542082
value: -999999.0
type: LocalParameter

540997
product: 747475
fast: false
name: nicotinate-nucleotide adenylyltransferase
type: Reaction
product: 747463
kinetic law: 747487
reactant: 747426
notes: Abbreviation: R_NNAT Synonyms: _0 EC Number: 2.7.7.18 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + h + nicrnt --> dnad + ppi Confidence Level: 2 genes: LOCUS:BPLAN_313#ABBREVIATION:nadD#ECNUMBERS:2.7.7.18# proteins: NAME:Nicotinic acid mononucleotide adenyltransferase#ABBREVIATION:NadD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_313)
reactant: 747438
reactant: 747451
reversible: false

541775
value: 999999.0
type: LocalParameter

540424
reactant: 736061
product: 736097
product: 736085
type: Reaction
reactant: 736073
name: cytochrome oxidase bo3 (ubiquinol-8: 2.5 protons)
kinetic law: 736121
reactant: 736049
product: 736109
notes: Abbreviation: R_CYTBO3 Synonyms: _0 SUBSYSTEM: Oxidative Phosphorylation Equation: (2.5) h[c] + (0.5) o2[c] + mql8[c] --> (2.5) h[e] + h2o[c] + mqn8[c] Confidence Level: 2 EC Number: 1.9.3.1 genes: LOCUS:BPLAN_228#ABBREVIATION:cyoC#ECNUMBERS:1.9.3.1# LOCUS:BPLAN_226#ABBREVIATION:cyoBA#ECNUMBERS:1.9.3.1# proteins: NAME:cytochrome oxidase bo3#ABBREVIATION:CyoABC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_228 and BPLAN_226)
fast: false
reversible: false

737388
stoichiometry: 1.0
species: 539611
type: SpeciesReference

732019
stoichiometry: 1.0
species: 539592
type: SpeciesReference

542214
value: -999999.0
type: LocalParameter

543318
value: 0.0
type: LocalParameter

542367
value: 0.0
type: LocalParameter

749841
stoichiometry: 1.0
species: 539783
type: SpeciesReference

541084
type: Reaction
reversible: false
kinetic law: 749334
name: orotidine-5'-phosphate decarboxylase
notes: Abbreviation: R_OMPDC Synonyms: _0 EC Number: 4.1.1.23 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : h + orot5p --> co2 + ump Confidence Level: 2 genes: LOCUS:BPLAN_128#ABBREVIATION:pyrFE#ECNUMBERS:4.1.1.23# proteins: NAME:Orotidine 5'-phosphate decarboxylase-Orotate phosphoribosyltransferase#ABBREVIATION:PyrFE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_128)
reactant: 749285
reactant: 749297
fast: false
product: 749310
product: 749322

755319
stoichiometry: 1.0
species: 540086
type: SpeciesReference

543382
value: 0.0
type: LocalParameter

543012
value: -999999.0
type: LocalParameter

756888
stoichiometry: 1.0
species: 540098
type: SpeciesReference

733071
stoichiometry: 1.0
species: 539645
type: SpeciesReference

540784
product: 742562
kinetic law: 742587
name: GTP cyclohydrolase I
reactant: 742550
reactant: 742538
notes: Abbreviation: R_GTPCI Synonyms: _0 EC Number: 3.5.4.16 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : gtp + h2o --> ahdt + for Confidence Level: 2 The reaction involves hydrolysis of two C-N bonds and isomerization of the pentose unit; the recyclization may be non-enzymic genes: LOCUS:BPLAN_070#ABBREVIATION:folE#ECNUMBERS:3.5.4.16# proteins: NAME:GTP cyclohydrolase I#ABBREVIATION:FolE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_070)
fast: false
type: Reaction
product: 742575
reversible: false

543671
value: 999999.0
type: LocalParameter

541545
value: 0.0
type: LocalParameter

542083
value: 999999.0
type: LocalParameter

542368
value: 0.0
type: LocalParameter

542215
value: 999999.0
type: LocalParameter

542004
value: 0.0
type: LocalParameter

741433
stoichiometry: 1.0
species: 539753
type: SpeciesReference

540391
kinetic law: 735295
product: 735283
product: 735271
reactant: 735259
notes: Abbreviation: R_CAT Synonyms: _4 EC Number: 1.11.1.6 SUBSYSTEM: Unassigned Equation: [c] : (2) h2o2 --> (2) h2o + o2 Confidence Level: 2 JLR genes: LOCUS:BPLAN_291#ABBREVIATION:ahpC#ECNUMBERS:1.11.1.6# proteins: NAME:peroxiredoxin#ABBREVIATION:ahpC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_291)
fast: false
reversible: false
name: catalase
type: Reaction

743304
stoichiometry: 1.0
species: 539795
type: SpeciesReference

742575
stoichiometry: 1.0
species: 539739
type: SpeciesReference

539688
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dAMP_C10H12N5O6P
type: Species

539750
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Glucosamine 1-phosphate_C6H13NO8P
type: Species

730545
stoichiometry: 1.0
species: 539590
type: SpeciesReference

542436
value: -999999.0
type: LocalParameter

541619
value: 999999.0
type: LocalParameter

541057
reversible: false
notes: Abbreviation: R_NTPP8 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : h2o + utp --> h + ppi + ump Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
kinetic law: 748780
name: Nucleoside triphosphate pyrophosphorylase (utp)
reactant: 748731
product: 748744
type: Reaction
product: 748756
fast: false
product: 748768
reactant: 748719

740597
stoichiometry: 1.0
species: 539659
type: SpeciesReference

745574
stoichiometry: 1.0
species: 539636
type: SpeciesReference

542581
value: 999999.0
type: LocalParameter

543892
value: 0.0
type: LocalParameter

740117
stoichiometry: 1.0
species: 540039
type: SpeciesReference

750520
stoichiometry: 1.0
species: 539556
type: SpeciesReference

543514
value: 0.0
type: LocalParameter

753384
stoichiometry: 1.0
species: 540093
type: SpeciesReference

734302
stoichiometry: 0.035
species: 540034
type: SpeciesReference

541562
value: 0.0
type: LocalParameter

540577
kinetic law: 739125
product: 739113
reactant: 739101
notes: Abbreviation: R_EX_for_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : for <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Formate exchange
type: Reaction

747812
stoichiometry: 1.0
species: 539696
type: SpeciesReference

754824
stoichiometry: 1.0
species: 539783
type: SpeciesReference

539751
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Glucosamine 6-phosphate_C6H13NO8P
type: Species

755379
stoichiometry: 1.0
species: 540090
type: SpeciesReference

755600
stoichiometry: 1.0
species: 539611
type: SpeciesReference

543893
value: -999999.0
type: LocalParameter

539687
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dADP_C10H12N5O9P2
type: Species

541618
value: 0.0
type: LocalParameter

542437
value: 999999.0
type: LocalParameter

742283
stoichiometry: 1.0
species: 539767
type: SpeciesReference

738087
stoichiometry: 1.0
species: 540021
type: SpeciesReference

542582
value: 0.0
type: LocalParameter

734957
stoichiometry: 6.0
species: 539673
type: SpeciesReference

543377
value: 999999.0
type: LocalParameter

539996
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Orotate_C5H3N2O4
type: Species

739873
stoichiometry: 1.0
species: 540168
type: SpeciesReference

540463
notes: Abbreviation: R_DDPA Synonyms: _0 EC Number: 2.5.1.54 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : e4p + h2o + pep --> 2dda7p + pi Confidence Level: 2 genes: LOCUS:BPLAN_296#ABBREVIATION:aroGpheA#ECNUMBERS:2.5.1.54,-!-,4.2.1.51,-!-,5.4.99.5# proteins: NAME:_bifunctional putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase#ABBREVIATION:AroGPheA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_296)
fast: false
reversible: false
product: 736942
product: 736955
kinetic law: 736967
reactant: 736930
reactant: 736917
name: _3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase
type: Reaction
reactant: 736905

539999
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: phosphatidate (Blattabacterium Periplaneta americana)_C1836H3398O400P50
type: Species

543801
value: 0.0
type: LocalParameter

542434
value: 0.0
type: LocalParameter

539686
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Deoxyadenosine_C10H13N5O3
type: Species

539752
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N1-(5-Phospho-D-ribosyl)glycinamide_C7H14N2O8P
type: Species

741238
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543890
value: 0.0
type: LocalParameter

737535
stoichiometry: 1.0
species: 539580
type: SpeciesReference

543512
value: 0.0
type: LocalParameter

756054
stoichiometry: 1.0
species: 539611
type: SpeciesReference

738991
stoichiometry: 1.0
species: 539683
type: SpeciesReference

539685
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Cytidine_C9H13N3O5
type: Species

539753
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Glycolaldehyde_C2H4O2
type: Species

748185
stoichiometry: 1.0
species: 540013
type: SpeciesReference

731923
stoichiometry: 1.0
species: 539613
type: SpeciesReference

744038
stoichiometry: 1.0
species: 539966
type: SpeciesReference

541616
value: 0.0
type: LocalParameter

754449
stoichiometry: 1.0
species: 540076
type: SpeciesReference

746083
stoichiometry: 2.0
species: 539783
type: SpeciesReference

543379
value: 0.0
type: LocalParameter

754110
stoichiometry: 1.0
species: 539682
type: SpeciesReference

541054
type: Reaction
product: 748683
notes: Abbreviation: R_NTPP7 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dttp + h2o --> dtmp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
product: 748695
product: 748671
fast: false
name: Nucleoside triphosphate pyrophosphorylase (dttp)
reversible: false
kinetic law: 748707
reactant: 748646
reactant: 748659

753784
stoichiometry: 1.0
species: 539959
type: SpeciesReference

747354
stoichiometry: 1.0
species: 539659
type: SpeciesReference

541560
value: 999999.0
type: LocalParameter

734848
stoichiometry: 6.0
species: 539779
type: SpeciesReference

748731
stoichiometry: 1.0
species: 540121
type: SpeciesReference

750203
stoichiometry: 1.0
species: 540008
type: SpeciesReference

541615
value: 0.0
type: LocalParameter

732973
stoichiometry: 1.0
species: 540038
type: SpeciesReference

542585
value: 0.0
type: LocalParameter

756309
stoichiometry: 1.0
species: 540103
type: SpeciesReference

749346
stoichiometry: 1.0
species: 539996
type: SpeciesReference

541772
value: 0.0
type: LocalParameter

542858
value: 0.0
type: LocalParameter

747463
stoichiometry: 1.0
species: 539716
type: SpeciesReference

543620
value: -999999.0
type: LocalParameter

543510
value: 999999.0
type: LocalParameter

732323
stoichiometry: 1.0
species: 539622
type: SpeciesReference

749490
stoichiometry: 1.0
species: 540113
type: SpeciesReference

542433
value: 0.0
type: LocalParameter

741811
stoichiometry: 1.0
species: 539970
type: SpeciesReference

730922
stoichiometry: 1.0
species: 539590
type: SpeciesReference

731669
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543582
value: 0.0
type: LocalParameter

751450
stoichiometry: 1.0
species: 539659
type: SpeciesReference

541771
value: 0.0
type: LocalParameter

541566
value: 999999.0
type: LocalParameter

542859
value: 0.0
type: LocalParameter

540460
reactant: 736844
reactant: 736832
product: 736880
reversible: false
fast: false
name: deoxycytidine deaminase
product: 736868
reactant: 736856
kinetic law: 736893
notes: Abbreviation: R_DCYTD Synonyms: _0 EC Number: 3.5.4.14 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dcyt + h + h2o --> duri + nh4 Confidence Level: 2 genes: LOCUS:BPLAN_144#ABBREVIATION:cdd#ECNUMBERS:3.5.4.5# proteins: NAME:cytidine/deoxycytidine deaminase#ABBREVIATION:Cdd# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_144)
type: Reaction

756453
stoichiometry: 1.0
species: 540106
type: SpeciesReference

747512
stoichiometry: 1.0
species: 539677
type: SpeciesReference

736169
stoichiometry: 1.0
species: 539970
type: SpeciesReference

733602
stoichiometry: 1.0
species: 539552
type: SpeciesReference

738363
stoichiometry: 1.0
species: 539722
type: SpeciesReference

735710
stoichiometry: 1.0
species: 539779
type: SpeciesReference

742054
stoichiometry: 1.0
species: 539762
type: SpeciesReference

541613
value: 999999.0
type: LocalParameter

743552
stoichiometry: 1.0
species: 539797
type: SpeciesReference

542430
value: 0.0
type: LocalParameter

733143
stoichiometry: 1.0
species: 540013
type: SpeciesReference

747969
stoichiometry: 1.0
species: 539688
type: SpeciesReference

541563
value: 0.0
type: LocalParameter

744364
stoichiometry: 1.0
species: 539634
type: SpeciesReference

543622
value: 999999.0
type: LocalParameter

755089
stoichiometry: 1.0
species: 540127
type: SpeciesReference

751777
stoichiometry: 1.0
species: 539783
type: SpeciesReference

740731
stoichiometry: 1.0
species: 539731
type: SpeciesReference

733675
stoichiometry: 1.0
species: 539783
type: SpeciesReference

736470
stoichiometry: 1.0
species: 539659
type: SpeciesReference

746736
stoichiometry: 1.0
species: 539783
type: SpeciesReference

735551
stoichiometry: 1.0
species: 540041
type: SpeciesReference

539689
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dATP_C10H12N5O12P3
type: Species

542431
value: 999999.0
type: LocalParameter

540712
product: 740936
product: 740948
fast: false
kinetic law: 740960
notes: Abbreviation: R_FTHFCL Synonyms: _0 EC Number: 6.3.3.2 SUBSYSTEM: Cofactor Metabolism Equation: [c] : 5fthf + atp --> adp + methf + pi Confidence Level: 2 NCD genes: LOCUS:BPLAN_505#ABBREVIATION:ygfA#ECNUMBERS:6.3.3.2# proteins: NAME:5-formyltetrahydrofolate cyclo-ligase#ABBREVIATION:YgfA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_505)
type: Reaction
product: 740923
reactant: 740911
name: _5-formethyltetrahydrofolate cyclo-ligase
reversible: false
reactant: 740899

