187869
value: 0.0
type: LocalParameter

195122
value: 0.0
type: LocalParameter

181658
kinetic law: 213124
reactant: 213112
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 1 5 Diaminopentane exchange
type: Reaction

193663
value: 0.0
type: LocalParameter

197354
value: 0.0
type: LocalParameter

305533
stoichiometry: 1.0
species: 178743
type: SpeciesReference

173789
stoichiometry: 1.0
species: 177972
type: SpeciesReference

224690
stoichiometry: 1.0
species: 179703
type: SpeciesReference

191431
value: 0.0
type: LocalParameter

183935
kinetic law: 272034
notes: GENE_ASSOCIATION: b0160 SUBSYSTEM: Nucleotide Salvage Pathway
reactant: 271982
reactant: 271995
name: Nucleoside triphosphate tripolyhydrolase
reversible: false
type: Reaction
fast: false
product: 272008
product: 272021

190053
value: 0.0
type: LocalParameter

182556
notes: GENE_ASSOCIATION: b3052 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
reversible: false
product: 239904
name: D glycero D manno heptose 7 phosphate kinase
kinetic law: 239916
type: Reaction
product: 239892
reactant: 239867
fast: false
reactant: 239855
product: 239879

195337
value: 0.0
type: LocalParameter

181657
kinetic law: 213100
reactant: 213088
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 1 4 alpha D glucan exchange
type: Reaction

197355
value: 0.0
type: LocalParameter

195123
value: 0.0
type: LocalParameter

255437
stoichiometry: 1.0
species: 177421
type: SpeciesReference

189732
value: 0.0
type: LocalParameter

277243
stoichiometry: 1.0
species: 179169
type: SpeciesReference

195338
value: 0.0
type: LocalParameter

193661
value: 1000.0
type: LocalParameter

195124
value: -1000.0
type: LocalParameter

230676
stoichiometry: 1.0
species: 177902
type: SpeciesReference

204927
stoichiometry: 1.0
species: 178375
type: SpeciesReference

160527
stoichiometry: 1.0
species: 179171
type: SpeciesReference

190056
value: 1000.0
type: LocalParameter

270332
stoichiometry: 1.0
species: 178004
type: SpeciesReference

213329
stoichiometry: 1.0
species: 177616
type: SpeciesReference

183933
reactant: 271917
reactant: 271904
reversible: false
notes: GENE_ASSOCIATION: b2954 SUBSYSTEM: Nucleotide Salvage Pathway
fast: false
name: Nucleoside triphosphate pyrophosphorylase itp
type: Reaction
product: 271942
product: 271929
kinetic law: 271968
product: 271955

173572
stoichiometry: 1.0
species: 178651
type: SpeciesReference

195339
value: 1000.0
type: LocalParameter

193660
value: 0.0
type: LocalParameter

197353
value: 0.0
type: LocalParameter

269620
stoichiometry: 1.0
species: 179467
type: SpeciesReference

195125
value: 1000.0
type: LocalParameter

187868
value: 0.0
type: LocalParameter

181659
kinetic law: 213149
reactant: 213136
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 2 3 Cyclic AMP exchange
type: Reaction

191432
value: 1000.0
type: LocalParameter

183932
reversible: false
product: 271878
notes: GENE_ASSOCIATION: b2781 SUBSYSTEM: Nucleotide Salvage Pathway
name: Nucleoside triphosphate pyrophosphorylase utp
kinetic law: 271891
reactant: 271829
fast: false
reactant: 271841
product: 271853
product: 271865
type: Reaction

182559
notes: GENE_ASSOCIATION: b0200 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
product: 239964
kinetic law: 239976
product: 239952
reactant: 239928
type: Reaction
reversible: false
fast: false
name: D glycero D manno heptose 1 7 bisphosphate phosphatase
reactant: 239940

187114
stoichiometry: 1.0
species: 178247
type: SpeciesReference

195126
stoichiometry: 1.0
species: 178173
type: SpeciesReference

308736
stoichiometry: 1.0
species: 178173
type: SpeciesReference

284981
stoichiometry: 1.0
species: 178368
type: SpeciesReference

189736
value: 1000.0
type: LocalParameter

197358
value: 0.0
type: LocalParameter

194018
value: 0.0
type: LocalParameter

183939
fast: false
kinetic law: 272266
reactant: 272193
reactant: 272217
product: 272242
reactant: 272205
type: Reaction
notes: GENE_ASSOCIATION: ( b4070 and b4071 and b4072 and b4073 ) SUBSYSTEM: Nitrogen Metabolism
product: 272254
name: nitrite Reductase Ubiquinole 8 periplasm
product: 272229
reversible: false

187864
value: 0.0
type: LocalParameter

195127
value: 0.0
type: LocalParameter

233293
stoichiometry: 1.0
species: 178743
type: SpeciesReference

187866
value: 1000.0
type: LocalParameter

274241
stoichiometry: 1.0
species: 177577
type: SpeciesReference

195128
value: 0.0
type: LocalParameter

288662
stoichiometry: 1.0
species: 179533
type: SpeciesReference

187865
value: -1000.0
type: LocalParameter

194019
value: -1000.0
type: LocalParameter

183938
reactant: 272109
notes: GENE_ASSOCIATION: ( b3365 and b3366 ) SUBSYSTEM: Oxidative Phosphorylation
reactant: 272121
kinetic law: 272181
name: nitrite Reductase NADH
product: 272169
type: Reaction
reversible: false
fast: false
reactant: 272133
product: 272145
product: 272157

179205
notes: FORMULA: NO3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Nitrate
type: Species

174940
stoichiometry: 1.0
species: 179171
type: SpeciesReference

231609
stoichiometry: 1.0
species: 178596
type: SpeciesReference

179209
notes: FORMULA: NO
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Nitric-oxide
type: Species

221089
stoichiometry: 1.0
species: 178378
type: SpeciesReference

281376
stoichiometry: 1.0
species: 178226
type: SpeciesReference

183937
stoichiometry: 2.0
species: 178743
type: SpeciesReference

195129
value: -1000.0
type: LocalParameter

187862
value: 0.0
type: LocalParameter

171819
stoichiometry: 1.0
species: 178052
type: SpeciesReference

166626
stoichiometry: 1.0
species: 179471
type: SpeciesReference

228374
stoichiometry: 1.0
species: 179169
type: SpeciesReference

189733
value: 0.0
type: LocalParameter

251400
stoichiometry: 1.0
species: 178653
type: SpeciesReference

190051
stoichiometry: 1.0
species: 178263
type: SpeciesReference

165247
stoichiometry: 1.0
species: 177957
type: SpeciesReference

197357
value: 1000.0
type: LocalParameter

222015
stoichiometry: 1.0
species: 178737
type: SpeciesReference

186028
value: 0.0
type: LocalParameter

183936
product: 272085
reactant: 272048
reversible: false
notes: GENE_ASSOCIATION: b0160 SUBSYSTEM: Nucleotide Salvage Pathway
product: 272073
kinetic law: 272097
fast: false
type: Reaction
reactant: 272061
name: Nucleoside triphosphate tripolyhydrolase

190052
value: 0.0
type: LocalParameter

172051
stoichiometry: 1.0
species: 177935
type: SpeciesReference

179207
notes: FORMULA: NO3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Nitrate
type: Species

178402
notes: FORMULA: C13H18N4O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 6-7-Dimethyl-8-1-D-ribityl-lumazine
type: Species

195839
value: 0.0
type: LocalParameter

266789
stoichiometry: 1.0
species: 178173
type: SpeciesReference

178629
notes: FORMULA: C6H14NO5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Glucosamine
type: Species

178401
notes: FORMULA: C9H10N2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 5-6-Dimethylbenzimidazole
type: Species

186482
value: -1000.0
type: LocalParameter

202473
stoichiometry: 1.0
species: 178173
type: SpeciesReference

179201
notes: FORMULA: NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Nitrite
type: Species

206550
stoichiometry: 1.0
species: 178394
type: SpeciesReference

187861
value: 1000.0
type: LocalParameter

209806
stoichiometry: 1.0
species: 178365
type: SpeciesReference

181047
reactant: 172641
product: 172677
reversible: false
product: 172665
type: Reaction
product: 172689
notes: GENE_ASSOCIATION: b0516 SUBSYSTEM: Alternate Carbon Metabolism
fast: false
name: allantoate amidohydrolase
kinetic law: 172701
reactant: 172629
reactant: 172653

192817
value: 0.0
type: LocalParameter

180276
type: Reaction
product: 156159
reactant: 156123
notes: GENE_ASSOCIATION: ( b4034 and b4033 and b4032 and b4035 ) SUBSYSTEM: Transport Inner Membrane
product: 156183
product: 156171
product: 156195
fast: false
reactant: 156135
kinetic law: 156207
reactant: 156147
name: 1 4 alpha D glucan transport via ABC system periplasm
reversible: false

260533
stoichiometry: 1.0
species: 178743
type: SpeciesReference

178628
notes: FORMULA: C6H14NO5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Glucosamine
type: Species

178400
notes: FORMULA: C6H9O6PS
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 2-3-diketo-5-methylthio-1-phosphopentane
type: Species

296426
stoichiometry: 1.0
species: 178283
type: SpeciesReference

265930
stoichiometry: 1.0
species: 179171
type: SpeciesReference

203113
stoichiometry: 1.0
species: 178278
type: SpeciesReference

192814
value: 1000.0
type: LocalParameter

305761
stoichiometry: 1.0
species: 178173
type: SpeciesReference

174710
stoichiometry: 1.0
species: 177900
type: SpeciesReference

193669
value: 0.0
type: LocalParameter

178627
notes: FORMULA: C6H13NO8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Glucosamine-6-phosphate
type: Species

271442
stoichiometry: 1.0
species: 179501
type: SpeciesReference

290958
stoichiometry: 1.0
species: 179463
type: SpeciesReference

179203
notes: FORMULA: NO3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Nitrate
type: Species

178625
notes: FORMULA: C6H13NO8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Glucosamine-6-phosphate
type: Species

287273
stoichiometry: 1.0
species: 178745
type: SpeciesReference

160768
stoichiometry: 1.0
species: 177800
type: SpeciesReference

180273
kinetic law: 156111
product: 156099
reactant: 156087
notes: GENE_ASSOCIATION: SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: true
name: S Propane 1 2 diol facilitated transport periplasm
type: Reaction

181049
product: 172738
kinetic law: 172763
notes: GENE_ASSOCIATION: b0512 SUBSYSTEM: Nitrogen Metabolism
name: allantoinase
reversible: false
type: Reaction
reactant: 172725
reactant: 172713
product: 172751
fast: false

186484
value: 1000.0
type: LocalParameter

189310
value: 0.0
type: LocalParameter

235556
stoichiometry: 1.0
species: 180014
type: SpeciesReference

178626
notes: FORMULA: C6H13NO8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Glucosamine-6-phosphate
type: Species

189739
value: 0.0
type: LocalParameter

194452
value: -1000.0
type: LocalParameter

182550
kinetic law: 239771
product: 239759
product: 239747
reactant: 239735
notes: GENE_ASSOCIATION: b2053 SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
reversible: false
name: GDP D mannose dehydratase
type: Reaction

186269
value: 0.0
type: LocalParameter

267920
stoichiometry: 1.0
species: 178743
type: SpeciesReference

251859
stoichiometry: 1.0
species: 178856
type: SpeciesReference

178624
notes: FORMULA: C6H13NO8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Glucosamine-1-phosphate
type: Species

274472
stoichiometry: 1.0
species: 178278
type: SpeciesReference

218999
stoichiometry: 1.0
species: 179569
type: SpeciesReference

259102
stoichiometry: 1.0
species: 178958
type: SpeciesReference

235979
stoichiometry: 1.0
species: 178743
type: SpeciesReference

189315
value: 0.0
type: LocalParameter

193667
value: 1000.0
type: LocalParameter

180279
kinetic law: 156243
product: 156231
reactant: 156219
notes: GENE_ASSOCIATION: b4036 SUBSYSTEM: Transport Outer Membrane
fast: false
reversible: false
name: 1 4 alpha D glucan transport via diffusion extracellular to periplasm irreversible
type: Reaction

282749
stoichiometry: 1.0
species: 179317
type: SpeciesReference

174142
stoichiometry: 1.0
species: 178737
type: SpeciesReference

178623
notes: FORMULA: C6H9O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Galacturonate
type: Species

182553
reactant: 239807
product: 239819
kinetic law: 239843
reversible: false
reactant: 239795
reactant: 239783
fast: false
product: 239831
notes: GENE_ASSOCIATION: b3052 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
type: Reaction
name: D glycero D manno hepose 1 phosphate adenyltransferase

190059
value: 0.0
type: LocalParameter

159152
stoichiometry: 1.0
species: 177619
type: SpeciesReference

193666
value: 0.0
type: LocalParameter

241128
stoichiometry: 1.0
species: 178743
type: SpeciesReference

279397
stoichiometry: 1.0
species: 178016
type: SpeciesReference

186481
value: 0.0
type: LocalParameter

178622
notes: FORMULA: C6H9O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Galacturonate
type: Species

192810
value: 0.0
type: LocalParameter

195120
value: 1000.0
type: LocalParameter

189313
value: 1000.0
type: LocalParameter

193665
value: 0.0
type: LocalParameter

273790
stoichiometry: 1.0
species: 177568
type: SpeciesReference

178621
notes: FORMULA: C6H9O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Galacturonate
type: Species

188349
value: 0.0
type: LocalParameter

183273
stoichiometry: 1.0
species: 178008
type: SpeciesReference

192811
value: -1000.0
type: LocalParameter

288337
stoichiometry: 1.0
species: 179541
type: SpeciesReference

291705
stoichiometry: 2.0
species: 179235
type: SpeciesReference

181050
stoichiometry: 1.0
species: 178737
type: SpeciesReference

220569
stoichiometry: 47.172
species: 178737
type: SpeciesReference

195830
value: 1000.0
type: LocalParameter

202691
stoichiometry: 1.0
species: 178173
type: SpeciesReference

188347
value: 0.0
type: LocalParameter

196715
value: 0.0
type: LocalParameter

186264
value: 0.0
type: LocalParameter

175736
stoichiometry: 1.0
species: 178124
type: SpeciesReference

304810
stoichiometry: 1.0
species: 180030
type: SpeciesReference

187643
value: 0.0
type: LocalParameter

210457
stoichiometry: 1.0
species: 178758
type: SpeciesReference

181051
product: 172812
name: allantoin transport in via proton symport periplasm
reversible: true
product: 172800
reactant: 172775
kinetic law: 172824
reactant: 172788
type: Reaction
fast: false
notes: GENE_ASSOCIATION: b0511 SUBSYSTEM: Transport Inner Membrane

178620
notes: FORMULA: C6H14O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Galactitol
type: Species

168256
stoichiometry: 1.0
species: 178004
type: SpeciesReference

188348
value: 0.0
type: LocalParameter

196716
value: 1000.0
type: LocalParameter

186265
value: 0.0
type: LocalParameter

277692
stoichiometry: 1.0
species: 178737
type: SpeciesReference

187642
value: 0.0
type: LocalParameter

295889
stoichiometry: 1.0
species: 179687
type: SpeciesReference

194020
value: 1000.0
type: LocalParameter

178408
notes: FORMULA: C2H6OS
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Dimethyl-sulfoxide
type: Species

244570
stoichiometry: 1.0
species: 178872
type: SpeciesReference

195832
value: 0.0
type: LocalParameter

206334
stoichiometry: 1.0
species: 178390
type: SpeciesReference

299734
stoichiometry: 1.0
species: 177935
type: SpeciesReference

266122
stoichiometry: 1.0
species: 179173
type: SpeciesReference

189317
value: 0.0
type: LocalParameter

292587
stoichiometry: 1.0
species: 178743
type: SpeciesReference

181053
kinetic law: 172860
product: 172848
reactant: 172836
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: allantoin transport via diffusion extracellular to periplasm
type: Reaction

259823
stoichiometry: 1.0
species: 178743
type: SpeciesReference

178409
notes: FORMULA: C2H6OS
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Dimethyl-sulfoxide
type: Species

205567
stoichiometry: 1.0
species: 179171
type: SpeciesReference

179066
stoichiometry: 1.0
species: 178734
type: SpeciesReference

227875
stoichiometry: 1.0
species: 178743
type: SpeciesReference

188346
stoichiometry: 1.0
species: 178263
type: SpeciesReference

195833
stoichiometry: 1.0
species: 178173
type: SpeciesReference

182700
kinetic law: 243052
product: 243040
reactant: 243028
notes: GENE_ASSOCIATION: ( b1377 or b0929 or b2215 or b0241 or s0001 or b3875 or b1319 or b0957 ) SUBSYSTEM: Transport Outer Membrane
fast: false
reversible: true
name: H2O transport via diffusion extracellular to periplasm
type: Reaction

186267
value: 1000.0
type: LocalParameter

197579
value: 0.0
type: LocalParameter

187640
value: 0.0
type: LocalParameter

196714
value: 0.0
type: LocalParameter

189318
value: 0.0
type: LocalParameter

223408
stoichiometry: 1.0
species: 178283
type: SpeciesReference

190277
value: 0.0
type: LocalParameter

193079
value: -1000.0
type: LocalParameter

178406
notes: FORMULA: C2H6S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Dimethyl-sulfide
type: Species

206117
stoichiometry: 1.0
species: 178737
type: SpeciesReference

265508
stoichiometry: 1.0
species: 179918
type: SpeciesReference

182703
kinetic law: 243088
product: 243076
reactant: 243064
notes: GENE_ASSOCIATION: ( b0875 or s0001 ) SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: true
name: H2O transport via diffusion periplasm
type: Reaction

186486
value: 0.0
type: LocalParameter

178405
notes: FORMULA: C2H6S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Dimethyl-sulfide
type: Species

247927
stoichiometry: 1.0
species: 179171
type: SpeciesReference

195834
value: 0.0
type: LocalParameter

188343
value: 0.0
type: LocalParameter

186260
value: 1000.0
type: LocalParameter

178407
notes: FORMULA: C2H6OS
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Dimethyl-sulfoxide
type: Species

181055
kinetic law: 172896
product: 172884
reactant: 172872
notes: GENE_ASSOCIATION: b4085 SUBSYSTEM: Alternate Carbon Metabolism
fast: false
reversible: true
name: Allulose 6 phosphate epimerase
type: Reaction

192808
stoichiometry: 2.0
species: 178743
type: SpeciesReference

211698
stoichiometry: 1.0
species: 177688
type: SpeciesReference

284437
stoichiometry: 1.0
species: 178739
type: SpeciesReference

308955
stoichiometry: 1.0
species: 180239
type: SpeciesReference

160985
stoichiometry: 1.0
species: 177996
type: SpeciesReference

180282
kinetic law: 156279
product: 156267
reactant: 156255
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: 23cAMP transport via diffusion extracellular to periplasm
type: Reaction

247234
stoichiometry: 1.0
species: 178730
type: SpeciesReference

282966
stoichiometry: 1.0
species: 178745
type: SpeciesReference

188344
value: 1000.0
type: LocalParameter

195835
value: 0.0
type: LocalParameter

183491
kinetic law: 258921
name: Malate transport via proton symport 2 H periplasm
fast: false
reactant: 258885
reactant: 258873
product: 258897
product: 258909
type: Reaction
reversible: false
notes: GENE_ASSOCIATION: b3528 SUBSYSTEM: Transport Inner Membrane

244994
stoichiometry: 1.0
species: 178173
type: SpeciesReference

288119
stoichiometry: 1.0
species: 179527
type: SpeciesReference

192807
value: 0.0
type: LocalParameter

181057
product: 172957
reactant: 172920
reactant: 172933
fast: false
reversible: false
reactant: 172908
product: 172945
kinetic law: 172993
product: 172981
product: 172969
name: D allose transport via ABC system periplasm
type: Reaction
notes: GENE_ASSOCIATION: ( b4087 and b4088 and b4086 ) SUBSYSTEM: Transport Inner Membrane

250336
stoichiometry: 1.0
species: 177941
type: SpeciesReference

186488
value: 0.0
type: LocalParameter

278624
stoichiometry: 1.0
species: 178743
type: SpeciesReference

186262
value: 0.0
type: LocalParameter

157388
stoichiometry: 1.0
species: 178173
type: SpeciesReference

178403
notes: FORMULA: C5H9O7P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Dimethylallyl-diphosphate
type: Species

190278
value: -0.01
type: LocalParameter

193078
value: 0.0
type: LocalParameter

274737
stoichiometry: 1.0
species: 179287
type: SpeciesReference

165670
stoichiometry: 1.0
species: 178173
type: SpeciesReference

186489
value: 0.0
type: LocalParameter

264555
stoichiometry: 1.0
species: 179457
type: SpeciesReference

188342
value: 0.0
type: LocalParameter

207047
stoichiometry: 1.0
species: 178556
type: SpeciesReference

195837
value: 1000.0
type: LocalParameter

168028
stoichiometry: 1.0
species: 178820
type: SpeciesReference

196718
value: 0.0
type: LocalParameter

214004
stoichiometry: 1.0
species: 178040
type: SpeciesReference

299128
stoichiometry: 1.0
species: 178381
type: SpeciesReference

178404
notes: FORMULA: C2H6S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Dimethyl-sulfide
type: Species

190272
stoichiometry: 1.0
species: 178268
type: SpeciesReference

182707
stoichiometry: 1.0
species: 178743
type: SpeciesReference

273098
stoichiometry: 1.0
species: 178743
type: SpeciesReference

270768
stoichiometry: 1.0
species: 178743
type: SpeciesReference

194027
value: 0.0
type: LocalParameter

186022
value: 0.0
type: LocalParameter

251279
stoichiometry: 1.0
species: 180006
type: SpeciesReference

304385
stoichiometry: 1.0
species: 179173
type: SpeciesReference

244268
stoichiometry: 1.0
species: 178754
type: SpeciesReference

191438
value: 1000.0
type: LocalParameter

195341
value: 0.0
type: LocalParameter

224473
stoichiometry: 1.0
species: 179703
type: SpeciesReference

193075
value: 0.0
type: LocalParameter

269404
stoichiometry: 1.0
species: 178737
type: SpeciesReference

183497
kinetic law: 259018
product: 259005
reactant: 258993
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: Malate transport via diffusion extracellular to periplasm
type: Reaction

280099
stoichiometry: 1.0
species: 178743
type: SpeciesReference

182706
kinetic law: 243148
product: 243124
reversible: false
type: Reaction
name: Hydrogen sulfide oxidation
product: 243136
reactant: 243100
reactant: 243112
notes: GENE_ASSOCIATION: SUBSYSTEM: Inorganic Ion Transport and Metabolism
fast: false

190271
value: 1000.0
type: LocalParameter

297694
stoichiometry: 1.0
species: 179753
type: SpeciesReference

195119
value: -1000.0
type: LocalParameter

194026
value: 1000.0
type: LocalParameter

191439
value: 0.0
type: LocalParameter

258452
stoichiometry: 1.0
species: 178743
type: SpeciesReference

197572
value: 0.0
type: LocalParameter

182709
kinetic law: 243184
product: 243172
reactant: 243160
notes: GENE_ASSOCIATION: s0001 SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: false
name: h2s transport periplasm
type: Reaction

190274
value: 0.0
type: LocalParameter

181650
kinetic law: 212797
product: 212785
reactant: 212773
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: ethanolamine transport via diffusion extracellular
type: Reaction

194029
value: 0.0
type: LocalParameter

236654
stoichiometry: 1.0
species: 178675
type: SpeciesReference

197571
value: 1000.0
type: LocalParameter

181651
name: ethanesulfonate transport via ABC system periplasm
product: 212870
reactant: 212809
product: 212858
product: 212846
type: Reaction
kinetic law: 212894
notes: GENE_ASSOCIATION: ( b0936 and b0933 and b0934 ) SUBSYSTEM: Transport Inner Membrane
reversible: false
reactant: 212833
fast: false
product: 212882
reactant: 212821

195343
value: 0.0
type: LocalParameter

305002
stoichiometry: 1.0
species: 180034
type: SpeciesReference

305314
stoichiometry: 1.0
species: 180050
type: SpeciesReference

158227
stoichiometry: 1.0
species: 177425
type: SpeciesReference

164329
stoichiometry: 1.0
species: 177941
type: SpeciesReference

255219
stoichiometry: 1.0
species: 178113
type: SpeciesReference

186025
value: 1000.0
type: LocalParameter

175519
stoichiometry: 1.0
species: 178131
type: SpeciesReference

195342
value: 0.0
type: LocalParameter

252656
stoichiometry: 1.0
species: 178738
type: SpeciesReference

181652
kinetic law: 212930
product: 212918
reactant: 212906
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: ethanesulfonate transport via diffusion extracellular to periplasm
type: Reaction

183494
reactant: 258945
name: Malate transport via proton symport 3 H periplasm
product: 258969
reversible: false
type: Reaction
product: 258957
fast: false
reactant: 258933
notes: GENE_ASSOCIATION: ( b4123 or b4138 ) SUBSYSTEM: Transport Inner Membrane
kinetic law: 258981

261767
stoichiometry: 1.0
species: 179010
type: SpeciesReference

193074
stoichiometry: 2.0
species: 178518
type: SpeciesReference

195346
value: 0.0
type: LocalParameter

203854
stoichiometry: 1.0
species: 178743
type: SpeciesReference

183930
reversible: false
reactant: 271768
product: 271780
name: Nucleoside triphosphate pyrophosphorylase dttp
notes: GENE_ASSOCIATION: ( b2251 or b2781 ) SUBSYSTEM: Nucleotide Salvage Pathway
reactant: 271756
product: 271804
type: Reaction
kinetic law: 271817
fast: false
product: 271792

275840
stoichiometry: 1.0
species: 179333
type: SpeciesReference

270344
stoichiometry: 1.0
species: 179463
type: SpeciesReference

288880
stoichiometry: 1.0
species: 179685
type: SpeciesReference

191434
value: 0.0
type: LocalParameter

194022
value: 0.0
type: LocalParameter

197351
value: 1000.0
type: LocalParameter

187648
value: 0.0
type: LocalParameter

181653
product: 212979
type: Reaction
reactant: 212954
name: ethanol reversible transport via proton symport periplasm
notes: GENE_ASSOCIATION: SUBSYSTEM: Transport Inner Membrane
reactant: 212942
kinetic law: 212991
fast: false
product: 212967
reversible: true

285677
stoichiometry: 1.0
species: 179159
type: SpeciesReference

196712
value: 0.0
type: LocalParameter

193072
value: 1000.0
type: LocalParameter

197350
value: 0.0
type: LocalParameter

191435
value: 0.0
type: LocalParameter

225427
stoichiometry: 1.0
species: 178527
type: SpeciesReference

197576
value: 1000.0
type: LocalParameter

181654
kinetic law: 213028
product: 213015
reactant: 213003
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: ethanol transport via diffusion extracellular to periplasm
type: Reaction

195344
value: 1000.0
type: LocalParameter

187647
value: 0.0
type: LocalParameter

245030
stoichiometry: 1.0
species: 178743
type: SpeciesReference

195348
value: 0.0
type: LocalParameter

187645
stoichiometry: 1.0
species: 179589
type: SpeciesReference

170815
stoichiometry: 1.0
species: 177876
type: SpeciesReference

274021
stoichiometry: 1.0
species: 177565
type: SpeciesReference

186694
stoichiometry: 1.0
species: 179363
type: SpeciesReference

260040
stoichiometry: 1.0
species: 178050
type: SpeciesReference

186020
value: 0.0
type: LocalParameter

191436
value: 0.0
type: LocalParameter

232722
stoichiometry: 1.0
species: 178173
type: SpeciesReference

281593
stoichiometry: 1.0
species: 178229
type: SpeciesReference

181655
kinetic law: 213052
reactant: 213040
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: R Propane 1 2 diol exchange
type: Reaction

187646
value: 0.0
type: LocalParameter

244788
stoichiometry: 1.0
species: 178648
type: SpeciesReference

194024
value: 0.0
type: LocalParameter

197575
value: 0.0
type: LocalParameter

195347
value: 0.0
type: LocalParameter

196710
value: 1000.0
type: LocalParameter

187644
value: 1000.0
type: LocalParameter

186021
value: 0.0
type: LocalParameter

290101
stoichiometry: 1.0
species: 178283
type: SpeciesReference

275211
stoichiometry: 1.0
species: 179303
type: SpeciesReference

197574
value: 0.0
type: LocalParameter

181656
kinetic law: 213076
reactant: 213064
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: S Propane 1 2 diol exchange
type: Reaction

187859
value: -1000.0
type: LocalParameter

194023
value: 0.0
type: LocalParameter

181648
kinetic law: 212700
product: 212688
product: 212676
reactant: 212664
notes: GENE_ASSOCIATION: ( b2440 and b2441 ) SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
reversible: false
name: Ethanolamine ammonia lyase
type: Reaction

160515
stoichiometry: 1.0
species: 177658
type: SpeciesReference

270320
stoichiometry: 1.0
species: 178737
type: SpeciesReference

197340
value: 1000.0
type: LocalParameter

288132
stoichiometry: 1.0
species: 179529
type: SpeciesReference

230664
stoichiometry: 1.0
species: 177302
type: SpeciesReference

187855
value: 1000.0
type: LocalParameter

195137
value: 0.0
type: LocalParameter

187854
value: 0.0
type: LocalParameter

193672
value: 0.0
type: LocalParameter

190043
value: 0.0
type: LocalParameter

183945
type: Reaction
product: 272483
kinetic law: 272519
product: 272495
name: O16 antigen polymerase periplasm
notes: GENE_ASSOCIATION: ( b2035 and b2027 ) SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
reversible: false
reactant: 272471
fast: false
product: 272507

173560
stoichiometry: 1.0
species: 178944
type: SpeciesReference

191420
value: 0.0
type: LocalParameter

258897
stoichiometry: 2.0
species: 178743
type: SpeciesReference

304593
stoichiometry: 1.0
species: 180002
type: SpeciesReference

181647
notes: GENE_ASSOCIATION: b0585 SUBSYSTEM: Inorganic Ion Transport and Metabolism
reversible: false
product: 212640
reactant: 212604
kinetic law: 212652
name: Enterochelin Esterase Fe containing
type: Reaction
product: 212628
product: 212616
reactant: 212592
fast: false

195138
value: 0.0
type: LocalParameter

193671
value: 0.0
type: LocalParameter

187102
stoichiometry: 1.0
species: 178173
type: SpeciesReference

308748
stoichiometry: 1.0
species: 178737
type: SpeciesReference

183944
type: Reaction
reactant: 272399
fast: false
notes: GENE_ASSOCIATION: b3622 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
kinetic law: 272459
product: 272423
product: 272447
product: 272435
reactant: 272411
reversible: false
name: O16 anitgen x4 ligase periplasm

305545
stoichiometry: 1.0
species: 179463
type: SpeciesReference

195134
value: 0.0
type: LocalParameter

187857
value: 0.0
type: LocalParameter

181646
product: 212556
kinetic law: 212580
notes: GENE_ASSOCIATION: b0585 SUBSYSTEM: Inorganic Ion Transport and Metabolism
product: 212568
reactant: 212531
name: Enterochelin Esterase
reactant: 212543
fast: false
type: Reaction
reversible: false