542584
value: 0.0
type: LocalParameter

731597
stoichiometry: 1.0
species: 539638
type: SpeciesReference

543580
value: 999999.0
type: LocalParameter

541612
value: -999999.0
type: LocalParameter

541564
value: -999999.0
type: LocalParameter

743099
stoichiometry: 1.0
species: 539793
type: SpeciesReference

752032
stoichiometry: 1.0
species: 539622
type: SpeciesReference

750967
stoichiometry: 1.0
species: 540019
type: SpeciesReference

731163
stoichiometry: 1.0
species: 539586
type: SpeciesReference

745345
stoichiometry: 1.0
species: 539986
type: SpeciesReference

757189
stoichiometry: 1.0
species: 539721
type: SpeciesReference

752358
stoichiometry: 1.0
species: 539508
type: SpeciesReference

542919
value: 0.0
type: LocalParameter

744826
stoichiometry: 1.0
species: 539611
type: SpeciesReference

744110
stoichiometry: 1.0
species: 539522
type: SpeciesReference

747572
stoichiometry: 1.0
species: 539724
type: SpeciesReference

746652
stoichiometry: 1.0
species: 539611
type: SpeciesReference

749406
stoichiometry: 1.0
species: 539622
type: SpeciesReference

750859
stoichiometry: 1.0
species: 539556
type: SpeciesReference

747620
stoichiometry: 1.0
species: 540125
type: SpeciesReference

543472
value: 0.0
type: LocalParameter

740044
stoichiometry: 1.0
species: 540018
type: SpeciesReference

542701
value: 999999.0
type: LocalParameter

730497
stoichiometry: 1.0
species: 540012
type: SpeciesReference

542918
value: 0.0
type: LocalParameter

541959
value: 0.0
type: LocalParameter

741166
stoichiometry: 1.0
species: 539955
type: SpeciesReference

542653
value: 999999.0
type: LocalParameter

541834
value: -999999.0
type: LocalParameter

736374
stoichiometry: 1.0
species: 539693
type: SpeciesReference

736012
stoichiometry: 1.0
species: 539970
type: SpeciesReference

543400
value: 0.0
type: LocalParameter

543473
value: 0.0
type: LocalParameter

731379
stoichiometry: 1.0
species: 539545
type: SpeciesReference

734278
stoichiometry: 0.21
species: 540028
type: SpeciesReference

730813
stoichiometry: 1.0
species: 539498
type: SpeciesReference

539490
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate_C13H15N4O12P
type: Species

541610
value: 0.0
type: LocalParameter

543806
value: 0.0
type: LocalParameter

542855
value: 999999.0
type: LocalParameter

731512
stoichiometry: 2.0
species: 539611
type: SpeciesReference

543951
value: 999999.0
type: LocalParameter

539534
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: C'-(3-Indolyl)-glycerol 3-phosphate_C11H12NO6P
type: Species

541835
value: 999999.0
type: LocalParameter

752286
stoichiometry: 1.0
species: 540013
type: SpeciesReference

748379
stoichiometry: 1.0
species: 539694
type: SpeciesReference

744715
stoichiometry: 1.0
species: 539969
type: SpeciesReference

736955
stoichiometry: 1.0
species: 540013
type: SpeciesReference

745949
stoichiometry: 1.0
species: 539593
type: SpeciesReference

543731
value: 0.0
type: LocalParameter

542856
value: 0.0
type: LocalParameter

733252
stoichiometry: 1.0
species: 539990
type: SpeciesReference

540820
type: Reaction
kinetic law: 743401
product: 743389
product: 743365
name: homoserine kinase
fast: false
reactant: 743341
product: 743377
reversible: false
reactant: 743353
notes: Abbreviation: R_HSK Synonyms: _0 EC Number: 2.7.1.39 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : atp + hom-L --> adp + h + phom Confidence Level: 2 genes: LOCUS:BPLAN_139#ABBREVIATION:thrB#ECNUMBERS:2.7.1.39# proteins: NAME:Homoserine kinase#ABBREVIATION:ThrB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_139)

542703
value: 0.0
type: LocalParameter

744473
stoichiometry: 1.0
species: 539488
type: SpeciesReference

754656
stoichiometry: 1.0
species: 540050
type: SpeciesReference

543809
value: -999999.0
type: LocalParameter

543470
value: 0.0
type: LocalParameter

752130
stoichiometry: 0.02
species: 539665
type: SpeciesReference

543099
value: 0.0
type: LocalParameter

735441
stoichiometry: 1.0
species: 540019
type: SpeciesReference

743661
stoichiometry: 1.0
species: 539728
type: SpeciesReference

542916
value: 0.0
type: LocalParameter

542587
value: 999999.0
type: LocalParameter

541288
name: L-serine via sodium symport
notes: Abbreviation: R_SERt4 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: na1[e] + ser-L[e] --> na1[c] + ser-L[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
reversible: false
reactant: 753796
product: 753808
reactant: 753784
fast: false
product: 753821
type: Reaction
kinetic law: 753833

755574
stoichiometry: 1.0
species: 539659
type: SpeciesReference

737751
stoichiometry: 1.0
species: 539582
type: SpeciesReference

754195
stoichiometry: 2.0
species: 539983
type: SpeciesReference

747752
stoichiometry: 1.0
species: 540013
type: SpeciesReference

543732
value: 0.0
type: LocalParameter

753492
stoichiometry: 1.0
species: 540041
type: SpeciesReference

751983
stoichiometry: 0.02
species: 540004
type: SpeciesReference

543808
value: 0.0
type: LocalParameter

540688
kinetic law: 740477
product: 740465
product: 740453
reactant: 740441
notes: Abbreviation: R_FBAa Synonyms: _0 EC Number: 4.1.2.13 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : fdp <==> dhap + g3p Confidence Level: 2 genes: LOCUS:BPLAN_163#ABBREVIATION:fbaA#ECNUMBERS:4.1.2.13# proteins: NAME:fructose-bisphosphate aldolase II#ABBREVIATION:FbaA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_163)
fast: false
reversible: true
name: fructose-bisphosphate aldolaseA
type: Reaction

543899
value: 0.0
type: LocalParameter

740622
stoichiometry: 1.0
species: 539779
type: SpeciesReference

539532
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (R)-3-Hydroxytetradecanoyl-[acyl-carrier protein]_C25H47N2O9PRS
type: Species

543953
value: 0.0
type: LocalParameter

542588
value: 0.0
type: LocalParameter

745635
stoichiometry: 1.0
species: 539787
type: SpeciesReference

542879
value: 999999.0
type: LocalParameter

542654
value: 0.0
type: LocalParameter

733191
stoichiometry: 1.0
species: 539613
type: SpeciesReference

541837
value: 0.0
type: LocalParameter

542915
value: 999999.0
type: LocalParameter

543405
value: 999999.0
type: LocalParameter

751666
stoichiometry: 1.0
species: 539760
type: SpeciesReference

540180
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: (R)-Pantothenate_C9H16NO5
type: Species

754872
stoichiometry: 1.0
species: 539659
type: SpeciesReference

743904
stoichiometry: 1.0
species: 539538
type: SpeciesReference

750411
stoichiometry: 1.0
species: 540013
type: SpeciesReference

742965
stoichiometry: 1.0
species: 540013
type: SpeciesReference

543269
value: 0.0
type: LocalParameter

540604
kinetic law: 739450
product: 739438
reactant: 739426
notes: Abbreviation: R_EX_h2o_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : h2o <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: H2O exchange
type: Reaction

543097
value: 999999.0
type: LocalParameter

539684
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Cystathionine_C7H14N2O4S
type: Species

542850
value: 0.0
type: LocalParameter

733989
stoichiometry: 0.126
species: 539681
type: SpeciesReference

543956
value: 0.0
type: LocalParameter

542876
value: 0.0
type: LocalParameter

540101
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
type: Species

542705
value: 0.0
type: LocalParameter

750314
stoichiometry: 3.0
species: 539959
type: SpeciesReference

736097
stoichiometry: 1.0
species: 539779
type: SpeciesReference

743855
stoichiometry: 1.0
species: 540013
type: SpeciesReference

751306
stoichiometry: 1.0
species: 539741
type: SpeciesReference

740489
stoichiometry: 1.0
species: 539729
type: SpeciesReference

539683
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Cysteine_C3H7NO2S
type: Species

539530
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Dehydroshikimate_C7H7O5
type: Species

543897
value: 0.0
type: LocalParameter

543955
value: 0.0
type: LocalParameter

542706
value: 0.0
type: LocalParameter

542877
value: -999999.0
type: LocalParameter

539494
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: LL-2,6-Diaminoheptanedioate_C7H14N2O4
type: Species

543802
value: -999999.0
type: LocalParameter

541831
value: 0.0
type: LocalParameter

754933
stoichiometry: 1.0
species: 540013
type: SpeciesReference

540102
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
type: Species

731439
stoichiometry: 1.0
species: 539756
type: SpeciesReference

746444
stoichiometry: 1.0
species: 539964
type: SpeciesReference

752999
stoichiometry: 1.0
species: 539611
type: SpeciesReference

543403
value: 0.0
type: LocalParameter

737473
stoichiometry: 1.0
species: 539673
type: SpeciesReference

542651
value: 0.0
type: LocalParameter

542852
value: 0.0
type: LocalParameter

543095
value: 0.0
type: LocalParameter

753590
stoichiometry: 1.0
species: 539622
type: SpeciesReference

743782
stoichiometry: 1.0
species: 539659
type: SpeciesReference

746505
stoichiometry: 1.0
species: 539659
type: SpeciesReference

540685
kinetic law: 740429
product: 740417
reactant: 740405
notes: Abbreviation: R_EX_val_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : val-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Valine exchange
type: Reaction

541832
value: 0.0
type: LocalParameter

539682
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Cysteine_C3H7NO2S
type: Species

543958
value: 999999.0
type: LocalParameter

542874
value: 0.0
type: LocalParameter

743001
stoichiometry: 1.0
species: 539793
type: SpeciesReference

756236
stoichiometry: 1.0
species: 539595
type: SpeciesReference

734739
stoichiometry: 1.0
species: 539956
type: SpeciesReference

748622
stoichiometry: 1.0
species: 540021
type: SpeciesReference

733469
stoichiometry: 1.0
species: 539657
type: SpeciesReference

543402
value: 0.0
type: LocalParameter

732671
stoichiometry: 1.0
species: 539628
type: SpeciesReference

541285
product: 753748
name: serine O-acetyltransferase
notes: Abbreviation: R_SERAT Synonyms: _4 EC Number: 2.3.1.30 SUBSYSTEM: Cysteine Metabolism Equation: [c] : accoa + ser-L <==> acser + coa Confidence Level: 2 genes: LOCUS:BPLAN_362#ABBREVIATION:cysE#ECNUMBERS:2.3.1.30# proteins: NAME:Serine acetyltransferase#ABBREVIATION:CysE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_362)
reactant: 753724
fast: false
reversible: true
kinetic law: 753772
reactant: 753736
product: 753760
type: Reaction

756393
stoichiometry: 1.0
species: 539759
type: SpeciesReference

746192
stoichiometry: 3.0
species: 539783
type: SpeciesReference

754074
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542650
value: 0.0
type: LocalParameter

543895
value: 999999.0
type: LocalParameter

543094
value: 0.0
type: LocalParameter

540607
kinetic law: 739486
product: 739474
reactant: 739462
notes: Abbreviation: R_EX_h2s_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : h2s <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Hydrogen sulfide exchange
type: Reaction

756960
stoichiometry: 1.0
species: 539611
type: SpeciesReference

542853
value: 0.0
type: LocalParameter

730655
stoichiometry: 1.0
species: 539659
type: SpeciesReference

730705
stoichiometry: 1.0
species: 539590
type: SpeciesReference

737952
stoichiometry: 1.0
species: 540021
type: SpeciesReference

540100
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
type: Species

543804
value: 999999.0
type: LocalParameter

732744
stoichiometry: 1.0
species: 540035
type: SpeciesReference

542708
value: 999999.0
type: LocalParameter

539492
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2,5-Diamino-6-(ribosylamino)-4-(3H)-pyrimidinone 5'-phosphate_C9H14N5O8P
type: Species

539681
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: CTP_C9H12N3O14P3
type: Species

540038
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Pyruvate_C3H3O3
type: Species

751198
stoichiometry: 1.0
species: 539611
type: SpeciesReference

542242
value: 0.0
type: LocalParameter

540694
kinetic law: 740585
type: Reaction
reactant: 740537
reactant: 740549
product: 740561
fast: false
name: fructose-bisphosphatase
product: 740573
notes: Abbreviation: R_FBP Synonyms: _0 EC Number: 3.1.3.11 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : fdp + h2o --> f6p + pi Confidence Level: 2 SMP genes: LOCUS:BPLAN_130#ABBREVIATION:fbp#ECNUMBERS:3.1.3.11# proteins: NAME:fructose-1,6-bisphophatase#ABBREVIATION:Fbp# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_130)
reversible: false

542648
value: 0.0
type: LocalParameter

735235
stoichiometry: 1.0
species: 539988
type: SpeciesReference

541952
value: 0.0
type: LocalParameter

542885
value: 999999.0
type: LocalParameter

540601
kinetic law: 739414
product: 739402
reactant: 739390
notes: Abbreviation: R_EX_glyclt_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : glyclt <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Glycolate exchange
type: Reaction

539498
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (S)-2-Aceto-2-hydroxybutanoate_C6H9O4
type: Species

541138
reactant: 750508
name: pantothenate kinase
type: Reaction
reversible: false
product: 750544
product: 750520
notes: Abbreviation: R_PNTK Synonyms: _0 EC Number: 2.7.1.33 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + pnto-R --> 4ppan + adp + h Confidence Level: 2 genes: LOCUS:BPLAN_503#ABBREVIATION:coaA#ECNUMBERS:2.7.1.33# proteins: NAME:pantothenate kinase#ABBREVIATION:CoaA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_503)
kinetic law: 750556
product: 750532
reactant: 750496
fast: false

541405
reactant: 756405
reactant: 756393
type: Reaction
product: 756453
product: 756429
kinetic law: 756465
reversible: false
product: 756417
reactant: 756381
fast: false
notes: Abbreviation: R_UAMAGS Synonyms: _0 EC Number: 6.3.2.9 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : atp + glu-D + uama --> adp + h + pi + uamag Confidence Level: 2 genes: LOCUS:BPLAN_254#ABBREVIATION:murD#ECNUMBERS:6.3.2.9# proteins: NAME:UDP-N-acetylmuramoylalanine-D-glutamate ligase#ABBREVIATION:MurD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_254)
name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
product: 756441

543041
value: 999999.0
type: LocalParameter

733711
stoichiometry: 1.0
species: 539653
type: SpeciesReference

738484
stoichiometry: 1.0
species: 539722
type: SpeciesReference

732439
stoichiometry: 1.0
species: 539622
type: SpeciesReference

732213
stoichiometry: 1.0
species: 539785
type: SpeciesReference

540183
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Porphobilinogen_C10H13N2O4
type: Species

541494
value: 0.0
type: LocalParameter

745201
stoichiometry: 2.0
species: 539783
type: SpeciesReference

542122
value: 0.0
type: LocalParameter

540937
notes: Abbreviation: R_NADDP Synonyms: _0 EC Number: 3.6.1.22 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : h2o + nad --> amp + (2) h + nmn Confidence Level: 2 See also EC 3.6.1.9 genes: LOCUS:BPLAN_307#ABBREVIATION:ligA#ECNUMBERS:6.5.1.2# proteins: NAME:DNA ligase#ABBREVIATION:Lig# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_307)
product: 746095
reactant: 746047
type: Reaction
product: 746071
name: NAD diphosphatase
kinetic law: 746107
fast: false
reversible: false
reactant: 746059
product: 746083

540039
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Pyruvate_C3H3O3
type: Species

542910
value: 0.0
type: LocalParameter

541495
value: 0.0
type: LocalParameter

541951
value: 999999.0
type: LocalParameter

542121
value: 0.0
type: LocalParameter

543153
value: 999999.0
type: LocalParameter

540826
reactant: 743475
product: 743501
type: Reaction
reactant: 743488
product: 743514
fast: false
kinetic law: 743527
reversible: true
name: histidinol-phosphate transaminase
notes: Abbreviation: R_HSTPT Synonyms: _0 EC Number: 2.6.1.9 SUBSYSTEM: Histidine Metabolism Equation: [c] : glu-L + imacp <==> akg + hisp Confidence Level: 2 genes: LOCUS:BPLAN_205#ABBREVIATION:hisC#ECNUMBERS:2.6.1.9# proteins: NAME:Histidinol phosphate aminotransferase#ABBREVIATION:HisC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_205)

541201
reactant: 751947
type: Reaction
reversible: false
reactant: 751959
product: 751983
product: 751971
notes: Abbreviation: R_PSD_Pam Synonyms: _0 EC Number: 4.1.1.65 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : h + (0.02) ps_Pam --> co2 + (0.02) pe_Pam Confidence Level: 2 JLR genes: LOCUS:BPLAN_411#ABBREVIATION:psd#ECNUMBERS:4.1.1.65# proteins: NAME:Phosphatidylserine decarboxylase#ABBREVIATION:Psd# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_411)
name: Phosphatidylserine decarboxylase
kinetic law: 751995
fast: false

733783
stoichiometry: 1.0
species: 540021
type: SpeciesReference

543265
value: 999999.0
type: LocalParameter

541282
type: Reaction
product: 753687
fast: false
reactant: 753675
reversible: false
notes: Abbreviation: R_SEPHCHC Synonyms: _1 EC Number: 4.1.1.71 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : ichor + akg + (2) h --> co2 + 5ephchc Confidence Level: 2 JLR genes: LOCUS:BPLAN_577#ABBREVIATION:menD#ECNUMBERS:4.1.1.71,-!-,2.2.1.9# proteins: NAME:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase#ABBREVIATION:MenD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_577)
name: _2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
reactant: 753650
reactant: 753663
product: 753699
kinetic law: 753712

745080
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543725
value: 0.0
type: LocalParameter

736724
stoichiometry: 1.0
species: 539739
type: SpeciesReference

540250
reactant: 731307
type: Reaction
fast: false
notes: Abbreviation: R_ADD Synonyms: _0 EC Number: 3.5.4.2 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : ade + h + h2o --> hxan + nh4 Confidence Level: 1 note: reaction also occures spontaneously - oxidative deaminination (MKA) genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 731355
name: adenine deaminase
reactant: 731295
reversible: false
product: 731331
product: 731343
reactant: 731319

753918
stoichiometry: 1.0
species: 539520
type: SpeciesReference

740261
stoichiometry: 1.0
species: 540088
type: SpeciesReference

541496
value: 999999.0
type: LocalParameter

542883
value: -999999.0
type: LocalParameter

756744
stoichiometry: 8.0
species: 540021
type: SpeciesReference

748307
stoichiometry: 1.0
species: 539772
type: SpeciesReference

745417
stoichiometry: 1.0
species: 540038
type: SpeciesReference

733905
stoichiometry: 0.488
species: 539628
type: SpeciesReference

539496
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: meso-2,6-Diaminoheptanedioate_C7H14N2O4
type: Species

541769
value: 999999.0
type: LocalParameter

542861
value: 999999.0
type: LocalParameter

541954
value: 0.0
type: LocalParameter

744934
stoichiometry: 1.0
species: 539779
type: SpeciesReference

539528
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Dehydroquinate_C7H9O6
type: Species

543479
value: 0.0
type: LocalParameter

757250
stoichiometry: 1.0
species: 539783
type: SpeciesReference

745153
stoichiometry: 1.0
species: 540013
type: SpeciesReference

750399
stoichiometry: 1.0
species: 539560
type: SpeciesReference

738556
stoichiometry: 1.0
species: 540038
type: SpeciesReference

744691
stoichiometry: 2.0
species: 539783
type: SpeciesReference

540186
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Proline_C5H9NO2
type: Species

740405
stoichiometry: 1.0
species: 540123
type: SpeciesReference

542241
value: 0.0
type: LocalParameter

541402
product: 756357
product: 756333
reactant: 756309
kinetic law: 756369
name: UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
reactant: 756321
notes: Abbreviation: R_UAGPT3 Synonyms: _0 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : uacgam + uagmda --> h + uaagmda + udp Confidence Level: 2 No exact EC number yet: EC 2.4.1.- catalyzed by murG gene in Bacillus subtilis Also found in H. pylori. Ref: Mendz pg 161 (tv) genes: LOCUS:BPLAN_256#ABBREVIATION:murG#ECNUMBERS:2.4.1.227# proteins: NAME:N-acetylglucosamine transferase#ABBREVIATION:MurG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_256)
reversible: false
fast: false
product: 756345
type: Reaction

542882
value: 0.0
type: LocalParameter

749659
stoichiometry: 1.0
species: 539964
type: SpeciesReference

543151
value: 0.0
type: LocalParameter

541135
type: Reaction
product: 750471
reactant: 750447
name: phosphomevalonate kinase
product: 750459
kinetic law: 750484
reversible: false
notes: Abbreviation: R_PMEVKx Synonyms: _0 EC Number: 2.7.4.2 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : 5pmev + atp --> 5dpmev + adp Confidence Level: 2 genes: LOCUS:BPLAN_549#ABBREVIATION:mvaK#ECNUMBERS:2.7.4.2# proteins: NAME:phosphomevalonate kinase#ABBREVIATION:mvaK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_549)
reactant: 750435
fast: false

754716
stoichiometry: 1.0
species: 540078
type: SpeciesReference

740839
stoichiometry: 1.0
species: 539739
type: SpeciesReference

742163
stoichiometry: 1.0
species: 539784
type: SpeciesReference

543727
value: 999999.0
type: LocalParameter

540829
kinetic law: 743564
product: 743552
reactant: 743540
notes: Abbreviation: R_ICHORSi Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : chor --> ichor Confidence Level: 2 JLR- added irreversible form of ICHORS genes: LOCUS:BPLAN_443#ABBREVIATION:menF#ECNUMBERS:5.4.4.2# proteins: NAME:isochorismate synthase II#ABBREVIATION:EntC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_443)
fast: false
reversible: false
name: Isochorismate Synthase
type: Reaction

543267
value: 0.0
type: LocalParameter

543260
value: 0.0
type: LocalParameter

541956
value: 999999.0
type: LocalParameter

542913
value: 0.0
type: LocalParameter

755439
stoichiometry: 1.0
species: 539719
type: SpeciesReference

540823
reactant: 743414
product: 743438
type: Reaction
name: homoserine O-succinyltransferase
kinetic law: 743462
reversible: false
product: 743450
reactant: 743426
notes: Abbreviation: R_HSST Synonyms: _0 EC Number: 2.3.1.46 SUBSYSTEM: Methionine Metabolism Equation: [c] : hom-L + succoa --> coa + suchms Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false

542644
value: 0.0
type: LocalParameter

539476
constant: true
size: NaN
spatial dimensions: 3.0
type: Compartment

540934
kinetic law: 746035
product: 746023
reactant: 746011
notes: Abbreviation: R_NACUP Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: nac[e] --> nac[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: false
name: Nicotinic acid uptake
type: Reaction

540034
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Putrescine_C4H14N2
type: Species

542098
value: 0.0
type: LocalParameter

543722
value: 0.0
type: LocalParameter

737243
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543477
value: 0.0
type: LocalParameter

542359
value: 999999.0
type: LocalParameter

753276
stoichiometry: 1.0
species: 539779
type: SpeciesReference

741311
stoichiometry: 1.0
species: 539480
type: SpeciesReference

539526
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Carboxy-4-methyl-2-oxopentanoate_C7H8O5
type: Species

543158
value: 0.0
type: LocalParameter

541955
value: 0.0
type: LocalParameter

540304
reversible: false
product: 732538
fast: false
reactant: 732478
type: Reaction
product: 732526
product: 732514
kinetic law: 732550
reactant: 732490
name: D-alanine-D-alanine ligase
product: 732502
notes: Abbreviation: R_ALAALAr Synonyms: _0 EC Number: 6.3.2.4 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : (2) ala-D + atp --> adp + alaala + h + pi Confidence Level: 2 JLR- added reversible form of ALAALA genes: LOCUS:BPLAN_509#ABBREVIATION:ddlB#ECNUMBERS:6.3.2.4# proteins: NAME:D-alanine-D-alanine ligase A#ABBREVIATION:DdlA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_509)

543960
value: 0.0
type: LocalParameter

541838
value: 0.0
type: LocalParameter

542645
value: 0.0
type: LocalParameter

540035
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Pyridoxamine 5'-phosphate_C8H12N2O5P
type: Species

749043
stoichiometry: 5.0
species: 539926
type: SpeciesReference

542247
value: 0.0
type: LocalParameter

542125
value: 999999.0
type: LocalParameter

540691
kinetic law: 740525
product: 740513
product: 740501
reactant: 740489
notes: Abbreviation: R_FBAb Synonyms: _0 EC Number: 4.1.2.13 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : f1p <==> dhap + glyald Confidence Level: 2 genes: LOCUS:BPLAN_163#ABBREVIATION:fbaA#ECNUMBERS:4.1.2.13# proteins: NAME:fructose-bisphosphate aldolase II#ABBREVIATION:FbaA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_163)
fast: false
reversible: true
name: fructose-bisphosphate aldolaseB
type: Reaction

542880
value: 0.0
type: LocalParameter

739934
stoichiometry: 1.0
species: 540008
type: SpeciesReference

738039
stoichiometry: 1.0
species: 539616
type: SpeciesReference

543157
value: 0.0
type: LocalParameter

749985
stoichiometry: 1.0
species: 539750
type: SpeciesReference

755221
stoichiometry: 1.0
species: 539611
type: SpeciesReference

750640
stoichiometry: 1.0
species: 540021
type: SpeciesReference

742696
stoichiometry: 1.0
species: 539783
type: SpeciesReference

539524
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Carboxy-3-hydroxy-4-methylpentanoate_C7H10O5
type: Species

541958
value: 0.0
type: LocalParameter

543262
value: 0.0
type: LocalParameter

756816
stoichiometry: 1.0
species: 539611
type: SpeciesReference

749550
stoichiometry: 0.14
species: 539789
type: SpeciesReference

539478
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _10-Formyltetrahydrofolate_C20H21N7O7
type: Species

540301
product: 732439
fast: false
notes: Abbreviation: R_AKGt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: akg[e] + h[e] <==> akg[c] + h[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
name: _2-oxoglutarate reversible transport via symport
kinetic law: 732465
type: Reaction
product: 732452
reversible: true
reactant: 732413
reactant: 732426

732526
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540189
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Pyruvate_C3H3O3
type: Species

540036
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Pyridoxal 5'-phosphate_C8H8NO6P
type: Species

542019
value: 0.0
type: LocalParameter

739040
stoichiometry: 1.0
species: 540138
type: SpeciesReference

542244
value: -999999.0
type: LocalParameter

751522
stoichiometry: 1.0
species: 539779
type: SpeciesReference

542124
value: 0.0
type: LocalParameter

543475
value: 999999.0
type: LocalParameter

739498
stoichiometry: 1.0
species: 539784
type: SpeciesReference

541492
value: 0.0
type: LocalParameter

543724
value: 0.0
type: LocalParameter

739149
stoichiometry: 1.0
species: 540142
type: SpeciesReference

541351
reactant: 755209
kinetic law: 755257
product: 755221
name: thymidine kinase (ATP:thymidine)
type: Reaction
product: 755233
reversible: false
product: 755245
notes: Abbreviation: R_TMDK1 Synonyms: _0 EC Number: 2.7.1.21 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + thymd --> adp + dtmp + h Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reactant: 755197

543263
value: 0.0
type: LocalParameter

543962
value: 0.0
type: LocalParameter

542912
value: 0.0
type: LocalParameter

735940
stoichiometry: 1.0
species: 539682
type: SpeciesReference

543155
value: 0.0
type: LocalParameter

735199
stoichiometry: 7.0
species: 539673
type: SpeciesReference

540931
fast: false
kinetic law: 745999
reactant: 745961
notes: Abbreviation: R_NACODA Synonyms: _0 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : acg5sa + h2o --> ac + glu5sa Confidence Level: 0 JLR genes: LOCUS:BPLAN_320#ABBREVIATION:argE#ECNUMBERS:3.5.1.16# proteins: NAME:acetylornithine deacetylase#ABBREVIATION:ArgE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_320)
product: 745987
reactant: 745949
product: 745974
type: Reaction
reversible: false
name: N-acetylornithine deacetylase