197342
value: 0.0
type: LocalParameter

193675
value: 0.0
type: LocalParameter

195349
value: 1000.0
type: LocalParameter

172280
stoichiometry: 1.0
species: 178737
type: SpeciesReference

196502
value: 1000.0
type: LocalParameter

183947
name: O16 antigen polymerase periplasm
product: 272555
reversible: false
fast: false
reactant: 272543
kinetic law: 272592
notes: GENE_ASSOCIATION: ( b2035 and b2027 ) SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
product: 272567
product: 272580
reactant: 272531
type: Reaction

222716
stoichiometry: 1.0
species: 179501
type: SpeciesReference

182568
kinetic law: 240218
product: 240206
reactant: 240194
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: GMP transport via diffusion extracellular to periplasm
type: Reaction

234307
stoichiometry: 1.0
species: 178625
type: SpeciesReference

223844
stoichiometry: 1.0
species: 178514
type: SpeciesReference

195135
value: 1000.0
type: LocalParameter

187858
value: 0.0
type: LocalParameter

186019
value: 1000.0
type: LocalParameter

181645
reversible: false
name: enterochelin synthase
reactant: 212459
notes: GENE_ASSOCIATION: b0583 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
kinetic law: 212519
product: 212507
type: Reaction
product: 212495
reactant: 212471
product: 212483
fast: false

197343
value: 0.0
type: LocalParameter

193673
value: 1000.0
type: LocalParameter

190042
value: 0.0
type: LocalParameter

189720
stoichiometry: 1.0
species: 179399
type: SpeciesReference

260100
stoichiometry: 1.0
species: 178050
type: SpeciesReference

171320
stoichiometry: 1.0
species: 178058
type: SpeciesReference

197344
value: 0.0
type: LocalParameter

187629
value: 0.0
type: LocalParameter

290331
stoichiometry: 1.0
species: 179281
type: SpeciesReference

156823
stoichiometry: 1.0
species: 177601
type: SpeciesReference

165234
stoichiometry: 1.0
species: 178173
type: SpeciesReference

178619
notes: FORMULA: C6H14O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Galactitol
type: Species

166614
stoichiometry: 1.0
species: 178510
type: SpeciesReference

194008
value: -1000.0
type: LocalParameter

196504
value: 0.0
type: LocalParameter

229315
stoichiometry: 1.0
species: 178571
type: SpeciesReference

186017
value: 0.0
type: LocalParameter

187850
value: 1000.0
type: LocalParameter

171807
stoichiometry: 1.0
species: 178745
type: SpeciesReference

176904
stoichiometry: 1.0
species: 178085
type: SpeciesReference

218277
stoichiometry: 1.0
species: 179149
type: SpeciesReference

221076
stoichiometry: 1.0
species: 178507
type: SpeciesReference

244558
stoichiometry: 1.0
species: 178020
type: SpeciesReference

222027
stoichiometry: 1.0
species: 179801
type: SpeciesReference

178618
notes: FORMULA: C6H13O9P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Galactitol-1-phosphate
type: Species

228361
stoichiometry: 1.0
species: 178743
type: SpeciesReference

189722
value: 0.0
type: LocalParameter

281388
stoichiometry: 1.0
species: 178690
type: SpeciesReference

172063
stoichiometry: 1.0
species: 178743
type: SpeciesReference

183948
product: 272652
reactant: 272616
name: O16 antigen polymerase periplasm
product: 272640
reversible: false
reactant: 272604
fast: false
notes: GENE_ASSOCIATION: ( b2035 and b2027 ) SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
product: 272628
kinetic law: 272664
type: Reaction

187851
value: 0.0
type: LocalParameter

186016
value: 0.0
type: LocalParameter

194009
value: 1000.0
type: LocalParameter

219918
stoichiometry: 1.0
species: 180022
type: SpeciesReference

197346
value: 1000.0
type: LocalParameter

189723
value: 0.0
type: LocalParameter

196506
value: 0.0
type: LocalParameter

186015
value: 0.0
type: LocalParameter

195139
value: 0.0
type: LocalParameter

197347
value: 0.0
type: LocalParameter

225632
stoichiometry: 2.0
species: 178743
type: SpeciesReference

223420
stoichiometry: 1.0
species: 178745
type: SpeciesReference

181649
reactant: 212724
reactant: 212712
fast: false
notes: GENE_ASSOCIATION: SUBSYSTEM: Transport Inner Membrane
reversible: false
type: Reaction
product: 212749
name: ethanolamine transport in via proton symport
kinetic law: 212761
product: 212737

194007
value: 0.0
type: LocalParameter

274253
stoichiometry: 1.0
species: 178278
type: SpeciesReference

196505
stoichiometry: 1.0
species: 178305
type: SpeciesReference

288674
stoichiometry: 1.0
species: 179535
type: SpeciesReference

187853
value: 0.0
type: LocalParameter

186014
value: 1000.0
type: LocalParameter

197349
value: 0.0
type: LocalParameter

203101
stoichiometry: 1.0
species: 178743
type: SpeciesReference

185400
value: -1000.0
type: LocalParameter

178614
notes: FORMULA: C6H11O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Galactonate
type: Species

296438
stoichiometry: 1.0
species: 178743
type: SpeciesReference

178615
notes: FORMULA: C6H11O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Galactonate
type: Species

211004
stoichiometry: 1.0
species: 178743
type: SpeciesReference

189726
value: 1000.0
type: LocalParameter

290946
stoichiometry: 1.0
species: 178396
type: SpeciesReference

194463
value: 0.0
type: LocalParameter

174722
stoichiometry: 1.0
species: 178278
type: SpeciesReference

195828
value: 0.0
type: LocalParameter

180261
kinetic law: 155967
product: 155955
reactant: 155943
notes: GENE_ASSOCIATION: SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: false
name: 1 2 diacylglycerol transport via flipping periplasm to cytoplasm n C181
type: Reaction

196507
value: -1000.0
type: LocalParameter

186472
value: 0.0
type: LocalParameter

185401
value: 1000.0
type: LocalParameter

298634
stoichiometry: 1.0
species: 177941
type: SpeciesReference

178613
notes: FORMULA: C6H11O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Galactonate
type: Species

201171
stoichiometry: 1.0
species: 178333
type: SpeciesReference

287285
stoichiometry: 1.0
species: 179513
type: SpeciesReference

182562
fast: false
reactant: 240001
reactant: 240013
kinetic law: 240061
notes: GENE_ASSOCIATION: b0104 SUBSYSTEM: Purine and Pyrimidine Biosynthesis
product: 240049
reversible: false
name: GMP reductase
product: 240025
product: 240037
type: Reaction
reactant: 239988

194464
value: 1000.0
type: LocalParameter

219169
stoichiometry: 1.0
species: 179667
type: SpeciesReference

235544
stoichiometry: 1.0
species: 178743
type: SpeciesReference

245738
stoichiometry: 1.0
species: 178767
type: SpeciesReference

157593
stoichiometry: 1.0
species: 179359
type: SpeciesReference

195827
value: 0.0
type: LocalParameter

194461
value: 0.0
type: LocalParameter

178617
notes: FORMULA: C6H11O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: L-Galactonate
type: Species

192804
value: 1000.0
type: LocalParameter

181059
kinetic law: 173029
product: 173017
reactant: 173005
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: Allose transport via diffusion extracellular to periplasm
type: Reaction

202485
stoichiometry: 1.0
species: 178016
type: SpeciesReference

186470
value: 1000.0
type: LocalParameter

194462
value: 0.0
type: LocalParameter

305978
stoichiometry: 1.0
species: 180044
type: SpeciesReference

189729
value: 0.0
type: LocalParameter

178616
notes: FORMULA: C6H11O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: L-Galactonate
type: Species

209248
stoichiometry: 1.0
species: 179589
type: SpeciesReference

237368
stoichiometry: 1.0
species: 178173
type: SpeciesReference

260521
stoichiometry: 1.0
species: 179167
type: SpeciesReference

178610
notes: FORMULA: C6H8O8
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Galactarate
type: Species

279385
stoichiometry: 1.0
species: 179405
type: SpeciesReference

180264
kinetic law: 156003
product: 155991
reactant: 155979
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: R Propane 1 2 diol transport via diffusion extracellular to periplasm
type: Reaction

195132
value: 0.0
type: LocalParameter

193677
value: 0.0
type: LocalParameter

189301
value: 0.0
type: LocalParameter

295488
stoichiometry: 1.0
species: 179731
type: SpeciesReference

226921
stoichiometry: 2.0
species: 178743
type: SpeciesReference

175531
stoichiometry: 1.0
species: 178745
type: SpeciesReference

186258
value: 0.0
type: LocalParameter

189302
value: 0.0
type: LocalParameter

291717
stoichiometry: 1.0
species: 179595
type: SpeciesReference

195133
value: 0.0
type: LocalParameter

183285
stoichiometry: 1.0
species: 179507
type: SpeciesReference

214708
stoichiometry: 1.0
species: 178285
type: SpeciesReference

224039
stoichiometry: 1.0
species: 179463
type: SpeciesReference

190049
value: 0.0
type: LocalParameter

178612
notes: FORMULA: C6H11O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Galactonate
type: Species

259114
stoichiometry: 1.0
species: 178507
type: SpeciesReference

241116
stoichiometry: 1.0
species: 178690
type: SpeciesReference

186257
value: 0.0
type: LocalParameter

274460
stoichiometry: 1.0
species: 179281
type: SpeciesReference

193679
value: 1000.0
type: LocalParameter

189303
value: 0.0
type: LocalParameter

262357
stoichiometry: 1.0
species: 179018
type: SpeciesReference

180267
kinetic law: 156039
product: 156027
reactant: 156015
notes: GENE_ASSOCIATION: SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: true
name: R Propane 1 2 diol facilitated transport periplasm
type: Reaction

195130
value: 1000.0
type: LocalParameter

192800
value: 0.0
type: LocalParameter

190046
value: 1000.0
type: LocalParameter

178611
notes: FORMULA: C6H8O8
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Galactarate
type: Species

263044
stoichiometry: 1.0
species: 179115
type: SpeciesReference

182565
name: GMP synthase
product: 240133
reactant: 240109
reversible: false
kinetic law: 240181
product: 240121
reactant: 240085
fast: false
product: 240169
reactant: 240097
reactant: 240073
notes: GENE_ASSOCIATION: b2507 SUBSYSTEM: Purine and Pyrimidine Biosynthesis
product: 240145
product: 240157
type: Reaction

174154
stoichiometry: 1.0
species: 177999
type: SpeciesReference

189304
value: 1000.0
type: LocalParameter

193678
value: -1000.0
type: LocalParameter

192801
value: -1000.0
type: LocalParameter

301408
stoichiometry: 1.0
species: 178743
type: SpeciesReference

210444
stoichiometry: 1.0
species: 179765
type: SpeciesReference

197567
value: 0.0
type: LocalParameter

299746
stoichiometry: 1.0
species: 178679
type: SpeciesReference

197568
value: 0.0
type: LocalParameter

189307
value: 0.0
type: LocalParameter

206322
stoichiometry: 1.0
species: 177896
type: SpeciesReference

266134
stoichiometry: 1.0
species: 179103
type: SpeciesReference

195820
value: 0.0
type: LocalParameter

227128
stoichiometry: 1.0
species: 178543
type: SpeciesReference

188357
value: 0.0
type: LocalParameter

259835
stoichiometry: 1.0
species: 179589
type: SpeciesReference

205579
stoichiometry: 1.0
species: 179803
type: SpeciesReference

197566
value: 0.0
type: LocalParameter

181065
product: 173205
fast: false
name: aldose reductase methylglyoxal
product: 173218
kinetic law: 173231
reactant: 173166
reactant: 173179
reversible: false
notes: GENE_ASSOCIATION: ( b3012 or b0207 or b1781 or b3001 ) SUBSYSTEM: Methylglyoxal Metabolism
type: Reaction
reactant: 173192

292599
stoichiometry: 1.0
species: 178794
type: SpeciesReference

217744
stoichiometry: 1.0
species: 178910
type: SpeciesReference

227887
stoichiometry: 1.0
species: 179463
type: SpeciesReference

186255
value: 0.0
type: LocalParameter

196726
value: 0.0
type: LocalParameter

179078
notes: FORMULA: C25H35N7O19P3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: S-Methylmalonyl-CoA
type: Species

220557
stoichiometry: 0.2151
species: 178723
type: SpeciesReference

287066
stoichiometry: 1.5
species: 179229
type: SpeciesReference

188358
value: 1000.0
type: LocalParameter

195821
value: 0.0
type: LocalParameter

213112
stoichiometry: 1.0
species: 177236
type: SpeciesReference

196727
value: 0.0
type: LocalParameter

189309
value: 0.0
type: LocalParameter

175748
stoichiometry: 1.0
species: 178745
type: SpeciesReference

186478
stoichiometry: 2.0
species: 178743
type: SpeciesReference

182993
product: 249082
notes: GENE_ASSOCIATION: b0477 SUBSYSTEM: Nucleotide Salvage Pathway
kinetic law: 249095
product: 249070
reversible: false
reactant: 249046
type: Reaction
fast: false
reactant: 249034
name: insosine kinase
product: 249058

187631
value: 0.0
type: LocalParameter

295876
stoichiometry: 1.0
species: 178173
type: SpeciesReference

188359
value: 0.0
type: LocalParameter

194459
value: 1000.0
type: LocalParameter

190268
value: 0.0
type: LocalParameter

181063
reactant: 173115
product: 173140
notes: GENE_ASSOCIATION: ( b0657 and b1677 ) SUBSYSTEM: Unassigned
kinetic law: 173153
reactant: 173103
product: 173127
fast: false
reversible: false
type: Reaction
name: apolipoprotein N acyltransferase phosphatidylglycerol periplasm

219388
stoichiometry: 1.0
species: 179755
type: SpeciesReference

186479
value: 0.0
type: LocalParameter

186253
value: 1000.0
type: LocalParameter

196728
value: 1000.0
type: LocalParameter

189308
stoichiometry: 1.0
species: 178266
type: SpeciesReference

277680
stoichiometry: 1.0
species: 178173
type: SpeciesReference

194458
value: 0.0
type: LocalParameter

195351
value: 0.0
type: LocalParameter

251871
stoichiometry: 1.0
species: 178743
type: SpeciesReference

193089
value: 0.0
type: LocalParameter

190267
value: 0.0
type: LocalParameter

202171
stoichiometry: 1.0
species: 178737
type: SpeciesReference

186250
value: 0.0
type: LocalParameter

188353
value: 0.0
type: LocalParameter

194457
value: 0.0
type: LocalParameter

181069
kinetic law: 173355
product: 173343
product: 173331
reactant: 173319
notes: GENE_ASSOCIATION: b3091 SUBSYSTEM: Alternate Carbon Metabolism
fast: false
reversible: false
name: altronate hydrolase
type: Reaction

157376
stoichiometry: 1.0
species: 177396
type: SpeciesReference

182999
kinetic law: 249191
reversible: false
product: 249179
product: 249167
reactant: 249155
notes: GENE_ASSOCIATION: b2964 SUBSYSTEM: Transport Inner Membrane
type: Reaction
name: inosine transport in via proton symport periplasm
reactant: 249143
fast: false

165682
stoichiometry: 1.0
species: 177998
type: SpeciesReference

176494
stoichiometry: 1.0
species: 178169
type: SpeciesReference

224256
stoichiometry: 1.0
species: 179445
type: SpeciesReference

195825
value: 0.0
type: LocalParameter

207059
stoichiometry: 4.0
species: 178743
type: SpeciesReference

264567
stoichiometry: 1.0
species: 178274
type: SpeciesReference

186251
value: 0.0
type: LocalParameter

168016
stoichiometry: 1.0
species: 178085
type: SpeciesReference

186477
value: 1000.0
type: LocalParameter

206105
stoichiometry: 1.0
species: 178387
type: SpeciesReference

174505
stoichiometry: 1.0
species: 179521
type: SpeciesReference

194454
value: 1000.0
type: LocalParameter

159707
stoichiometry: 1.0
species: 178737
type: SpeciesReference

194455
value: 0.0
type: LocalParameter

308968
stoichiometry: 1.0
species: 178016
type: SpeciesReference

212084
stoichiometry: 1.0
species: 177897
type: SpeciesReference

247915
stoichiometry: 1.0
species: 178795
type: SpeciesReference

217020
stoichiometry: 1.0
species: 178735
type: SpeciesReference

179499
notes: FORMULA: C10H8O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Prephenate
type: Species

241333
stoichiometry: 1.0
species: 178717
type: SpeciesReference

266342
stoichiometry: 1.0
species: 178085
type: SpeciesReference

186474
value: 0.0
type: LocalParameter

309298
stoichiometry: 0.2
species: 178743
type: SpeciesReference

181067
fast: false
reactant: 173257
reactant: 173270
product: 173283
reactant: 173244
product: 173295
reversible: false
kinetic law: 173307
type: Reaction
name: aldose reductase acetol
notes: GENE_ASSOCIATION: b3945 SUBSYSTEM: Glycerophospholipid Metabolism

190264
value: 0.0
type: LocalParameter

188356
value: 0.0
type: LocalParameter

195823
value: 1000.0
type: LocalParameter

250349
stoichiometry: 1.0
species: 178182
type: SpeciesReference

180270
kinetic law: 156075
product: 156063
reactant: 156051
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: S Propane 1 2 diol transport via diffusion extracellular to periplasm
type: Reaction

186475
value: -1000.0
type: LocalParameter

182996
kinetic law: 249131
product: 249119
reactant: 249107
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: inositol transport via diffusion extracellular to periplasm
type: Reaction

247246
stoichiometry: 2.0
species: 178743
type: SpeciesReference

252644
stoichiometry: 1.0
species: 178751
type: SpeciesReference

186012
value: 0.0
type: LocalParameter

305014
stoichiometry: 1.0
species: 178278
type: SpeciesReference

193085
value: 0.0
type: LocalParameter

236666
stoichiometry: 1.0
species: 177839
type: SpeciesReference

194016
value: 0.0
type: LocalParameter

190261
value: 1000.0
type: LocalParameter

193086
stoichiometry: 2.0
species: 178743
type: SpeciesReference

187637
value: 0.0
type: LocalParameter

195354
value: 1000.0
type: LocalParameter

181640
fast: false
notes: GENE_ASSOCIATION: b1855 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
product: 212228
reactant: 212204
product: 212216
name: Endotoxin Synthesis myristoyl transferase
type: Reaction
kinetic law: 212240
reversible: false
reactant: 212192

283328
stoichiometry: 1.0
species: 179255
type: SpeciesReference

186010
value: 0.0
type: LocalParameter

251267
stoichiometry: 1.0
species: 177984
type: SpeciesReference

194015
value: 1000.0
type: LocalParameter

190260
value: -1000.0
type: LocalParameter

299115
stoichiometry: 1.0
species: 179769
type: SpeciesReference

280087
stoichiometry: 1.0
species: 178016
type: SpeciesReference

269416
stoichiometry: 1.0
species: 178804
type: SpeciesReference

296860
stoichiometry: 1.0
species: 179731
type: SpeciesReference

195353
value: 0.0
type: LocalParameter

255207
stoichiometry: 1.0
species: 179393
type: SpeciesReference

197561
value: 0.0
type: LocalParameter

188352
value: 1000.0
type: LocalParameter

297682
stoichiometry: 1.0
species: 179463
type: SpeciesReference

186011
value: 0.0
type: LocalParameter

193088
value: 0.0
type: LocalParameter

194013
value: -1000.0
type: LocalParameter

191427
stoichiometry: 1.0
species: 178016
type: SpeciesReference

258464
stoichiometry: 1.0
species: 178944
type: SpeciesReference

187639
value: 1000.0
type: LocalParameter

195352
value: 0.0
type: LocalParameter

260052
stoichiometry: 1.0
species: 179127
type: SpeciesReference

284969
stoichiometry: 1.0
species: 177263
type: SpeciesReference

187633
value: 1000.0
type: LocalParameter

196721
value: -1000.0
type: LocalParameter

171104
stoichiometry: 1.0
species: 178737
type: SpeciesReference

170803
stoichiometry: 1.0
species: 178748
type: SpeciesReference

197563
value: 1000.0
type: LocalParameter

194012
value: 0.0
type: LocalParameter

196720
value: 0.0
type: LocalParameter

182990
kinetic law: 249022
fast: false
type: Reaction
product: 248998
reactant: 248974
reactant: 248986
reversible: false
name: Inosine hydrolase
product: 249010
notes: GENE_ASSOCIATION: b0030 SUBSYSTEM: Nucleotide Salvage Pathway

187848
value: 0.0
type: LocalParameter

181643
kinetic law: 212398
product: 212386
reactant: 212373
notes: GENE_ASSOCIATION: SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
fast: false
reversible: false
name: phosphoethanolamine lipid A transport via vector periplasm to extracellular
type: Reaction

265184
stoichiometry: 1.0
species: 178743
type: SpeciesReference

183941
product: 272339
reactant: 272278
type: Reaction
kinetic law: 272351
reactant: 272302
product: 272326
fast: false
reactant: 272290
reversible: false
name: nitrite Reductase Menaquinole 8 periplasm
notes: GENE_ASSOCIATION: ( b4070 and b4071 and b4072 and b4073 ) SUBSYSTEM: Nitrogen Metabolism
product: 272314

196722
value: 1000.0
type: LocalParameter

187632
value: 0.0
type: LocalParameter

195359
value: 1000.0
type: LocalParameter

181061
reactant: 173041
kinetic law: 173090
reactant: 173053
reversible: false
name: apolipoprotein N acyltransferase phosphatidylethanolamine periplasm
product: 173065
product: 173078
type: Reaction
fast: false
notes: GENE_ASSOCIATION: ( b0657 and b1677 ) SUBSYSTEM: Unassigned

193082
value: 1000.0
type: LocalParameter

244775
stoichiometry: 1.0
species: 178020
type: SpeciesReference

181644
kinetic law: 212447
product: 212435
product: 212422
reactant: 212410
notes: GENE_ASSOCIATION: b2779 SUBSYSTEM: GlycolysisGluconeogenesis
fast: false
reversible: true
name: enolase
type: Reaction

187847
value: 0.0
type: LocalParameter

197562
value: 0.0
type: LocalParameter

194011
value: 0.0
type: LocalParameter

290113
stoichiometry: 1.0
species: 179491
type: SpeciesReference

191425
value: 0.0
type: LocalParameter

183942
kinetic law: 272387
product: 272375
reactant: 272363
notes: GENE_ASSOCIATION: SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
fast: false
reversible: false
name: O16 antigen x4 core oligosaccharide lipid A transport periplasm to extracellular
type: Reaction

288892
stoichiometry: 1.0
species: 177830
type: SpeciesReference

179079
notes: FORMULA: C6H14NO2S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: S-Methyl-L-methionine
type: Species

203866
stoichiometry: 1.0
species: 178399
type: SpeciesReference

195358
value: 0.0
type: LocalParameter

234902
stoichiometry: 1.0
species: 178653
type: SpeciesReference

181641
reactant: 212265
product: 212277
reactant: 212252
name: Endotoxin Synthesis palmitoleoyl ACP
fast: false
type: Reaction
notes: GENE_ASSOCIATION: b2378 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
reversible: false
kinetic law: 212301
product: 212289

187636
value: 0.0
type: LocalParameter

191422
value: 1000.0
type: LocalParameter

195357
value: 0.0
type: LocalParameter

196724
value: 0.0
type: LocalParameter

181642
reactant: 212313
fast: false
product: 212337
reactant: 212325
notes: GENE_ASSOCIATION: b1855 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
product: 212349
name: Endotoxin Synthesis myristoyl transferase
reversible: false
kinetic law: 212361
type: Reaction

187635
value: 0.0
type: LocalParameter

195356
value: 0.0
type: LocalParameter

245042
stoichiometry: 1.0
species: 178958
type: SpeciesReference

191423
value: 0.0
type: LocalParameter

301420
stoichiometry: 1.0
species: 179815
type: SpeciesReference

196518
value: 1000.0
type: LocalParameter

191450
value: 0.0
type: LocalParameter

190073
value: 0.0
type: LocalParameter

178609
notes: FORMULA: C6H8O8
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Galactarate
type: Species

197592
value: 0.0
type: LocalParameter

181638
kinetic law: 212120
product: 212108
product: 212096
reactant: 212084
notes: GENE_ASSOCIATION: b1851 SUBSYSTEM: Pentose Phosphate Pathway
fast: false
reversible: false
name: 6 phosphogluconate dehydratase
type: Reaction

187889
value: 0.0
type: LocalParameter

243594
stoichiometry: 1.0
species: 177680
type: SpeciesReference

186002
value: -1000.0
type: LocalParameter

196517
stoichiometry: 1.0
species: 178306
type: SpeciesReference

156835
stoichiometry: 1.0
species: 177598
type: SpeciesReference

178608
notes: FORMULA: C6H12O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Galactose
type: Species

181637
kinetic law: 212072
product: 212060
product: 212048
reactant: 212036
notes: GENE_ASSOCIATION: b1850 SUBSYSTEM: Pentose Phosphate Pathway
fast: false
reversible: false
name: 2 dehydro 3 deoxy phosphogluconate aldolase
type: Reaction

197593
value: 0.0
type: LocalParameter

245762
stoichiometry: 1.0
species: 178765
type: SpeciesReference

225620
stoichiometry: 1.0
species: 178554
type: SpeciesReference

187886
value: 0.0
type: LocalParameter

186005
value: 0.0
type: LocalParameter

229327
stoichiometry: 1.0
species: 178745
type: SpeciesReference

176916
stoichiometry: 1.0
species: 178152
type: SpeciesReference

228398
stoichiometry: 1.0
species: 179167
type: SpeciesReference

178607
notes: FORMULA: C6H12O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Galactose
type: Species

290343
stoichiometry: 1.0
species: 179577
type: SpeciesReference

191453
value: 0.0
type: LocalParameter

269078
stoichiometry: 2.0
species: 179203
type: SpeciesReference

290970
stoichiometry: 1.0
species: 177505
type: SpeciesReference

196515
value: -1000.0
type: LocalParameter

186004
value: 1000.0
type: LocalParameter

194880
value: 1000.0
type: LocalParameter

172075
stoichiometry: 1.0
species: 179169
type: SpeciesReference

191451
stoichiometry: 1.0
species: 178286
type: SpeciesReference

190076
value: 1000.0
type: LocalParameter

251424
stoichiometry: 1.0
species: 177908
type: SpeciesReference

181639
name: Endotoxin Synthesis lauroyl transferase
kinetic law: 212180
product: 212156
fast: false
type: Reaction
product: 212168
reactant: 212144
notes: GENE_ASSOCIATION: b1054 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
reactant: 212132
reversible: false

191452
value: 0.0
type: LocalParameter

178606
notes: FORMULA: C6H12O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Galactose
type: Species

189759
value: 0.0
type: LocalParameter

222039
stoichiometry: 1.0
species: 178283
type: SpeciesReference

187888
value: 0.0
type: LocalParameter

175761
stoichiometry: 1.0
species: 178127
type: SpeciesReference

158067
stoichiometry: 1.0
species: 177443
type: SpeciesReference

241140
stoichiometry: 1.0
species: 178810
type: SpeciesReference

281016
stoichiometry: 1.0
species: 178737
type: SpeciesReference

234319
stoichiometry: 1.0
species: 178673
type: SpeciesReference

302013
stoichiometry: 2.0
species: 178653
type: SpeciesReference

172292
stoichiometry: 1.0
species: 179171
type: SpeciesReference

196514
value: 0.0
type: LocalParameter

183959
kinetic law: 273049
product: 273037
reactant: 273025
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: oxygen transport via diffusion extracellular to periplasm
type: Reaction

186008
stoichiometry: 2.0
species: 178743
type: SpeciesReference

181634
kinetic law: 211928
product: 211916
product: 211904
reactant: 211892
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
fast: false
reversible: true
name: 3 hydroxyacyl CoA dehydratase 3 hydroxytetradecanoyl CoA
type: Reaction

193092
value: 1000.0
type: LocalParameter

305557
stoichiometry: 1.0
species: 180042
type: SpeciesReference

240508
stoichiometry: 1.0
species: 178582
type: SpeciesReference

189756
value: 1000.0
type: LocalParameter

260112
stoichiometry: 1.0
species: 179129
type: SpeciesReference

194882
value: 0.0
type: LocalParameter

206141
stoichiometry: 1.0
species: 178743
type: SpeciesReference

186006
value: 0.0
type: LocalParameter

204903
stoichiometry: 1.0
species: 178743
type: SpeciesReference

195148
value: 0.0
type: LocalParameter

197379
value: 1000.0
type: LocalParameter

195147
value: 0.0
type: LocalParameter

181633
kinetic law: 211880
product: 211868
product: 211856
reactant: 211844
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
fast: false
reversible: true
name: 3 hydroxyacyl CoA dehydratase 3 hydroxydodecanoyl CoA
type: Reaction

186007
value: 0.0
type: LocalParameter

255413
stoichiometry: 1.0
species: 178585
type: SpeciesReference

223832
stoichiometry: 1.0
species: 178513
type: SpeciesReference

191454
value: 1000.0
type: LocalParameter

190079
value: 0.0
type: LocalParameter

183957
kinetic law: 273013
product: 273001
reactant: 272989
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: superoxide anion transport via diffusion extracellular to periplasm
type: Reaction

189753
value: 0.0
type: LocalParameter

196512
value: 0.0
type: LocalParameter

195149
value: 0.0
type: LocalParameter

194883
value: 0.0
type: LocalParameter

308981
stoichiometry: 1.0
species: 178743
type: SpeciesReference

197376
value: 0.0
type: LocalParameter

230652
stoichiometry: 1.0
species: 179271
type: SpeciesReference

194884
value: 0.0
type: LocalParameter

181636
kinetic law: 212024
product: 212012
product: 212000
reactant: 211988
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
fast: false
reversible: true
name: 3 hydroxyacyl CoA dehydratase 3 hydroxyoctadecanoyl CoA
type: Reaction

192830
value: 0.0
type: LocalParameter

174964
stoichiometry: 1.0
species: 178124
type: SpeciesReference

282761
stoichiometry: 1.0
species: 177517
type: SpeciesReference

191457
value: 0.0
type: LocalParameter

274761
stoichiometry: 1.0
species: 179289
type: SpeciesReference

183956
reactant: 272929
notes: GENE_ASSOCIATION: SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
reversible: false
reactant: 272917
type: Reaction
product: 272953
product: 272941
name: glucosyltransferase II LPS O16 antigen biosynthesis
product: 272965
kinetic law: 272977
fast: false

237172
stoichiometry: 1.0
species: 178673
type: SpeciesReference

187138
stoichiometry: 1.0
species: 178016
type: SpeciesReference

258885
stoichiometry: 1.0
species: 178918
type: SpeciesReference

181635
kinetic law: 211976
product: 211964
product: 211952
reactant: 211940
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
fast: false
reversible: true
name: 3 hydroxyacyl CoA dehydratase 3 hydroxyhexadecanoyl CoA
type: Reaction

196510
value: 1000.0
type: LocalParameter

186009
value: 1000.0
type: LocalParameter

197377
value: 0.0
type: LocalParameter

194885
value: 1000.0
type: LocalParameter

180258
kinetic law: 155931
product: 155919
reactant: 155907
notes: GENE_ASSOCIATION: SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: false
name: 1 2 diacylglycerol transport via flipping periplasm to cytoplasm n C180
type: Reaction