540037
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Pyridoxal_C8H9NO3
type: Species

542647
value: 999999.0
type: LocalParameter

539477
constant: true
size: NaN
spatial dimensions: 3.0
type: Compartment

542245
value: 999999.0
type: LocalParameter

542358
value: 0.0
type: LocalParameter

744074
stoichiometry: 1.0
species: 539926
type: SpeciesReference

539747
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Fumarate_C4H2O4
type: Species

742805
stoichiometry: 1.0
species: 539782
type: SpeciesReference

749877
stoichiometry: 1.0
species: 540003
type: SpeciesReference

741651
stoichiometry: 1.0
species: 539757
type: SpeciesReference

543613
value: 0.0
type: LocalParameter

542355
value: 0.0
type: LocalParameter

732007
stoichiometry: 1.0
species: 540013
type: SpeciesReference

542017
value: 999999.0
type: LocalParameter

542094
value: -999999.0
type: LocalParameter

736699
stoichiometry: 1.0
species: 540047
type: SpeciesReference

540259
kinetic law: 731524
product: 731512
reactant: 731500
reactant: 731488
notes: Abbreviation: R_ADK1 Synonyms: _0 EC Number: 2.7.4.3 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : amp + atp <==> (2) adp Confidence Level: 2 Inorganic triphosphate can also act as donor genes: LOCUS:BPLAN_420#ABBREVIATION:adk#ECNUMBERS:2.7.4.3# proteins: NAME:Adenylate kinase#ABBREVIATION:Adk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_420)
fast: false
reversible: true
name: adenylate kinase
type: Reaction

541763
value: 999999.0
type: LocalParameter

540307
kinetic law: 732586
product: 732574
reactant: 732562
notes: Abbreviation: R_ALAR Synonyms: _0 EC Number: 5.1.1.1 SUBSYSTEM: Alanine and Aspartate Metabolism Equation: [c] : ala-L <==> ala-D Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: alanine racemase
type: Reaction

756537
stoichiometry: 1.0
species: 540013
type: SpeciesReference

541558
value: 0.0
type: LocalParameter

742477
stoichiometry: 1.0
species: 539773
type: SpeciesReference

747148
stoichiometry: 1.0
species: 539693
type: SpeciesReference

543048
value: 999999.0
type: LocalParameter

539746
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: D-Fructose_C6H12O6
type: Species

540031
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Phospho-alpha-D-ribose 1-diphosphate_C5H8O14P3
type: Species

543585
value: -999999.0
type: LocalParameter

741469
stoichiometry: 1.0
species: 539770
type: SpeciesReference

543612
value: 0.0
type: LocalParameter

542016
value: 0.0
type: LocalParameter

542356
value: 0.0
type: LocalParameter

540796
kinetic law: 742817
product: 742805
reactant: 742793
notes: Abbreviation: R_H2St1 Synonyms: _0 SUBSYSTEM: Transport Equation: h2s[e] <==> h2s[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: h2s transport (diffusion)
type: Reaction

542095
value: 999999.0
type: LocalParameter

753059
stoichiometry: 1.0
species: 539690
type: SpeciesReference

543370
value: 999999.0
type: LocalParameter

541354
reactant: 755269
product: 755319
reversible: false
type: Reaction
reactant: 755281
product: 755306
notes: Abbreviation: R_TMDPK Synonyms: _0 EC Number: 2.7.6.2 SUBSYSTEM: Thiamine Metabolism Equation: [c] : atp + thm --> amp + h + thmpp Confidence Level: 2 genes: LOCUS:BPLAN_007#ABBREVIATION:thiN#ECNUMBERS:2.7.6.2# proteins: NAME:thiamin pyrophosphokinase 1#ABBREVIATION:ThiN# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_007)
product: 755294
fast: false
kinetic law: 755331
name: thiamine diphosphokinase

733083
stoichiometry: 1.0
species: 539659
type: SpeciesReference

750750
stoichiometry: 1.0
species: 539673
type: SpeciesReference

543615
value: 999999.0
type: LocalParameter

539749
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Glyceraldehyde 3-phosphate_C3H5O6P
type: Species

753857
stoichiometry: 1.0
species: 539520
type: SpeciesReference

748524
stoichiometry: 1.0
species: 539688
type: SpeciesReference

543507
value: 0.0
type: LocalParameter

737327
stoichiometry: 1.0
species: 540083
type: SpeciesReference

542353
value: 999999.0
type: LocalParameter

542128
value: 0.0
type: LocalParameter

542248
value: 0.0
type: LocalParameter

540032
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: phosphatidylserine (Blattabacterium Periplaneta americana)_C1986H3698N50O500P50
type: Species

540793
kinetic law: 742781
product: 742768
reactant: 742756
notes: Abbreviation: R_H2Ot Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h2o[e] <==> h2o[c] Confidence Level: 1 renamed from H20t5 to H2Ot genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: H2O transport via diffusion
type: Reaction

543584
value: 0.0
type: LocalParameter

731705
stoichiometry: 1.0
species: 539783
type: SpeciesReference

541556
value: 0.0
type: LocalParameter

539748
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Fumarate_C4H2O4
type: Species

543046
value: 0.0
type: LocalParameter

543508
value: 0.0
type: LocalParameter

742756
stoichiometry: 1.0
species: 539780
type: SpeciesReference

739257
stoichiometry: 1.0
species: 540145
type: SpeciesReference

540580
kinetic law: 739161
product: 739149
reactant: 739137
notes: Abbreviation: R_EX_fru_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : fru <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: D-Fructose exchange
type: Reaction

734629
stoichiometry: 10.0
species: 539967
type: SpeciesReference

542127
value: 0.0
type: LocalParameter

542014
value: 0.0
type: LocalParameter

542097
value: 0.0
type: LocalParameter

540256
name: _4-amino-4-deoxychorismate synthase
reversible: false
fast: false
notes: Abbreviation: R_ADCS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : chor + gln-L --> 4adcho + glu-L Confidence Level: 2 Not in IUBMB. No EC genes: LOCUS:BPLAN_220#ABBREVIATION:trpE#ECNUMBERS:6.3.5.8# LOCUS:BPLAN_219#ABBREVIATION:trpG#ECNUMBERS:6.3.5.8# proteins: NAME:p-aminobenzoate synthetase, component II#ABBREVIATION:TrpG# NAME:p-aminobenzoate synthetase, component I#ABBREVIATION:TrpE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_220) and (BPLAN_219)
reactant: 731439
product: 731463
product: 731451
type: Reaction
kinetic law: 731475
reactant: 731427

540033
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O-Phospho-L-serine_C3H6NO6P
type: Species

735017
stoichiometry: 1.0
species: 539605
type: SpeciesReference

541555
value: 999999.0
type: LocalParameter

753168
stoichiometry: 1.0
species: 539611
type: SpeciesReference

541762
value: 0.0
type: LocalParameter

543372
value: 0.0
type: LocalParameter

731055
stoichiometry: 1.0
species: 539593
type: SpeciesReference

540715
kinetic law: 741009
product: 740997
reactant: 740985
reactant: 740973
notes: Abbreviation: R_FUM Synonyms: _0 EC Number: 4.2.1.2 SUBSYSTEM: Citric Acid Cycle Equation: [c] : fum + h2o <==> mal-L Confidence Level: 2 genes: LOCUS:BPLAN_105#ABBREVIATION:fumC#ECNUMBERS:4.2.1.2# proteins: NAME:fumarase C#ABBREVIATION:FumC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_105)
fast: false
reversible: true
name: fumarase
type: Reaction

731886
stoichiometry: 2.0
species: 539783
type: SpeciesReference

542013
value: 0.0
type: LocalParameter

746252
stoichiometry: 1.0
species: 539964
type: SpeciesReference

543505
value: 0.0
type: LocalParameter

733820
stoichiometry: 1.0
species: 539611
type: SpeciesReference

543617
value: 0.0
type: LocalParameter

541357
product: 755367
type: Reaction
reactant: 755343
reactant: 755355
fast: false
kinetic law: 755391
name: thymidine phosphorylase
reversible: true
notes: Abbreviation: R_TMDPP Synonyms: _0 EC Number: 2.4.2.4 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : pi + thymd <==> 2dr1p + thym Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 755379

539743
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Farnesyl diphosphate_C15H25O7P2
type: Species

543045
value: 0.0
type: LocalParameter

540718
product: 741046
type: Reaction
kinetic law: 741070
reactant: 741022
fast: false
reactant: 741034
notes: Abbreviation: R_FUMt2_2 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: fum[e] + (2) h[e] --> fum[c] + (2) h[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_282#ABBREVIATION:dctA# proteins: NAME:C4-dicarboxylate transporter#ABBREVIATION:DctA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_282)
reversible: false
name: Fumarate transport via proton symport (2 H)
product: 741058

540799
reversible: true
type: Reaction
product: 742866
reactant: 742829
product: 742854
kinetic law: 742879
name: HCO3 equilibration reaction
reactant: 742842
notes: Abbreviation: R_HCO3E Synonyms: _7 EC Number: 4.2.1.1 SUBSYSTEM: Unassigned Equation: [c] : co2 + h2o <==> h + hco3 Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false

543150
value: 0.0
type: LocalParameter

743111
stoichiometry: 1.0
species: 540013
type: SpeciesReference

735344
stoichiometry: 1.0
species: 539785
type: SpeciesReference

541498
value: 0.0
type: LocalParameter

543589
value: 0.0
type: LocalParameter

543729
value: 0.0
type: LocalParameter

732105
stoichiometry: 1.0
species: 539787
type: SpeciesReference

541768
value: -999999.0
type: LocalParameter

541408
product: 756549
reversible: false
product: 756537
notes: Abbreviation: R_UAMAS Synonyms: _0 EC Number: 6.3.2.8 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : ala-L + atp + uamr --> adp + h + pi + uama Confidence Level: 2 genes: LOCUS:BPLAN_257#ABBREVIATION:murC#ECNUMBERS:6.3.2.8# proteins: NAME:UDP-N-acetylmuramate-alanine ligase#ABBREVIATION:MurC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_257)
reactant: 756477
type: Reaction
product: 756513
kinetic law: 756561
reactant: 756501
fast: false
reactant: 756489
product: 756525
name: UDP-N-acetylmuramoyl-L-alanine synthetase

755799
stoichiometry: 1.0
species: 539749
type: SpeciesReference

539742
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide_C10H13N4O9P
type: Species

732817
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543374
value: 0.0
type: LocalParameter

749117
stoichiometry: 1.0
species: 539622
type: SpeciesReference

542091
value: 0.0
type: LocalParameter

541499
value: 0.0
type: LocalParameter

741397
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542352
value: 0.0
type: LocalParameter

540457
reactant: 736760
type: Reaction
fast: false
product: 736796
reactant: 736772
reversible: true
name: _dCMP deaminase
notes: Abbreviation: R_DCMPDA Synonyms: _1 EC Number: 3.5.4.12 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dcmp + h + h2o <==> dump + nh4 Confidence Level: 2 genes: LOCUS:BPLAN_134#ABBREVIATION:comEB#ECNUMBERS:3.5.4.12# proteins: NAME:dCMP deaminase#ABBREVIATION:ComEB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_134)
kinetic law: 736820
reactant: 736784
product: 736808

542428
value: 0.0
type: LocalParameter

540586
kinetic law: 739233
product: 739221
reactant: 739209
notes: Abbreviation: R_EX_gln_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : gln-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Glutamine exchange
type: Reaction

543503
value: 999999.0
type: LocalParameter

751234
stoichiometry: 1.0
species: 540013
type: SpeciesReference

738787
stoichiometry: 1.0
species: 540131
type: SpeciesReference

738147
stoichiometry: 1.0
species: 539677
type: SpeciesReference

737171
stoichiometry: 1.0
species: 539967
type: SpeciesReference

543619
value: 0.0
type: LocalParameter

746893
stoichiometry: 1.0
species: 539659
type: SpeciesReference

746954
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543375
value: 0.0
type: LocalParameter

740513
stoichiometry: 1.0
species: 539764
type: SpeciesReference

543043
value: 0.0
type: LocalParameter

754608
stoichiometry: 1.0
species: 540013
type: SpeciesReference

541132
reactant: 750375
product: 750399
reactant: 750387
type: Reaction
product: 750411
name: pyrimidine phosphatase
kinetic law: 750423
fast: false
notes: Abbreviation: R_PMDPHT Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 5aprbu + h2o --> 4r5au + pi Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reversible: false

542011
value: 999999.0
type: LocalParameter

540454
kinetic law: 736748
reactant: 736699
name: _3,4-Dihydroxy-2-butanone-4-phosphate synthase
type: Reaction
product: 736736
product: 736724
reversible: false
notes: Abbreviation: R_DB4PS Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : ru5p-D --> db4p + for + h Confidence Level: 2 No EC number: ribA in B. subtilis catalyzes two reactions (GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase) genes: LOCUS:BPLAN_317#ABBREVIATION:ribBA#ECNUMBERS:3.5.4.25,-!-,4.1.99.12# proteins: NAME:_bifunctional 3,4 dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II#ABBREVIATION:RibBA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_317)
product: 736712
fast: false

541765
value: 0.0
type: LocalParameter

736832
stoichiometry: 1.0
species: 539696
type: SpeciesReference

748978
stoichiometry: 1.0
species: 539669
type: SpeciesReference

542427
value: 0.0
type: LocalParameter

540583
kinetic law: 739197
product: 739185
reactant: 739173
notes: Abbreviation: R_EX_fum_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : fum <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Fumarate exchange
type: Reaction

540253
product: 731391
fast: false
product: 731403
name: _4-aminobenzoate synthase
notes: Abbreviation: R_ADCL Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 4adcho <==> 4abz + h + pyr Confidence Level: 2 Not in IUBMB. No EC EC: 4.1.3.38 IT genes: LOCUS:BPLAN_185#ABBREVIATION:ilvE#ECNUMBERS:4.1.3.38# proteins: NAME:Aminodeoxychorismate lyase#ABBREVIATION:IlvE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_185)
type: Reaction
reactant: 731367
product: 731379
kinetic law: 731415
reversible: true