191456
value: 0.0
type: LocalParameter

192831
value: -1000.0
type: LocalParameter

258428
stoichiometry: 1.0
species: 178948
type: SpeciesReference

261017
stoichiometry: 1.0
species: 178745
type: SpeciesReference

195142
value: 0.0
type: LocalParameter

193643
value: 1000.0
type: LocalParameter

180255
kinetic law: 155895
product: 155883
reactant: 155871
notes: GENE_ASSOCIATION: SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: false
name: 1 2 diacylglycerol transport via flipping periplasm to cytoplasm n C161
type: Reaction

224678
stoichiometry: 1.0
species: 178743
type: SpeciesReference

187880
value: 0.0
type: LocalParameter

218975
stoichiometry: 1.0
species: 179563
type: SpeciesReference

267944
stoichiometry: 1.0
species: 179605
type: SpeciesReference

178600
notes: FORMULA: C157H271N2O84P4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: galactosyl-glucosyl-inner-core-oligosaccharide-lipid-A
type: Species

194470
value: 1000.0
type: LocalParameter

194887
value: 0.0
type: LocalParameter

192837
value: 0.0
type: LocalParameter

193642
value: -1000.0
type: LocalParameter

195143
value: 0.0
type: LocalParameter

179491
notes: FORMULA: C3H5O5P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Propanoyl-phosphate
type: Species

187881
value: 0.0
type: LocalParameter

174166
stoichiometry: 1.0
species: 179605
type: SpeciesReference

182577
product: 240424
name: GDP 4 oxo L fucose reductase
fast: false
reactant: 240400
kinetic law: 240436
notes: GENE_ASSOCIATION: b2052 SUBSYSTEM: Cell Envelope Biosynthesis
product: 240412
reactant: 240388
type: Reaction
reactant: 240376
reversible: false

167704
stoichiometry: 1.0
species: 178673
type: SpeciesReference

263032
stoichiometry: 1.0
species: 179117
type: SpeciesReference

261791
stoichiometry: 1.0
species: 178173
type: SpeciesReference

194471
value: 0.0
type: LocalParameter

192834
value: 1000.0
type: LocalParameter

193641
value: 0.0
type: LocalParameter

194888
value: 0.0
type: LocalParameter

195144
value: 0.0
type: LocalParameter

180252
kinetic law: 155859
product: 155847
reactant: 155835
notes: GENE_ASSOCIATION: SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: false
name: 1 2 diacylglycerol transport via flipping periplasm to cytoplasm n C160
type: Reaction

279373
stoichiometry: 1.0
species: 178737
type: SpeciesReference

224027
stoichiometry: 1.0
species: 178507
type: SpeciesReference

283365
stoichiometry: 1.0
species: 179373
type: SpeciesReference

194889
value: 0.0
type: LocalParameter

195145
value: 1000.0
type: LocalParameter

182721
product: 243328
kinetic law: 243364
reversible: false
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
product: 243340
name: 3 hydroxyacyl CoA dehydrogenase acetoacetyl CoA
reactant: 243316
product: 243352
reactant: 243304
type: Reaction
fast: false

175543
stoichiometry: 1.0
species: 178139
type: SpeciesReference

179493
notes: FORMULA: C10H13N2O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Porphobilinogen
type: Species

165260
stoichiometry: 1.0
species: 178016
type: SpeciesReference

193647
value: 0.0
type: LocalParameter

182571
product: 240255
reversible: false
fast: false
type: Reaction
product: 240280
reactant: 240230
name: phosphogluconate dehydrogenase
kinetic law: 240292
product: 240267
reactant: 240243
notes: GENE_ASSOCIATION: b2029 SUBSYSTEM: Pentose Phosphate Pathway

194473
value: 0.0
type: LocalParameter

178605
notes: FORMULA: C6H12O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: beta-D-Galactose
type: Species

269608
stoichiometry: 1.0
species: 178398
type: SpeciesReference

196308
value: -1000.0
type: LocalParameter

157581
stoichiometry: 1.0
species: 178085
type: SpeciesReference

266765
stoichiometry: 1.0
species: 179159
type: SpeciesReference

209236
stoichiometry: 1.0
species: 178743
type: SpeciesReference

273523
stoichiometry: 1.0
species: 178038
type: SpeciesReference

194474
value: 0.0
type: LocalParameter

178604
notes: FORMULA: C6H12O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: beta-D-Galactose
type: Species

178603
notes: FORMULA: C6H11O9P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: alpha-D-Galactose-1-phosphate
type: Species

196307
value: 0.0
type: LocalParameter

179495
notes: FORMULA: C24H36N7O17P3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Propanoyl-CoA
type: Species

187885
value: 1000.0
type: LocalParameter

195140
value: 1000.0
type: LocalParameter

193645
value: 0.0
type: LocalParameter

260558
stoichiometry: 1.0
species: 179241
type: SpeciesReference

174734
stoichiometry: 1.0
species: 178283
type: SpeciesReference

305785
stoichiometry: 1.0
species: 178016
type: SpeciesReference

180689
stoichiometry: 1.0
species: 178737
type: SpeciesReference

194475
value: 1000.0
type: LocalParameter

182573
stoichiometry: 1.0
species: 178191
type: SpeciesReference

178602
notes: FORMULA: C6H11O9P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: alpha-D-Galactose-1-phosphate
type: Species

187882
value: -1000.0
type: LocalParameter

182574
reactant: 240316
product: 240352
name: gluconokinase
product: 240328
fast: false
reversible: false
reactant: 240304
product: 240340
notes: GENE_ASSOCIATION: ( b4268 or b3437 ) SUBSYSTEM: Alternate Carbon Metabolism
kinetic law: 240364
type: Reaction

194476
stoichiometry: 1.0
species: 178307
type: SpeciesReference

196305
value: 0.0
type: LocalParameter

194477
value: 0.0
type: LocalParameter

178601
notes: FORMULA: C6H11O9P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: alpha-D-Galactose-1-phosphate
type: Species

201183
stoichiometry: 1.0
species: 178737
type: SpeciesReference

271466
stoichiometry: 1.0
species: 178360
type: SpeciesReference

252016
stoichiometry: 1.0
species: 179167
type: SpeciesReference

160744
stoichiometry: 1.0
species: 179171
type: SpeciesReference

179497
notes: FORMULA: C10H11N5O17P4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Guanosine-3-5-bis-diphosphate
type: Species

300610
stoichiometry: 1.0
species: 178743
type: SpeciesReference

181079
reactant: 173620
name: Amylomaltase maltotetraose
product: 173632
reversible: false
type: Reaction
reactant: 173608
product: 173644
fast: false
notes: GENE_ASSOCIATION: b3416 SUBSYSTEM: Alternate Carbon Metabolism
kinetic law: 173656

196315
value: 0.0
type: LocalParameter

194467
value: 0.0
type: LocalParameter

182727
kinetic law: 243510
reactant: 243462
name: 3 hydroxyacyl CoA dehydrogenase 3 oxooctanoyl CoA
notes: GENE_ASSOCIATION: ( b2341 or b3846 ) SUBSYSTEM: Membrane Lipid Metabolism
product: 243474
reversible: false
reactant: 243449
product: 243498
fast: false
product: 243486
type: Reaction

188367
value: 0.0
type: LocalParameter

195858
value: 1000.0
type: LocalParameter

212096
stoichiometry: 1.0
species: 177472
type: SpeciesReference

179487
notes: FORMULA: C3H6O
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Propanal
type: Species

218421
stoichiometry: 1.0
species: 179199
type: SpeciesReference

182580
notes: GENE_ASSOCIATION: b0049 SUBSYSTEM: Nucleotide Salvage Pathway
fast: false
product: 240472
type: Reaction
reversible: false
reactant: 240448
kinetic law: 240496
product: 240484
name: Gp4G hydrolase
reactant: 240460

222740
stoichiometry: 1.0
species: 178173
type: SpeciesReference

195361
value: 0.0
type: LocalParameter

296289
stoichiometry: 1.0
species: 178673
type: SpeciesReference

186285
value: 0.0
type: LocalParameter

160961
stoichiometry: 1.0
species: 179171
type: SpeciesReference

187662
value: 0.0
type: LocalParameter

247210
stoichiometry: 1.0
species: 179597
type: SpeciesReference

194466
value: 0.0
type: LocalParameter

188368
value: 0.0
type: LocalParameter

180687
kinetic law: 164631
product: 164619
reactant: 164607
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: acetaldehyde transport via diffusion extracellular to periplasm
type: Reaction

284413
stoichiometry: 1.0
species: 179261
type: SpeciesReference

211674
stoichiometry: 1.0
species: 178737
type: SpeciesReference

278600
stoichiometry: 1.0
species: 178016
type: SpeciesReference

187661
value: 1000.0
type: LocalParameter

248456
stoichiometry: 1.0
species: 178799
type: SpeciesReference

186286
value: 0.0
type: LocalParameter

179489
notes: FORMULA: C3H6O
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Propanal
type: Species

196312
value: 0.0
type: LocalParameter

165695
stoichiometry: 1.0
species: 178016
type: SpeciesReference

195363
value: 0.0
type: LocalParameter

193648
value: 0.0
type: LocalParameter

194040
value: 0.0
type: LocalParameter

214028
stoichiometry: 1.0
species: 178044
type: SpeciesReference

188366
value: 0.0
type: LocalParameter

194468
value: 0.0
type: LocalParameter

196314
value: 0.0
type: LocalParameter

196313
stoichiometry: 1.0
species: 178304
type: SpeciesReference

193649
value: 1000.0
type: LocalParameter

195362
value: 0.0
type: LocalParameter

249383
stoichiometry: 1.0
species: 178816
type: SpeciesReference

224244
stoichiometry: 2.0
species: 178743
type: SpeciesReference

186288
value: 1000.0
type: LocalParameter

196739
value: 0.0
type: LocalParameter

187668
value: 0.0
type: LocalParameter

194042
value: 1000.0
type: LocalParameter

196310
value: 1000.0
type: LocalParameter

180684
reactant: 164522
product: 164571
reactant: 164546
notes: GENE_ASSOCIATION: ( b0351 or b1241 ) SUBSYSTEM: Pyruvate Metabolism
product: 164583
type: Reaction
reactant: 164534
fast: false
name: acetaldehyde dehydrogenase acetylating
product: 164559
reversible: true
kinetic law: 164595

195855
value: 0.0
type: LocalParameter

168232
stoichiometry: 1.0
species: 178743
type: SpeciesReference

266547
stoichiometry: 1.0
species: 179501
type: SpeciesReference

187666
value: 1000.0
type: LocalParameter

181075
kinetic law: 173536
reactant: 173488
reactant: 173500
name: anhydrous N Acetylmuramyl tetrapeptide L D carboxypeptidase
type: Reaction
product: 173512
product: 173524
notes: GENE_ASSOCIATION: b1192 SUBSYSTEM: Murein Recycling
fast: false
reversible: false

194041
value: -1000.0
type: LocalParameter

262381
stoichiometry: 1.0
species: 179018
type: SpeciesReference

195856
value: 0.0
type: LocalParameter

180681
kinetic law: 164510
product: 164498
reactant: 164486
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: acetoacetate transport via diffusion extracellular to periplasm
type: Reaction

179041
stoichiometry: 1.0
species: 178164
type: SpeciesReference

187665
value: -1000.0
type: LocalParameter

181076
stoichiometry: 1.0
species: 179171
type: SpeciesReference

210432
stoichiometry: 1.0
species: 179169
type: SpeciesReference

194044
value: 0.0
type: LocalParameter

306411
stoichiometry: 1.0
species: 180122
type: SpeciesReference

282110
stoichiometry: 1.0
species: 178085
type: SpeciesReference

195857
stoichiometry: 1.0
species: 178737
type: SpeciesReference

220545
stoichiometry: 0.6126
species: 178679
type: SpeciesReference

287030
stoichiometry: 1.0
species: 178737
type: SpeciesReference

187664
value: 0.0
type: LocalParameter

182724
fast: false
type: Reaction
reactant: 243388
reactant: 243376
product: 243401
product: 243425
product: 243413
name: 3 hydroxyacyl CoA dehydrogenase 3 oxohexanoyl CoA
kinetic law: 243437
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
reversible: false

196738
value: 0.0
type: LocalParameter

233498
stoichiometry: 1.0
species: 178627
type: SpeciesReference

194043
stoichiometry: 1.0
species: 178745
type: SpeciesReference

181077
product: 173584
name: Amylomaltase maltotriose
reversible: false
type: Reaction
reactant: 173548
kinetic law: 173596
notes: GENE_ASSOCIATION: b3416 SUBSYSTEM: Alternate Carbon Metabolism
reactant: 173560
product: 173572
fast: false

270780
stoichiometry: 1.0
species: 178798
type: SpeciesReference

193095
value: 0.0
type: LocalParameter

191458
value: 0.0
type: LocalParameter

197375
value: 0.0
type: LocalParameter

194046
value: -1000.0
type: LocalParameter

196520
value: 0.0
type: LocalParameter

203830
stoichiometry: 1.0
species: 178347
type: SpeciesReference

202679
stoichiometry: 1.0
species: 177189
type: SpeciesReference

237392
stoichiometry: 1.0
species: 179888
type: SpeciesReference

270368
stoichiometry: 1.0
species: 178088
type: SpeciesReference

275864
stoichiometry: 1.0
species: 178173
type: SpeciesReference

189752
value: 0.0
type: LocalParameter

183954
reversible: false
kinetic law: 272905
type: Reaction
notes: GENE_ASSOCIATION: b2032 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
product: 272869
product: 272881
product: 272893
fast: false
name: glucosyltransferase I LPS O16 antigen biosynthesis
reactant: 272845
reactant: 272857

225403
stoichiometry: 1.0
species: 179463
type: SpeciesReference

197374
stoichiometry: 1.0
species: 178283
type: SpeciesReference

181630
kinetic law: 211734
product: 211722
product: 211710
reactant: 211698
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
fast: false
reversible: true
name: 3 hydroxyacyl CoA dehydratase 3 hydroxyhexanoyl CoA
type: Reaction

194045
value: 0.0
type: LocalParameter

181071
reactant: 173367
type: Reaction
fast: false
reactant: 173379
kinetic law: 173416
name: anhydrous N Acetylmuramyl tripeptide amidase
notes: GENE_ASSOCIATION: b0110 SUBSYSTEM: Murein Recycling
product: 173391
reversible: false
product: 173404

223699
stoichiometry: 1.0
species: 178743
type: SpeciesReference

196736
value: 0.0
type: LocalParameter

285653
stoichiometry: 1.0
species: 178743
type: SpeciesReference

195369
value: 1000.0
type: LocalParameter

265388
stoichiometry: 1.0
species: 178173
type: SpeciesReference

190291
value: 1000.0
type: LocalParameter

249179
stoichiometry: 1.0
species: 178813
type: SpeciesReference

195851
value: 1000.0
type: LocalParameter

265906
stoichiometry: 1.0
species: 178016
type: SpeciesReference

227152
stoichiometry: 1.0
species: 178016
type: SpeciesReference

308760
stoichiometry: 1.0
species: 180233
type: SpeciesReference

197373
value: 1000.0
type: LocalParameter

181631
kinetic law: 211784
product: 211772
product: 211760
reactant: 211747
notes: GENE_ASSOCIATION: ( b2341 or b3846 ) SUBSYSTEM: Membrane Lipid Metabolism
fast: false
reversible: true
name: 3 hydroxyacyl CoA dehydratase 3 hydroxyoctanoyl CoA
type: Reaction

194049
value: 0.0
type: LocalParameter

287249
stoichiometry: 1.0
species: 179167
type: SpeciesReference

170839
stoichiometry: 1.0
species: 178743
type: SpeciesReference

196733
value: 0.0
type: LocalParameter

274045
stoichiometry: 1.0
species: 177574
type: SpeciesReference

159732
stoichiometry: 1.0
species: 177758
type: SpeciesReference

190294
value: 0.0
type: LocalParameter

197372
value: 0.0
type: LocalParameter

181073
reversible: false
kinetic law: 173476
reactant: 173440
type: Reaction
product: 173464
fast: false
reactant: 173428
name: anhydrous N Acetylmuramyl tetrapeptide amidase
product: 173452
notes: GENE_ASSOCIATION: b0110 SUBSYSTEM: Murein Recycling

181632
kinetic law: 211832
product: 211820
product: 211808
reactant: 211796
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
fast: false
reversible: true
name: 3 hydroxyacyl CoA dehydratase 3 hydroxydecanoyl CoA
type: Reaction

197598
value: 0.0
type: LocalParameter

187669
value: 0.0
type: LocalParameter

162144
stoichiometry: 1.0
species: 177911
type: SpeciesReference

194048
value: 1000.0
type: LocalParameter

196734
value: 1000.0
type: LocalParameter

195853
value: 0.0
type: LocalParameter

183953
product: 272809
kinetic law: 272833
reactant: 272785
reactant: 272773
type: Reaction
name: galactofuranosyltransferase LPS O16 antigen biosynthesis
reversible: false
fast: false
product: 272797
product: 272821
notes: GENE_ASSOCIATION: b2034 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling

265172
stoichiometry: 1.0
species: 177172
type: SpeciesReference

196730
value: 0.0
type: LocalParameter

197597
value: 1000.0
type: LocalParameter

244244
stoichiometry: 1.0
species: 178752
type: SpeciesReference

296896
stoichiometry: 1.0
species: 179171
type: SpeciesReference

190297
value: 0.0
type: LocalParameter

193099
value: -1000.0
type: LocalParameter

197371
value: 0.0
type: LocalParameter

190082
value: 0.0
type: LocalParameter

183950
product: 272712
reactant: 272676
kinetic law: 272725
reversible: false
notes: GENE_ASSOCIATION: b2033 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
name: rhamanosyl N acetylglucosamyl undecaprenyl diphosphate O acetyltransferase LPS O16 antigen biosynthesis
type: Reaction
product: 272700
fast: false
reactant: 272688

190296
stoichiometry: 1.0
species: 178698
type: SpeciesReference

265785
stoichiometry: 1.0
species: 179191
type: SpeciesReference

188363
value: 1000.0
type: LocalParameter

195364
value: 1000.0
type: LocalParameter

257799
stoichiometry: 1.0
species: 178278
type: SpeciesReference

183951
kinetic law: 272761
product: 272749
reactant: 272737
notes: GENE_ASSOCIATION: b2037 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
fast: false
reversible: false
name: O16 antigen flippase cytoplasm to periplasm
type: Reaction

297670
stoichiometry: 1.0
species: 178743
type: SpeciesReference

266317
stoichiometry: 1.0
species: 178410
type: SpeciesReference

186281
value: 1000.0
type: LocalParameter

196732
value: 0.0
type: LocalParameter

305338
stoichiometry: 1.0
species: 178601
type: SpeciesReference

236678
stoichiometry: 1.0
species: 178673
type: SpeciesReference

195367
value: 0.0
type: LocalParameter

305026
stoichiometry: 1.0
species: 179169
type: SpeciesReference

186000
value: 0.0
type: LocalParameter

195368
value: 0.0
type: LocalParameter

188361
value: 0.0
type: LocalParameter

197594
value: 0.0
type: LocalParameter

195366
value: 0.0
type: LocalParameter

190298
value: 0.0
type: LocalParameter

193098
value: 0.0
type: LocalParameter

186283
value: 0.0
type: LocalParameter

158203
stoichiometry: 1.0
species: 179501
type: SpeciesReference

190083
value: 0.0
type: LocalParameter

186001
value: 0.0
type: LocalParameter

188362
value: 0.0
type: LocalParameter

228386
stoichiometry: 1.0
species: 179627
type: SpeciesReference

166638
stoichiometry: 1.0
species: 178511
type: SpeciesReference

229339
stoichiometry: 1.0
species: 178569
type: SpeciesReference

190063
value: 0.0
type: LocalParameter

187874
stoichiometry: 1.0
species: 179167
type: SpeciesReference

196528
value: 0.0
type: LocalParameter

176928
stoichiometry: 1.0
species: 178673
type: SpeciesReference

244533
stoichiometry: 1.0
species: 179457
type: SpeciesReference

180249
kinetic law: 155823
product: 155811
reactant: 155799
notes: GENE_ASSOCIATION: SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: false
name: 1 2 diacylglycerol transport via flipping periplasm to cytoplasm n C141
type: Reaction

197368
value: 1000.0
type: LocalParameter

251437
stoichiometry: 1.0
species: 178737
type: SpeciesReference

181628
kinetic law: 211638
product: 211626
reactant: 211614
notes: GENE_ASSOCIATION: b3792 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
fast: false
reversible: false
name: enterobacterial common antigen transferase flippase cytoplasm to periplasm
type: Reaction

290355
stoichiometry: 1.0
species: 179285
type: SpeciesReference

191441
value: 0.0
type: LocalParameter

286088
stoichiometry: 1.0
species: 179485
type: SpeciesReference

189746
value: 1000.0
type: LocalParameter

190064
stoichiometry: 1.0
species: 178698
type: SpeciesReference

194892
value: 0.0
type: LocalParameter

187875
value: 0.0
type: LocalParameter

175773
stoichiometry: 1.0
species: 178743
type: SpeciesReference

197369
value: 0.0
type: LocalParameter

181627
reactant: 211554
notes: GENE_ASSOCIATION: ( b3793 and b3785 ) SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
product: 211578
reversible: false
kinetic law: 211602
reactant: 211542
product: 211590
fast: false
type: Reaction
name: enterobacterial common antigen polymerase periplasm
product: 211566

187876
value: 0.0
type: LocalParameter

187877
value: 1000.0
type: LocalParameter

196751
value: 0.0
type: LocalParameter

284993
stoichiometry: 1.0
species: 178745
type: SpeciesReference

181626
reversible: false
name: enterobacterial common antigen polymerase periplasm
product: 211518
type: Reaction
kinetic law: 211530
notes: GENE_ASSOCIATION: ( b3793 and b3785 ) SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
fast: false
reactant: 211482
product: 211506
reactant: 211470
product: 211494

197580
value: 0.0
type: LocalParameter

190062
value: 0.0
type: LocalParameter

194890
value: 1000.0
type: LocalParameter

274277
stoichiometry: 1.0
species: 177577
type: SpeciesReference

288698
stoichiometry: 1.0
species: 178173
type: SpeciesReference

181625
type: Reaction
product: 211422
kinetic law: 211458
fast: false
reactant: 211410
product: 211446
name: enterobacterial common antigen polymerase periplasm
product: 211434
reversible: false
notes: GENE_ASSOCIATION: ( b3793 and b3785 ) SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling

189749
value: 0.0
type: LocalParameter

233281
stoichiometry: 1.0
species: 178606
type: SpeciesReference

245750
stoichiometry: 1.0
species: 178743
type: SpeciesReference

197581
value: 0.0
type: LocalParameter

183969
kinetic law: 273390
product: 273377
reactant: 273365
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: Octanoate transport via diffusion extracellular to periplasm
type: Reaction

173584
stoichiometry: 1.0
species: 178950
type: SpeciesReference

291512
stoichiometry: 1.0
species: 179463
type: SpeciesReference

207071
stoichiometry: 2.0
species: 179169
type: SpeciesReference

191445
value: 0.0
type: LocalParameter

282773
stoichiometry: 1.0
species: 178755
type: SpeciesReference

230640
stoichiometry: 1.0
species: 178690
type: SpeciesReference

197364
value: 0.0
type: LocalParameter

194896
stoichiometry: 1.0
species: 178307
type: SpeciesReference

181624
fast: false
kinetic law: 211398
type: Reaction
product: 211386
product: 211374
reactant: 211338
reactant: 211350
reversible: false
name: enterobacterial common antigen x4 O antigen ligase periplasm
notes: GENE_ASSOCIATION: b3622 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
product: 211362

187126
stoichiometry: 1.0
species: 178737
type: SpeciesReference

237160
stoichiometry: 1.0
species: 178672
type: SpeciesReference

196523
value: 0.0
type: LocalParameter

308994
stoichiometry: 1.0
species: 179463
type: SpeciesReference

202159
stoichiometry: 1.0
species: 178338
type: SpeciesReference

279578
stoichiometry: 1.0
species: 178507
type: SpeciesReference

214513
stoichiometry: 1.0
species: 178212
type: SpeciesReference

189742
value: 0.0
type: LocalParameter

183968
kinetic law: 273353
product: 273341
reactant: 273329
notes: GENE_ASSOCIATION: b2344 SUBSYSTEM: Transport Outer Membrane
fast: false
reversible: false
name: Octadecenoate n C181 transport via facilitated irreversible diffusion extracellular to periplasm
type: Reaction

190069
value: 0.0
type: LocalParameter

258873
stoichiometry: 2.0
species: 178745
type: SpeciesReference

180246
kinetic law: 155787
product: 155774
reactant: 155762
notes: GENE_ASSOCIATION: SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: false
name: 1 2 diacylglycerol transport via flipping periplasm to cytoplasm n C140
type: Reaction

197365
value: 0.0
type: LocalParameter

196522
value: 0.0
type: LocalParameter

194897
value: 0.0
type: LocalParameter

181623
kinetic law: 211326
product: 211314
reactant: 211302
notes: GENE_ASSOCIATION: SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
fast: false
reversible: false
name: enterobacterial common antigen x4 core oligosaccharide lipid A transport periplasm to extracellular
type: Reaction

188380
value: 0.0
type: LocalParameter

195159
value: -1000.0
type: LocalParameter

194893
value: 0.0
type: LocalParameter

196526
value: 1000.0
type: LocalParameter

158079
stoichiometry: 1.0
species: 177441
type: SpeciesReference

302001
stoichiometry: 1.0
species: 179874
type: SpeciesReference

246705
stoichiometry: 1.0
species: 179173
type: SpeciesReference

189743
value: 0.0
type: LocalParameter

192820
value: 0.0
type: LocalParameter

191443
value: 1000.0
type: LocalParameter

190066
value: 1000.0
type: LocalParameter

181622
product: 211266
product: 211278
fast: false
reactant: 211242
reactant: 211230
type: Reaction
reactant: 211254
kinetic law: 211290
reversible: false
notes: GENE_ASSOCIATION: b1288 SUBSYSTEM: Cell Envelope Biosynthesis
name: enoyl acyl carrier protein reductase NADPH n C80

197366
value: 0.0
type: LocalParameter

195158
value: 0.0
type: LocalParameter

194894
value: 0.0
type: LocalParameter

226909
stoichiometry: 2.0
species: 178518
type: SpeciesReference

277231
stoichiometry: 1.0
species: 178278
type: SpeciesReference

192821
value: -1000.0
type: LocalParameter

191442
value: -1000.0
type: LocalParameter

255401
stoichiometry: 1.0
species: 178118
type: SpeciesReference

194895
value: 1000.0
type: LocalParameter

181621
reversible: false
name: enoyl acyl carrier protein reductase NADH n C80
type: Reaction
reactant: 211157
notes: GENE_ASSOCIATION: b1288 SUBSYSTEM: Cell Envelope Biosynthesis
product: 211206
kinetic law: 211218
reactant: 211182
reactant: 211169
product: 211194
fast: false

193653
value: 0.0
type: LocalParameter

195156
value: 0.0
type: LocalParameter

186493
value: 0.0
type: LocalParameter

213353
stoichiometry: 1.0
species: 177628
type: SpeciesReference

180240
stoichiometry: 1.0
species: 178743
type: SpeciesReference

279361
stoichiometry: 1.0
species: 178173
type: SpeciesReference

283353
stoichiometry: 1.0
species: 178739
type: SpeciesReference

224015
stoichiometry: 1.0
species: 178737
type: SpeciesReference

288325
stoichiometry: 1.0
species: 179539
type: SpeciesReference

194484
value: 0.0
type: LocalParameter

309490
stoichiometry: 1.0
species: 179169
type: SpeciesReference

305350
stoichiometry: 1.0
species: 180020
type: SpeciesReference

193651
value: 0.0
type: LocalParameter

175555
stoichiometry: 1.0
species: 178743
type: SpeciesReference

179481
notes: FORMULA: C3H5O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Propionate-n-C30
type: Species

194898
value: 0.0
type: LocalParameter

195154
value: -1000.0
type: LocalParameter

192824
value: 1000.0
type: LocalParameter

193655
value: 1000.0
type: LocalParameter

180243
kinetic law: 155750
product: 155738
reactant: 155726
notes: GENE_ASSOCIATION: SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: false
name: 1 2 diacylglycerol transport via flipping periplasm to cytoplasm n C120
type: Reaction

274484
stoichiometry: 1.0
species: 179573
type: SpeciesReference

186491
value: 1000.0
type: LocalParameter

259138
stoichiometry: 1.0
species: 178962
type: SpeciesReference

180242
notes: FORMULA:
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: CMC
type: Species

267932
stoichiometry: 1.0
species: 179175
type: SpeciesReference

251847
stoichiometry: 1.0
species: 178745
type: SpeciesReference

195155
value: 1000.0
type: LocalParameter

194899
value: -1000.0
type: LocalParameter

193654
value: -1000.0
type: LocalParameter

159140
stoichiometry: 1.0
species: 177616
type: SpeciesReference

182589
fast: false
kinetic law: 240713
notes: GENE_ASSOCIATION: b3449 SUBSYSTEM: Glycerophospholipid Metabolism
name: Glycerophosphodiester phosphodiesterase Glycerophosphoethanolamine
product: 240677
type: Reaction
product: 240701
product: 240689
reactant: 240664
reversible: false
reactant: 240652

186490
stoichiometry: 1.0
species: 179323
type: SpeciesReference

263020
stoichiometry: 1.0
species: 178739
type: SpeciesReference

182585
stoichiometry: 1.0
species: 178193
type: SpeciesReference

305773
stoichiometry: 1.0
species: 179998
type: SpeciesReference

193657
value: 0.0
type: LocalParameter

209223
stoichiometry: 1.0
species: 178581
type: SpeciesReference

206563
stoichiometry: 1.0
species: 178395
type: SpeciesReference

187870
value: -1000.0
type: LocalParameter

182586
product: 240616
kinetic law: 240640
reactant: 240592
reversible: false
notes: GENE_ASSOCIATION: b2239 SUBSYSTEM: Glycerophospholipid Metabolism
product: 240604
product: 240628
reactant: 240580
type: Reaction
fast: false
name: Glycerophosphodiester phosphodiesterase Glycerophosphocholine

194488
value: 0.0
type: LocalParameter

201196
stoichiometry: 1.0
species: 178749
type: SpeciesReference

192827
value: 0.0
type: LocalParameter

195153
value: 0.0
type: LocalParameter

179485
notes: FORMULA: C3H6O
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Propanal
type: Species

252004
stoichiometry: 1.0
species: 178840
type: SpeciesReference

186496
value: -1000.0
type: LocalParameter

160732
stoichiometry: 1.0
species: 177770
type: SpeciesReference

194489
value: 0.0
type: LocalParameter

298610
stoichiometry: 1.0
species: 179815
type: SpeciesReference

271478
stoichiometry: 1.0
species: 178737
type: SpeciesReference

182583
reversible: false
kinetic law: 240568
product: 240556
fast: false
notes: GENE_ASSOCIATION: b3449 SUBSYSTEM: Glycerophospholipid Metabolism
name: Glycerophosphodiester phosphodiesterase Glycerophosphocholine
reactant: 240508
product: 240532
type: Reaction
product: 240544
reactant: 240520

195150
value: 1000.0
type: LocalParameter

194485
value: 0.0
type: LocalParameter

193659
value: 0.0
type: LocalParameter

186495
value: 0.0
type: LocalParameter

266753
stoichiometry: 1.0
species: 179157
type: SpeciesReference

187872
value: 1000.0
type: LocalParameter

209819
stoichiometry: 1.0
species: 179171
type: SpeciesReference

273511
stoichiometry: 1.0
species: 179277
type: SpeciesReference

194486
value: 1000.0
type: LocalParameter

181629
kinetic law: 211686
product: 211674
product: 211662
reactant: 211650
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
fast: false
reversible: true
name: 3 hydroxyacyl CoA dehydratase 3 hydroxybutanoyl CoA
type: Reaction

195151
value: 0.0
type: LocalParameter

260545
stoichiometry: 1.0
species: 179169
type: SpeciesReference

179483
notes: FORMULA: C3H5O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Propionate-n-C30
type: Species

187873
value: 0.0
type: LocalParameter

202461
stoichiometry: 1.0
species: 177177
type: SpeciesReference

188377
value: 1000.0
type: LocalParameter

248468
stoichiometry: 1.0
species: 179463
type: SpeciesReference

179477
notes: FORMULA: C9H16NO5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: R-Pantothenate
type: Species

195848
value: 0.0
type: LocalParameter

186274
value: 1000.0
type: LocalParameter

278612
stoichiometry: 1.0
species: 178517
type: SpeciesReference

196300
value: 0.0
type: LocalParameter

264543
stoichiometry: 1.0
species: 178257
type: SpeciesReference

249395
stoichiometry: 1.0
species: 179167
type: SpeciesReference

195849
value: 0.0
type: LocalParameter

195374
value: 1000.0
type: LocalParameter

224232
stoichiometry: 1.0
species: 179503
type: SpeciesReference

203391
stoichiometry: 1.0
species: 178314
type: SpeciesReference

196301
value: 0.0
type: LocalParameter

274749
stoichiometry: 1.0
species: 179501
type: SpeciesReference

202897
stoichiometry: 1.0
species: 178050
type: SpeciesReference

196303
value: 1000.0
type: LocalParameter

182715
kinetic law: 243256
product: 243244
reactant: 243232
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: hydrogen transport via diffusion extracellular to periplasm
type: Reaction

186272
value: 0.0
type: LocalParameter

195846
value: 0.0
type: LocalParameter

240520
stoichiometry: 1.0
species: 178737
type: SpeciesReference

179475
notes: FORMULA: C9H16NO5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: R-Pantothenate
type: Species

186498
value: 1000.0
type: LocalParameter

284401
stoichiometry: 1.0
species: 178745
type: SpeciesReference

309274
stoichiometry: 0.04273504
species: 180242
type: SpeciesReference

187651
value: 0.0
type: LocalParameter

241357
stoichiometry: 1.0
species: 178173
type: SpeciesReference

300622
stoichiometry: 1.0
species: 179501
type: SpeciesReference

174529
stoichiometry: 1.0
species: 178248
type: SpeciesReference

195373
value: 0.0
type: LocalParameter

217044
stoichiometry: 1.0
species: 178738
type: SpeciesReference

182592
product: 240765
kinetic law: 240790
fast: false
product: 240752
reactant: 240726
product: 240778
reversible: false
type: Reaction
notes: GENE_ASSOCIATION: b2239 SUBSYSTEM: Glycerophospholipid Metabolism
reactant: 240739
name: Glycerophosphodiester phosphodiesterase Glycerophosphoethanolamine

206129
stoichiometry: 1.0
species: 178205
type: SpeciesReference

186273
stoichiometry: 1.0
species: 178737
type: SpeciesReference

157569
stoichiometry: 1.0
species: 178750
type: SpeciesReference

160310
stoichiometry: 1.0
species: 179467
type: SpeciesReference

187650
value: 1000.0
type: LocalParameter

215409
stoichiometry: 1.0
species: 178480
type: SpeciesReference

195372
value: 0.0
type: LocalParameter

211662
stoichiometry: 1.0
species: 178175
type: SpeciesReference

180699
notes: GENE_ASSOCIATION: ( b0185 and b2316 and b3255 and b3256 ) SUBSYSTEM: Membrane Lipid Metabolism
reactant: 164811
product: 164883
name: acetyl CoA carboxylase
reactant: 164823
kinetic law: 164895
reactant: 164835
reversible: false
product: 164847
fast: false
product: 164871
type: Reaction
product: 164859

235701
stoichiometry: 1.0
species: 178745
type: SpeciesReference

190288
value: 0.0
type: LocalParameter

206346
stoichiometry: 1.0
species: 179501
type: SpeciesReference

299722
stoichiometry: 1.0
species: 179819
type: SpeciesReference

187653
value: 0.0
type: LocalParameter

186278
value: 0.0
type: LocalParameter

266110
stoichiometry: 1.0
species: 179105
type: SpeciesReference

180693
reversible: false
kinetic law: 164727
name: acetyl CoAanthranilate acetyltransferase
fast: false
product: 164715
notes: GENE_ASSOCIATION: b1463 SUBSYSTEM: Tyrosine Tryptophan and Phenylalanine Metabolism
reactant: 164691
product: 164703
reactant: 164679
type: Reaction

195844
value: 1000.0
type: LocalParameter

195371
value: 0.0
type: LocalParameter

190700
value: 0.0
type: LocalParameter

210420
stoichiometry: 1.0
species: 178743
type: SpeciesReference

181088
stoichiometry: 1.0
species: 178685
type: SpeciesReference

186279
value: 0.0
type: LocalParameter

182712
kinetic law: 243220
product: 243208
reactant: 243196
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: h2s transport via diffusion extracellular to periplasm
type: Reaction

217720
stoichiometry: 1.0
species: 178902
type: SpeciesReference

280510
stoichiometry: 1.0
species: 179463
type: SpeciesReference

179054
stoichiometry: 1.0
species: 179229
type: SpeciesReference

220533
stoichiometry: 0.2632
species: 178673
type: SpeciesReference

195845
stoichiometry: 1.0
species: 178306
type: SpeciesReference

287042
stoichiometry: 1.0
species: 179459
type: SpeciesReference

259811
stoichiometry: 1.0
species: 178984
type: SpeciesReference

194031
value: 1000.0
type: LocalParameter

181089
reactant: 173899
notes: GENE_ASSOCIATION: b0774 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
reversible: true
product: 173924
type: Reaction
name: adenosylmethionine 8 amino 7 oxononanoate transaminase
kinetic law: 173949
product: 173937
reactant: 173911
fast: false

270792
stoichiometry: 1.0
species: 179463
type: SpeciesReference

186276
value: 0.0
type: LocalParameter

187655
value: 1000.0
type: LocalParameter

195842
value: 0.0
type: LocalParameter

179479
notes: FORMULA: C3H5O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Propionate-n-C30
type: Species

213136
stoichiometry: 1.0
species: 177329
type: SpeciesReference

180696
fast: false
reactant: 164751
type: Reaction
reactant: 164739
product: 164775
product: 164787
notes: GENE_ASSOCIATION: b1993 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
reversible: false
reactant: 164763
name: Adenosyl cobinamide phosphate guanyltransferase
kinetic law: 164799

194030
value: 0.0
type: LocalParameter

157351
stoichiometry: 1.0
species: 179501
type: SpeciesReference

187654
value: 0.0
type: LocalParameter

266535
stoichiometry: 1.0
species: 179463
type: SpeciesReference

168220
stoichiometry: 1.0
species: 178085
type: SpeciesReference

282123
stoichiometry: 1.0
species: 179451
type: SpeciesReference

175109
stoichiometry: 2.0
species: 178131
type: SpeciesReference

181087
product: 173874
type: Reaction
name: N acetyl D mannosamine kinase
reactant: 173838
product: 173850
fast: false
reversible: false
reactant: 173825
product: 173862
kinetic law: 173886
notes: GENE_ASSOCIATION: b3222 SUBSYSTEM: Alternate Carbon Metabolism

196530
value: 0.0
type: LocalParameter

227140
stoichiometry: 1.0
species: 178737
type: SpeciesReference

308772
stoichiometry: 1.0
species: 178016
type: SpeciesReference

187658
value: 0.0
type: LocalParameter

197587
value: 0.0
type: LocalParameter

296450
stoichiometry: 1.0
species: 179153
type: SpeciesReference

265918
stoichiometry: 1.0
species: 178743
type: SpeciesReference

197361
value: 0.0
type: LocalParameter

266329
stoichiometry: 1.0
species: 179177
type: SpeciesReference

260076
stoichiometry: 1.0
species: 178739
type: SpeciesReference

194037
value: 1000.0
type: LocalParameter

196745
value: 0.0
type: LocalParameter

170827
stoichiometry: 1.0
species: 178016
type: SpeciesReference

274057
stoichiometry: 2.0
species: 178173
type: SpeciesReference

196531
value: -1000.0
type: LocalParameter

244751
stoichiometry: 1.0
species: 178780
type: SpeciesReference

181085
kinetic law: 173813
product: 173801
reactant: 173789
notes: GENE_ASSOCIATION: b3223 SUBSYSTEM: Alternate Carbon Metabolism
fast: false
reversible: true
name: N acetylmannosamine 6 phosphate epimerase
type: Reaction

191449
value: 1000.0
type: LocalParameter

194035
value: -1000.0
type: LocalParameter

181620
reactant: 211106
type: Reaction
name: enoyl acyl carrier protein reductase NADPH n C60
product: 211133
kinetic law: 211145
reactant: 211080
reversible: false
notes: GENE_ASSOCIATION: b1288 SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
product: 211119
reactant: 211093

187657
value: 0.0
type: LocalParameter

197360
value: 0.0
type: LocalParameter

290137
stoichiometry: 1.0
species: 177941
type: SpeciesReference

190281
value: 1000.0
type: LocalParameter

225608
stoichiometry: 2.0
species: 178532
type: SpeciesReference

183965
notes: GENE_ASSOCIATION: ( b4254 or b0273 ) SUBSYSTEM: Arginine and Proline Metabolism
kinetic law: 273281
reactant: 273233
fast: false
product: 273245
name: ornithine carbamoyltransferase
product: 273257
reversible: true
type: Reaction
reactant: 273220
product: 273269

195841
value: 0.0
type: LocalParameter

265160
stoichiometry: 1.0
species: 178998
type: SpeciesReference

188370
stoichiometry: 1.0
species: 178739
type: SpeciesReference

196746
value: 1000.0
type: LocalParameter

197589
value: 1000.0
type: LocalParameter

194034
value: 0.0
type: LocalParameter

196532
value: 1000.0
type: LocalParameter

191446
value: 0.0
type: LocalParameter

275876
stoichiometry: 1.0
species: 178283
type: SpeciesReference

183966
kinetic law: 273317
product: 273305
reactant: 273293
notes: GENE_ASSOCIATION: b2344 SUBSYSTEM: Transport Outer Membrane
fast: false
reversible: false
name: Octadecanoate transport via facilitated irreversible diffusion extracellular to periplasm
type: Reaction

188371
value: 1000.0
type: LocalParameter

203842
stoichiometry: 1.0
species: 178737
type: SpeciesReference

237380
stoichiometry: 1.0
species: 178673
type: SpeciesReference

187659
value: -1000.0
type: LocalParameter

245066
stoichiometry: 1.0
species: 178173
type: SpeciesReference

197588
value: 0.0
type: LocalParameter

197362
value: 1000.0
type: LocalParameter

194033
value: 0.0
type: LocalParameter

181083
notes: GENE_ASSOCIATION: b3416 SUBSYSTEM: Alternate Carbon Metabolism
product: 173752
reactant: 173740
fast: false
kinetic law: 173777
type: Reaction
name: Amylomaltase maltohexaose
reversible: false
reactant: 173728
product: 173764

232991
stoichiometry: 1.0
species: 178618
type: SpeciesReference

191447
value: 0.0
type: LocalParameter

249167
stoichiometry: 1.0
species: 178743
type: SpeciesReference

180690
kinetic law: 164667
product: 164655
reactant: 164643
notes: GENE_ASSOCIATION: s0001 SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: true
name: acetaldehyde reversible transport periplasm
type: Reaction

196748
value: 0.0
type: LocalParameter

188372
value: 0.0
type: LocalParameter

285641
stoichiometry: 1.0
species: 178016
type: SpeciesReference

265376
stoichiometry: 1.0
species: 177891
type: SpeciesReference

190287
value: 0.0
type: LocalParameter

305038
stoichiometry: 1.0
species: 180012
type: SpeciesReference

160106
stoichiometry: 1.0
species: 178739
type: SpeciesReference

196740
value: 1000.0
type: LocalParameter

190072
value: 0.0
type: LocalParameter

183960
kinetic law: 273086
product: 273074
reactant: 273062
notes: GENE_ASSOCIATION: s0001 SUBSYSTEM: Inorganic Ion Transport and Metabolism
fast: false
reversible: true
name: o2 transport via diffusion periplasm
type: Reaction

181081
notes: GENE_ASSOCIATION: b3416 SUBSYSTEM: Alternate Carbon Metabolism
name: Amylomaltase maltopentaose
reactant: 173668
reversible: false
type: Reaction
product: 173692
product: 173704
reactant: 173680
fast: false
kinetic law: 173716

276801
stoichiometry: 1.0
species: 179463
type: SpeciesReference

252668
stoichiometry: 1.0
species: 178746
type: SpeciesReference

195378
value: 0.0
type: LocalParameter

195379
value: 1000.0
type: LocalParameter

164317
stoichiometry: 1.0
species: 177930
type: SpeciesReference

186271
value: 0.0
type: LocalParameter

183961
stoichiometry: 2.0
species: 178173
type: SpeciesReference

282990
stoichiometry: 1.0
species: 178739
type: SpeciesReference

244232
stoichiometry: 1.0
species: 178751
type: SpeciesReference

224461
stoichiometry: 1.0
species: 178743
type: SpeciesReference

196742
value: 0.0
type: LocalParameter

195377
value: 0.0
type: LocalParameter

197585
value: 0.0
type: LocalParameter

296884
stoichiometry: 1.0
species: 178737
type: SpeciesReference

265773
stoichiometry: 2.0
species: 178743
type: SpeciesReference

162157
stoichiometry: 1.0
species: 178173
type: SpeciesReference

190284
value: 0.0
type: LocalParameter

183962
kinetic law: 273146
reversible: false
reactant: 273110
reactant: 273098
product: 273134
fast: false
type: Reaction
product: 273122
notes: GENE_ASSOCIATION: b1850 SUBSYSTEM: Pyruvate Metabolism
name: oxaloacetate decarboxylase

188375
value: 0.0
type: LocalParameter

304398
stoichiometry: 1.0
species: 179980
type: SpeciesReference

195376
value: 0.0
type: LocalParameter

258440
stoichiometry: 1.0
species: 178016
type: SpeciesReference

197584
value: 1000.0
type: LocalParameter

291909
stoichiometry: 1.0
species: 178016
type: SpeciesReference

196744
value: 0.0
type: LocalParameter

194038
value: 0.0
type: LocalParameter

214732
stoichiometry: 1.0
species: 178288
type: SpeciesReference

182718
kinetic law: 243292
product: 243280
reactant: 243268
notes: GENE_ASSOCIATION: s0001 SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: true
name: hydrogen transport diffusion periplasm
type: Reaction

183963
product: 273184
kinetic law: 273208
fast: false
reactant: 273172
reversible: false
product: 273196
name: 2 Oxobutanoate formate lyase
type: Reaction
reactant: 273159
notes: GENE_ASSOCIATION: ( ( ( b0902 and b0903 ) and b2579 ) or ( b0902 and b0903 ) or ( b0902 and b3114 ) ) SUBSYSTEM: Alternate Carbon Metabolism

188376
value: 0.0
type: LocalParameter

179249
notes: FORMULA: C29H55N2O8PRS
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Octadecanoyl-ACP-n-C180ACP
type: Species

194499
value: 0.0
type: LocalParameter

186224
stoichiometry: 1.0
species: 178232
type: SpeciesReference

179471
notes: FORMULA: C37H62N7O17P3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Palmitoyl-CoA-n-C160CoA
type: Species

197316
value: 0.0
type: LocalParameter

308027
stoichiometry: 1.0
species: 180173
type: SpeciesReference

225680
stoichiometry: 2.0
species: 178518
type: SpeciesReference

185584
value: 0.0
type: LocalParameter

289326
stoichiometry: 1.0
species: 179371
type: SpeciesReference

233257
stoichiometry: 1.0
species: 178737
type: SpeciesReference

245702
stoichiometry: 1.0
species: 179463
type: SpeciesReference

298815
stoichiometry: 1.0
species: 178743
type: SpeciesReference

205300
stoichiometry: 1.0
species: 177366
type: SpeciesReference

185436
value: -1000.0
type: LocalParameter

185434
value: 0.0
type: LocalParameter

186225
value: 1000.0
type: LocalParameter

197314
value: 0.0
type: LocalParameter

193623
value: 0.0
type: LocalParameter

194283
stoichiometry: 1.0
species: 179505
type: SpeciesReference

185435
value: 0.0
type: LocalParameter

188309
stoichiometry: 1.0
species: 178876
type: SpeciesReference

194497
value: 1000.0
type: LocalParameter

190705
value: 1000.0
type: LocalParameter

188305
value: 0.0
type: LocalParameter

196329
value: 0.0
type: LocalParameter

179473
notes: FORMULA: C9H16NO5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: R-Pantothenate
type: Species

214319
stoichiometry: 1.0
species: 178149
type: SpeciesReference

160720
stoichiometry: 1.0
species: 179173
type: SpeciesReference

185586
value: 0.0
type: LocalParameter

186227
value: 0.0
type: LocalParameter

197313
value: 1000.0
type: LocalParameter

265978
stoichiometry: 1.0
species: 178022
type: SpeciesReference

194060
value: 0.0
type: LocalParameter

282352
stoichiometry: 1.0
species: 179463
type: SpeciesReference

188306
value: 0.0
type: LocalParameter

185438
value: 1000.0
type: LocalParameter

222051
stoichiometry: 1.0
species: 178743
type: SpeciesReference

190708
value: 0.0
type: LocalParameter

206599
stoichiometry: 1.0
species: 178745
type: SpeciesReference

182966
kinetic law: 248577
product: 248565
reactant: 248553
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: L isoleucine transport via diffusion extracellular to periplasm
type: Reaction

199512
value: 0.0
type: LocalParameter

181002
stoichiometry: 2.0
species: 178743
type: SpeciesReference

174758
stoichiometry: 1.0
species: 178106
type: SpeciesReference

193621
value: 0.0
type: LocalParameter

181001
kinetic law: 171128
product: 171116
reactant: 171104
reactant: 171092
notes: GENE_ASSOCIATION: b1488 SUBSYSTEM: Murein Recycling
fast: false
reversible: false
name: D alanine D alanine dipeptidase
type: Reaction

185585
value: 0.0
type: LocalParameter

224824
stoichiometry: 1.0
species: 178173
type: SpeciesReference

203806
stoichiometry: 1.0
species: 179501
type: SpeciesReference

190016
value: 1000.0
type: LocalParameter

188307
value: -1000.0
type: LocalParameter

181003
reactant: 171140
product: 171176
product: 171212
fast: false
type: Reaction
product: 171200
product: 171188
reactant: 171164
reversible: false
reactant: 171152
kinetic law: 171224
notes: GENE_ASSOCIATION: ( ( b1487 and b1486 and b1485 and b1484 and b1483 ) or ( b3544 and b3543 and b3542 and b3541 and b3540 ) ) SUBSYSTEM: Transport Inner Membrane
name: D alanyl D alanine DalaDala transport via ABC system periplasm

186220
value: 0.0
type: LocalParameter

282701
stoichiometry: 1.0
species: 177523
type: SpeciesReference

182969
kinetic law: 248625
product: 248613
reactant: 248601
reactant: 248589
notes: GENE_ASSOCIATION: b4006 SUBSYSTEM: Purine and Pyrimidine Biosynthesis
fast: false
reversible: true
name: IMP cyclohydrolase
type: Reaction

244957
stoichiometry: 1.0
species: 178597
type: SpeciesReference

160563
stoichiometry: 1.0
species: 178743
type: SpeciesReference

167728
stoichiometry: 1.0
species: 177999
type: SpeciesReference

179245
notes: FORMULA: C19H35N2O8PRS
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Octanoyl-ACP-n-C80ACP
type: Species

185431
value: -1000.0
type: LocalParameter

186649
value: 0.0
type: LocalParameter

185580
value: 0.0
type: LocalParameter

297658
stoichiometry: 1.0
species: 178016
type: SpeciesReference

296047
stoichiometry: 1.0
species: 178743
type: SpeciesReference

158277
stoichiometry: 1.0
species: 179385
type: SpeciesReference

182742
reactant: 243822
product: 243834
product: 243858
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
fast: false
reactant: 243810
product: 243846
reversible: false
type: Reaction
name: 3 hydroxyacyl CoA dehydrogenase 3 oxooctadecanoyl CoA
kinetic law: 243870

185430
value: 0.0
type: LocalParameter

157339
stoichiometry: 1.0
species: 179347
type: SpeciesReference

179246
stoichiometry: 1.0
species: 178173
type: SpeciesReference

193409
value: 0.0
type: LocalParameter

258404
stoichiometry: 1.0
species: 178173
type: SpeciesReference

194493
value: 0.0
type: LocalParameter

262321
stoichiometry: 1.0
species: 179014
type: SpeciesReference

186222
value: 0.0
type: LocalParameter

197318
value: 1000.0
type: LocalParameter

182745
reactant: 243882
fast: false
type: Reaction
reactant: 243894
product: 243919
notes: GENE_ASSOCIATION: b4040 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
reversible: false
name: Hydroxybenzoate octaprenyltransferase
kinetic law: 243931
product: 243907

181005
product: 171260
type: Reaction
product: 171284
fast: false
kinetic law: 171308
product: 171272
reactant: 171236
product: 171296
notes: GENE_ASSOCIATION: ( b0381 or b0092 ) SUBSYSTEM: Cell Envelope Biosynthesis
reversible: true
reactant: 171248
name: D alanine D alanine ligase reversible

179247
notes: FORMULA: C29H46N7O17P3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Octanoyl-CoA-n-C80CoA
type: Species

185433
value: 1000.0
type: LocalParameter

187150
stoichiometry: 1.0
species: 178244
type: SpeciesReference

178669
notes: FORMULA: C5H9NO3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Glutamate-1-semialdehyde
type: Species

188301
value: -1000.0
type: LocalParameter

299770
stoichiometry: 1.0
species: 179167
type: SpeciesReference

190013
value: 0.0
type: LocalParameter

190704
value: 0.0
type: LocalParameter

194496
value: 0.0
type: LocalParameter

218661
stoichiometry: 1.0
species: 179291
type: SpeciesReference

237803
stoichiometry: 1.0
species: 178684
type: SpeciesReference

237112
stoichiometry: 1.0
species: 178673
type: SpeciesReference

185582
value: 1000.0
type: LocalParameter

224003
stoichiometry: 1.0
species: 178517
type: SpeciesReference

197317
value: 0.0
type: LocalParameter

239410
stoichiometry: 1.0
species: 178840
type: SpeciesReference

281773
stoichiometry: 1.0
species: 178743
type: SpeciesReference

278889
stoichiometry: 1.0
species: 178737
type: SpeciesReference

186223
value: 0.0
type: LocalParameter

182744
stoichiometry: 1.0
species: 178202
type: SpeciesReference

188302
value: 1000.0
type: LocalParameter

190703
value: 0.0
type: LocalParameter

174904
stoichiometry: 1.0
species: 178743
type: SpeciesReference

190012
value: 0.0
type: LocalParameter

193407
value: 0.0
type: LocalParameter

194495
value: 0.0
type: LocalParameter

295850
stoichiometry: 1.0
species: 179687
type: SpeciesReference

185581
value: 0.0
type: LocalParameter

194490
value: 0.0
type: LocalParameter

206165
stoichiometry: 1.0
species: 178236
type: SpeciesReference

250373
stoichiometry: 1.0
species: 177816
type: SpeciesReference

159972
stoichiometry: 1.0
species: 178389
type: SpeciesReference

181007
kinetic law: 171345
product: 171332
reactant: 171320
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: D alanyl D alanine DalaDala transport via diffusion extracellular to periplasm
type: Reaction

199519
value: 1000.0
type: LocalParameter

212277
stoichiometry: 1.0
species: 177902
type: SpeciesReference

260136
stoichiometry: 1.0
species: 178739
type: SpeciesReference

183230
type: Reaction
kinetic law: 254348
reversible: false
reactant: 254300
name: Lysophospholipase L1 2 acylglycerophosphoglycerol n C161 periplasm
product: 254336
product: 254324
product: 254312
fast: false
notes: GENE_ASSOCIATION: b0494 SUBSYSTEM: Glycerophospholipid Metabolism
reactant: 254288

196808
value: 0.0
type: LocalParameter

302037
stoichiometry: 1.0
species: 179379
type: SpeciesReference

158043
stoichiometry: 1.0
species: 177437
type: SpeciesReference

265544
stoichiometry: 1.0
species: 179151
type: SpeciesReference

194492
value: 1000.0
type: LocalParameter

269668
stoichiometry: 1.0
species: 178481
type: SpeciesReference

240752
stoichiometry: 1.0
species: 178499
type: SpeciesReference

202123
stoichiometry: 1.0
species: 179177
type: SpeciesReference

182511
kinetic law: 239024
product: 239012
reactant: 239000
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: glycolate transport via diffusion extracellular to periplasm
type: Reaction

196807
stoichiometry: 1.0
species: 178308
type: SpeciesReference

270500
stoichiometry: 1.0
species: 178739
type: SpeciesReference

299177
stoichiometry: 1.0
species: 179169
type: SpeciesReference

181009
kinetic law: 171381
product: 171369
reactant: 171357
notes: GENE_ASSOCIATION: b1325 SUBSYSTEM: Murein Recycling
fast: false
reversible: true
name: L alanyl gamma glutamate epimerase
type: Reaction

261501
stoichiometry: 1.0
species: 179006
type: SpeciesReference

196806
value: 1000.0
type: LocalParameter

251012
stoichiometry: 1.0
species: 178823
type: SpeciesReference

264591
stoichiometry: 1.0
species: 178838
type: SpeciesReference

265148
stoichiometry: 1.0
species: 178737
type: SpeciesReference

291922
stoichiometry: 1.0
species: 179545
type: SpeciesReference

189903
value: 0.0
type: LocalParameter

197311
value: 0.0
type: LocalParameter

199516
value: 0.0
type: LocalParameter

196762
value: 0.0
type: LocalParameter

186229
value: 0.0
type: LocalParameter

223456
stoichiometry: 1.0
species: 178743
type: SpeciesReference

185589
value: 0.0
type: LocalParameter

274289
stoichiometry: 0.5
species: 179229
type: SpeciesReference

202437
stoichiometry: 1.0
species: 179299
type: SpeciesReference

182513
stoichiometry: 1.0
species: 178193
type: SpeciesReference

183236
notes: GENE_ASSOCIATION: b0494 SUBSYSTEM: Glycerophospholipid Metabolism
type: Reaction
product: 254480
reactant: 254432
reactant: 254444
reversible: false
product: 254468
name: Lysophospholipase L1 2 acylglycerophosphoglycerol n C181 periplasm
kinetic law: 254492
product: 254456
fast: false

199515
value: 0.0
type: LocalParameter

189902
value: 0.0
type: LocalParameter

185587
value: 1000.0
type: LocalParameter

243570
stoichiometry: 1.0
species: 179169
type: SpeciesReference

197310
value: 0.0
type: LocalParameter

179016
notes: FORMULA: Mg
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: magnesium
type: Species

190709
value: 0.0
type: LocalParameter

301444
stoichiometry: 1.0
species: 178173
type: SpeciesReference

183233
reactant: 254360
product: 254384
type: Reaction
reactant: 254372
kinetic law: 254420
reversible: false
product: 254396
fast: false
product: 254408
name: Lysophospholipase L1 2 acylglycerophosphoglycerol n C180 periplasm
notes: GENE_ASSOCIATION: b0494 SUBSYSTEM: Glycerophospholipid Metabolism

196760
value: 1000.0
type: LocalParameter

189900
stoichiometry: 1.0
species: 178739
type: SpeciesReference

253275
stoichiometry: 1.0
species: 178739
type: SpeciesReference

251449
stoichiometry: 1.0
species: 177386
type: SpeciesReference

290367
stoichiometry: 1.0
species: 179573
type: SpeciesReference

244521
stoichiometry: 1.0
species: 178743
type: SpeciesReference

227827
stoichiometry: 1.0
species: 178546
type: SpeciesReference

287006
stoichiometry: 1.0
species: 179499
type: SpeciesReference

179018
notes: FORMULA: Mg
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: magnesium
type: Species

171357
stoichiometry: 1.0
species: 177912
type: SpeciesReference

182514
product: 239073
reactant: 239036
reactant: 239049
type: Reaction
name: Glycolate oxidase
reversible: false
fast: false
product: 239061
kinetic law: 239085
notes: GENE_ASSOCIATION: ( b2979 and b4467 and b4468 ) SUBSYSTEM: Alternate Carbon Metabolism

241382
stoichiometry: 1.0
species: 178016
type: SpeciesReference

183227
fast: false
reversible: false
product: 254264
notes: GENE_ASSOCIATION: b0494 SUBSYSTEM: Glycerophospholipid Metabolism
name: Lysophospholipase L1 2 acylglycerophosphoglycerol n C160 periplasm
product: 254252
reactant: 254216
reactant: 254228
kinetic law: 254276
type: Reaction
product: 254240

179024
notes: FORMULA: C6H6O24P6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: myo-Inositol-hexakisphosphate
type: Species

187377
value: 0.0
type: LocalParameter

178097
notes: FORMULA: C19H29N2O12
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: N-Acetyl-D-glucosamine-anhydrous-N-Acetylmuramic-acid
type: Species

178660
notes: FORMULA: C6H8O10P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Glucuronate-1-phosphate
type: Species

181698
kinetic law: 214090
reactant: 214078
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: L Alanine exchange
type: Reaction

257775
stoichiometry: 1.0
species: 178906
type: SpeciesReference

230412
stoichiometry: 1.0
species: 179797
type: SpeciesReference

195388
value: 0.0
type: LocalParameter

187603
value: 0.0
type: LocalParameter

236316
stoichiometry: 1.0
species: 179886
type: SpeciesReference

195870
value: 0.0
type: LocalParameter

178098
notes: FORMULA: C19H29N2O12
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: N-Acetyl-D-glucosamine-anhydrous-N-Acetylmuramic-acid
type: Species

182517
reversible: false
name: Glycolate oxidase
product: 239133
reactant: 239097
product: 239121
reactant: 239109
type: Reaction
kinetic law: 239145
fast: false
notes: GENE_ASSOCIATION: ( b2979 and b4467 and b4468 ) SUBSYSTEM: Alternate Carbon Metabolism