542092
value: 0.0
type: LocalParameter

755161
stoichiometry: 1.0
species: 539730
type: SpeciesReference

750289
stoichiometry: 1.0
species: 540011
type: SpeciesReference

543587
value: 999999.0
type: LocalParameter

541051
reactant: 748574
product: 748610
type: Reaction
reactant: 748586
fast: false
name: Nucleoside triphosphate pyrophosphorylase (atp)
product: 748598
notes: Abbreviation: R_NTPP6 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + h2o --> amp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
kinetic law: 748634
reversible: false
product: 748622

756683
stoichiometry: 1.0
species: 540013
type: SpeciesReference

749768
stoichiometry: 1.0
species: 540036
type: SpeciesReference

757226
stoichiometry: 1.0
species: 540119
type: SpeciesReference

541559
value: -999999.0
type: LocalParameter

539744
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Fructose_C6H12O6
type: Species

740948
stoichiometry: 1.0
species: 540013
type: SpeciesReference

734122
stoichiometry: 45.5608
species: 539779
type: SpeciesReference

542010
value: -999999.0
type: LocalParameter

733361
stoichiometry: 1.0
species: 539669
type: SpeciesReference

541766
value: 0.0
type: LocalParameter

542350
value: 0.0
type: LocalParameter

539764
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Glyceraldehyde_C3H6O3
type: Species

741895
stoichiometry: 1.0
species: 540022
type: SpeciesReference

542502
value: 0.0
type: LocalParameter

542446
value: 0.0
type: LocalParameter

539698
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dGDP_C10H12N5O10P2
type: Species

540451
fast: false
product: 736675
notes: Abbreviation: R_DASYN_Pam Synonyms: _0 EC Number: 2.7.7.41 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : ctp + h + (0.02) pa_Pam --> (0.02) cdpdag_Pam + ppi Confidence Level: 2 tv genes: LOCUS:BPLAN_412#ABBREVIATION:cdsA#ECNUMBERS:2.7.7.41# proteins: NAME:CDP-diglyceride synthetase#ABBREVIATION:CdsA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_412)
product: 736663
type: Reaction
kinetic law: 736687
reactant: 736639
reactant: 736627
name: CDP-Diacylglycerol synthetase
reactant: 736651
reversible: false

746809
stoichiometry: 1.0
species: 539776
type: SpeciesReference

745840
stoichiometry: 1.0
species: 539948
type: SpeciesReference

748101
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543813
value: 0.0
type: LocalParameter

539987
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: all-trans-Octaprenyl diphosphate_C40H65O7P2
type: Species

543500
value: 0.0
type: LocalParameter

734835
stoichiometry: 5.0
species: 539673
type: SpeciesReference

756042
stoichiometry: 1.0
species: 540106
type: SpeciesReference

748744
stoichiometry: 1.0
species: 539783
type: SpeciesReference

733349
stoichiometry: 1.0
species: 539659
type: SpeciesReference

542591
value: 0.0
type: LocalParameter

543368
value: 0.0
type: LocalParameter

539607
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Adenine_C5H5N5
type: Species

737547
stoichiometry: 1.0
species: 539753
type: SpeciesReference

539697
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dodecanoyl-ACP (n-C12:0ACP)_C23H43N2O8PRS
type: Species

541066
kinetic law: 748938
product: 748926
reactant: 748914
notes: Abbreviation: R_O2t Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: o2[e] <==> o2[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: o2 transport (diffusion)
type: Reaction

748173
stoichiometry: 1.0
species: 539774
type: SpeciesReference

541604
value: 0.0
type: LocalParameter

754437
stoichiometry: 1.0
species: 539731
type: SpeciesReference

750907
stoichiometry: 1.0
species: 539671
type: SpeciesReference

731935
stoichiometry: 1.0
species: 539779
type: SpeciesReference

541572
value: 999999.0
type: LocalParameter

541339
kinetic law: 755005
product: 754993
product: 754981
reactant: 754969
notes: Abbreviation: R_THRD_L Synonyms: _1 EC Number: 4.3.1.19 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : thr-L --> 2obut + nh4 Confidence Level: 2 Previous EC number: 4.2.1.16. New EC number 4.3.1.19. Can't enter this.... genes: LOCUS:BPLAN_087#ABBREVIATION:ilvA#ECNUMBERS:4.3.1.19# proteins: NAME:threonine deaminase#ABBREVIATION:IlvA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_087)
fast: false
reversible: false
name: L-threonine deaminase
type: Reaction

747366
stoichiometry: 1.0
species: 539783
type: SpeciesReference

746300
stoichiometry: 1.0
species: 539966
type: SpeciesReference

539986
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Oxaloacetate_C4H2O5
type: Species

737691
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543367
value: 0.0
type: LocalParameter

746095
stoichiometry: 1.0
species: 539974
type: SpeciesReference

744789
stoichiometry: 1.0
species: 539744
type: SpeciesReference

739028
stoichiometry: 1.0
species: 539709
type: SpeciesReference

753796
stoichiometry: 1.0
species: 540059
type: SpeciesReference

730557
stoichiometry: 1.0
species: 539659
type: SpeciesReference

539762
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Glycine_C2H5NO2
type: Species

543811
value: 999999.0
type: LocalParameter

542500
value: 0.0
type: LocalParameter

542448
value: -999999.0
type: LocalParameter

541607
value: 999999.0
type: LocalParameter

541069
notes: Abbreviation: R_OCBT Synonyms: _0 EC Number: 2.1.3.3 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : cbp + orn --> citr-L + h + pi Confidence Level: 2 genes: LOCUS:BPLAN_322#ABBREVIATION:argF#ECNUMBERS:2.1.3.3# proteins: NAME:Ornithine carbamoyl transferase II#ABBREVIATION:ArgF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_322)
product: 748991
reactant: 748965
product: 749004
reactant: 748951
name: ornithine carbamoyltransferase
kinetic law: 749017
fast: false
product: 748978
type: Reaction
reversible: false

542020
value: 0.0
type: LocalParameter

541573
value: 0.0
type: LocalParameter

750094
stoichiometry: 1.0
species: 539540
type: SpeciesReference

750532
stoichiometry: 1.0
species: 539611
type: SpeciesReference

753396
stoichiometry: 1.0
species: 540111
type: SpeciesReference

750628
stoichiometry: 1.0
species: 539779
type: SpeciesReference

737039
stoichiometry: 1.0
species: 539486
type: SpeciesReference

542593
value: 999999.0
type: LocalParameter

539605
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Acetoacetyl-ACP_C15H25N2O9PRS
type: Species

540508
kinetic law: 737900
product: 737887
product: 737874
reactant: 737861
notes: Abbreviation: R_DHQS Synonyms: _0 EC Number: 4.2.3.4 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 2dda7p --> 3dhq + pi Confidence Level: 2 Previously EC 4.6.1.3. now EC 4.2.3.4, 3-dehydroquinate synthase genes: LOCUS:BPLAN_146#ABBREVIATION:aroB#ECNUMBERS:4.6.1.3# proteins: NAME:_3-dehydroquinate synthase#ABBREVIATION:AroB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_146)
fast: false
reversible: false
name: _3-dehydroquinate synthase
type: Reaction

539763
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Glycine_C2H5NO2
type: Species

539699
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dGMP_C10H12N5O7P
type: Species

541606
value: -999999.0
type: LocalParameter

742295
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540589
kinetic law: 739269
product: 739257
reactant: 739245
notes: Abbreviation: R_EX_glu_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : glu-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Glutamate exchange
type: Reaction

747824
stoichiometry: 1.0
species: 540013
type: SpeciesReference

542449
value: 999999.0
type: LocalParameter

754812
stoichiometry: 1.0
species: 539611
type: SpeciesReference

734049
stoichiometry: 0.036
species: 539720
type: SpeciesReference

543501
value: 0.0
type: LocalParameter

734314
stoichiometry: 0.205
species: 540056
type: SpeciesReference

750155
stoichiometry: 1.0
species: 539518
type: SpeciesReference

739861
stoichiometry: 1.0
species: 539972
type: SpeciesReference

741518
stoichiometry: 1.0
species: 539730
type: SpeciesReference

543365
value: 0.0
type: LocalParameter

542594
value: 0.0
type: LocalParameter

734945
stoichiometry: 6.0
species: 539601
type: SpeciesReference

755367
stoichiometry: 1.0
species: 539508
type: SpeciesReference

541601
value: 999999.0
type: LocalParameter

733131
stoichiometry: 1.0
species: 539783
type: SpeciesReference

743086
stoichiometry: 1.0
species: 539792
type: SpeciesReference

543591
value: 0.0
type: LocalParameter

754559
stoichiometry: 1.0
species: 539659
type: SpeciesReference

541575
value: 0.0
type: LocalParameter

542506
value: 0.0
type: LocalParameter

751390
stoichiometry: 1.0
species: 540024
type: SpeciesReference

742066
stoichiometry: 1.0
species: 539964
type: SpeciesReference

743540
stoichiometry: 1.0
species: 539667
type: SpeciesReference

539760
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Glutamate_C5H8NO4
type: Species

542442
value: -999999.0
type: LocalParameter

748598
stoichiometry: 1.0
species: 539638
type: SpeciesReference

543038
value: 0.0
type: LocalParameter

753180
stoichiometry: 1.0
species: 540093
type: SpeciesReference

737836
stoichiometry: 1.0
species: 539779
type: SpeciesReference

744679
stoichiometry: 1.0
species: 539697
type: SpeciesReference

543610
value: 0.0
type: LocalParameter

541576
value: -999999.0
type: LocalParameter

541600
value: 0.0
type: LocalParameter

542849
value: 999999.0
type: LocalParameter

543592
value: -999999.0
type: LocalParameter

753312
stoichiometry: 1.0
species: 539663
type: SpeciesReference

542505
value: 0.0
type: LocalParameter

746724
stoichiometry: 1.0
species: 539958
type: SpeciesReference

539919
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-(Imidazol-4-yl)-2-oxopropyl phosphate_C6H7N2O5P
type: Species

539761
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Glutamate_C5H8NO4
type: Species

540724
name: glycerol-3-phosphate dehydrogenase (ubiquinone-8)
product: 741190
notes: Abbreviation: R_G3PD5 Synonyms: _0 EC Number: 1.1.5.3 SUBSYSTEM: Oxidative Phosphorylation Equation: [c] : glyc3p + mqn8 <==> dhap + mql8 Confidence Level: 2 JLR genes: LOCUS:BPLAN_182#ABBREVIATION:glpD#ECNUMBERS:1.1.5.3# proteins: NAME:glycerol-3-phosphate dehydrogenase#ABBREVIATION:GlpD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_182)
kinetic law: 741202
reversible: true
reactant: 741166
fast: false
product: 741178
type: Reaction
reactant: 741154

542596
value: 0.0
type: LocalParameter

542443
value: 999999.0
type: LocalParameter

543039
value: 0.0
type: LocalParameter

744813
stoichiometry: 1.0
species: 539729
type: SpeciesReference

757177
stoichiometry: 1.0
species: 539611
type: SpeciesReference

751886
stoichiometry: 1.0
species: 540005
type: SpeciesReference

750955
stoichiometry: 1.0
species: 539964
type: SpeciesReference

752044
stoichiometry: 1.0
species: 540033
type: SpeciesReference

751764
stoichiometry: 1.0
species: 540029
type: SpeciesReference

539989
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Oxo-3-hydroxy-4-phosphobutanoate_C4H4O8P
type: Species

741919
stoichiometry: 1.0
species: 539759
type: SpeciesReference

540721
kinetic law: 741142
product: 741130
fast: false
reactant: 741082
product: 741106
reactant: 741094
notes: Abbreviation: R_G1PACT Synonyms: _0 EC Number: 2.3.1.157 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : accoa + gam1p --> acgam1p + coa + h Confidence Level: 2 genes: LOCUS:BPLAN_036#ABBREVIATION:galU#ECNUMBERS:2.7.7.23# proteins: NAME:UTP-glucose-1-phosphate uridylyltransferase#ABBREVIATION:galU# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_036)
name: glucosamine-1-phosphate N-acetyltransferase
type: Reaction
product: 741118
reversible: false

542846
value: 0.0
type: LocalParameter

541760
value: 0.0
type: LocalParameter

732961
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542597
value: 0.0
type: LocalParameter

541603
value: 0.0
type: LocalParameter

744279
stoichiometry: 1.0
species: 539536
type: SpeciesReference

539609
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Adenosine_C10H13N5O4
type: Species

753930
stoichiometry: 1.0
species: 540038
type: SpeciesReference

732335
stoichiometry: 1.0
species: 539677
type: SpeciesReference

747475
stoichiometry: 1.0
species: 540021
type: SpeciesReference

736230
stoichiometry: 1.0
species: 539671
type: SpeciesReference

752695
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543594
value: 999999.0
type: LocalParameter

539988
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: cis-octadec-11-enoyl-[acyl-carrier protein] (n-C18:1)_C29H53N2O8PRS
type: Species

543690
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type: LocalParameter

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species: 539490
type: SpeciesReference

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initial concentration: NaN
initial amount: NaN
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name: L-Isoleucine_C6H13NO2
type: Species

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type: LocalParameter

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species: 539601
type: SpeciesReference

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species: 539609
type: SpeciesReference

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species: 539611
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species: 539714
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species: 540013
type: SpeciesReference

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species: 539939
type: SpeciesReference

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species: 540127
type: SpeciesReference

542599
value: 999999.0
type: LocalParameter

541276
product: 753554
reactant: 753529
kinetic law: 753578
type: Reaction
product: 753566
fast: false
name: succinyl-diaminopimelate desuccinylase
reversible: false
reactant: 753542
notes: Abbreviation: R_SDPDS Synonyms: _0 EC Number: 3.5.1.18 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : h2o + sl26da --> 26dap-LL + succ Confidence Level: 2 genes: LOCUS:BPLAN_320#ABBREVIATION:dapE#ECNUMBERS:3.5.1.18# proteins: NAME:Succinyl-diaminopimelate desuccinylase#ABBREVIATION:DapE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_320)

539545
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-Aminobenzoate_C7H6NO2
type: Species