265761
stoichiometry: 1.0
species: 178085
type: SpeciesReference

187378
value: 1000.0
type: LocalParameter

196801
value: 0.0
type: LocalParameter

196755
value: 0.0
type: LocalParameter

195389
value: 1000.0
type: LocalParameter

187604
value: -1000.0
type: LocalParameter

181697
kinetic law: 214065
reactant: 214052
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: D Alanine exchange
type: Reaction

222279
stoichiometry: 1.0
species: 179251
type: SpeciesReference

159116
stoichiometry: 1.0
species: 177610
type: SpeciesReference

173524
stoichiometry: 1.0
species: 178100
type: SpeciesReference

178095
notes: FORMULA: C19H29N2O12
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: N-Acetyl-D-glucosamine-anhydrous-N-Acetylmuramic-acid
type: Species

187600
value: 1000.0
type: LocalParameter

179026
notes: FORMULA: C6H6O24P6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: myo-Inositol-hexakisphosphate
type: Species

228192
stoichiometry: 1.0
species: 178730
type: SpeciesReference

174106
stoichiometry: 1.0
species: 179169
type: SpeciesReference

196753
value: 1000.0
type: LocalParameter

247963
stoichiometry: 1.0
species: 178797
type: SpeciesReference

195872
value: 1000.0
type: LocalParameter

180082
stoichiometry: 1.0
species: 179737
type: SpeciesReference

186650
value: -1000.0
type: LocalParameter

278660
stoichiometry: 1.0
species: 179767
type: SpeciesReference

294897
stoichiometry: 1.0
species: 177941
type: SpeciesReference

162381
stoichiometry: 1.0
species: 179181
type: SpeciesReference

181699
kinetic law: 214114
reactant: 214102
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: D Alanyl D alanine exchange
type: Reaction

160118
stoichiometry: 1.0
species: 179467
type: SpeciesReference

258643
stoichiometry: 1.0
species: 178952
type: SpeciesReference

288385
stoichiometry: 1.0
species: 179904
type: SpeciesReference

187602
value: 0.0
type: LocalParameter

196752
value: 0.0
type: LocalParameter

291741
stoichiometry: 1.0
species: 179103
type: SpeciesReference

201617
stoichiometry: 1.0
species: 178743
type: SpeciesReference

168292
stoichiometry: 1.0
species: 179621
type: SpeciesReference

196804
value: 0.0
type: LocalParameter

179020
notes: FORMULA: C6H11O9P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 1D-myo-Inositol-1-phosphate
type: Species

187373
value: 0.0
type: LocalParameter

196331
value: 1000.0
type: LocalParameter

245078
stoichiometry: 1.0
species: 178562
type: SpeciesReference

235507
stoichiometry: 1.0
species: 178600
type: SpeciesReference

196805
value: -1000.0
type: LocalParameter

270865
stoichiometry: 1.0
species: 179463
type: SpeciesReference

209296
stoichiometry: 1.0
species: 178173
type: SpeciesReference

196759
value: 0.0
type: LocalParameter

178094
notes: FORMULA: C37H57N7O20
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: N-Acetyl-D-glucosamine-anhydrous-N-Acetylmuramyl-tetrapeptide
type: Species

229568
stoichiometry: 1.0
species: 177172
type: SpeciesReference

195874
value: 0.0
type: LocalParameter

234343
stoichiometry: 1.0
species: 178647
type: SpeciesReference

196758
value: 0.0
type: LocalParameter

179022
notes: FORMULA: C7H7O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: methylisocitrate
type: Species

195877
value: 0.0
type: LocalParameter

275259
stoichiometry: 1.0
species: 179463
type: SpeciesReference

178091
notes: FORMULA: C34H52N6O19
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: N-Acetyl-D-glucosamine-anhydrous-N-Acetylmuramyl-tripeptide
type: Species

288626
stoichiometry: 1.0
species: 179155
type: SpeciesReference

260582
stoichiometry: 1.0
species: 178914
type: SpeciesReference

187376
value: 0.0
type: LocalParameter

159756
stoichiometry: 1.0
species: 179805
type: SpeciesReference

195876
value: 0.0
type: LocalParameter

260088
stoichiometry: 1.0
species: 179143
type: SpeciesReference

294607
stoichiometry: 1.0
species: 178038
type: SpeciesReference

251666
stoichiometry: 1.0
species: 178846
type: SpeciesReference

178092
notes: FORMULA: C37H57N7O20
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: N-Acetyl-D-glucosamine-anhydrous-N-Acetylmuramyl-tetrapeptide
type: Species

254905
stoichiometry: 2.0
species: 178743
type: SpeciesReference

193405
value: 1000.0
type: LocalParameter

304346
stoichiometry: 1.0
species: 179994
type: SpeciesReference

282135
stoichiometry: 1.0
species: 179501
type: SpeciesReference

196335
value: 0.0
type: LocalParameter

219942
stoichiometry: 1.0
species: 180028
type: SpeciesReference

186658
stoichiometry: 1.0
species: 178743
type: SpeciesReference

196336
value: 0.0
type: LocalParameter

178668
notes: FORMULA: C5H9N2O2R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Glutaminyl-tRNA-Gln
type: Species

188300
value: 0.0
type: LocalParameter

195879
value: 1000.0
type: LocalParameter

266523
stoichiometry: 1.0
species: 179189
type: SpeciesReference

194066
value: 0.0
type: LocalParameter

190710
value: 0.0
type: LocalParameter

195381
value: 0.0
type: LocalParameter

186657
value: 0.0
type: LocalParameter

287720
stoichiometry: 1.0
species: 179463
type: SpeciesReference

178667
notes: FORMULA: C5H10N2O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: L-Glutamine
type: Species

179467
notes: FORMULA: HO4P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Phosphate
type: Species

187370
value: -1000.0
type: LocalParameter

179253
notes: FORMULA: C18H35O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: octadecanoate-n-C180
type: Species

267474
stoichiometry: 1.0
species: 178016
type: SpeciesReference

195382
value: 0.0
type: LocalParameter

194067
value: 0.0
type: LocalParameter

193403
value: 0.0
type: LocalParameter

229351
stoichiometry: 1.0
species: 178743
type: SpeciesReference

196333
value: 0.0
type: LocalParameter

193629
value: 0.0
type: LocalParameter

171855
stoichiometry: 1.0
species: 178055
type: SpeciesReference

187371
value: 1000.0
type: LocalParameter

178666
notes: FORMULA: C5H10N2O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: L-Glutamine
type: Species

182748
product: 243968
notes: GENE_ASSOCIATION: b0353 SUBSYSTEM: Transport Inner Membrane
kinetic law: 243992
fast: false
reversible: true
type: Reaction
reactant: 243943
product: 243980
reactant: 243955
name: 3 hydroxycinnamic acid transport via proton symport reversible periplasm

181691
kinetic law: 213920
reactant: 213908
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Adenosine exchange
type: Reaction

197309
value: 0.0
type: LocalParameter

195383
value: 0.0
type: LocalParameter

193402
value: 0.0
type: LocalParameter

194068
value: 0.0
type: LocalParameter

186659
value: 1000.0
type: LocalParameter

281328
stoichiometry: 1.0
species: 179435
type: SpeciesReference

178665
notes: FORMULA: C5H10N2O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Glutamine
type: Species

179469
notes: FORMULA: C28H41N7O19P3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Pimeloyl-CoA
type: Species

232009
stoichiometry: 1.0
species: 179463
type: SpeciesReference

179255
notes: FORMULA: C18H35O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: octadecanoate-n-C180
type: Species

157764
stoichiometry: 1.0
species: 179367
type: SpeciesReference

181690
kinetic law: 213896
reactant: 213884
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Adenine exchange
type: Reaction

193627
value: 0.0
type: LocalParameter

235713
stoichiometry: 1.0
species: 178662
type: SpeciesReference

195384
value: 1000.0
type: LocalParameter

158495
stoichiometry: 1.0
species: 178173
type: SpeciesReference

182960
name: L isoleucine transport via ABC system periplasm
product: 248432
notes: GENE_ASSOCIATION: ( b3454 and b3455 and b3457 and b3460 and b3456 ) SUBSYSTEM: Transport Inner Membrane
product: 248468
product: 248456
reactant: 248407
kinetic law: 248480
reversible: false
reactant: 248395
type: Reaction
fast: false
reactant: 248420
product: 248444

296265
stoichiometry: 1.0
species: 178038
type: SpeciesReference

181693
kinetic law: 213968
reactant: 213956
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: silver exchange
type: Reaction

178664
notes: FORMULA: C6H9O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Glucuronate
type: Species

305581
stoichiometry: 1.0
species: 178737
type: SpeciesReference

277292
stoichiometry: 1.0
species: 178743
type: SpeciesReference

185428
value: 1000.0
type: LocalParameter

218445
stoichiometry: 1.0
species: 179205
type: SpeciesReference

190019
value: 0.0
type: LocalParameter

224437
stoichiometry: 1.0
species: 178554
type: SpeciesReference

194062
value: 0.0
type: LocalParameter

193400
value: 0.0
type: LocalParameter

179463
notes: FORMULA: HO4P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Phosphate
type: Species

309262
stoichiometry: 1.0
species: 179595
type: SpeciesReference

262105
stoichiometry: 1.0
species: 178085
type: SpeciesReference

181692
kinetic law: 213944
reactant: 213932
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Adenosylcobalamin exchange
type: Reaction

178663
notes: FORMULA: C6H9O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Glucuronate
type: Species

266378
stoichiometry: 1.0
species: 179501
type: SpeciesReference

186652
value: 1000.0
type: LocalParameter

240532
stoichiometry: 1.0
species: 178244
type: SpeciesReference

186656
value: 0.0
type: LocalParameter

303282
stoichiometry: 1.0
species: 179954
type: SpeciesReference

185429
value: 0.0
type: LocalParameter

305725
stoichiometry: 1.0
species: 179976
type: SpeciesReference

193625
value: 1000.0
type: LocalParameter

194063
value: 0.0
type: LocalParameter

181696
kinetic law: 214040
reactant: 214028
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: beta Alanine exchange
type: Reaction

195386
value: 0.0
type: LocalParameter

259366
stoichiometry: 1.0
species: 178974
type: SpeciesReference

225089
stoichiometry: 1.0
species: 178518
type: SpeciesReference

196338
value: 1000.0
type: LocalParameter

178662
notes: FORMULA: C6H9O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Glucuronate
type: Species

194064
value: 1000.0
type: LocalParameter

193624
value: 0.0
type: LocalParameter

195387
value: 0.0
type: LocalParameter

181695
kinetic law: 214016
reactant: 214004
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 2 Oxoglutarate exchange
type: Reaction

181694
kinetic law: 213992
reactant: 213980
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Agmatine exchange
type: Reaction

178661
notes: FORMULA: C6H8O10P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Glucuronate-1-phosphate
type: Species

182963
fast: false
product: 248529
notes: GENE_ASSOCIATION: b0401 SUBSYSTEM: Transport Inner Membrane
product: 248517
kinetic law: 248541
reactant: 248505
type: Reaction
name: L isoleucine reversible transport via proton symport periplasm
reactant: 248493
reversible: true

179251
notes: FORMULA: C18H35O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: octadecanoate-n-C180
type: Species

179465
notes: FORMULA: HO4P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Phosphate
type: Species

186654
value: 0.0
type: LocalParameter

252028
stoichiometry: 1.0
species: 178743
type: SpeciesReference

179461
notes: FORMULA: C4H8NO7P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: O-Phospho-4-hydroxy-L-threonine
type: Species

183904
name: nucleoside triphosphatase ATP
fast: false
product: 270695
kinetic law: 270732
reversible: false
notes: GENE_ASSOCIATION: ( b0650 or b4161 ) SUBSYSTEM: Nucleotide Salvage Pathway
product: 270719
reactant: 270683
type: Reaction
product: 270707
reactant: 270671

187895
value: 0.0
type: LocalParameter

219121
stoichiometry: 1.0
species: 179635
type: SpeciesReference

181013
kinetic law: 171478
reversible: false
notes: GENE_ASSOCIATION: ( b2551 or b0870 ) SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
fast: false
product: 171465
type: Reaction
product: 171453
reactant: 171429
name: D alanine transaminase
reactant: 171441

196317
value: 1000.0
type: LocalParameter

179239
notes: FORMULA: O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Superoxide-anion
type: Species

275803
stoichiometry: 1.0
species: 179329
type: SpeciesReference

222063
stoichiometry: 1.0
species: 179938
type: SpeciesReference

185598
stoichiometry: 1.0
species: 178233
type: SpeciesReference

182954
type: Reaction
reversible: true
product: 248275
kinetic law: 248299
product: 248287
notes: GENE_ASSOCIATION: b3770 SUBSYSTEM: Valine Leucine and Isoleucine Metabolism
reactant: 248251
name: isoleucine transaminase
reactant: 248263
fast: false

224292
stoichiometry: 1.0
species: 178817
type: SpeciesReference

206587
stoichiometry: 1.0
species: 178398
type: SpeciesReference

181014
stoichiometry: 1.0
species: 179169
type: SpeciesReference

186215
value: 0.0
type: LocalParameter

187894
value: 0.0
type: LocalParameter

188319
value: 0.0
type: LocalParameter

190719
value: 1000.0
type: LocalParameter

258208
stoichiometry: 1.0
species: 179463
type: SpeciesReference

185449
value: 0.0
type: LocalParameter

185597
value: 1000.0
type: LocalParameter

193633
value: 0.0
type: LocalParameter

186216
value: 0.0
type: LocalParameter

224836
stoichiometry: 1.0
species: 178520
type: SpeciesReference

197300
value: -1000.0
type: LocalParameter

183906
product: 270768
reactant: 270756
name: nucleoside triphosphatase ITP
fast: false
reactant: 270744
type: Reaction
product: 270792
reversible: false
product: 270780
kinetic law: 270804
notes: GENE_ASSOCIATION: ( b4394 or b4161 ) SUBSYSTEM: Nucleotide Salvage Pathway

196319
value: 0.0
type: LocalParameter

179237
notes: FORMULA: O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Superoxide-anion
type: Species

284705
stoichiometry: 1.0
species: 178752
type: SpeciesReference

185448
value: 1000.0
type: LocalParameter

205312
stoichiometry: 1.0
species: 179501
type: SpeciesReference

190718
value: 0.0
type: LocalParameter

190003
value: 0.0
type: LocalParameter

197303
value: 0.0
type: LocalParameter

229580
stoichiometry: 1.0
species: 178737
type: SpeciesReference

308015
stoichiometry: 1.0
species: 179545
type: SpeciesReference

185596
value: 0.0
type: LocalParameter

233269
stoichiometry: 1.0
species: 178016
type: SpeciesReference

298803
stoichiometry: 1.0
species: 178467
type: SpeciesReference

186213
value: 0.0
type: LocalParameter

190717
value: 0.0
type: LocalParameter

190002
value: 0.0
type: LocalParameter

185595
value: 0.0
type: LocalParameter

193635
value: 0.0
type: LocalParameter

289313
stoichiometry: 1.0
species: 178278
type: SpeciesReference

197302
value: 1000.0
type: LocalParameter

165272
stoichiometry: 1.0
species: 178743
type: SpeciesReference

194271
stoichiometry: 2.0
species: 178992
type: SpeciesReference

181011
kinetic law: 171417
product: 171405
reactant: 171393
notes: GENE_ASSOCIATION: ( b4053 or b1190 ) SUBSYSTEM: Alanine and Aspartate Metabolism
fast: false
reversible: true
name: alanine racemase
type: Reaction

185445
value: 0.0
type: LocalParameter

179235
notes: FORMULA: O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Superoxide-anion
type: Species

178657
notes: FORMULA: C6H8O8
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Glucarate
type: Species

299782
stoichiometry: 1.0
species: 179819
type: SpeciesReference

181017
product: 171575
kinetic law: 171599
notes: GENE_ASSOCIATION: ( b0870 or b2551 ) SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
reactant: 171550
name: alanine transaminase
product: 171587
type: Reaction
reversible: false
fast: false
reactant: 171563

197306
value: 0.0
type: LocalParameter

182733
product: 243630
product: 243618
kinetic law: 243654
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
fast: false
type: Reaction
reactant: 243594
product: 243642
reactant: 243606
name: 3 hydroxyacyl CoA dehydrogenase 3 oxododecanoyl CoA
reversible: false

183908
reversible: false
name: nucleoside triphosphatase dITP
product: 270840
fast: false
type: Reaction
product: 270853
reactant: 270816
notes: GENE_ASSOCIATION: b4394 SUBSYSTEM: Nucleotide Salvage Pathway
product: 270865
reactant: 270828
kinetic law: 270877

237815
stoichiometry: 1.0
species: 178682
type: SpeciesReference

237100
stoichiometry: 1.0
species: 179545
type: SpeciesReference

161505
stoichiometry: 1.0
species: 177902
type: SpeciesReference

185594
value: 0.0
type: LocalParameter

195391
value: 0.0
type: LocalParameter

161799
stoichiometry: 1.0
species: 178743
type: SpeciesReference

190716
stoichiometry: 1.0
species: 178260
type: SpeciesReference

193418
value: 1000.0
type: LocalParameter

185446
value: 0.0
type: LocalParameter

185444
value: 0.0
type: LocalParameter

187890
value: 1000.0
type: LocalParameter

188314
value: 0.0
type: LocalParameter

178658
notes: FORMULA: C6H8O8
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Glucarate
type: Species

182732
stoichiometry: 1.0
species: 178200
type: SpeciesReference

244208
stoichiometry: 2.0
species: 178992
type: SpeciesReference

186211
value: 1000.0
type: LocalParameter

197305
value: 0.0
type: LocalParameter

213377
stoichiometry: 1.0
species: 177646
type: SpeciesReference

178659
notes: FORMULA: C6H8O8
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Glucarate
type: Species

282713
stoichiometry: 1.0
species: 178752
type: SpeciesReference

244969
stoichiometry: 1.0
species: 178743
type: SpeciesReference

182957
fast: false
reactant: 248311
type: Reaction
name: Isoleucyl tRNA synthetase
kinetic law: 248383
reversible: false
reactant: 248335
notes: GENE_ASSOCIATION: b0026 SUBSYSTEM: tRNA Charging
product: 248359
product: 248371
product: 248347
reactant: 248323

160551
stoichiometry: 1.0
species: 177815
type: SpeciesReference

188315
value: 0.0
type: LocalParameter

185443
value: 1000.0
type: LocalParameter

187893
value: 0.0
type: LocalParameter

181015
notes: GENE_ASSOCIATION: SUBSYSTEM: Alanine and Aspartate Metabolism
reversible: true
name: L alanine transaminase
reactant: 171502
reactant: 171490
product: 171526
product: 171514
fast: false
kinetic law: 171538
type: Reaction

179233
notes: FORMULA: O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: O2
type: Species

185592
value: 1000.0
type: LocalParameter

297646
stoichiometry: 1.0
species: 179757
type: SpeciesReference

281761
stoichiometry: 1.0
species: 178274
type: SpeciesReference

193630
value: 0.0
type: LocalParameter

217286
stoichiometry: 1.0
species: 178785
type: SpeciesReference

190714
value: 0.0
type: LocalParameter

179234
stoichiometry: 1.0
species: 178164
type: SpeciesReference

188316
value: 1000.0
type: LocalParameter

157327
stoichiometry: 1.0
species: 178085
type: SpeciesReference

296059
stoichiometry: 1.0
species: 179687
type: SpeciesReference

158265
stoichiometry: 1.0
species: 178085
type: SpeciesReference

197307
value: 1000.0
type: LocalParameter

182730
product: 243558
product: 243570
fast: false
reactant: 243522
reversible: false
product: 243546
type: Reaction
reactant: 243534
kinetic law: 243582
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
name: 3 hydroxyacyl CoA dehydrogenase 3 oxodecanoyl CoA

193631
value: 1000.0
type: LocalParameter

261029
stoichiometry: 1.0
species: 178982
type: SpeciesReference

172027
stoichiometry: 1.0
species: 178503
type: SpeciesReference

185591
value: 0.0
type: LocalParameter

258416
stoichiometry: 1.0
species: 178737
type: SpeciesReference

235943
stoichiometry: 1.0
species: 178653
type: SpeciesReference

190713
value: 1000.0
type: LocalParameter

176457
stoichiometry: 1.0
species: 178142
type: SpeciesReference

240765
stoichiometry: 1.0
species: 178692
type: SpeciesReference

299165
stoichiometry: 2.0
species: 178745
type: SpeciesReference

270512
stoichiometry: 1.0
species: 178376
type: SpeciesReference

308700
stoichiometry: 1.0
species: 180215
type: SpeciesReference

202135
stoichiometry: 1.0
species: 179589
type: SpeciesReference

182523
kinetic law: 239241
product: 239229
reactant: 239217
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: glycerol transport via diffusion extracellular to periplasm
type: Reaction

274773
stoichiometry: 1.0
species: 179545
type: SpeciesReference

185441
value: -1000.0
type: LocalParameter

196819
value: 0.0
type: LocalParameter

199509
value: 1000.0
type: LocalParameter

234574
stoichiometry: 1.0
species: 178173
type: SpeciesReference

251000
stoichiometry: 1.0
species: 178737
type: SpeciesReference

185440
value: 0.0
type: LocalParameter

196818
value: 0.0
type: LocalParameter

196770
stoichiometry: 1.0
species: 178283
type: SpeciesReference

199508
stoichiometry: 1.0
species: 178737
type: SpeciesReference

250385
stoichiometry: 1.0
species: 178283
type: SpeciesReference

159960
stoichiometry: 1.0
species: 179229
type: SpeciesReference

181019
product: 171649
reversible: false
kinetic law: 171685
name: Alanyl tRNA synthetase
product: 171673
notes: GENE_ASSOCIATION: b2697 SUBSYSTEM: tRNA Charging
reactant: 171611
reactant: 171637
type: Reaction
reactant: 171624
fast: false
product: 171661

232979
stoichiometry: 1.0
species: 179379
type: SpeciesReference

212289
stoichiometry: 1.0
species: 178830
type: SpeciesReference

183242
kinetic law: 254637
product: 254601
reactant: 254588
reversible: false
reactant: 254576
fast: false
type: Reaction
product: 254613
product: 254625
notes: GENE_ASSOCIATION: b3825 SUBSYSTEM: Glycerophospholipid Metabolism
name: Lysophospholipase L2 2 acylglycerophosphotidate n C140

260148
stoichiometry: 1.0
species: 179137
type: SpeciesReference

265532
stoichiometry: 1.0
species: 179149
type: SpeciesReference

182520
type: Reaction
notes: GENE_ASSOCIATION: ( b2979 and b4467 and b4468 ) SUBSYSTEM: Alternate Carbon Metabolism
reactant: 239169
name: Glycolate oxidase
product: 239193
product: 239181
fast: false
reactant: 239157
kinetic law: 239205
reversible: false

175797
stoichiometry: 1.0
species: 178125
type: SpeciesReference

196772
value: 0.0
type: LocalParameter

199506
value: 0.0
type: LocalParameter

189913
value: 0.0
type: LocalParameter

168978
stoichiometry: 1.0
species: 178355
type: SpeciesReference

182000
kinetic law: 219472
reactant: 219460
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Thiocyanate exchange
type: Reaction

253263
stoichiometry: 1.0
species: 177293
type: SpeciesReference

183900
kinetic law: 270598
name: 5 nucleotidase GMP
product: 270573
reversible: false
reactant: 270561
product: 270586
reactant: 270549
notes: GENE_ASSOCIATION: b2744 SUBSYSTEM: Nucleotide Salvage Pathway
fast: false
type: Reaction

286064
stoichiometry: 1.0
species: 179489
type: SpeciesReference

271490
stoichiometry: 1.0
species: 178357
type: SpeciesReference

196773
value: -1000.0
type: LocalParameter

189912
value: 0.0
type: LocalParameter

199505
value: 0.0
type: LocalParameter

187899
value: 0.0
type: LocalParameter

182001
kinetic law: 219496
reactant: 219484
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Thiamin exchange
type: Reaction

281340
stoichiometry: 1.0
species: 179407
type: SpeciesReference

183901
stoichiometry: 1.0
species: 178016
type: SpeciesReference

182526
kinetic law: 239278
product: 239265
reactant: 239253
notes: GENE_ASSOCIATION: ( s0001 or b3927 ) SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: true
name: glycerol transport via channel periplasm
type: Reaction

227839
stoichiometry: 1.0
species: 178737
type: SpeciesReference

160130
stoichiometry: 1.0
species: 180155
type: SpeciesReference

287018
stoichiometry: 1.0
species: 178278
type: SpeciesReference

187898
value: 0.0
type: LocalParameter

171369
stoichiometry: 1.0
species: 177914
type: SpeciesReference

296690
stoichiometry: 2.0
species: 179235
type: SpeciesReference

290983
stoichiometry: 1.0
species: 178787
type: SpeciesReference

223468
stoichiometry: 1.0
species: 178790
type: SpeciesReference

196774
value: 1000.0
type: LocalParameter

211041
stoichiometry: 1.0
species: 178760
type: SpeciesReference

218009
stoichiometry: 1.0
species: 178988
type: SpeciesReference

182525
stoichiometry: 1.0
species: 178745
type: SpeciesReference

183902
reactant: 270622
product: 270646
name: 5 nucleotidase GMP
notes: GENE_ASSOCIATION: ( b4055 or b0480 ) SUBSYSTEM: Nucleotide Salvage Pathway
kinetic law: 270659
reversible: false
type: Reaction
fast: false
product: 270634
reactant: 270610

186218
value: 1000.0
type: LocalParameter

185599
value: 0.0
type: LocalParameter

287708
stoichiometry: 2.0
species: 178743
type: SpeciesReference

162170
stoichiometry: 1.0
species: 178737
type: SpeciesReference

301456
stoichiometry: 1.0
species: 179815
type: SpeciesReference

196776
value: 0.0
type: LocalParameter

187369
value: 0.0
type: LocalParameter

179028
notes: FORMULA: C20H21N7O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 5-10-Methylenetetrahydrofolate
type: Species

199502
value: 0.0
type: LocalParameter

196766
value: 0.0
type: LocalParameter

178083
notes: FORMULA: C15H19N5O6S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: S-Adenosyl-4-methylthio-2-oxobutanoate
type: Species

261730
stoichiometry: 1.0
species: 179463
type: SpeciesReference

279337
stoichiometry: 1.0
species: 179463
type: SpeciesReference

186663
value: 0.0
type: LocalParameter

182304
reversible: false
reactant: 230713
kinetic law: 230786
product: 230737
product: 230773
product: 230749
reactant: 230725
notes: GENE_ASSOCIATION: ( b3452 and b3453 and b3450 and b3451 ) SUBSYSTEM: Transport Inner Membrane
fast: false
reactant: 230701
name: sn glycerol 3 phosphocholine transport via ABC system periplasm
type: Reaction
product: 230761

183237
stoichiometry: 1.0
species: 178173
type: SpeciesReference

247951
stoichiometry: 1.0
species: 178745
type: SpeciesReference

195860
value: 0.0
type: LocalParameter

180070
stoichiometry: 1.0
species: 178140
type: SpeciesReference

181688
kinetic law: 213848
reactant: 213836
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 4 Amino 4 deoxy L arabinose modified core oligosaccharide lipid A exchange
type: Reaction

196811
value: 0.0
type: LocalParameter

196765
value: 0.0
type: LocalParameter

295838
stoichiometry: 1.0
species: 179171
type: SpeciesReference

179894
notes: FORMULA: R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: tRNA-Ile
type: Species

278672
stoichiometry: 1.0
species: 178016
type: SpeciesReference

201605
stoichiometry: 1.0
species: 178737
type: SpeciesReference

291753
stoichiometry: 2.0
species: 179229
type: SpeciesReference

288397
stoichiometry: 1.0
species: 178085
type: SpeciesReference

181687
kinetic law: 213824
reactant: 213812
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: N Acetylneuraminate exchange
type: Reaction

178085
notes: FORMULA: C10H12N5O7P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: AMP
type: Species

196812
value: -1000.0
type: LocalParameter

241370
stoichiometry: 1.0
species: 178714
type: SpeciesReference

186661
value: 0.0
type: LocalParameter

274992
stoichiometry: 1.0
species: 179169
type: SpeciesReference

183239
product: 254540
product: 254528
reversible: false
type: Reaction
product: 254552
name: Lysophospholipase L2 2 acylglycerophosphotidate n C120
kinetic law: 254564
notes: GENE_ASSOCIATION: b3825 SUBSYSTEM: Glycerophospholipid Metabolism
reactant: 254516
reactant: 254504
fast: false

276620
stoichiometry: 1.0
species: 179467
type: SpeciesReference

259150
stoichiometry: 2.0
species: 179463
type: SpeciesReference

230400
stoichiometry: 1.0
species: 178690
type: SpeciesReference

181686
kinetic law: 213800
reactant: 213788
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: N Acetylmuramate exchange
type: Reaction

189906
value: 1000.0
type: LocalParameter

257787
stoichiometry: 1.0
species: 177924
type: SpeciesReference

236304
stoichiometry: 1.0
species: 178665
type: SpeciesReference

178086
notes: FORMULA: C10H12N5O7P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: AMP
type: Species

187366
value: 0.0
type: LocalParameter

196813
value: 1000.0
type: LocalParameter

182529
kinetic law: 239350
notes: GENE_ASSOCIATION: b3926 SUBSYSTEM: Alternate Carbon Metabolism
product: 239326
reactant: 239290
product: 239314
reactant: 239302
product: 239338
type: Reaction
fast: false
name: glycerol kinase
reversible: false

179892
notes: FORMULA: R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: tRNA-His
type: Species

196767
value: 1000.0
type: LocalParameter

214757
stoichiometry: 1.0
species: 178295
type: SpeciesReference

182303
notes: GENE_ASSOCIATION: b4041 SUBSYSTEM: Glycerophospholipid Metabolism
product: 230676
kinetic law: 230689
reversible: false
name: glycerol 3 phosphate acyltransferase C181
fast: false
reactant: 230640
type: Reaction
product: 230664
reactant: 230652

173512
stoichiometry: 1.0
species: 178047
type: SpeciesReference

181685
kinetic law: 213776
reactant: 213764
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: N Acetyl D mannosamine exchange
type: Reaction

195865
value: 1000.0
type: LocalParameter

220593
stoichiometry: 0.2905
species: 178799
type: SpeciesReference

187363
value: 0.0
type: LocalParameter

288638
stoichiometry: 1.0
species: 179531
type: SpeciesReference

275247
stoichiometry: 1.0
species: 179305
type: SpeciesReference

159744
stoichiometry: 1.0
species: 178737
type: SpeciesReference

284921
stoichiometry: 1.0
species: 179261
type: SpeciesReference

232759
stoichiometry: 1.0
species: 178601
type: SpeciesReference

182309
name: glycerol 3 phosphate dehydrogenase ubiquinone 8
kinetic law: 230957
product: 230945
reactant: 230906
fast: false
product: 230932
type: Reaction
notes: GENE_ASSOCIATION: ( ( b2241 and b2242 and b2243 ) or b3426 ) SUBSYSTEM: Oxidative Phosphorylation
reactant: 230919
reversible: false

196815
value: 0.0
type: LocalParameter

179890
notes: FORMULA: R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: tRNA-Gly
type: Species

187364
value: 1000.0
type: LocalParameter

196769
value: 0.0
type: LocalParameter

178080
notes: FORMULA: C15H23N6O5S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: S-Adenosyl-L-methionine
type: Species

251678
stoichiometry: 1.0
species: 179169
type: SpeciesReference

189909
value: 0.0
type: LocalParameter

296474
stoichiometry: 1.0
species: 178173
type: SpeciesReference

195863
value: 0.0
type: LocalParameter

182306
kinetic law: 230822
product: 230810
reactant: 230798
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: glycero 3 phosphocholine transport via diffusion extracellular to periplasm
type: Reaction

194057
value: 0.0
type: LocalParameter

223687
stoichiometry: 1.0
species: 178510
type: SpeciesReference

168280
stoichiometry: 1.0
species: 177999
type: SpeciesReference

195862
value: 0.0
type: LocalParameter

179459
notes: FORMULA: C9H7O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Phenylpyruvate
type: Species

182307
kinetic law: 230894
reversible: true
reactant: 230834
notes: GENE_ASSOCIATION: b3608 SUBSYSTEM: Alternate Carbon Metabolism
product: 230882
type: Reaction
reactant: 230846
product: 230858
name: glycerol 3 phosphate dehydrogenase NADP
fast: false
product: 230870

187362
value: 0.0
type: LocalParameter

194059
value: 1000.0
type: LocalParameter

178082
notes: FORMULA: C14H24N6O3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: S-Adenosylmethioninamine
type: Species

270853
stoichiometry: 1.0
species: 178743
type: SpeciesReference

181689
kinetic law: 213872
reactant: 213860
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: O Acetyl L serine exchange
type: Reaction

166650
stoichiometry: 1.0
species: 178757
type: SpeciesReference

234355
stoichiometry: 1.0
species: 178737
type: SpeciesReference

196321
value: 0.0
type: LocalParameter

190723
value: 0.0
type: LocalParameter

205531
stoichiometry: 1.0
species: 177370
type: SpeciesReference

260788
stoichiometry: 1.0
species: 179169
type: SpeciesReference

195394
value: 1000.0
type: LocalParameter

194055
value: 0.0
type: LocalParameter

280534
stoichiometry: 1.0
species: 178737
type: SpeciesReference

182736
product: 243714
type: Reaction
kinetic law: 243726
reversible: false
fast: false
product: 243690
reactant: 243666
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
name: 3 hydroxyacyl CoA dehydrogenase 3 oxotetradecanoyl CoA
product: 243702
reactant: 243678

301676
stoichiometry: 1.0
species: 178743
type: SpeciesReference

195869
value: 0.0
type: LocalParameter

188310
value: 1000.0
type: LocalParameter

215553
stoichiometry: 1.0
species: 178504
type: SpeciesReference

178654
notes: FORMULA: C6H11O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Gluconate
type: Species

179030
notes: FORMULA: C25H35N7O19P3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: R-Methylmalonyl-CoA
type: Species

185590
value: 0.0
type: LocalParameter

218229
stoichiometry: 1.0
species: 179099
type: SpeciesReference

190724
value: 0.0
type: LocalParameter

194056
value: 0.0
type: LocalParameter

193414
value: 0.0
type: LocalParameter

292551
stoichiometry: 1.0
species: 178470
type: SpeciesReference

179243
notes: FORMULA: C29H44N7O17P3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: trans-Oct-2-enoyl-CoA
type: Species

157776
stoichiometry: 1.0
species: 179501
type: SpeciesReference

179457
notes: FORMULA: C131H230N2O63P4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: phospho-heptosyl-phospho-heptosyl-heptosyl-kdo2-lipidA
type: Species

178653
notes: FORMULA: C6H12O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Glucose
type: Species

300936
stoichiometry: 1.0
species: 177502
type: SpeciesReference

195392
value: 0.0
type: LocalParameter

193417
value: -1000.0
type: LocalParameter

254917
stoichiometry: 1.0
species: 179251
type: SpeciesReference

194053
value: 1000.0
type: LocalParameter

266511
stoichiometry: 1.0
species: 178016
type: SpeciesReference

274424
stoichiometry: 2.0
species: 179463
type: SpeciesReference

195867
value: 0.0
type: LocalParameter

178656
notes: FORMULA: C6H11O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Gluconate
type: Species

196322
value: 0.0
type: LocalParameter

193416
value: 0.0
type: LocalParameter

190722
value: 0.0
type: LocalParameter

195393
value: 0.0
type: LocalParameter

304333
stoichiometry: 1.0
species: 179463
type: SpeciesReference

263092
stoichiometry: 1.0
species: 179131
type: SpeciesReference

179241
notes: FORMULA: C4H2O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Oxaloacetate
type: Species

174770
stoichiometry: 1.0
species: 178737
type: SpeciesReference

267486
stoichiometry: 1.0
species: 178743
type: SpeciesReference

178655
notes: FORMULA: C6H11O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Gluconate
type: Species

188311
value: 0.0
type: LocalParameter

179455
notes: FORMULA: C4H8NO6P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: O-Phospho-L-homoserine
type: Species

194051
value: 0.0
type: LocalParameter

193637
value: 1000.0
type: LocalParameter

249371
stoichiometry: 1.0
species: 178737
type: SpeciesReference

181684
kinetic law: 213752
reactant: 213740
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: N Acetyl D glucosamine exchange
type: Reaction

181021
reactant: 171698
reactant: 171710
kinetic law: 171782
product: 171734
reversible: false
product: 171770
product: 171758
notes: GENE_ASSOCIATION: ( b3454 and b3455 and b3457 and b3460 and b3456 ) SUBSYSTEM: Transport Inner Membrane
type: Reaction
product: 171746
fast: false
reactant: 171722
name: L alanine transport via ABC system periplasm

195398
value: 0.0
type: LocalParameter

303270
stoichiometry: 1.0
species: 179914
type: SpeciesReference

207011
stoichiometry: 3.0
species: 178737
type: SpeciesReference

305713
stoichiometry: 1.0
species: 179974
type: SpeciesReference

182300
type: Reaction
name: glycerol 3 phosphate acyltransferase C161
reactant: 230532
fast: false
product: 230544
reactant: 230520
kinetic law: 230568
product: 230556
notes: GENE_ASSOCIATION: b4041 SUBSYSTEM: Glycerophospholipid Metabolism
reversible: false

259378
stoichiometry: 1.0
species: 178976
type: SpeciesReference

225077
stoichiometry: 1.0
species: 178520
type: SpeciesReference

196326
value: 0.0
type: LocalParameter

178650
notes: FORMULA: C151H261N2O79P4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: glucosyl-inner-core-oligosaccharide-lipid-A
type: Species

181683
kinetic law: 213728
reactant: 213716
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: N Acetyl D glucosamine 1 phosphate exchange
type: Reaction

269680
stoichiometry: 1.0
species: 179467
type: SpeciesReference

193636
value: 0.0
type: LocalParameter

193410
value: 0.0
type: LocalParameter

194052
value: 0.0
type: LocalParameter

190009
value: 0.0
type: LocalParameter

195399
value: 1000.0
type: LocalParameter

291309
stoichiometry: 1.0
species: 179587
type: SpeciesReference

196324
value: 1000.0
type: LocalParameter

182301
name: glycerol 3 phosphate acyltransferase C180
product: 230604
reversible: false
reactant: 230592
reactant: 230580
notes: GENE_ASSOCIATION: b4041 SUBSYSTEM: Glycerophospholipid Metabolism
product: 230616
fast: false
type: Reaction
kinetic law: 230628

260364
stoichiometry: 1.0
species: 178739
type: SpeciesReference

196325
stoichiometry: 1.0
species: 178634
type: SpeciesReference

179898
notes: FORMULA: R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: tRNA-Lys
type: Species

181682
kinetic law: 213703
reactant: 213691
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: N Acetyl D galactosamine exchange
type: Reaction

182951
notes: GENE_ASSOCIATION: b1262 SUBSYSTEM: Tyrosine Tryptophan and Phenylalanine Metabolism
product: 248215
reversible: false
fast: false
product: 248203
type: Reaction
kinetic law: 248239
reactant: 248179
product: 248227
name: indole 3 glycerol phosphate synthase
reactant: 248191

179453
notes: FORMULA: C124H219N2O54P3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: phospho-heptosyl-heptosyl-kdo2-lipidA
type: Species

178088
notes: FORMULA: C10H12N5O7P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: AMP
type: Species

195396
value: 0.0
type: LocalParameter

193639
value: 0.0
type: LocalParameter

255474
stoichiometry: 1.0
species: 178588
type: SpeciesReference

185439
value: 0.0
type: LocalParameter

190006
value: 1000.0
type: LocalParameter

235725
stoichiometry: 1.0
species: 178743
type: SpeciesReference

196328
value: 0.0
type: LocalParameter

178652
notes: FORMULA: C6H12O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Glucose
type: Species

305593
stoichiometry: 1.0
species: 179968
type: SpeciesReference

258849
stoichiometry: 1.0
species: 178928
type: SpeciesReference

178089
notes: FORMULA: C34H52N6O19
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: N-Acetyl-D-glucosamine-anhydrous-N-Acetylmuramyl-tripeptide
type: Species

181681
kinetic law: 213679
reactant: 213667
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: N Acetyl D galactosamine 1 phosphate exchange
type: Reaction

158483
stoichiometry: 1.0
species: 177437
type: SpeciesReference

296277
stoichiometry: 1.0
species: 179745
type: SpeciesReference

195397
value: 0.0
type: LocalParameter

224449
stoichiometry: 1.0
species: 178737
type: SpeciesReference

193412
value: 1000.0
type: LocalParameter

166081
stoichiometry: 1.0
species: 177977
type: SpeciesReference

217068
stoichiometry: 1.0
species: 178741
type: SpeciesReference

178651
notes: FORMULA: C6H12O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Glucose
type: Species

182739
product: 243762
reactant: 243738
product: 243786
reactant: 243750
type: Reaction
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) SUBSYSTEM: Membrane Lipid Metabolism
kinetic law: 243798
name: 3 hydroxyacyl CoA dehydrogenase 3 oxohexadecanoyl CoA
product: 243774
fast: false
reversible: false

186664
value: 0.0
type: LocalParameter

202873
stoichiometry: 1.0
species: 179323
type: SpeciesReference

179896
notes: FORMULA: R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: tRNA-Leu
type: Species

240544
stoichiometry: 1.0
species: 178690
type: SpeciesReference

309250
stoichiometry: 2.0
species: 178745
type: SpeciesReference

179451
notes: FORMULA: C9H10NOR
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Phenylalanyl-tRNA-Phe
type: Species

181680
kinetic law: 213655
reactant: 213643
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Acetaldehyde exchange
type: Reaction

188328
value: 0.0
type: LocalParameter

178648
notes: FORMULA: C169H291N2O94P4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: glucosyl-glucosyl-galactosyl-glucosyl-inner-core-oligosaccharide-lipid-A
type: Species

179221
notes: FORMULA: C312H523N6O200P4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: O16-antigen-x4-core-oligosaccharide-lipid-A
type: Species

181027
kinetic law: 171941
product: 171929
reactant: 171916
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: L alanine transport via diffusion extracellular to periplasm
type: Reaction

186244
value: 0.0
type: LocalParameter

178647
notes: FORMULA: C9H16O4N2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: gamma-glutamyl-gamma-butyraldehyde
type: Species

188329
value: -1000.0
type: LocalParameter

172039
stoichiometry: 1.0
species: 179167
type: SpeciesReference

178649
notes: FORMULA: C9H20O3N3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: gamma-glutamyl-putrescine
type: Species

235955
stoichiometry: 1.0
species: 178745
type: SpeciesReference

262345
stoichiometry: 1.0
species: 179016
type: SpeciesReference

258619
stoichiometry: 1.0
species: 179463
type: SpeciesReference

241104
stoichiometry: 1.0
species: 178737
type: SpeciesReference

182766
kinetic law: 244292
product: 244280
reactant: 244268
notes: GENE_ASSOCIATION: b2344 SUBSYSTEM: Transport Outer Membrane
fast: false
reversible: false
name: Hexadecenoate transport via facilitated irreversible diffusion extracellular to periplasm
type: Reaction

297634
stoichiometry: 1.0
species: 178737
type: SpeciesReference

296023
stoichiometry: 1.0
species: 178745
type: SpeciesReference

157315
stoichiometry: 1.0
species: 178366
type: SpeciesReference

189719
value: 0.0
type: LocalParameter

218685
stoichiometry: 1.0
species: 179331
type: SpeciesReference

190728
value: 0.0
type: LocalParameter

237136
stoichiometry: 1.0
species: 179519
type: SpeciesReference

158252
stoichiometry: 1.0
species: 179932
type: SpeciesReference

181029
product: 171991
fast: false
kinetic law: 172015
product: 172003
reactant: 171966
reactant: 171954
notes: GENE_ASSOCIATION: b0356 SUBSYSTEM: Alternate Carbon Metabolism
reactant: 171979
reversible: true
type: Reaction
name: alcohol dehydrogenase glycerol

230616
stoichiometry: 1.0
species: 177902
type: SpeciesReference

186246
value: 1000.0
type: LocalParameter

182769
kinetic law: 244328
product: 244316
reactant: 244304
notes: GENE_ASSOCIATION: b3846 SUBSYSTEM: Membrane Lipid Metabolism
fast: false
reversible: false
name: hexadecenoyl coa cis trans isomerization
type: Reaction

187174
stoichiometry: 1.0
species: 179463
type: SpeciesReference

188325
value: 0.0
type: LocalParameter

179223
notes: FORMULA: C191H310N4O107P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: O16-antigen-x4-undecaprenyl-diphosphate
type: Species

178645
notes: FORMULA: C9H15O5N2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: gamma-glutamyl-gamma-aminobutyric-acid
type: Species

190036
value: 1000.0
type: LocalParameter

160587
stoichiometry: 1.0
species: 177759
type: SpeciesReference

190727
value: 1000.0
type: LocalParameter

174928
stoichiometry: 1.0
species: 177873
type: SpeciesReference

239434
stoichiometry: 1.0
species: 178737
type: SpeciesReference

182768
stoichiometry: 1.0
species: 177233
type: SpeciesReference

201641
stoichiometry: 1.0
species: 180149
type: SpeciesReference

188100
value: 0.0
type: LocalParameter

264797
stoichiometry: 1.0
species: 179807
type: SpeciesReference

178646
notes: FORMULA: C163H281N2O89P4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: glucosyl-galactosyl-glucosyl-inner-core-oligosaccharide-lipid-A
type: Species

229592
stoichiometry: 1.0
species: 178556
type: SpeciesReference

233233
stoichiometry: 1.0
species: 178173
type: SpeciesReference

190039
value: 0.0
type: LocalParameter

194082
value: 0.0
type: LocalParameter

185411
value: -1000.0
type: LocalParameter

179225
notes: FORMULA: C89H145N1O32P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: O16-antigen-undecaprenyl-diphosphate
type: Species

183918
type: Reaction
reactant: 271262
fast: false
product: 271286
notes: GENE_ASSOCIATION: b2954 SUBSYSTEM: Nucleotide Salvage Pathway
kinetic law: 271310
reversible: false
product: 271274
product: 271298
name: Nucleoside triphosphate pyrophosphorylase ditp
reactant: 271250

186248
value: 0.0
type: LocalParameter

182763
kinetic law: 244256
product: 244244
reactant: 244232
notes: GENE_ASSOCIATION: b2344 SUBSYSTEM: Transport Outer Membrane
fast: false
reversible: false
name: Hexadecanoate transport via facilitated irreversible diffusion extracellular to periplasm
type: Reaction

289301
stoichiometry: 1.0
species: 179559
type: SpeciesReference

181023
name: L alanine transport in via proton symport periplasm
reactant: 171795
reactant: 171807
product: 171831
reversible: false
notes: GENE_ASSOCIATION: b4208 SUBSYSTEM: Transport Inner Membrane
kinetic law: 171843
type: Reaction
product: 171819
fast: false

190038
stoichiometry: 2.0
species: 179383
type: SpeciesReference

189716
value: 1000.0
type: LocalParameter

161518
stoichiometry: 1.0
species: 178278
type: SpeciesReference

194081
value: 1000.0
type: LocalParameter

243558
stoichiometry: 1.0
species: 178743
type: SpeciesReference

188106
value: 0.0
type: LocalParameter

169196
stoichiometry: 1.0
species: 177926
type: SpeciesReference

245726
stoichiometry: 1.0
species: 178745
type: SpeciesReference

197339
value: 0.0
type: LocalParameter

245090
stoichiometry: 1.0
species: 178016
type: SpeciesReference

235532
stoichiometry: 1.0
species: 178646
type: SpeciesReference

167317
stoichiometry: 1.0
species: 177995
type: SpeciesReference

194084
value: 0.0
type: LocalParameter

282376
stoichiometry: 1.0
species: 179465
type: SpeciesReference

185414
value: 0.0
type: LocalParameter

188103
value: 1000.0
type: LocalParameter

179227
notes: FORMULA: C89H145N1O32P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: O16-antigen-undecaprenyl-diphosphate
type: Species

287297
stoichiometry: 1.0
species: 178743
type: SpeciesReference

197338
value: 0.0
type: LocalParameter

181025
name: L alanine transport in via sodium symport periplasm
reversible: false
reactant: 171867
product: 171891
notes: GENE_ASSOCIATION: b0007 SUBSYSTEM: Transport Inner Membrane
reactant: 171855
product: 171879
kinetic law: 171904
type: Reaction
fast: false

180297
kinetic law: 156495
product: 156483
reactant: 156471
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: 2 3 diaminopropionate transport via diffusion
type: Reaction

197336
value: 0.0
type: LocalParameter

211016
stoichiometry: 1.0
species: 179169
type: SpeciesReference

244933
stoichiometry: 1.0
species: 178651
type: SpeciesReference

185413
value: 1000.0
type: LocalParameter

189713
value: 0.0
type: LocalParameter

188104
value: 0.0
type: LocalParameter

265954
stoichiometry: 1.0
species: 178737
type: SpeciesReference

197337
stoichiometry: 1.0
species: 178173
type: SpeciesReference

183917
product: 271214
reactant: 271177
fast: false
reversible: false
product: 271202
name: Nucleoside triphosphate pyrophosphorylase dgtp
product: 271226
notes: GENE_ASSOCIATION: ( b2781 or b0099 ) SUBSYSTEM: Nucleotide Salvage Pathway
reactant: 271189
type: Reaction
kinetic law: 271238

224280
stoichiometry: 1.0
species: 178555
type: SpeciesReference

248493
stoichiometry: 1.0
species: 178745
type: SpeciesReference

196787
value: 0.0
type: LocalParameter

202413
stoichiometry: 1.0
species: 178016
type: SpeciesReference

183914
product: 271057
type: Reaction
name: nucleoside triphosphatase GTP periplasm
notes: GENE_ASSOCIATION: b0980 SUBSYSTEM: Nucleotide Salvage Pathway
product: 271069
reversible: false
reactant: 271045
kinetic law: 271093
reactant: 271033
product: 271081
fast: false

195104
value: -1000.0
type: LocalParameter

179229
notes: FORMULA: O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: O2
type: Species

199785
value: 0.0
type: LocalParameter

182537
stoichiometry: 1.0
species: 178190
type: SpeciesReference

189712
value: 0.0
type: LocalParameter

225668
stoichiometry: 1.0
species: 179613
type: SpeciesReference

182010
kinetic law: 219640
reactant: 219628
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Trimethylamine N oxide exchange
type: Reaction

197335
value: 1000.0
type: LocalParameter

195103
value: 0.0
type: LocalParameter

181895
kinetic law: 217780
reactant: 217768
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: L Malate exchange
type: Reaction

293097
stoichiometry: 1.0
species: 178737
type: SpeciesReference

223432
stoichiometry: 1.0
species: 178786
type: SpeciesReference

226604
stoichiometry: 1.0
species: 178745
type: SpeciesReference

209491
stoichiometry: 1.0
species: 179167
type: SpeciesReference

156368
stoichiometry: 1.0
species: 177346
type: SpeciesReference

183915
product: 271153
reactant: 271105
fast: false
kinetic law: 271165
notes: GENE_ASSOCIATION: b4161 SUBSYSTEM: Nucleotide Salvage Pathway
name: nucleoside triphosphatase CTP
product: 271129
reactant: 271117
product: 271141
type: Reaction
reversible: false

301468
stoichiometry: 1.0
species: 178016
type: SpeciesReference

181896
kinetic law: 217804
reactant: 217792
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Maltose exchange
type: Reaction

189926
value: 1000.0
type: LocalParameter

195102
value: 0.0
type: LocalParameter

274009
stoichiometry: 0.5
species: 179229
type: SpeciesReference

253299
stoichiometry: 1.0
species: 178745
type: SpeciesReference

286052
stoichiometry: 1.0
species: 179487
type: SpeciesReference

252052
stoichiometry: 1.0
species: 179589
type: SpeciesReference

183912
name: nucleoside triphosphatase GTP
type: Reaction
notes: GENE_ASSOCIATION: b4161 SUBSYSTEM: Nucleotide Salvage Pathway
reactant: 270973
fast: false
reactant: 270961
product: 270985
product: 270997
kinetic law: 271021
reversible: false
product: 271009

162183
stoichiometry: 1.0
species: 177908
type: SpeciesReference

182012
kinetic law: 219664
reactant: 219652
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Trehalose exchange
type: Reaction

196784
value: -1000.0
type: LocalParameter

212252
stoichiometry: 1.0
species: 178758
type: SpeciesReference

182760
product: 244208
type: Reaction
kinetic law: 244220
fast: false
reversible: false
notes: GENE_ASSOCIATION: b0261 SUBSYSTEM: Methionine Metabolism
reactant: 244184
reactant: 244172
product: 244196
name: Homocysteine Methyltransferase

187618
value: 0.0
type: LocalParameter

197333
value: 0.0
type: LocalParameter

195105
value: 1000.0
type: LocalParameter

304372
stoichiometry: 1.0
species: 178743
type: SpeciesReference

278382
stoichiometry: 1.0
species: 177864
type: SpeciesReference

199786
value: 0.0
type: LocalParameter

182538
name: Glycyl tRNA synthetase
product: 239542
reactant: 239494
fast: false
product: 239554
reactant: 239506
notes: GENE_ASSOCIATION: ( b3559 and b3560 ) SUBSYSTEM: tRNA Charging
kinetic law: 239566
product: 239530
reactant: 239518
reversible: false
type: Reaction

183913
stoichiometry: 1.0
species: 178215
type: SpeciesReference

182013
kinetic law: 219688
reactant: 219676
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: L Tryptophan exchange
type: Reaction

281352
stoichiometry: 1.0
species: 179467
type: SpeciesReference

196785
value: 1000.0
type: LocalParameter

171332
stoichiometry: 1.0
species: 178059
type: SpeciesReference

181898
kinetic law: 217829
reactant: 217816
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Maltohexaose exchange
type: Reaction

197332
value: 0.0
type: LocalParameter

291947
stoichiometry: 1.0
species: 178173
type: SpeciesReference

201798
stoichiometry: 1.0
species: 178337
type: SpeciesReference

189924
stoichiometry: 1.0
species: 178745
type: SpeciesReference

187617
value: 1000.0
type: LocalParameter

232967
stoichiometry: 1.0
species: 178620
type: SpeciesReference

183910
reversible: false
type: Reaction
reactant: 270901
product: 270925
fast: false
product: 270913
product: 270937
kinetic law: 270949
reactant: 270889
notes: GENE_ASSOCIATION: b4394 SUBSYSTEM: Nucleotide Salvage Pathway
name: nucleoside triphosphatase XTP

159996
stoichiometry: 1.0
species: 179167
type: SpeciesReference

199789
value: 1000.0
type: LocalParameter

277267
stoichiometry: 1.0
species: 179167
type: SpeciesReference

189922
value: 0.0
type: LocalParameter

181890
kinetic law: 217708
reactant: 217696
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: L Lysine exchange
type: Reaction

206189
stoichiometry: 1.0
species: 178389
type: SpeciesReference

250397
stoichiometry: 1.0
species: 177941
type: SpeciesReference

189923
value: 0.0
type: LocalParameter

196782
stoichiometry: 1.0
species: 178743
type: SpeciesReference

197331
value: 0.0
type: LocalParameter

267908
stoichiometry: 1.0
species: 179191
type: SpeciesReference

222704
stoichiometry: 1.0
species: 178743
type: SpeciesReference

182532
type: Reaction
reactant: 239362
product: 239398
kinetic law: 239422
name: hydroxyacylglutathione hydrolase
product: 239386
reactant: 239374
product: 239410
notes: GENE_ASSOCIATION: b0212 SUBSYSTEM: Methylglyoxal Metabolism
fast: false
reversible: false

196783
value: 0.0
type: LocalParameter

240778
stoichiometry: 1.0
species: 178745
type: SpeciesReference

233678
stoichiometry: 1.0
species: 179169
type: SpeciesReference

182535
type: Reaction
kinetic law: 239482
reactant: 239434
reactant: 239446
product: 239458
name: glyoxalase III
product: 239470
reversible: false
notes: GENE_ASSOCIATION: SUBSYSTEM: Methylglyoxal Metabolism
fast: false

190032
value: 0.0
type: LocalParameter

181892
kinetic law: 217732
reactant: 217720
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: L Lyxose exchange
type: Reaction

270524
stoichiometry: 1.0
species: 179467
type: SpeciesReference

308712
stoichiometry: 1.0
species: 180218
type: SpeciesReference

159780
stoichiometry: 1.0
species: 177762
type: SpeciesReference

196780
value: 1000.0
type: LocalParameter

181893
kinetic law: 217756
reactant: 217744
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: D Malate exchange
type: Reaction

190033
value: 0.0
type: LocalParameter

269644
stoichiometry: 1.0
species: 178478
type: SpeciesReference

265124
stoichiometry: 1.0
species: 177999
type: SpeciesReference

252413
stoichiometry: 1.0
species: 178862
type: SpeciesReference

251036
stoichiometry: 1.0
species: 178743
type: SpeciesReference

249347
stoichiometry: 1.0
species: 178743
type: SpeciesReference

265749
stoichiometry: 1.0
species: 179167
type: SpeciesReference

196781
value: 0.0
type: LocalParameter

195100
value: 1000.0
type: LocalParameter

291334
stoichiometry: 1.0
species: 178743
type: SpeciesReference

234586
stoichiometry: 1.0
species: 178673
type: SpeciesReference

261525
stoichiometry: 1.0
species: 178734
type: SpeciesReference

191411
value: 1000.0
type: LocalParameter

181678
kinetic law: 213607
reactant: 213595
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Acetate exchange
type: Reaction

187622
value: 1000.0
type: LocalParameter

182318
kinetic law: 231354
product: 231342
reactant: 231330
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: glycerophoglycerol transport via diffusion extracellular to periplasm
type: Reaction

166686
stoichiometry: 1.0
species: 179723
type: SpeciesReference

223650
stoichiometry: 1.0
species: 178511
type: SpeciesReference

234367
stoichiometry: 1.0
species: 179171
type: SpeciesReference

196354
value: 0.0
type: LocalParameter

187624
value: 0.0
type: LocalParameter

178070
notes: FORMULA: C4H6N4O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Allantoin
type: Species

181677
kinetic law: 213583
reactant: 213570
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: L alanine D glutamate meso 2 6 diaminoheptanedioate exchange
type: Reaction

270889
stoichiometry: 1.0
species: 178737
type: SpeciesReference

187398
value: 1000.0
type: LocalParameter

209272
stoichiometry: 1.0
species: 178483
type: SpeciesReference

182319
name: sn glycerol 3 phosphoethanolamine transport via ABC system periplasm
reactant: 231379
product: 231415
fast: false
reversible: false
type: Reaction
reactant: 231391
product: 231427
notes: GENE_ASSOCIATION: ( b3452 and b3453 and b3450 and b3451 ) SUBSYSTEM: Transport Inner Membrane
kinetic law: 231451
reactant: 231366
product: 231403
product: 231439

244509
stoichiometry: 1.0
species: 178016
type: SpeciesReference

179447
notes: FORMULA: C34H30FeN4O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Protoheme
type: Species

182007
kinetic law: 219592
reactant: 219580
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Thymidine exchange
type: Reaction

195898
value: 0.0
type: LocalParameter

196829
value: 0.0
type: LocalParameter

193609
value: 0.0
type: LocalParameter

275235
stoichiometry: 1.0
species: 178743
type: SpeciesReference

284741
stoichiometry: 1.0
species: 179365
type: SpeciesReference

242191
stoichiometry: 1.0
species: 178737
type: SpeciesReference

220581
stoichiometry: 0.09474
species: 178765
type: SpeciesReference

187620
value: 0.0
type: LocalParameter

196826
value: 0.0
type: LocalParameter

296486
stoichiometry: 1.0
species: 178737
type: SpeciesReference

191412
value: 0.0
type: LocalParameter

196352
value: 1000.0
type: LocalParameter

181679
kinetic law: 213631
reactant: 213619
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Acetoacetate exchange
type: Reaction

187621
value: -1000.0
type: LocalParameter

196827
value: 1000.0
type: LocalParameter

284957
stoichiometry: 1.0
species: 179383
type: SpeciesReference

232747
stoichiometry: 1.0
species: 178016
type: SpeciesReference

160708
stoichiometry: 1.0
species: 178743
type: SpeciesReference

179449
notes: FORMULA: C34H30FeN4O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Protoheme
type: Species

182009
kinetic law: 219616
reactant: 219604
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Trimethylamine exchange
type: Reaction

181674
kinetic law: 213510
reactant: 213498
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 4 Hydroxyphenylacetaldehyde exchange
type: Reaction

167740
stoichiometry: 1.0
species: 178737
type: SpeciesReference

259162
stoichiometry: 1.0
species: 178958
type: SpeciesReference

191415
value: 0.0
type: LocalParameter

179000
notes: FORMULA: C5H11NO3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-methionine-R-sulfoxide
type: Species

182004
kinetic law: 219544
reactant: 219532
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: L Threonine O 3 phosphate exchange
type: Reaction

277486
stoichiometry: 1.0
species: 179345
type: SpeciesReference

178073
notes: FORMULA: C4H6N4O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Allantoin
type: Species

181899
kinetic law: 217853
reactant: 217841
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Maltopentaose exchange
type: Reaction

181673
kinetic law: 213486
reactant: 213474
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 4 Aminobutanoate exchange
type: Reaction

189919
value: 0.0
type: LocalParameter

187628
value: 1000.0
type: LocalParameter

162902
stoichiometry: 1.0
species: 177881
type: SpeciesReference

173548
stoichiometry: 1.0
species: 178924
type: SpeciesReference

196350
value: -1000.0
type: LocalParameter

182002
stoichiometry: 1.0
species: 178992
type: SpeciesReference

191414
value: 0.0
type: LocalParameter

195893
value: 1000.0
type: LocalParameter

217092
stoichiometry: 1.0
species: 178744
type: SpeciesReference

182315
kinetic law: 231221
product: 231209
reactant: 231197
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: glycero 3 phosphoethanolamine transport via diffusion extracellular to periplasm
type: Reaction

182003
kinetic law: 219520
reactant: 219508
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: L Threonine exchange
type: Reaction

179880
notes: FORMULA: C10H17O10PR2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: tRNA-Asn
type: Species