540832
product: 743613
reactant: 743576
product: 743600
product: 743637
fast: false
notes: Abbreviation: R_IG3PS Synonyms: _0 SUBSYSTEM: Histidine Metabolism Equation: [c] : gln-L + prlp --> aicar + eig3p + glu-L + h Confidence Level: 2 Essential in L-histidine synthesis: No definite EC number assigned: EC 2.4.2.-; HisF cyclase genes: LOCUS:BPLAN_203#ABBREVIATION:hisH#ECNUMBERS:2.4.2.-# LOCUS:BPLAN_201#ABBREVIATION:hisF#ECNUMBERS:2.4.2.-# proteins: NAME:Imadazoleglycerol phosphate synthase#ABBREVIATION:HisF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_203 and BPLAN_201)
name: Imidazole-glycerol-3-phosphate synthase
type: Reaction
reactant: 743588
kinetic law: 743649
reversible: false
product: 743625

542928
value: 999999.0
type: LocalParameter

542844
value: 0.0
type: LocalParameter

733240
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species: 539779
type: SpeciesReference

744461
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species: 539969
type: SpeciesReference

543482
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type: LocalParameter

754668
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species: 539727
type: SpeciesReference

539690
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3,4-dihydroxy-2-butanone 4-phosphate_C4H7O6P
type: Species

747764
stoichiometry: 1.0
species: 540119
type: SpeciesReference

543720
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type: LocalParameter

743438
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species: 539677
type: SpeciesReference

737763
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species: 539711
type: SpeciesReference

543148
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740610
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species: 539736
type: SpeciesReference

541825
value: 0.0
type: LocalParameter

542867
value: 999999.0
type: LocalParameter

540940
fast: false
reactant: 746131
kinetic law: 746180
reversible: false
reactant: 746143
type: Reaction
notes: Abbreviation: R_NADH10 Synonyms: _0 EC Number: 1.6.5.3 SUBSYSTEM: Oxidative Phosphorylation Equation: [c] : h + mqn8 + nadh --> mql8 + nad Confidence Level: 2 JLR genes: LOCUS:BPLAN_442#ABBREVIATION:ndh#ECNUMBERS:1.16.1.-,-!-,1.6.99.3# proteins: NAME:NADH dehydrogenase II#ABBREVIATION:Ndh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_442)
product: 746155
name: NADH dehydrogenase (menaquinone-8 & 0 protons)
reactant: 746119
product: 746167

543965
value: 999999.0
type: LocalParameter

745647
stoichiometry: 1.0
species: 539945
type: SpeciesReference

542666
value: 0.0
type: LocalParameter

539544
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-O-(1-Carboxyvinyl)-3-phosphoshikimate_C10H9O10P
type: Species

736942
stoichiometry: 1.0
species: 539502
type: SpeciesReference

542509
value: 999999.0
type: LocalParameter

731223
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species: 539609
type: SpeciesReference

749418
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species: 539783
type: SpeciesReference

746664
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species: 539973
type: SpeciesReference

747584
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species: 540013
type: SpeciesReference

739620
stoichiometry: 1.0
species: 540156
type: SpeciesReference

733577
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species: 539653
type: SpeciesReference

741178
stoichiometry: 1.0
species: 539702
type: SpeciesReference

752346
stoichiometry: 1.0
species: 540013
type: SpeciesReference

542440
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type: LocalParameter

542665
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type: LocalParameter

542868
value: 0.0
type: LocalParameter

541822
value: 0.0
type: LocalParameter

541420
reactant: 756780
kinetic law: 756864
type: Reaction
product: 756828
product: 756840
reactant: 756792
fast: false
product: 756852
reversible: false
product: 756816
reactant: 756804
name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase
notes: Abbreviation: R_UGMDDS Synonyms: _0 EC Number: 6.3.2.15 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : alaala + atp + ugmd --> adp + h + pi + ugmda Confidence Level: 2 genes: LOCUS:BPLAN_535#ABBREVIATION:murF#ECNUMBERS:6.3.2.10# proteins: NAME:D-alanine:D-alanine-adding enzme#ABBREVIATION:MurF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_535)

543484
value: 0.0
type: LocalParameter

542508
value: 0.0
type: LocalParameter

752334
stoichiometry: 1.0
species: 539686
type: SpeciesReference

736000
stoichiometry: 1.0
species: 539787
type: SpeciesReference

542843
value: 999999.0
type: LocalParameter

542929
value: 0.0
type: LocalParameter

539546
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-amino-4-deoxychorismate_C10H10NO5
type: Species

738919
stoichiometry: 1.0
species: 539655
type: SpeciesReference

731500
stoichiometry: 1.0
species: 539659
type: SpeciesReference

751040
stoichiometry: 1.0
species: 540019
type: SpeciesReference

541823
value: 999999.0
type: LocalParameter

543963
value: -999999.0
type: LocalParameter

752274
stoichiometry: 1.0
species: 539609
type: SpeciesReference

730801
stoichiometry: 1.0
species: 540038
type: SpeciesReference

541279
type: Reaction
reactant: 753590
notes: Abbreviation: R_SDPTA Synonyms: _0 EC Number: 2.6.1.17 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : akg + sl26da <==> glu-L + sl2a6o Confidence Level: 2 genes: LOCUS:BPLAN_012#ABBREVIATION:dapC#ECNUMBERS:2.6.1.11,-!-,2.6.1.17# proteins: NAME:bifunctional acetylornithine transaminase/N-succinyldiaminopimelate aminotransferase#ABBREVIATION:DapC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_012)
fast: false
reactant: 753602
kinetic law: 753638
product: 753614
reversible: true
product: 753626
name: succinyldiaminopimelate transaminase

539691
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N6-(1,2-Dicarboxyethyl)-AMP_C14H14N5O11P
type: Species

734266
stoichiometry: 0.176
species: 540007
type: SpeciesReference

731367
stoichiometry: 1.0
species: 539546
type: SpeciesReference

543818
value: 999999.0
type: LocalParameter

539603
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O-Acetyl-L-serine_C5H9NO4
type: Species

744606
stoichiometry: 1.0
species: 539783
type: SpeciesReference

746456
stoichiometry: 1.0
species: 539611
type: SpeciesReference

752987
stoichiometry: 1.0
species: 540044
type: SpeciesReference

747256
stoichiometry: 1.0
species: 539659
type: SpeciesReference

732684
stoichiometry: 1.0
species: 539760
type: SpeciesReference

542862
value: 0.0
type: LocalParameter

745731
stoichiometry: 2.0
species: 539783
type: SpeciesReference

541820
value: 0.0
type: LocalParameter

540697
fast: false
product: 740670
product: 740658
reversible: false
product: 740634
notes: Abbreviation: R_FE2abc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + fe2[e] + h2o[c] --> adp[c] + fe2[c] + h[c] + pi[c] Confidence Level: 2 genes: LOCUS:BPLAN_508#ABBREVIATION:feoB# proteins: NAME:Iron(II) transport protein#ABBREVIATION:FeoB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_508)
type: Reaction
reactant: 740622
name: iron (II) transport via ABC system
product: 740646
reactant: 740597
reactant: 740610
kinetic law: 740682

540111
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: UDP_C9H11N2O12P2
type: Species

542663
value: 0.0
type: LocalParameter

542840
value: 0.0
type: LocalParameter

539694
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dCMP_C9H12N3O7P
type: Species

743794
stoichiometry: 1.0
species: 539779
type: SpeciesReference

754329
stoichiometry: 1.0
species: 539520
type: SpeciesReference

740309
stoichiometry: 1.0
species: 540204
type: SpeciesReference

541273
kinetic law: 753516
product: 753504
reactant: 753492
notes: Abbreviation: R_RPI Synonyms: _0 EC Number: 5.3.1.6 SUBSYSTEM: Pentose Phosphate Pathway Equation: [c] : r5p <==> ru5p-D Confidence Level: 2 SMP genes: LOCUS:BPLAN_345#ABBREVIATION:rpiB#ECNUMBERS:5.3.1.6,-!-,5.3.1.-# proteins: NAME:ribose-5-phosphate isomerase B#ABBREVIATION:RpiB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_345)
fast: false
reversible: true
name: ribose-5-phosphate isomerase
type: Reaction

543258
value: 999999.0
type: LocalParameter

744898
stoichiometry: 1.0
species: 539929
type: SpeciesReference

544007
value: 999999.0
type: LocalParameter

754062
stoichiometry: 1.0
species: 539611
type: SpeciesReference

740189
stoichiometry: 1.0
species: 540077
type: SpeciesReference

750738
stoichiometry: 1.0
species: 539783
type: SpeciesReference

734727
stoichiometry: 6.0
species: 539779
type: SpeciesReference

746468
stoichiometry: 1.0
species: 539783
type: SpeciesReference

733457
stoichiometry: 1.0
species: 539969
type: SpeciesReference

539480
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Phospho-D-glyceroyl phosphate_C3H4O10P2
type: Species

732756
stoichiometry: 1.0
species: 540038
type: SpeciesReference

746518
stoichiometry: 1.0
species: 539716
type: SpeciesReference

540112
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
type: Species

543816
value: -999999.0
type: LocalParameter

756248
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543969
value: 0.0
type: LocalParameter

539693
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dCDP_C9H12N3O10P2
type: Species

542662
value: 0.0
type: LocalParameter

539540
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Phospho-D-glycerate_C3H4O7P
type: Species

749261
stoichiometry: 1.0
species: 539673
type: SpeciesReference

755679
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species: 539749
type: SpeciesReference

540619
kinetic law: 739632
product: 739620
reactant: 739608
notes: Abbreviation: R_EX_k_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : k <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: K+ exchange
type: Reaction

730667
stoichiometry: 1.0
species: 539592
type: SpeciesReference

756972
stoichiometry: 1.0
species: 540111
type: SpeciesReference

542841
value: -999999.0
type: LocalParameter

757021
stoichiometry: 1.0
species: 540115
type: SpeciesReference

746011
stoichiometry: 1.0
species: 539963
type: SpeciesReference

540192
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Serine_C3H7NO3
type: Species

751654
stoichiometry: 1.0
species: 539741
type: SpeciesReference

542864
value: 0.0
type: LocalParameter

754884
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543815
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type: LocalParameter

540113
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
type: Species

543480
value: 0.0
type: LocalParameter

539601
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: acyl carrier protein_C11H21N2O7PRS
type: Species

540616
kinetic law: 739595
product: 739583
reactant: 739571
notes: Abbreviation: R_EX_ile_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : ile-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Isoleucine exchange
type: Reaction

539696
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Deoxycytidine_C9H13N3O4
type: Species

544009
value: 0.0
type: LocalParameter

751318
stoichiometry: 1.0
species: 539611
type: SpeciesReference

542660
value: 0.0
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543256
value: 0.0
type: LocalParameter

736085
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species: 539784
type: SpeciesReference

737460
stoichiometry: 1.0
species: 539504
type: SpeciesReference

541570
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type: LocalParameter

542130
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type: LocalParameter

543967
value: 0.0
type: LocalParameter

542865
value: -999999.0
type: LocalParameter

539482
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _1-Pyrroline-5-carboxylate_C5H6NO2
type: Species

754921
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species: 539783
type: SpeciesReference

734592
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species: 539673
type: SpeciesReference

540114
constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: UMP_C9H11N2O9P
type: Species

539542
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Phosphohydroxypyruvate_C3H2O7P
type: Species

539695
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dCTP_C9H12N3O13P3
type: Species

741022
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species: 539748
type: SpeciesReference

755703
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species: 540094
type: SpeciesReference

756756
stoichiometry: 1.0
species: 540108
type: SpeciesReference

541757
value: 999999.0
type: LocalParameter

541966
value: -999999.0
type: LocalParameter

733917
stoichiometry: 0.001
species: 539638
type: SpeciesReference

539484
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2,3-Dihydrodipicolinate_C7H5NO4
type: Species

542871
value: 0.0
type: LocalParameter

540104
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
type: Species

738568
stoichiometry: 1.0
species: 539673
type: SpeciesReference

750387
stoichiometry: 1.0
species: 539779
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542349
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744922
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species: 539659
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species: 539677
type: SpeciesReference

543970
value: 0.0
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742175
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species: 539770
type: SpeciesReference

544002
value: 0.0
type: LocalParameter

752551
stoichiometry: 1.0
species: 540040
type: SpeciesReference

541123
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reactant: 750191
type: Reaction
reactant: 750203
name: L-phenylalanine reversible transport via proton symport
reversible: true
product: 750227
product: 750215
notes: Abbreviation: R_PHEt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + phe-L[e] <==> h[c] + phe-L[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 750239

541965
value: 0.0
type: LocalParameter

740827
stoichiometry: 1.0
species: 539740
type: SpeciesReference

743195
stoichiometry: 1.0
species: 539580
type: SpeciesReference

754704
stoichiometry: 1.0
species: 539779
type: SpeciesReference

542131
value: 0.0
type: LocalParameter

540198
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Thiamin_C12H17N4OS
type: Species

542870
value: 0.0
type: LocalParameter

541414
product: 756696
name: undecaprenyl-diphosphatase
reactant: 756658
reversible: false
kinetic law: 756708
reactant: 756645
fast: false
type: Reaction
notes: Abbreviation: R_UDCPDP Synonyms: _0 EC Number: 3.6.1.27 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : h2o + udcpdp --> h + pi + udcpp Confidence Level: 2 genes: LOCUS:BPLAN_278#ABBREVIATION:uppP#ECNUMBERS:3.6.1.27# proteins: NAME:undecaprenyl-diphosphatase#ABBREVIATION:UppP# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_278)
product: 756683
product: 756670

540103
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
type: Species

753204
stoichiometry: 1.0
species: 539779
type: SpeciesReference

752406
stoichiometry: 1.0
species: 540013
type: SpeciesReference

747981
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543715
value: 0.0
type: LocalParameter

543255
value: 0.0
type: LocalParameter

749913
stoichiometry: 1.0
species: 539554
type: SpeciesReference

539486
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (R)-2,3-Dihydroxy-3-methylbutanoate_C5H9O4
type: Species

540613
kinetic law: 739559
product: 739547
reactant: 739535
notes: Abbreviation: R_EX_his_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : his-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Histidine exchange
type: Reaction

541759
value: 0.0
type: LocalParameter

541126
reactant: 750252
name: phenylalanine transaminase
kinetic law: 750302
reactant: 750264
fast: false
reversible: true
notes: Abbreviation: R_PHETA1 Synonyms: _5 EC Number: 2.6.1.58 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : akg + phe-L <==> glu-L + phpyr Confidence Level: 2 genes: LOCUS:BPLAN_285#ABBREVIATION:aspC#ECNUMBERS:2.6.1.1# LOCUS:BPLAN_185#ABBREVIATION:ilvE#ECNUMBERS:2.6.1.42,-!-,2.6.1.2# LOCUS:BPLAN_298#ABBREVIATION:tyrB#ECNUMBERS:2.6.1.57# proteins: NAME:Tyrosine aminotransferase#ABBREVIATION:TyrB# NAME:Branched-chain-amino-acid aminotransferase#ABBREVIATION:IlvE# NAME:aspartate aminotransferase#ABBREVIATION:AspC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_185) or (BPLAN_298) or (BPLAN_285)
type: Reaction
product: 750289
product: 750276

541417
kinetic law: 756768
reactant: 756720
reactant: 756732
name: Undecaprenyl diphosphate synthase
notes: Abbreviation: R_UDCPDPS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : frdp + (8) ipdp --> (8) ppi + udcpdp Confidence Level: 2 tv genes: LOCUS:BPLAN_547#ABBREVIATION:ispU#ECNUMBERS:2.5.1.31# proteins: NAME:Undecaprenyl diphosphate synthase#ABBREVIATION:UppS# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_547)
product: 756756
product: 756744
type: Reaction
fast: false
reversible: false

540106
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
type: Species

542230
value: 0.0
type: LocalParameter

734471
stoichiometry: 1.0
species: 539779
type: SpeciesReference

751186
stoichiometry: 1.0
species: 540022
type: SpeciesReference

542873
value: 999999.0
type: LocalParameter

735223
stoichiometry: 15.0
species: 539967
type: SpeciesReference

542921
value: 999999.0
type: LocalParameter

540195
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Succinate_C4H4O4
type: Species

542134
value: 0.0
type: LocalParameter

745093
stoichiometry: 1.0
species: 539779
type: SpeciesReference

738496
stoichiometry: 1.0
species: 539783
type: SpeciesReference

544005
value: 0.0
type: LocalParameter

755895
stoichiometry: 1.0
species: 539784
type: SpeciesReference

732225
stoichiometry: 1.0
species: 539568
type: SpeciesReference

543141
value: 0.0
type: LocalParameter

752491
stoichiometry: 1.0
species: 539777
type: SpeciesReference

540838
product: 743757
reactant: 743721
name: indole-3-glycerol-phosphate synthase
kinetic law: 743769
notes: Abbreviation: R_IGPS Synonyms: _0 EC Number: 4.1.1.48 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 2cpr5p + h --> 3ig3p + co2 + h2o Confidence Level: 2 genes: LOCUS:BPLAN_217#ABBREVIATION:trpC#ECNUMBERS:4.1.1.48# proteins: NAME:Indole-3-glycerol phosphate synthase#ABBREVIATION:TrpC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_217)
product: 743745
type: Reaction
product: 743733
fast: false
reversible: false
reactant: 743709

733795
stoichiometry: 1.0
species: 540025
type: SpeciesReference

543253
value: 0.0
type: LocalParameter

540105
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
type: Species

740718
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540949
kinetic law: 746420
name: NADH dehydrogenase (demethylmenaquinone-8 & 0 protons)
fast: false
type: Reaction
notes: Abbreviation: R_NADH9 Synonyms: _0 EC Number: 1.6.5.3 SUBSYSTEM: Oxidative Phosphorylation Equation: [c] : 2dmmq8 + h + nadh --> 2dmmql8 + nad Confidence Level: 2 JLR genes: LOCUS:BPLAN_442#ABBREVIATION:ndh#ECNUMBERS:1.16.1.-,-!-,1.6.99.3# proteins: NAME:NADH dehydrogenase II#ABBREVIATION:Ndh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_442)
reactant: 746372
reversible: false
reactant: 746384
product: 746396
product: 746408
reactant: 746360

541963
value: 0.0
type: LocalParameter

543713
value: 999999.0
type: LocalParameter

736736
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542133
value: 0.0
type: LocalParameter

739402
stoichiometry: 1.0
species: 540150
type: SpeciesReference

540262
product: 731573
type: Reaction
reactant: 731537
fast: false
notes: Abbreviation: R_ADK3 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : amp + gtp <==> adp + gdp Confidence Level: 2 JLR genes: LOCUS:BPLAN_420#ABBREVIATION:adk#ECNUMBERS:2.7.4.3# proteins: NAME:Adenylate kinase#ABBREVIATION:Adk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_420)
kinetic law: 731585
reversible: true
name: adentylate kinase (GTP)
product: 731561
reactant: 731549

543608
value: 999999.0
type: LocalParameter

544004
value: 0.0
type: LocalParameter

541270
kinetic law: 753480
product: 753468
reactant: 753456
notes: Abbreviation: R_RPE Synonyms: _0 EC Number: 5.1.3.1 SUBSYSTEM: Pentose Phosphate Pathway Equation: [c] : ru5p-D <==> xu5p-D Confidence Level: 2 SMP genes: LOCUS:BPLAN_293#ABBREVIATION:rpe#ECNUMBERS:5.1.3.1# proteins: NAME:D-ribulose-5-phosphate 3-epimerase#ABBREVIATION:Rpe# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_293)
fast: false
reversible: true
name: ribulose 5-phosphate 3-epimerase
type: Reaction

732538
stoichiometry: 1.0
species: 540013
type: SpeciesReference

756828
stoichiometry: 1.0
species: 539783
type: SpeciesReference

749056
stoichiometry: 1.0
species: 539987
type: SpeciesReference

541411
notes: Abbreviation: R_UAPGR Synonyms: _0 EC Number: 1.1.1.158 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : h + nadph + uaccg --> nadp + uamr Confidence Level: 2 genes: LOCUS:BPLAN_266#ABBREVIATION:murB#ECNUMBERS:1.1.1.158# proteins: NAME:UDP-N-acetylenolpyruvoylglycosamine reductase#ABBREVIATION:MurB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_266)
reversible: false
product: 756609
fast: false
kinetic law: 756633
product: 756621
name: UDP-N-acetylenolpyruvoylglucosamine reductase
reactant: 756585
reactant: 756573
type: Reaction
reactant: 756597

735115
stoichiometry: 13.0
species: 539967
type: SpeciesReference

541829
value: 999999.0
type: LocalParameter

539536
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Methyl-2-oxobutanoate_C5H7O3
type: Species

540108
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Undecaprenyl diphosphate_C55H89O7P2
type: Species

542923
value: 0.0
type: LocalParameter

543144
value: 0.0
type: LocalParameter

749562
stoichiometry: 0.04
species: 539956
type: SpeciesReference

539488
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (R)-2,3-Dihydroxy-3-methylpentanoate_C6H11O4
type: Species

747028
stoichiometry: 1.0
species: 539698
type: SpeciesReference

748403
stoichiometry: 1.0
species: 540021
type: SpeciesReference

739137
stoichiometry: 1.0
species: 539746
type: SpeciesReference

752829
stoichiometry: 1.0
species: 540036
type: SpeciesReference

542232
value: 0.0
type: LocalParameter

751534
stoichiometry: 1.0
species: 540025
type: SpeciesReference

542136
value: 0.0
type: LocalParameter

543487
value: 0.0
type: LocalParameter

744050
stoichiometry: 1.0
species: 540125
type: SpeciesReference

540943
product: 746228
reactant: 746204
notes: Abbreviation: R_NADH7 Synonyms: _0 EC Number: 1.6.5.3 SUBSYSTEM: Oxidative Phosphorylation Equation: (3) h[c] + mqn8[c] + nadh[c] --> (2) h[e] + mql8[c] + nad[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_442#ABBREVIATION:ndh#ECNUMBERS:1.16.1.-,-!-,1.6.99.3# proteins: NAME:NADH dehydrogenase II#ABBREVIATION:Ndh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_442)
kinetic law: 746264
type: Reaction
product: 746240
reversible: false
name: NADH dehydrogenase (menaquinone-8 & 2 protons)
product: 746252
reactant: 746192
fast: false
reactant: 746216

540610
kinetic law: 739523
product: 739510
reactant: 739498
notes: Abbreviation: R_EX_h_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : h <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: H+ exchange
type: Reaction

542659
value: 999999.0
type: LocalParameter

543251
value: 999999.0
type: LocalParameter

541969
value: 0.0
type: LocalParameter

735090
stoichiometry: 7.0
species: 539779
type: SpeciesReference

541828
value: 0.0
type: LocalParameter

540107
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: UDP-N-acetylmuramate_C20H28N3O19P2
type: Species

543974
value: 0.0
type: LocalParameter

735952
stoichiometry: 1.0
species: 539783
type: SpeciesReference

543143
value: 0.0
type: LocalParameter

742404
stoichiometry: 1.0
species: 539638
type: SpeciesReference

736302
stoichiometry: 1.0
species: 539611
type: SpeciesReference

734508
stoichiometry: 1.0
species: 540013
type: SpeciesReference

735819
stoichiometry: 1.0
species: 539683
type: SpeciesReference

542233
value: 999999.0
type: LocalParameter

746396
stoichiometry: 1.0
species: 539506
type: SpeciesReference

543486
value: 0.0
type: LocalParameter

542346
value: -999999.0
type: LocalParameter

543711
value: -999999.0
type: LocalParameter

540946
fast: false
product: 746324
reversible: false
name: NADH dehydrogenase (demethylmenaquinone-8 & 2.8 protons)
reactant: 746276
reactant: 746288
type: Reaction
reactant: 746300
kinetic law: 746348
product: 746336
product: 746312
notes: Abbreviation: R_NADH8 Synonyms: _0 EC Number: 1.6.5.3 SUBSYSTEM: Oxidative Phosphorylation Equation: _2dmmq8[c] + (3.8) h[c] + nadh[c] --> 2dmmql8[c] + (2.8) h[e] + nad[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_442#ABBREVIATION:ndh#ECNUMBERS:1.16.1.-,-!-,1.6.99.3# proteins: NAME:NADH dehydrogenase II#ABBREVIATION:Ndh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_442)

736796
stoichiometry: 1.0
species: 539722
type: SpeciesReference

746119
stoichiometry: 1.0
species: 539783
type: SpeciesReference

542925
value: 0.0
type: LocalParameter

540835
kinetic law: 743697
product: 743685
product: 743673
reactant: 743661
notes: Abbreviation: R_IGPDH Synonyms: _0 EC Number: 4.2.1.19 SUBSYSTEM: Histidine Metabolism Equation: [c] : eig3p --> h2o + imacp Confidence Level: 2 genes: LOCUS:BPLAN_204#ABBREVIATION:hisB#ECNUMBERS:3.1.3.15,-!-,4.2.1.19# proteins: NAME:Imidazoleglycerol phosphate dehydratase and Histidinol phosphatase#ABBREVIATION:HisB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_204)
fast: false
reversible: false
name: imidazoleglycerol-phosphate dehydratase
type: Reaction

542656
value: 0.0
type: LocalParameter

742331
stoichiometry: 1.0
species: 539762
type: SpeciesReference

539538
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (S)-3-Methyl-2-oxopentanoate_C6H9O3
type: Species

543146
value: 999999.0
type: LocalParameter

542347
value: 999999.0
type: LocalParameter

543710
value: 0.0
type: LocalParameter

737255
stoichiometry: 2.0
species: 539779
type: SpeciesReference

543489
value: 999999.0
type: LocalParameter

753288
stoichiometry: 1.0
species: 540092
type: SpeciesReference

540047
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Ribulose 5-phosphate_C5H9O8P
type: Species

541129
product: 750351
reactant: 750314
kinetic law: 750363
name: phosphate transport in/out via three Na+ symporter
reactant: 750326
reversible: true
product: 750338
fast: false
type: Reaction
notes: Abbreviation: R_PIt7 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: (3) na1[e] + pi[e] <==> (3) na1[c] + pi[c] Confidence Level: 2 NCD genes: LOCUS:BPLAN_272#ABBREVIATION:pit# proteins: NAME:phosphate sodium symporter#ABBREVIATION:Pit# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_272)

739946
stoichiometry: 1.0
species: 540174
type: SpeciesReference

541967
value: 999999.0
type: LocalParameter

541826
value: 0.0
type: LocalParameter

540109
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Undecaprenyl phosphate_C55H89O4P
type: Species

740694
stoichiometry: 1.0
species: 539659
type: SpeciesReference

544000
value: 999999.0
type: LocalParameter

542926
value: 0.0
type: LocalParameter

542657
value: 0.0
type: LocalParameter

543972
value: 999999.0
type: LocalParameter

753420
stoichiometry: 1.0
species: 539779
type: SpeciesReference

542137
value: 999999.0
type: LocalParameter

743709
stoichiometry: 1.0
species: 539500
type: SpeciesReference

750496
stoichiometry: 1.0
species: 539659
type: SpeciesReference

542235
value: 0.0
type: LocalParameter

737315
stoichiometry: 1.0
species: 539967
type: SpeciesReference

752611
stoichiometry: 1.0
species: 539796
type: SpeciesReference

543596
value: 0.0
type: LocalParameter

542236
value: 0.0
type: LocalParameter

753869
stoichiometry: 1.0
species: 540038
type: SpeciesReference

543603
value: 0.0
type: LocalParameter

748512
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543035
value: 999999.0
type: LocalParameter

539990
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Ornithine_C5H13N2O2
type: Species

754219
stoichiometry: 1.0
species: 539977
type: SpeciesReference

731873
stoichiometry: 1.0
species: 539754
type: SpeciesReference

540502
kinetic law: 737800
product: 737775
fast: false
product: 737763
reversible: false
name: dihydropteroate synthase
reactant: 737751
reactant: 737739
product: 737787
type: Reaction
notes: Abbreviation: R_DHPS2 Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 4abz + 6hmhptpp --> dhpt + h + ppi Confidence Level: 2 JLR- similar to DHPS except uses 6hmhptpp (has ketone rather than OH) genes: LOCUS:BPLAN_533#ABBREVIATION:folP#ECNUMBERS:2.5.1.15# proteins: NAME:Dihydropteroate synthase#ABBREVIATION:FolP# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_533)