270744
stoichiometry: 1.0
species: 178737
type: SpeciesReference

196825
value: 0.0
type: LocalParameter

273074
stoichiometry: 1.0
species: 179229
type: SpeciesReference

251255
stoichiometry: 1.0
species: 179976
type: SpeciesReference

181672
kinetic law: 213462
reactant: 213450
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 3 UMP exchange
type: Reaction

283316
stoichiometry: 1.0
species: 178745
type: SpeciesReference

178074
notes: FORMULA: C4H7N4O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Allantoate
type: Species

181676
kinetic law: 213558
reactant: 213546
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: L alanine D glutamate meso 2 6 diaminoheptanedioate D alanine exchange
type: Reaction

189916
value: 1000.0
type: LocalParameter

187625
value: 0.0
type: LocalParameter

247987
stoichiometry: 1.0
species: 178795
type: SpeciesReference

199782
value: 0.0
type: LocalParameter

179002
notes: FORMULA: C5H11NO3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: L-methionine-R-sulfoxide
type: Species

182006
kinetic law: 219568
reactant: 219556
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Thymine exchange
type: Reaction

195897
value: 0.0
type: LocalParameter

183249
stoichiometry: 1.0
species: 178206
type: SpeciesReference

182316
type: Reaction
kinetic law: 231318
reactant: 231257
reactant: 231233
product: 231294
name: sn glycerol 3 phosphoglycerol transport via ABC system periplasm
product: 231306
product: 231282
product: 231270
reactant: 231245
notes: GENE_ASSOCIATION: ( b3452 and b3453 and b3450 and b3451 ) SUBSYSTEM: Transport Inner Membrane
reversible: false
fast: false

178071
notes: FORMULA: C4H6N4O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Allantoin
type: Species

196778
value: 0.0
type: LocalParameter

196822
value: 0.0
type: LocalParameter

288361
stoichiometry: 1.0
species: 178173
type: SpeciesReference

187626
value: 0.0
type: LocalParameter

191416
value: 1000.0
type: LocalParameter

181675
kinetic law: 213534
reactant: 213522
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 5 Dehydro D gluconate exchange
type: Reaction

291765
stoichiometry: 2.0
species: 178743
type: SpeciesReference

195895
value: 0.0
type: LocalParameter

279324
stoichiometry: 1.0
species: 179403
type: SpeciesReference

196777
value: 0.0
type: LocalParameter

252632
stoichiometry: 1.0
species: 178744
type: SpeciesReference

179882
notes: FORMULA: R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: tRNA-Asp
type: Species

178077
notes: FORMULA: X
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: applipoprotein
type: Species

182984
kinetic law: 248901
product: 248889
reactant: 248877
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: Indole transport via diffusion extracellular to periplasm
type: Reaction

296241
stoichiometry: 1.0
species: 179713
type: SpeciesReference

196820
value: 1000.0
type: LocalParameter

178640
notes: FORMULA: C16H23N5O15P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: GDP-L-fucose
type: Species

188320
value: 0.0
type: LocalParameter

302061
stoichiometry: 1.0
species: 179589
type: SpeciesReference

255462
stoichiometry: 1.0
species: 178109
type: SpeciesReference

240556
stoichiometry: 1.0
species: 178743
type: SpeciesReference

185403
value: 0.0
type: LocalParameter

191419
value: 0.0
type: LocalParameter

181031
name: alcohol dehydrogenase ethanol
type: Reaction
reactant: 172027
kinetic law: 172087
product: 172051
reactant: 172039
fast: false
product: 172075
reversible: true
product: 172063
notes: GENE_ASSOCIATION: ( b0356 or b1478 or b1241 ) SUBSYSTEM: Pyruvate Metabolism

193603
value: 0.0
type: LocalParameter

194085
value: 0.0
type: LocalParameter

202861
stoichiometry: 1.0
species: 178743
type: SpeciesReference

262129
stoichiometry: 1.0
species: 179501
type: SpeciesReference

187390
value: 0.0
type: LocalParameter

266354
stoichiometry: 1.0
species: 178743
type: SpeciesReference

263298
stoichiometry: 1.0
species: 178737
type: SpeciesReference

179884
notes: FORMULA: R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: tRNA-Cys
type: Species

182310
type: Reaction
reversible: false
reactant: 230970
reactant: 230983
product: 230995
notes: GENE_ASSOCIATION: ( b2241 and b2242 and b2243 ) SUBSYSTEM: Oxidative Phosphorylation
fast: false
kinetic law: 231020
product: 231007
name: glycerol 3 phosphate dehydrogenase menaquinone 8

218469
stoichiometry: 1.0
species: 179211
type: SpeciesReference

185404
value: 0.0
type: LocalParameter

223880
stoichiometry: 1.0
species: 178512
type: SpeciesReference

191418
value: 0.0
type: LocalParameter

297416
stoichiometry: 1.0
species: 179735
type: SpeciesReference

194086
value: 1000.0
type: LocalParameter

224413
stoichiometry: 1.0
species: 179229
type: SpeciesReference

181671
kinetic law: 213438
reactant: 213426
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 3 3 hydroxy phenyl propionate exchange
type: Reaction

182312
reactant: 231033
reactant: 231047
product: 231073
type: Reaction
name: glycerol 3 phosphate dehydrogenase demethylmenaquinone 8
kinetic law: 231086
notes: GENE_ASSOCIATION: ( b2241 and b2242 and b2243 ) SUBSYSTEM: Oxidative Phosphorylation
fast: false
product: 231060
reversible: false

207023
stoichiometry: 2.0
species: 179167
type: SpeciesReference

264579
stoichiometry: 1.0
species: 178743
type: SpeciesReference

187391
value: 0.0
type: LocalParameter

185405
value: 0.0
type: LocalParameter

305749
stoichiometry: 1.0
species: 177908
type: SpeciesReference

190731
value: 0.0
type: LocalParameter

193601
value: 1000.0
type: LocalParameter

181033
product: 172160
reactant: 172099
kinetic law: 172172
reactant: 172111
fast: false
reactant: 172123
product: 172135
reversible: false
notes: GENE_ASSOCIATION: b1385 SUBSYSTEM: Alternate Carbon Metabolism
product: 172147
name: aldehyde dehydrogenase phenylacetaldehyde NAD
type: Reaction

181670
kinetic law: 213414
reactant: 213402
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 3 hydroxycinnamic acid exchange
type: Reaction

179441
notes: FORMULA: C9H11NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: L-Phenylalanine
type: Species

182987
fast: false
reactant: 248914
reactant: 248926
name: Namyo inositol symporter periplasm
notes: GENE_ASSOCIATION: b3679 SUBSYSTEM: Transport Inner Membrane
kinetic law: 248962
product: 248950
product: 248938
type: Reaction
reversible: false

278648
stoichiometry: 1.0
species: 178173
type: SpeciesReference

178076
notes: FORMULA: C6H11O9P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Allulose-6-phosphate
type: Species

182313
type: Reaction
fast: false
product: 231173
name: sn glycerol 3 phosphoethanolamine transport via ABC system periplasm
product: 231149
reactant: 231099
reactant: 231113
notes: GENE_ASSOCIATION: ( b3452 and b3453 and b3450 and b3451 ) SUBSYSTEM: Transport Inner Membrane
reactant: 231125
kinetic law: 231185
reversible: false
product: 231161
product: 231137

179886
notes: FORMULA: R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: tRNA-Gln
type: Species

260376
stoichiometry: 1.0
species: 179119
type: SpeciesReference

187392
value: 1000.0
type: LocalParameter

188107
value: 0.0
type: LocalParameter

188108
value: 1000.0
type: LocalParameter

185406
value: 1000.0
type: LocalParameter

190732
value: 0.0
type: LocalParameter

258837
stoichiometry: 1.0
species: 178926
type: SpeciesReference

251883
stoichiometry: 1.0
species: 178860
type: SpeciesReference

194088
value: 0.0
type: LocalParameter

193600
value: -1000.0
type: LocalParameter

188324
value: 1000.0
type: LocalParameter

187393
stoichiometry: 1.0
species: 177830
type: SpeciesReference

178644
notes: FORMULA: C83H135N1O27P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: galactofuranosyl-glucosyl-O-acetyl-rhamanosyl-N-acetylglucosamyl-undecaprenyl-diphosphate
type: Species

186241
value: 0.0
type: LocalParameter

174783
stoichiometry: 2.0
species: 178016
type: SpeciesReference

194089
value: 0.0
type: LocalParameter

190733
value: 1000.0
type: LocalParameter

235313
stoichiometry: 1.0
species: 178743
type: SpeciesReference

193607
value: 1000.0
type: LocalParameter

185407
value: 0.0
type: LocalParameter

219966
stoichiometry: 1.0
species: 180036
type: SpeciesReference

251461
stoichiometry: 1.0
species: 177912
type: SpeciesReference

196359
value: 1000.0
type: LocalParameter

267498
stoichiometry: 1.0
species: 179187
type: SpeciesReference

179888
notes: FORMULA: R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: tRNA-Glu
type: Species

178643
notes: FORMULA: C10H11N5O20P5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Guanosine-3-diphosphate-5-triphosphate
type: Species

271917
stoichiometry: 1.0
species: 178820
type: SpeciesReference

187394
value: 0.0
type: LocalParameter

179443
notes: FORMULA: C9H11NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: L-Phenylalanine
type: Species

263080
stoichiometry: 1.0
species: 179139
type: SpeciesReference

261053
stoichiometry: 1.0
species: 178978
type: SpeciesReference

250807
stoichiometry: 1.0
species: 178832
type: SpeciesReference

193606
value: 0.0
type: LocalParameter

178079
notes: FORMULA: C6H11O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Altronate
type: Species

301688
stoichiometry: 1.0
species: 179173
type: SpeciesReference

187395
value: 0.0
type: LocalParameter

178642
notes: FORMULA: C16H21N5O15P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: GDP-4-oxo-L-fucose
type: Species

171831
stoichiometry: 1.0
species: 178743
type: SpeciesReference

227851
stoichiometry: 1.0
species: 178016
type: SpeciesReference

229375
stoichiometry: 1.0
species: 178570
type: SpeciesReference

186243
value: 0.0
type: LocalParameter

182981
name: Indole transport via proton symport reversible periplasm
reversible: true
product: 248841
reactant: 248817
reactant: 248829
product: 248853
kinetic law: 248865
notes: GENE_ASSOCIATION: b3161 SUBSYSTEM: Transport Inner Membrane
fast: false
type: Reaction

196357
value: 0.0
type: LocalParameter

300900
stoichiometry: 1.0
species: 179105
type: SpeciesReference

185409
value: 0.0
type: LocalParameter

193605
value: 0.0
type: LocalParameter

205543
stoichiometry: 1.0
species: 178743
type: SpeciesReference

282159
stoichiometry: 1.0
species: 178745
type: SpeciesReference

179445
notes: FORMULA: C34H30FeN4O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Protoheme
type: Species

188321
value: 0.0
type: LocalParameter

290391
stoichiometry: 1.0
species: 178038
type: SpeciesReference

178641
notes: FORMULA: C16H23N5O16P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: GDP-D-mannose
type: Species

179231
notes: FORMULA: O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: O2
type: Species

292563
stoichiometry: 1.0
species: 178838
type: SpeciesReference

280547
stoichiometry: 1.0
species: 179409
type: SpeciesReference

227116
stoichiometry: 1.0
species: 178173
type: SpeciesReference

157740
stoichiometry: 1.0
species: 179251
type: SpeciesReference

187396
value: 0.0
type: LocalParameter

206310
stoichiometry: 1.0
species: 177842
type: SpeciesReference

245507
stoichiometry: 1.0
species: 178769
type: SpeciesReference

238094
stoichiometry: 1.0
species: 178688
type: SpeciesReference

196356
value: 0.0
type: LocalParameter

190736
value: 0.0
type: LocalParameter

254504
stoichiometry: 1.0
species: 177466
type: SpeciesReference

237124
stoichiometry: 1.0
species: 179501
type: SpeciesReference

183261
stoichiometry: 1.0
species: 178743
type: SpeciesReference

187162
stoichiometry: 1.0
species: 178743
type: SpeciesReference

188111
value: 0.0
type: LocalParameter

185421
value: -1000.0
type: LocalParameter

178633
notes: FORMULA: C7H15NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: gamma-butyrobetaine
type: Species

158240
stoichiometry: 1.0
species: 178173
type: SpeciesReference

230604
stoichiometry: 1.0
species: 177308
type: SpeciesReference

179211
notes: FORMULA: NO
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Nitric-oxide
type: Species

186234
value: 0.0
type: LocalParameter

182757
product: 244148
reactant: 244112
reversible: false
name: homocysteine S methyltransferase
reactant: 244100
fast: false
notes: GENE_ASSOCIATION: b0261 SUBSYSTEM: Methionine Metabolism
type: Reaction
kinetic law: 244160
product: 244136
product: 244124

180289
stoichiometry: 1.0
species: 178820
type: SpeciesReference

174916
stoichiometry: 1.0
species: 179173
type: SpeciesReference

160575
stoichiometry: 1.0
species: 179173
type: SpeciesReference

189706
value: 1000.0
type: LocalParameter

188339
value: 0.0
type: LocalParameter

182541
type: Reaction
kinetic law: 239627
notes: GENE_ASSOCIATION: ( b4208 or b1801 ) SUBSYSTEM: Transport Inner Membrane
name: glycine transport in via proton symport periplasm
product: 239603
fast: false
reactant: 239578
reversible: false
product: 239615
reactant: 239590

185420
value: 0.0
type: LocalParameter

188338
value: 1000.0
type: LocalParameter

188112
value: 0.0
type: LocalParameter

178634
notes: FORMULA: C7H15NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: gamma-butyrobetaine
type: Species

178059
notes: FORMULA: C6H12N2O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Alanyl-D-alanine
type: Species

197329
value: 1000.0
type: LocalParameter

239446
stoichiometry: 1.0
species: 179113
type: SpeciesReference

278877
stoichiometry: 1.0
species: 178173
type: SpeciesReference

281785
stoichiometry: 1.0
species: 179429
type: SpeciesReference

252619
stoichiometry: 1.0
species: 178288
type: SpeciesReference

196790
value: 0.0
type: LocalParameter

190738
value: 0.0
type: LocalParameter

189709
value: 0.0
type: LocalParameter

190023
value: 0.0
type: LocalParameter

178635
notes: FORMULA: C2H4O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Glycolaldehyde
type: Species

244945
stoichiometry: 1.0
species: 178016
type: SpeciesReference

282737
stoichiometry: 1.0
species: 178739
type: SpeciesReference

188113
value: -1000.0
type: LocalParameter

263068
stoichiometry: 1.0
species: 178739
type: SpeciesReference

174130
stoichiometry: 1.0
species: 178085
type: SpeciesReference

181039
kinetic law: 172424
reversible: false
product: 172388
name: aldehyde dehydrogenase propanal NADP
reactant: 172352
type: Reaction
reactant: 172376
reactant: 172364
fast: false
product: 172400
notes: GENE_ASSOCIATION: b3588 SUBSYSTEM: Alternate Carbon Metabolism
product: 172412

186232
value: 1000.0
type: LocalParameter

196791
value: 0.0
type: LocalParameter

223203
stoichiometry: 1.0
species: 178745
type: SpeciesReference

178637
notes: FORMULA: C10H12N5O11P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: GDP
type: Species

189708
stoichiometry: 1.0
species: 179317
type: SpeciesReference

190022
value: 0.0
type: LocalParameter

190737
value: 0.0
type: LocalParameter

235967
stoichiometry: 1.0
species: 178651
type: SpeciesReference

157303
stoichiometry: 1.0
species: 178173
type: SpeciesReference

178636
notes: FORMULA: C10H12N5O11P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: GDP
type: Species

258607
stoichiometry: 1.0
species: 178950
type: SpeciesReference

179210
stoichiometry: 1.0
species: 179241
type: SpeciesReference

237839
stoichiometry: 1.0
species: 177941
type: SpeciesReference

182754
kinetic law: 244088
reversible: true
reactant: 244040
product: 244076
name: HCO3 equilibration reaction
notes: GENE_ASSOCIATION: ( b0339 or b0126 ) SUBSYSTEM: Unassigned
fast: false
reactant: 244052
product: 244064
type: Reaction

296035
stoichiometry: 1.0
species: 179691
type: SpeciesReference

297622
stoichiometry: 1.0
species: 178173
type: SpeciesReference

265966
stoichiometry: 1.0
species: 179167
type: SpeciesReference

178638
notes: FORMULA: C10H12N5O11P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: GDP
type: Species

222087
stoichiometry: 1.0
species: 178737
type: SpeciesReference

185426
value: 0.0
type: LocalParameter

190029
value: 0.0
type: LocalParameter

189703
value: 0.0
type: LocalParameter

235520
stoichiometry: 1.0
species: 180020
type: SpeciesReference

282388
stoichiometry: 1.0
species: 179467
type: SpeciesReference

186239
value: 1000.0
type: LocalParameter

219145
stoichiometry: 1.0
species: 179651
type: SpeciesReference

197325
value: 0.0
type: LocalParameter

157087
stoichiometry: 1.0
species: 177396
type: SpeciesReference

299988
stoichiometry: 1.0
species: 178173
type: SpeciesReference

181037
name: aldehyde dehydrogenase acetaldehyde NADP
fast: false
type: Reaction
notes: GENE_ASSOCIATION: b3588 SUBSYSTEM: Alternate Carbon Metabolism
reactant: 172280
product: 172304
reversible: false
kinetic law: 172340
reactant: 172268
product: 172328
product: 172316
reactant: 172292

180285
kinetic law: 156316
product: 156303
reactant: 156291
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: 23cCMP transport via diffusion extracellular to periplasm
type: Reaction

189702
value: 0.0
type: LocalParameter

179215
notes: FORMULA: C123H200N2O57P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: O16-antigen-x2-undecaprenyl-diphosphate
type: Species

194071
value: 0.0
type: LocalParameter

178639
notes: FORMULA: C16H21N5O15P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: GDP-4-dehydro-6-deoxy-D-mannose
type: Species

211028
stoichiometry: 1.0
species: 179805
type: SpeciesReference

185425
value: 0.0
type: LocalParameter

205337
stoichiometry: 1.0
species: 177368
type: SpeciesReference

197324
value: 1000.0
type: LocalParameter

182978
reactant: 248769
notes: GENE_ASSOCIATION: ( b3265 and b3266 ) SUBSYSTEM: Transport Inner Membrane
kinetic law: 248805
fast: false
product: 248781
name: Indole transport via proton symport irreversible periplasm
type: Reaction
reversible: false
reactant: 248757
product: 248793

183929
product: 271720
reversible: false
type: Reaction
kinetic law: 271744
product: 271732
name: Nucleoside triphosphate pyrophosphorylase atp
product: 271708
reactant: 271684
notes: GENE_ASSOCIATION: b2781 SUBSYSTEM: Nucleotide Salvage Pathway
fast: false
reactant: 271696

181038
stoichiometry: 1.0
species: 178178
type: SpeciesReference

188116
value: 1000.0
type: LocalParameter

185424
value: 0.0
type: LocalParameter

241803
stoichiometry: 1.0
species: 178739
type: SpeciesReference

242178
stoichiometry: 1.0
species: 178723
type: SpeciesReference

194070
value: 1000.0
type: LocalParameter

180288
kinetic law: 156355
product: 156342
reactant: 156329
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: 23cGMP transport via diffusion extracellular to periplasm
type: Reaction

309238
stoichiometry: 1.0
species: 178737
type: SpeciesReference

233245
stoichiometry: 1.0
species: 178608
type: SpeciesReference

186236
value: 0.0
type: LocalParameter

284729
stoichiometry: 1.0
species: 178739
type: SpeciesReference

181035
reactant: 172184
fast: false
reactant: 172208
product: 172220
type: Reaction
product: 172244
reversible: false
product: 172232
kinetic law: 172256
reactant: 172196
name: aldehyde dehydrogenase acetaldehyde NAD
notes: GENE_ASSOCIATION: b1300 SUBSYSTEM: Alternate Carbon Metabolism

182751
kinetic law: 244028
product: 244016
reactant: 244004
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: 3 hydroxycinnamic acid transport via diffusion extracellular to periplasm
type: Reaction

197328
value: 0.0
type: LocalParameter

188117
value: 0.0
type: LocalParameter

185423
value: 1000.0
type: LocalParameter

179213
notes: FORMULA: NO
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Nitric-oxide
type: Species

190026
value: 1000.0
type: LocalParameter

188119
value: 0.0
type: LocalParameter

275828
stoichiometry: 1.0
species: 179331
type: SpeciesReference

165296
stoichiometry: 1.0
species: 179982
type: SpeciesReference

167304
stoichiometry: 1.0
species: 177993
type: SpeciesReference

193611
value: 0.0
type: LocalParameter

186237
value: 0.0
type: LocalParameter

197327
value: 0.0
type: LocalParameter

270307
stoichiometry: 1.0
species: 178085
type: SpeciesReference

252040
stoichiometry: 1.0
species: 179169
type: SpeciesReference

199799
value: 1000.0
type: LocalParameter

183924
notes: GENE_ASSOCIATION: ( b2781 or b2251 or b1759 ) SUBSYSTEM: Nucleotide Salvage Pathway
kinetic law: 271527
product: 271502
fast: false
product: 271490
type: Reaction
name: Nucleoside triphosphate pyrophosphorylase dctp
product: 271515
reactant: 271466
reversible: false
reactant: 271478

179219
notes: FORMULA: C312H523N6O200P4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: O16-antigen-x4-core-oligosaccharide-lipid-A
type: Species

195118
value: 0.0
type: LocalParameter

253287
stoichiometry: 1.0
species: 178692
type: SpeciesReference

218253
stoichiometry: 1.0
species: 179109
type: SpeciesReference

197321
value: 0.0
type: LocalParameter

187606
value: 1000.0
type: LocalParameter

195891
value: 0.0
type: LocalParameter

278394
stoichiometry: 1.0
species: 179167
type: SpeciesReference

199798
stoichiometry: 1.0
species: 178743
type: SpeciesReference

183925
reversible: false
notes: GENE_ASSOCIATION: ( b2781 or b1759 ) SUBSYSTEM: Nucleotide Salvage Pathway
product: 271588
product: 271563
name: Nucleoside triphosphate pyrophosphorylase ctp
type: Reaction
fast: false
reactant: 271551
reactant: 271539
product: 271575
kinetic law: 271600

195117
value: 0.0
type: LocalParameter

162196
stoichiometry: 1.0
species: 178016
type: SpeciesReference

179006
notes: FORMULA: C5H11NO3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Methionine-Sulfoxide
type: Species

196798
value: 0.0
type: LocalParameter

160154
stoichiometry: 1.0
species: 177631
type: SpeciesReference

226618
stoichiometry: 1.0
species: 178540
type: SpeciesReference

196797
value: 0.0
type: LocalParameter

197320
value: 0.0
type: LocalParameter

291959
stoichiometry: 1.0
species: 179603
type: SpeciesReference

181886
kinetic law: 217635
reactant: 217623
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: L Leucine exchange
type: Reaction

189936
value: 1000.0
type: LocalParameter

179217
notes: FORMULA: C157H255N3O82P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: O16-antigen-x3-undecaprenyl-diphosphate
type: Species

182549
stoichiometry: 1.0
species: 178743
type: SpeciesReference

202425
stoichiometry: 1.0
species: 178743
type: SpeciesReference

196799
value: 1000.0
type: LocalParameter

254941
stoichiometry: 1.0
species: 177550
type: SpeciesReference

179003
stoichiometry: 1.0
species: 179731
type: SpeciesReference

181883
kinetic law: 217586
reactant: 217574
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: L Lactate exchange
type: Reaction

223444
stoichiometry: 1.0
species: 178085
type: SpeciesReference

293085
stoichiometry: 1.0
species: 178342
type: SpeciesReference

189939
value: 0.0
type: LocalParameter

225656
stoichiometry: 2.0
species: 178529
type: SpeciesReference

199796
value: -1000.0
type: LocalParameter

183701
kinetic law: 264348
reactant: 264299
notes: GENE_ASSOCIATION: b2392 SUBSYSTEM: Transport Inner Membrane
type: Reaction
reversible: false
product: 264336
product: 264324
fast: false
name: manganese Mn2 transport in via proton symport periplasm
reactant: 264311

183927
reactant: 271624
type: Reaction
reactant: 271612
reversible: false
fast: false
product: 271660
name: Nucleoside triphosphate pyrophosphorylase datp
product: 271636
product: 271648
kinetic law: 271672
notes: GENE_ASSOCIATION: ( b2781 or b1865 ) SUBSYSTEM: Nucleotide Salvage Pathway

195115
value: 1000.0
type: LocalParameter

179004
notes: FORMULA: C5H11NO3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: L-methionine-R-sulfoxide
type: Species

197322
value: 0.0
type: LocalParameter

181884
kinetic law: 217611
reactant: 217599
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Lactose exchange
type: Reaction

187607
value: 0.0
type: LocalParameter

195114
value: 0.0
type: LocalParameter

166893
stoichiometry: 1.0
species: 177987
type: SpeciesReference

195890
value: 0.0
type: LocalParameter

189932
value: 0.0
type: LocalParameter

265111
stoichiometry: 1.0
species: 177891
type: SpeciesReference

181880
kinetic law: 217538
reactant: 217526
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: KDO 2 lipid IV A exchange
type: Reaction

183920
product: 271358
reactant: 271334
reversible: false
product: 271370
type: Reaction
notes: GENE_ASSOCIATION: b2954 SUBSYSTEM: Nucleotide Salvage Pathway
reactant: 271322
product: 271346
kinetic law: 271382
name: Nucleoside triphosphate pyrophosphorylase xtp
fast: false

202111
stoichiometry: 1.0
species: 178511
type: SpeciesReference

182547
kinetic law: 239723
product: 239711
reactant: 239699
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: Glycine transport via diffusion extracellular to periplasm
type: Reaction

269656
stoichiometry: 1.0
species: 178739
type: SpeciesReference

195113
value: 0.0
type: LocalParameter

291321
stoichiometry: 1.0
species: 178016
type: SpeciesReference

196792
value: 1000.0
type: LocalParameter

252401
stoichiometry: 1.0
species: 178743
type: SpeciesReference

181881
kinetic law: 217562
reactant: 217550
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: D lactate exchange
type: Reaction

251024
stoichiometry: 1.0
species: 178016
type: SpeciesReference

299140
stoichiometry: 1.0
species: 178581
type: SpeciesReference

249359
stoichiometry: 1.0
species: 179169
type: SpeciesReference

261537
stoichiometry: 1.0
species: 178992
type: SpeciesReference

234598
stoichiometry: 1.0
species: 179573
type: SpeciesReference

265737
stoichiometry: 1.0
species: 178737
type: SpeciesReference

195112
value: 0.0
type: LocalParameter

187609
value: 0.0
type: LocalParameter

277279
stoichiometry: 1.0
species: 179345
type: SpeciesReference

183922
notes: GENE_ASSOCIATION: ( b0099 or b2781 ) SUBSYSTEM: Nucleotide Salvage Pathway
name: Nucleoside triphosphate pyrophosphorylase gtp
kinetic law: 271454
product: 271418
type: Reaction
fast: false
product: 271442
reactant: 271406
product: 271430
reactant: 271394
reversible: false

159984
stoichiometry: 1.0
species: 178737
type: SpeciesReference

223868
stoichiometry: 1.0
species: 178514
type: SpeciesReference

181669
kinetic law: 213390
reactant: 213377
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 3 GMP exchange
type: Reaction

206177
stoichiometry: 1.0
species: 179167
type: SpeciesReference

196794
value: 0.0
type: LocalParameter

255449
stoichiometry: 1.0
species: 179381
type: SpeciesReference

179008
notes: FORMULA: C5H11NO3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: L-Methionine-Sulfoxide
type: Species

302049
stoichiometry: 1.0
species: 179874
type: SpeciesReference

189933
value: 0.0
type: LocalParameter

274798
stoichiometry: 1.0
species: 179297
type: SpeciesReference

182544
kinetic law: 239687
notes: GENE_ASSOCIATION: b0007 SUBSYSTEM: Transport Inner Membrane
reactant: 239639
fast: false
reversible: false
name: glycine transport in via sodium symport periplasm
type: Reaction
reactant: 239651
product: 239675
product: 239663

158459
stoichiometry: 1.0
species: 179501
type: SpeciesReference

158031
stoichiometry: 1.0
species: 177439
type: SpeciesReference

202849
stoichiometry: 1.0
species: 178016
type: SpeciesReference

233666
stoichiometry: 1.0
species: 178743
type: SpeciesReference

195110
value: 1000.0
type: LocalParameter

212265
stoichiometry: 1.0
species: 178825
type: SpeciesReference

181668
kinetic law: 213365
reactant: 213353
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 3 cmp exchange
type: Reaction

172593
stoichiometry: 1.0
species: 178064
type: SpeciesReference

191401
value: 0.0
type: LocalParameter

275223
stoichiometry: 1.0
species: 178016
type: SpeciesReference

179010
notes: FORMULA: C5H11NO3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: L-Methionine-Sulfoxide
type: Species

183707
product: 264507
fast: false
reactant: 264471
reversible: false
product: 264495
name: 3 deoxy D manno octulosonic acid transferase
type: Reaction
reactant: 264483
product: 264519
notes: GENE_ASSOCIATION: b3633 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
kinetic law: 264531

187387
value: 0.0
type: LocalParameter

181667
kinetic law: 213341
reactant: 213329
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 3 AMP exchange
type: Reaction

191400
value: 1000.0
type: LocalParameter

196340
value: 0.0
type: LocalParameter

296498
stoichiometry: 1.0
species: 179719
type: SpeciesReference

186682
stoichiometry: 2.0
species: 178080
type: SpeciesReference

284945
stoichiometry: 1.0
species: 178739
type: SpeciesReference

196839
value: 0.0
type: LocalParameter

195888
value: 0.0
type: LocalParameter

232735
stoichiometry: 1.0
species: 178606
type: SpeciesReference

179437
notes: FORMULA: C29H38N7O17P3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Phenylacetyl-CoA
type: Species

294619
stoichiometry: 1.0
species: 179693
type: SpeciesReference

260594
stoichiometry: 1.0
species: 179595
type: SpeciesReference

181666
kinetic law: 213317
reactant: 213305
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 3 4 Dihydroxyphenylacetaldehyde exchange
type: Reaction

196343
value: 0.0
type: LocalParameter

183709
reactant: 264555
reversible: false
reactant: 264543
product: 264591
type: Reaction
kinetic law: 264603
notes: GENE_ASSOCIATION: b3624 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
product: 264567
fast: false
name: 3 deoxy D manno octulosonic acid transferase III LPS core biosynthesis
product: 264579

187385
value: 1000.0
type: LocalParameter

187610
value: 0.0
type: LocalParameter

181665
kinetic law: 213293
reactant: 213281
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 2 Dehydro 3 deoxy D gluconate exchange
type: Reaction

285689
stoichiometry: 1.0
species: 179477
type: SpeciesReference

234379
stoichiometry: 1.0
species: 178645
type: SpeciesReference

196342
value: 0.0
type: LocalParameter

223662
stoichiometry: 1.0
species: 179167
type: SpeciesReference

166674
stoichiometry: 1.0
species: 178510
type: SpeciesReference

195886
value: 1000.0
type: LocalParameter

179435
notes: FORMULA: C42H77O13P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Phosphatidylglycerophosphate-dioctadec-11-enoyl-n-C181
type: Species