540044
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Riboflavin_C17H20N4O6
type: Species

542341
value: 999999.0
type: LocalParameter

543692
value: 999999.0
type: LocalParameter

540592
kinetic law: 739305
product: 739293
reactant: 739281
notes: Abbreviation: R_EX_gly_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : gly <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Glycine exchange
type: Reaction

542139
value: 0.0
type: LocalParameter

734617
stoichiometry: 5.0
species: 539779
type: SpeciesReference

743219
stoichiometry: 1.0
species: 539582
type: SpeciesReference

542026
value: 0.0
type: LocalParameter

739245
stoichiometry: 1.0
species: 539761
type: SpeciesReference

731067
stoichiometry: 1.0
species: 539760
type: SpeciesReference

540727
fast: false
product: 741250
product: 741238
name: L-glutamate 5-semialdehyde dehydratase (spontaneous)
product: 741226
reactant: 741214
reversible: false
notes: Abbreviation: R_G5SADs Synonyms: _0 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : glu5sa --> 1pyr5c + h + h2o Confidence Level: 1 Needed in L-proline biosynthesis genes: none proteins: none citations: none GENE ASSOCIATION:
type: Reaction
kinetic law: 741262

543360
value: 0.0
type: LocalParameter

540268
product: 731705
fast: false
notes: Abbreviation: R_ADNK1 Synonyms: _0 EC Number: 2.7.1.20 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : adn + atp <==> adp + amp + h Confidence Level: 2 _2-Aminoadenosine can also act as acceptor genes: LOCUS:BPLAN_420#ABBREVIATION:adk#ECNUMBERS:2.7.4.3# proteins: NAME:Adenylate kinase#ABBREVIATION:Adk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_420)
kinetic law: 731717
reactant: 731657
reversible: true
name: adenosine kinase
product: 731681
type: Reaction
reactant: 731669
product: 731693

539914
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Isoleucine_C6H13NO2
type: Species

748029
stoichiometry: 1.0
species: 539638
type: SpeciesReference

541567
value: 0.0
type: LocalParameter

731729
stoichiometry: 1.0
species: 539691
type: SpeciesReference

541750
value: 0.0
type: LocalParameter

733010
stoichiometry: 1.0
species: 539783
type: SpeciesReference

741663
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543601
value: 999999.0
type: LocalParameter

543598
value: 0.0
type: LocalParameter

542238
value: -999999.0
type: LocalParameter

542029
value: 999999.0
type: LocalParameter

542343
value: 0.0
type: LocalParameter

541060
name: Nucleoside triphosphate tripolyhydrolase
reversible: false
kinetic law: 748840
type: Reaction
product: 748828
fast: false
product: 748816
reactant: 748804
notes: Abbreviation: R_NTPTP1 Synonyms: _0 EC Number: 3.1.5.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dgtp + h2o --> dgsn + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_029#ABBREVIATION:dgt#ECNUMBERS:3.1.5.1# proteins: NAME:putative transmembrane HD family protein#ABBREVIATION:Dgt# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_029)
reactant: 748792

749865
stoichiometry: 1.0
species: 539966
type: SpeciesReference

539759
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Glutamate_C5H8NO4
type: Species

540448
kinetic law: 736615
product: 736603
reactant: 736591
notes: Abbreviation: R_DAPE Synonyms: _0 EC Number: 5.1.1.7 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : 26dap-LL <==> 26dap-M Confidence Level: 2 genes: LOCUS:BPLAN_245#ABBREVIATION:dapF#ECNUMBERS:5.1.1.7# proteins: NAME:Diaminopimelate epimerase#ABBREVIATION:DapF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_245)
fast: false
reversible: true
name: diaminopimelate epimerase
type: Reaction

756525
stoichiometry: 1.0
species: 539783
type: SpeciesReference

734194
stoichiometry: 0.00215
species: 539964
type: SpeciesReference

541751
value: 999999.0
type: LocalParameter

738628
stoichiometry: 1.0
species: 539964
type: SpeciesReference

543694
value: 0.0
type: LocalParameter

542239
value: 999999.0
type: LocalParameter

742768
stoichiometry: 1.0
species: 539779
type: SpeciesReference

741457
stoichiometry: 1.0
species: 539964
type: SpeciesReference

542028
value: 0.0
type: LocalParameter

542344
value: 0.0
type: LocalParameter

742489
stoichiometry: 1.0
species: 539926
type: SpeciesReference

747136
stoichiometry: 1.0
species: 539659
type: SpeciesReference

543036
value: 0.0
type: LocalParameter

539758
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Glutamate 5-semialdehyde_C5H9NO3
type: Species

737607
stoichiometry: 1.0
species: 539996
type: SpeciesReference

541569
value: 0.0
type: LocalParameter

733095
stoichiometry: 1.0
species: 539779
type: SpeciesReference

541342
product: 755053
name: threonine synthase
notes: Abbreviation: R_THRS Synonyms: _0 EC Number: 4.2.3.1 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : h2o + phom --> pi + thr-L Confidence Level: 2 genes: LOCUS:BPLAN_140#ABBREVIATION:thrC#ECNUMBERS:4.2.3.1# proteins: NAME:Threonine synthase#ABBREVIATION:ThrC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_140)
kinetic law: 755065
product: 755041
fast: false
reactant: 755029
reversible: false
reactant: 755017
type: Reaction

539757
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Glutamine_C5H10N2O3
type: Species

541120
kinetic law: 750179
product: 750167
reactant: 750155
notes: Abbreviation: R_PGM Synonyms: _0 EC Number: 5.4.2.1 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : 2pg <==> 3pg Confidence Level: 2 SMP genes: LOCUS:BPLAN_405#ABBREVIATION:gpmA#ECNUMBERS:5.4.2.1# proteins: NAME:phosphoglycerate mutase I#ABBREVIATION:GpmA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_405)
fast: false
reversible: true
name: phosphoglycerate mutase
type: Reaction

737183
stoichiometry: 1.0
species: 540082
type: SpeciesReference

757395
stoichiometry: 1.0
species: 540122
type: SpeciesReference

543696
value: 0.0
type: LocalParameter

738135
stoichiometry: 1.0
species: 539611
type: SpeciesReference

738775
stoichiometry: 1.0
species: 539624
type: SpeciesReference

736844
stoichiometry: 1.0
species: 539783
type: SpeciesReference

540040
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: alpha-D-Ribose 1-phosphate_C5H9O8P
type: Species

542023
value: 999999.0
type: LocalParameter

541962
value: 999999.0
type: LocalParameter

754776
stoichiometry: 1.0
species: 539659
type: SpeciesReference

542439
value: 0.0
type: LocalParameter

541753
value: 0.0
type: LocalParameter

540265
type: Reaction
product: 731633
reactant: 731597
reversible: true
fast: false
product: 731621
name: adentylate kinase (ITP)
notes: Abbreviation: R_ADK4 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : amp + itp <==> adp + idp Confidence Level: 2 JLR genes: LOCUS:BPLAN_420#ABBREVIATION:adk#ECNUMBERS:2.7.4.3# proteins: NAME:Adenylate kinase#ABBREVIATION:Adk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_420)
kinetic law: 731645
reactant: 731609

540442
notes: Abbreviation: R_DADK Synonyms: _0 EC Number: 2.7.4.11 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + damp <==> adp + dadp Confidence Level: 2 AMP can also act as acceptor genes: LOCUS:BPLAN_420#ABBREVIATION:adk#ECNUMBERS:2.7.4.3# proteins: NAME:Adenylate kinase#ABBREVIATION:Adk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_420)
type: Reaction
fast: false
reactant: 736470
reversible: true
product: 736494
kinetic law: 736518
product: 736506
name: deoxyadenylate kinase
reactant: 736482

540595
kinetic law: 739341
product: 739329
reactant: 739317
notes: Abbreviation: R_EX_glyald_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : glyald <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: D-Glyceraldehyde exchange
type: Reaction

543363
value: 999999.0
type: LocalParameter

740501
stoichiometry: 1.0
species: 539702
type: SpeciesReference

742550
stoichiometry: 1.0
species: 539779
type: SpeciesReference

543606
value: 0.0
type: LocalParameter

541063
product: 748889
notes: Abbreviation: R_NTPTP2 Synonyms: _0 EC Number: 3.1.5.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gtp + h2o --> gsn + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_029#ABBREVIATION:dgt#ECNUMBERS:3.1.5.1# proteins: NAME:putative transmembrane HD family protein#ABBREVIATION:Dgt# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_029)
fast: false
name: Nucleoside triphosphate tripolyhydrolase
type: Reaction
kinetic law: 748901
reversible: false
reactant: 748852
reactant: 748865
product: 748877

749756
stoichiometry: 1.0
species: 539778
type: SpeciesReference

543697
value: -999999.0
type: LocalParameter

738412
stoichiometry: 1.0
species: 540013
type: SpeciesReference

543599
value: 0.0
type: LocalParameter

540041
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: alpha-D-Ribose 5-phosphate_C5H9O8P
type: Species

748965
stoichiometry: 1.0
species: 539990
type: SpeciesReference

744570
stoichiometry: 1.0
species: 539673
type: SpeciesReference

734110
stoichiometry: 0.203
species: 539776
type: SpeciesReference

541754
value: 0.0
type: LocalParameter

542022
value: -999999.0
type: LocalParameter

757238
stoichiometry: 1.0
species: 539754
type: SpeciesReference

740936
stoichiometry: 1.0
species: 539948
type: SpeciesReference

543030
value: 0.0
type: LocalParameter

541348
product: 755161
product: 755173
reversible: true
reactant: 755137
reactant: 755149
type: Reaction
kinetic law: 755185
fast: false
notes: Abbreviation: R_TKT2 Synonyms: _0 EC Number: 2.2.1.1 SUBSYSTEM: Pentose Phosphate Pathway Equation: [c] : e4p + xu5p-D <==> f6p + g3p Confidence Level: 2 SMP Two reactions for transketolase: TKT1 and TKT2 genes: LOCUS:BPLAN_239#ABBREVIATION:tkt#ECNUMBERS:2.2.1.1# LOCUS:BPLAN_238#ABBREVIATION:tkt#ECNUMBERS:2.2.1.1# proteins: NAME:transketolase N-terminal subunit#ABBREVIATION:Tkt# NAME:transketolase C-terminal subunit#ABBREVIATION:Tkt# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_239 and BPLAN_238)
name: transketolase

755811
stoichiometry: 1.0
species: 539922
type: SpeciesReference

539756
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Glutamine_C5H10N2O3
type: Species

540505
kinetic law: 737848
product: 737836
product: 737824
reactant: 737812
notes: Abbreviation: R_DHQD Synonyms: _0 EC Number: 4.2.1.10 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 3dhq <==> 3dhsk + h2o Confidence Level: 2 genes: LOCUS:BPLAN_551#ABBREVIATION:aroD#ECNUMBERS:4.2.1.10# proteins: NAME:_3-dehydroquinate dehydratase#ABBREVIATION:AroD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_551)
fast: false
reversible: true
name: _3-dehydroquinate dehydratase
type: Reaction

541609
value: 0.0
type: LocalParameter

746240
stoichiometry: 1.0
species: 539953
type: SpeciesReference

543718
value: 0.0
type: LocalParameter

543605
value: 0.0
type: LocalParameter

542590
value: 0.0
type: LocalParameter

750276
stoichiometry: 1.0
species: 539760
type: SpeciesReference

542025
value: 0.0
type: LocalParameter

739510
stoichiometry: 1.0
species: 540153
type: SpeciesReference

541960
value: 0.0
type: LocalParameter

735332
stoichiometry: 1.0
species: 539779
type: SpeciesReference

756609
stoichiometry: 1.0
species: 539967
type: SpeciesReference

541345
type: Reaction
name: transketolase
kinetic law: 755125
product: 755113
product: 755101
reactant: 755089
fast: false
reversible: true
reactant: 755077
notes: Abbreviation: R_TKT1 Synonyms: _0 EC Number: 2.2.1.1 SUBSYSTEM: Pentose Phosphate Pathway Equation: [c] : r5p + xu5p-D <==> g3p + s7p Confidence Level: 2 SMP Two reactions for transketolase: TKT1 and TKT2 genes: LOCUS:BPLAN_239#ABBREVIATION:tkt#ECNUMBERS:2.2.1.1# LOCUS:BPLAN_238#ABBREVIATION:tkt#ECNUMBERS:2.2.1.1# proteins: NAME:transketolase N-terminal subunit#ABBREVIATION:Tkt# NAME:transketolase C-terminal subunit#ABBREVIATION:Tkt# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_239 and BPLAN_238)

543033
value: 0.0
type: LocalParameter

738847
stoichiometry: 1.0
species: 539645
type: SpeciesReference

543361
value: 0.0
type: LocalParameter

543717
value: 0.0
type: LocalParameter

543699
value: 999999.0
type: LocalParameter

539993
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Orotidine 5'-phosphate_C10H10N2O11P
type: Species

741385
stoichiometry: 1.0
species: 539737
type: SpeciesReference

542340
value: -999999.0
type: LocalParameter

540445
type: Reaction
product: 736554
reactant: 736542
reversible: false
product: 736566
fast: false
notes: Abbreviation: R_DAPDC Synonyms: _0 EC Number: 4.1.1.20 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : 26dap-M + h --> co2 + lys-L Confidence Level: 2 genes: LOCUS:BPLAN_309#ABBREVIATION:lysA#ECNUMBERS:4.1.1.20# proteins: NAME:Diaminopimelate decarboxylase#ABBREVIATION:LysA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_309)
reactant: 736530
kinetic law: 736578
name: diaminopimelate decarboxylase

540598
kinetic law: 739378
product: 739365
reactant: 739353
notes: Abbreviation: R_EX_glyc_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : glyc <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Glycerol exchange
type: Reaction

543032
value: 0.0
type: LocalParameter

541756
value: -999999.0
type: LocalParameter

755787
stoichiometry: 1.0
species: 539534
type: SpeciesReference

539754
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: GDP_C10H12N5O11P2
type: Species

749129
stoichiometry: 1.0
species: 540012
type: SpeciesReference

732829
stoichiometry: 1.0
species: 539953
type: SpeciesReference