187611
value: 1000.0
type: LocalParameter

209260
stoichiometry: 1.0
species: 178278
type: SpeciesReference

247975
stoichiometry: 1.0
species: 178743
type: SpeciesReference

195884
value: 0.0
type: LocalParameter

180094
stoichiometry: 1.0
species: 178283
type: SpeciesReference

181664
kinetic law: 213269
reactant: 213257
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: meso 2 6 Diaminoheptanedioate exchange
type: Reaction

191405
value: 1000.0
type: LocalParameter

187613
value: 0.0
type: LocalParameter

196834
value: 1000.0
type: LocalParameter

195109
value: -1000.0
type: LocalParameter

179014
notes: FORMULA: Mg
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: magnesium
type: Species

182328
product: 231815
product: 231803
kinetic law: 231827
fast: false
name: glutamate 5 semialdehyde dehydrogenase
product: 231791
reversible: false
reactant: 231767
type: Reaction
reactant: 231754
notes: GENE_ASSOCIATION: b0243 SUBSYSTEM: Arginine and Proline Metabolism
reactant: 231779

183703
kinetic law: 264385
product: 264373
reactant: 264360
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: Manganese Mn2 transport via diffusion extracellular to periplasm
type: Reaction

191404
value: 0.0
type: LocalParameter

195883
value: 0.0
type: LocalParameter

291777
stoichiometry: 1.0
species: 179105
type: SpeciesReference

201629
stoichiometry: 1.0
species: 179177
type: SpeciesReference

261754
stoichiometry: 1.0
species: 179008
type: SpeciesReference

305302
stoichiometry: 2.0
species: 178745
type: SpeciesReference

288373
stoichiometry: 1.0
species: 179531
type: SpeciesReference

181663
kinetic law: 213245
reactant: 213233
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 2 3 diaminopropionate exchange
type: Reaction

181889
kinetic law: 217683
reactant: 217671
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: KDO 2 lipid A exchange
type: Reaction

187614
value: 0.0
type: LocalParameter

190740
stoichiometry: 1.0
species: 178262
type: SpeciesReference

189929
value: 0.0
type: LocalParameter

179870
notes: FORMULA: C12H22O11
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Trehalose
type: Species

199795
value: 0.0
type: LocalParameter

279312
stoichiometry: 1.0
species: 178743
type: SpeciesReference

167752
stoichiometry: 1.0
species: 178743
type: SpeciesReference

191403
value: 0.0
type: LocalParameter

236328
stoichiometry: 1.0
species: 178085
type: SpeciesReference

187615
value: 0.0
type: LocalParameter

257763
stoichiometry: 1.0
species: 178743
type: SpeciesReference

181662
kinetic law: 213221
reactant: 213209
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 2 3 Cyclic UMP exchange
type: Reaction

218034
stoichiometry: 1.0
species: 178994
type: SpeciesReference

196836
value: 0.0
type: LocalParameter

277498
stoichiometry: 1.0
species: 179463
type: SpeciesReference

195107
value: 0.0
type: LocalParameter

199792
value: 0.0
type: LocalParameter

181661
kinetic law: 213197
reactant: 213185
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 2 3 Cyclic GMP exchange
type: Reaction

183705
product: 264422
fast: false
name: 3 deoxy D manno octulosonic acid transferase
reactant: 264398
type: Reaction
reversible: false
notes: GENE_ASSOCIATION: b3633 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
product: 264447
product: 264434
reactant: 264410
kinetic law: 264459

178061
notes: FORMULA: C5H7O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: S-2-Acetolactate
type: Species

241394
stoichiometry: 1.0
species: 178707
type: SpeciesReference

259174
stoichiometry: 2.0
species: 179467
type: SpeciesReference

179012
notes: FORMULA: C5H10NOSR
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Methionyl-tRNA-Met
type: Species

159104
stoichiometry: 1.0
species: 177607
type: SpeciesReference

195881
value: 0.0
type: LocalParameter

181887
kinetic law: 217659
reactant: 217647
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: cold adapted KDO 2 lipid A exchange
type: Reaction

251243
stoichiometry: 1.0
species: 178289
type: SpeciesReference

273062
stoichiometry: 1.0
species: 179233
type: SpeciesReference

270756
stoichiometry: 1.0
species: 178820
type: SpeciesReference

195108
value: 0.0
type: LocalParameter

181660
kinetic law: 213173
reactant: 213161
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: 2 3 Cyclic CMP exchange
type: Reaction

283304
stoichiometry: 1.0
species: 177415
type: SpeciesReference

178062
notes: FORMULA: C3H6NOR
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Alanyl-tRNA-Ala
type: Species

182327
product: 231717
kinetic law: 231742
name: L glutamate 5 semialdehyde dehydratase spontaneous
reactant: 231693
type: Reaction
product: 231705
product: 231730
reversible: false
fast: false
notes: GENE_ASSOCIATION: s0001 SUBSYSTEM: Arginine and Proline Metabolism

179439
notes: FORMULA: C9H11NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Phenylalanine
type: Species

156381
stoichiometry: 1.0
species: 177349
type: SpeciesReference

182015
kinetic law: 219712
reactant: 219700
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Thiosulfate exchange
type: Reaction

179873
stoichiometry: 1.0
species: 178163
type: SpeciesReference

182324
kinetic law: 231621
product: 231609
reactant: 231597
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: glycerophosphserine transport via diffusion extracellular to periplasm
type: Reaction

207035
stoichiometry: 1.0
species: 177529
type: SpeciesReference

188330
value: 1000.0
type: LocalParameter

194075
value: 1000.0
type: LocalParameter

191409
value: 0.0
type: LocalParameter

193613
value: 1000.0
type: LocalParameter

181045
kinetic law: 172617
product: 172605
reactant: 172593
notes: GENE_ASSOCIATION: b4090 SUBSYSTEM: Alternate Carbon Metabolism
fast: false
reversible: true
name: Allose 6 phosphate isomerase
type: Reaction

176470
stoichiometry: 1.0
species: 178143
type: SpeciesReference

303294
stoichiometry: 1.0
species: 178085
type: SpeciesReference

260388
stoichiometry: 1.0
species: 179121
type: SpeciesReference

182325
product: 231657
name: glycerol 3 phosphatase
product: 231669
fast: false
type: Reaction
kinetic law: 231681
notes: GENE_ASSOCIATION: b0822 SUBSYSTEM: Alternate Carbon Metabolism
reactant: 231645
reversible: false
reactant: 231633

179874
notes: FORMULA: C12H22O11
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Trehalose
type: Species

187380
value: 0.0
type: LocalParameter

196349
value: 0.0
type: LocalParameter

196831
stoichiometry: 1.0
species: 178737
type: SpeciesReference

182975
kinetic law: 248745
product: 248733
reactant: 248721
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: IMP transport via diffusion extracellular to periplasm
type: Reaction

178064
notes: FORMULA: C6H11O9P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Allose-6-phosphate
type: Species

193612
value: 0.0
type: LocalParameter

191408
value: 0.0
type: LocalParameter

185418
value: 1000.0
type: LocalParameter

182322
reactant: 231524
fast: false
reactant: 231512
reversible: false
notes: GENE_ASSOCIATION: ( b3452 and b3453 and b3450 and b3451 ) SUBSYSTEM: Transport Inner Membrane
reactant: 231500
name: sn glycerol 3 phosphoserine transport via ABC system periplasm
product: 231560
kinetic law: 231585
product: 231548
product: 231572
type: Reaction
product: 231536

178065
notes: FORMULA: C6H12O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Allose
type: Species

180294
product: 156447
type: Reaction
fast: false
name: 2 3 diaminopropionate transport in via proton symport
product: 156433
kinetic law: 156459
notes: GENE_ASSOCIATION: SUBSYSTEM: Transport Inner Membrane
reactant: 156407
reactant: 156420
reversible: false

182972
product: 248673
fast: false
reactant: 248637
product: 248697
reversible: false
notes: GENE_ASSOCIATION: b2508 SUBSYSTEM: Purine and Pyrimidine Biosynthesis
reactant: 248661
name: IMP dehydrogenase
kinetic law: 248709
reactant: 248649
type: Reaction
product: 248685

160997
stoichiometry: 1.0
species: 178743
type: SpeciesReference

196832
value: 0.0
type: LocalParameter

191407
value: 0.0
type: LocalParameter

181043
reactant: 172532
name: Allose kinase
product: 172545
type: Reaction
fast: false
product: 172569
notes: GENE_ASSOCIATION: b4084 SUBSYSTEM: Alternate Carbon Metabolism
reversible: false
kinetic law: 172581
reactant: 172520
product: 172557

190741
value: 1000.0
type: LocalParameter

194073
value: 0.0
type: LocalParameter

193615
value: 0.0
type: LocalParameter

182321
kinetic law: 231488
product: 231476
reactant: 231464
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: glycero 3 phospho 1 inositol transport via diffusion extracellular to periplasm
type: Reaction

185415
value: 0.0
type: LocalParameter

235749
stoichiometry: 1.0
species: 178663
type: SpeciesReference

266366
stoichiometry: 1.0
species: 179167
type: SpeciesReference

276608
stoichiometry: 1.0
species: 177191
type: SpeciesReference

179872
notes: FORMULA: C12H22O11
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Trehalose
type: Species

260160
stoichiometry: 1.0
species: 178050
type: SpeciesReference

262117
stoichiometry: 1.0
species: 179012
type: SpeciesReference

196833
value: 0.0
type: LocalParameter

297404
stoichiometry: 1.0
species: 178575
type: SpeciesReference

224425
stoichiometry: 1.0
species: 178512
type: SpeciesReference

190742
value: 0.0
type: LocalParameter

194074
value: 0.0
type: LocalParameter

185416
value: 0.0
type: LocalParameter

229387
stoichiometry: 1.0
species: 178571
type: SpeciesReference

178067
notes: FORMULA: C6H12O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Allose
type: Species

256390
stoichiometry: 1.0
species: 178366
type: SpeciesReference

215577
stoichiometry: 1.0
species: 178508
type: SpeciesReference

188334
value: 0.0
type: LocalParameter

187383
value: 0.0
type: LocalParameter

227863
stoichiometry: 1.0
species: 178544
type: SpeciesReference

178630
notes: FORMULA: C7H14N2O8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: N1-5-Phospho-D-ribosyl-glycinamide
type: Species

271904
stoichiometry: 1.0
species: 178737
type: SpeciesReference

196345
value: 1000.0
type: LocalParameter

300912
stoichiometry: 1.0
species: 179847
type: SpeciesReference

205555
stoichiometry: 1.0
species: 179173
type: SpeciesReference

193617
value: 0.0
type: LocalParameter

190747
value: 1000.0
type: LocalParameter

181041
reactant: 172460
type: Reaction
kinetic law: 172508
product: 172472
product: 172484
name: aldehyde dehydrogenase butanal NAD
reactant: 172436
product: 172496
notes: GENE_ASSOCIATION: SUBSYSTEM: Alternate Carbon Metabolism
reversible: false
fast: false
reactant: 172448

240304
stoichiometry: 1.0
species: 178173
type: SpeciesReference

292575
stoichiometry: 1.0
species: 178468
type: SpeciesReference

194079
value: 0.0
type: LocalParameter

280559
stoichiometry: 1.0
species: 179381
type: SpeciesReference

174796
stoichiometry: 2.0
species: 178743
type: SpeciesReference

186230
value: 0.0
type: LocalParameter

157752
stoichiometry: 1.0
species: 178085
type: SpeciesReference

187384
value: -1000.0
type: LocalParameter

188333
value: 0.0
type: LocalParameter

178068
notes: FORMULA: C6H12O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Allose
type: Species

179433
notes: FORMULA: C42H77O13P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Phosphatidylglycerophosphate-dioctadec-11-enoyl-n-C181
type: Species

179878
notes: FORMULA: R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: tRNA-Arg
type: Species

178632
notes: FORMULA: C7H15NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: gamma-butyrobetaine
type: Species

168268
stoichiometry: 1.0
species: 178737
type: SpeciesReference

193619
value: 1000.0
type: LocalParameter

185419
value: 0.0
type: LocalParameter

190745
value: 0.0
type: LocalParameter

194077
value: 0.0
type: LocalParameter

168991
stoichiometry: 1.0
species: 178085
type: SpeciesReference

235301
stoichiometry: 1.0
species: 178657
type: SpeciesReference

179431
notes: FORMULA: C42H81O13P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Phosphatidylglycerophosphate-dioctadecanoyl-n-C180
type: Species

261041
stoichiometry: 1.0
species: 178743
type: SpeciesReference

180291
kinetic law: 156394
product: 156381
reactant: 156368
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: 23cUMP transport via diffusion extracellular to periplasm
type: Reaction

196347
value: 0.0
type: LocalParameter

178631
notes: FORMULA: C77H125N1O22P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: glucosyl-O-acetyl-rhamanosyl-N-acetylglucosamyl-undecaprenyl-diphosphate
type: Species

188335
value: 0.0
type: LocalParameter

179876
notes: FORMULA: R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: tRNA-Ala
type: Species

190746
value: 0.0
type: LocalParameter

193618
value: 0.0
type: LocalParameter

274448
stoichiometry: 1.0
species: 178743
type: SpeciesReference

194078
value: 0.0
type: LocalParameter

184167
fast: false
reactant: 282737
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
reversible: false
name: Phospholipase A1 phosphatidate n C161 periplasm
product: 282761
kinetic law: 282785
product: 282773
reactant: 282749
type: Reaction

194829
value: -1000.0
type: LocalParameter

198160
value: 1000.0
type: LocalParameter

226631
stoichiometry: 1.0
species: 178743
type: SpeciesReference

177189
notes: FORMULA: C35H64O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 1-2-Diacyl-sn-glycerol-dihexadec-9-enoyl-n-C161
type: Species

253457
stoichiometry: 1.0
species: 179261
type: SpeciesReference

309442
stoichiometry: 1.0
species: 179167
type: SpeciesReference

178056
notes: FORMULA: C6H12N2O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Alanyl-D-alanine
type: Species

294643
stoichiometry: 1.0
species: 179695
type: SpeciesReference

240316
stoichiometry: 1.0
species: 178654
type: SpeciesReference

261997
stoichiometry: 1.0
species: 179000
type: SpeciesReference

194828
value: 0.0
type: LocalParameter

269018
stoichiometry: 1.0
species: 179173
type: SpeciesReference

200391
value: 1000.0
type: LocalParameter

179865
notes: FORMULA: XH2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Reduced-thioredoxin
type: Species

199552
value: 0.0
type: LocalParameter

178055
notes: FORMULA: C3H7NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: L-Alanine
type: Species

184169
reactant: 282809
fast: false
name: Phospholipase A1 phosphatidate n C180 periplasm
reactant: 282797
kinetic law: 282846
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
product: 282834
reversible: false
type: Reaction
product: 282822

296642
stoichiometry: 1.0
species: 178743
type: SpeciesReference

194827
value: 0.0
type: LocalParameter

200394
value: 0.0
type: LocalParameter

161982
stoichiometry: 1.0
species: 178743
type: SpeciesReference

251485
stoichiometry: 1.0
species: 178743
type: SpeciesReference

178058
notes: FORMULA: C6H12N2O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Alanyl-D-alanine
type: Species

156567
stoichiometry: 1.0
species: 177338
type: SpeciesReference

216827
stoichiometry: 1.0
species: 178700
type: SpeciesReference

302862
stoichiometry: 1.0
species: 178737
type: SpeciesReference

209479
stoichiometry: 1.0
species: 178737
type: SpeciesReference

191910
value: 0.0
type: LocalParameter

196581
value: 0.0
type: LocalParameter

188570
value: 0.0
type: LocalParameter

179863
notes: FORMULA: X
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Oxidized-thioredoxin
type: Species

283547
stoichiometry: 1.0
species: 179936
type: SpeciesReference

180492
product: 160118
kinetic law: 160142
reversible: false
product: 160130
reactant: 160093
name: 3 nucleotidase UMP periplasm
fast: false
notes: GENE_ASSOCIATION: b4213 SUBSYSTEM: Nucleotide Salvage Pathway
type: Reaction
reactant: 160106

200396
value: 0.0
type: LocalParameter

225040
stoichiometry: 1.0
species: 178519
type: SpeciesReference

184163
name: Phospholipase A1 phosphatidate n C140 periplasm
product: 282593
reactant: 282556
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
reactant: 282568
fast: false
reversible: false
kinetic law: 282605
product: 282580
type: Reaction

180496
stoichiometry: 1.0
species: 178016
type: SpeciesReference

196582
value: 0.0
type: LocalParameter

194825
value: 1000.0
type: LocalParameter

179299
notes: FORMULA: C27H51O8P1
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 1-2-didodecanoyl-sn-glycerol-3-phosphate
type: Species

178052
notes: FORMULA: C3H7NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Alanine
type: Species

180495
product: 160190
fast: false
reactant: 160154
notes: GENE_ASSOCIATION: b4213 SUBSYSTEM: Nucleotide Salvage Pathway
reversible: false
product: 160178
reactant: 160166
type: Reaction
name: 3 nucleotidase CMP periplasm
kinetic law: 160202

215189
stoichiometry: 1.0
species: 178375
type: SpeciesReference

198164
value: 0.0
type: LocalParameter

258680
stoichiometry: 1.0
species: 178173
type: SpeciesReference

200395
value: 0.0
type: LocalParameter

234514
stoichiometry: 1.0
species: 179229
type: SpeciesReference

243750
stoichiometry: 1.0
species: 179167
type: SpeciesReference

184164
type: Reaction
kinetic law: 282665
product: 282641
name: Phospholipase A1 phosphatidate n C141 periplasm
fast: false
reactant: 282629
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
reversible: false
reactant: 282617
product: 282653

196583
value: 1000.0
type: LocalParameter

194824
value: 0.0
type: LocalParameter

243100
stoichiometry: 1.0
species: 178740
type: SpeciesReference

199339
value: 1000.0
type: LocalParameter

193447
value: 0.0
type: LocalParameter

198165
value: 1000.0
type: LocalParameter

261078
stoichiometry: 1.0
species: 178745
type: SpeciesReference

273233
stoichiometry: 1.0
species: 179281
type: SpeciesReference

179861
notes: FORMULA: C27H49N2O8PRS
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: trans-Hexadec-2-enoyl-acyl-carrier-protein
type: Species

289374
stoichiometry: 1.0
species: 178038
type: SpeciesReference

210240
stoichiometry: 1.0
species: 179171
type: SpeciesReference

220968
stoichiometry: 5.5E-5
species: 180000
type: SpeciesReference

273705
stoichiometry: 1.0
species: 177625
type: SpeciesReference

193448
value: 0.0
type: LocalParameter

194823
value: 0.0
type: LocalParameter

180498
product: 160250
reactant: 160214
notes: GENE_ASSOCIATION: b4213 SUBSYSTEM: Nucleotide Salvage Pathway
reactant: 160226
kinetic law: 160262
name: 3 nucleotidase AMP periplasm
product: 160238
fast: false
reversible: false
type: Reaction

204107
stoichiometry: 1.0
species: 178359
type: SpeciesReference

214781
stoichiometry: 1.0
species: 178298
type: SpeciesReference

179297
notes: FORMULA: C3H3N2O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Oxalureate
type: Species

198162
value: 0.0
type: LocalParameter

199987
value: 1000.0
type: LocalParameter

236352
stoichiometry: 1.0
species: 179501
type: SpeciesReference

184166
product: 282713
kinetic law: 282725
reactant: 282689
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
reversible: false
reactant: 282677
fast: false
name: Phospholipase A1 phosphatidate n C160 periplasm
type: Reaction
product: 282701

194822
value: 0.0
type: LocalParameter

196585
value: 0.0
type: LocalParameter

178053
notes: FORMULA: C3H7NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: L-Alanine
type: Species

199336
value: 0.0
type: LocalParameter

198163
value: 0.0
type: LocalParameter

199986
value: 0.0
type: LocalParameter

199985
value: 0.0
type: LocalParameter

178491
notes: FORMULA: C6H9N2O6P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-erythro-1-Imidazol-4-yl-glycerol-3-phosphate
type: Species

188575
value: 0.0
type: LocalParameter

172775
stoichiometry: 1.0
species: 178073
type: SpeciesReference

198168
value: 0.0
type: LocalParameter

195602
value: 0.0
type: LocalParameter

193441
value: 0.0
type: LocalParameter

295802
stoichiometry: 1.0
species: 177643
type: SpeciesReference

179295
notes: FORMULA: C2H2NO3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Oxamate
type: Species

186405
value: -1000.0
type: LocalParameter

177603
stoichiometry: 1.0
species: 178160
type: SpeciesReference

291789
stoichiometry: 2.0
species: 179235
type: SpeciesReference

181282
stoichiometry: 1.0
species: 178737
type: SpeciesReference

285449
stoichiometry: 1.0
species: 178956
type: SpeciesReference

183715
product: 264785
reactant: 264761
fast: false
notes: GENE_ASSOCIATION: b0134 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
product: 264797
reactant: 264749
reversible: false
name: 3 methyl 2 oxobutanoate hydroxymethyltransferase
type: Reaction
reactant: 264773
kinetic law: 264809

188576
stoichiometry: 1.0
species: 178265
type: SpeciesReference

195603
value: 0.0
type: LocalParameter

178492
notes: FORMULA: C112H202N3O42P3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: phosphoethanolamine-KDO-2-lipid-A
type: Species

198169
value: 0.0
type: LocalParameter

177601
notes: FORMULA: C17H34O7P1
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: 2-tetradecanoyl-sn-glycerol-3-phosphate
type: Species

193443
value: 1000.0
type: LocalParameter

186406
stoichiometry: 1.0
species: 178737
type: SpeciesReference

196587
value: 0.0
type: LocalParameter

200399
value: 1000.0
type: LocalParameter

181283
product: 183841
product: 183756
name: cob I alamin adenosyltransferase
reactant: 183732
notes: GENE_ASSOCIATION: b1270 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
reactant: 183720
type: Reaction
fast: false
reactant: 183744
reversible: true
kinetic law: 183853

156895
stoichiometry: 1.0
species: 177523
type: SpeciesReference

192894
value: 1000.0
type: LocalParameter

277461
stoichiometry: 1.0
species: 178743
type: SpeciesReference

303451
stoichiometry: 1.0
species: 179970
type: SpeciesReference

217961
stoichiometry: 1.0
species: 178974
type: SpeciesReference

188577
value: 0.0
type: LocalParameter

179293
notes: FORMULA: C5H3N2O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Orotate
type: Species

186402
value: 0.0
type: LocalParameter

196589
value: 1000.0
type: LocalParameter

195600
stoichiometry: 1.0
species: 178302
type: SpeciesReference

178493
notes: FORMULA: C112H202N3O42P3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: phosphoethanolamine-KDO-2-lipid-A
type: Species

178050
notes: FORMULA: C3H7NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Alanine
type: Species

196588
value: 0.0
type: LocalParameter

289798
stoichiometry: 1.0
species: 179671
type: SpeciesReference

192897
value: 0.0
type: LocalParameter

171891
stoichiometry: 1.0
species: 179155
type: SpeciesReference

199982
value: 0.0
type: LocalParameter

178494
notes: FORMULA: C30H27N3O15
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Enterochelin
type: Species

179294
stoichiometry: 1.0
species: 179501
type: SpeciesReference

175302
stoichiometry: 1.0
species: 178134
type: SpeciesReference

301480
stoichiometry: 1.0
species: 179817
type: SpeciesReference

188578
value: -1000.0
type: LocalParameter

198167
value: 0.0
type: LocalParameter

183717
product: 264833
reversible: false
notes: GENE_ASSOCIATION: ( b2519 or b0149 or b3396 ) SUBSYSTEM: Murein Biosynthesis
reactant: 264821
name: murein polymerizing transglycosylase
type: Reaction
kinetic law: 264870
fast: false
product: 264845
product: 264857

211614
stoichiometry: 1.0
species: 180116
type: SpeciesReference

166262
stoichiometry: 1.0
species: 178510
type: SpeciesReference

177604
notes: FORMULA: C26H40N7O26P5S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 2--5--triphosphoribosyl-3-dephospho-CoA
type: Species

193445
value: 0.0
type: LocalParameter

186404
value: 0.0
type: LocalParameter

210663
stoichiometry: 1.0
species: 179859
type: SpeciesReference

167764
stoichiometry: 1.0
species: 178787
type: SpeciesReference

181281
reactant: 183672
kinetic law: 183708
notes: GENE_ASSOCIATION: ( b3966 and ( b1252 and b3005 and b3006 ) ) SUBSYSTEM: Transport Outer Membrane
name: Cob 1 alamin transport via ton system extermal
reactant: 183660
reversible: false
fast: false
type: Reaction
product: 183696
product: 183684

241947
stoichiometry: 1.0
species: 178173
type: SpeciesReference

195606
value: 1000.0
type: LocalParameter

203198
stoichiometry: 1.0
species: 178173
type: SpeciesReference

186400
value: 1000.0
type: LocalParameter

192890
value: 0.0
type: LocalParameter

179291
notes: FORMULA: C5H3N2O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Orotate
type: Species

177607
notes: FORMULA: C8H8O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: 3-4-Dihydroxyphenylacetaldehyde
type: Species

207277
stoichiometry: 1.0
species: 178032
type: SpeciesReference

183719
reversible: false
notes: GENE_ASSOCIATION: ( b0149 or b2519 or b3396 ) SUBSYSTEM: Murein Biosynthesis
product: 264930
kinetic law: 264942
reactant: 264882
name: murein polymerizing transglycosylase 2 three linked units
type: Reaction
product: 264906
fast: false
reactant: 264894
product: 264918

233209
stoichiometry: 1.0
species: 180020
type: SpeciesReference

163143
stoichiometry: 1.0
species: 178085
type: SpeciesReference

188572
value: 0.0
type: LocalParameter

195607
value: 0.0
type: LocalParameter

261284
stoichiometry: 1.0
species: 178080
type: SpeciesReference

224872
stoichiometry: 1.0
species: 178518
type: SpeciesReference

165464
stoichiometry: 1.0
species: 178173
type: SpeciesReference

181287
reactant: 183973
fast: false
reactant: 183985
kinetic law: 184337
product: 184033
reactant: 183997
product: 184324
reversible: false
product: 184021
type: Reaction
product: 184045
name: carbamoyl phosphate synthase glutamine hydrolysing
notes: GENE_ASSOCIATION: ( b0032 and b0033 ) SUBSYSTEM: Arginine and Proline Metabolism
product: 184009
reactant: 183961

192179
value: 0.0
type: LocalParameter

256366
stoichiometry: 1.0
species: 177421
type: SpeciesReference

169802
stoichiometry: 1.0
species: 178092
type: SpeciesReference

216132
stoichiometry: 1.0
species: 178592
type: SpeciesReference

188573
value: 0.0
type: LocalParameter

195604
value: 0.0
type: LocalParameter

252864
stoichiometry: 1.0
species: 178882
type: SpeciesReference

192893
stoichiometry: 1.0
species: 178555
type: SpeciesReference

193440
value: 0.0
type: LocalParameter

286692
stoichiometry: 1.0
species: 178173
type: SpeciesReference

178490
notes: FORMULA: C151H234N12O67P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: enterobacterial-common-antigen-x4-undecaprenyl-diphosphate
type: Species

254734
stoichiometry: 1.0
species: 178737
type: SpeciesReference

188574
value: 1000.0
type: LocalParameter

192891
value: -1000.0
type: LocalParameter

181285
name: Carbamate kinase
fast: false
notes: GENE_ASSOCIATION: ( b0521 or b0323 or b2874 ) SUBSYSTEM: Unassigned
reversible: true
product: 183913
kinetic law: 183949
type: Reaction
product: 183901
reactant: 183877
product: 183937
reactant: 183865
reactant: 183889

302291
stoichiometry: 1.0
species: 179671
type: SpeciesReference

161312
stoichiometry: 1.0
species: 178906
type: SpeciesReference

252438
stoichiometry: 1.0
species: 178864
type: SpeciesReference

167548
stoichiometry: 1.0
species: 178737
type: SpeciesReference

261549
stoichiometry: 1.0
species: 178737
type: SpeciesReference

189397
value: 1000.0
type: LocalParameter

193899
value: 1000.0
type: LocalParameter

199766
value: 0.0
type: LocalParameter

178488
notes: FORMULA: C272H447N14O160P4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: enterobacterial-common-antigen-x4-core-oligosaccharide-lipid-A
type: Species

156342
stoichiometry: 1.0
species: 177343
type: SpeciesReference

303234
stoichiometry: 1.0
species: 178673
type: SpeciesReference

189943
value: 0.0
type: LocalParameter

298851
stoichiometry: 1.0
species: 179171
type: SpeciesReference

188120
value: 0.0
type: LocalParameter

182780
stoichiometry: 1.0
species: 178745
type: SpeciesReference

193898
value: -1000.0
type: LocalParameter

178487
notes: FORMULA: C127H198N9O52P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: enterobacterial-common-antigen-x3-undecaprenyl-diphosphate
type: Species

181279
name: Cob 1 alamin transport via ABC system periplasm
reactant: 183588
product: 183624
reactant: 183564
notes: GENE_ASSOCIATION: ( b1711 and b1709 and b0158 ) SUBSYSTEM: Transport Inner Membrane
reversible: false
reactant: 183576
kinetic law: 183648
type: Reaction
product: 183612
product: 183636
product: 183600
fast: false

172557
stoichiometry: 1.0
species: 178064
type: SpeciesReference

194247
stoichiometry: 2.0
species: 178278
type: SpeciesReference

192187
value: 0.0
type: LocalParameter

189946
value: 1000.0
type: LocalParameter

235761
stoichiometry: 1.0
species: 178664
type: SpeciesReference

189399
value: 0.0
type: LocalParameter

192189
value: 0.0
type: LocalParameter

232287
stoichiometry: 1.0
species: 178737
type: SpeciesReference

193294
stoichiometry: 1.0
species: 178743
type: SpeciesReference

289579
stoichiometry: 1.0
species: 179671
type: SpeciesReference

209891
stoichiometry: 1.0
species: 179167
type: SpeciesReference

296083
stoichiometry: 1.0
species: 179689
type: SpeciesReference

301105
stoichiometry: 1.0
species: 179851
type: SpeciesReference

195609
value: 0.0
type: LocalParameter

270549
stoichiometry: 1.0
species: 178707
type: SpeciesReference

192188
value: 0.0
type: LocalParameter

221584
stoichiometry: 1.0
species: 179335
type: SpeciesReference

193293
value: 1000.0
type: LocalParameter

166045
stoichiometry: 1.0
species: 179589
type: SpeciesReference

256583
stoichiometry: 1.0
species: 177433
type: SpeciesReference

253008
stoichiometry: 1.0
species: 178692
type: SpeciesReference

181277
fast: false
notes: GENE_ASSOCIATION: ( b1711 and b1709 and b0158 ) SUBSYSTEM: Transport Inner Membrane
reactant: 183381
kinetic law: 183552
reversible: false
product: 183528
product: 183516
product: 183540
reactant: 183405
name: Cobinamide transport via ABC system uptake periplasm
reactant: 183393
type: Reaction
product: 183418

178489
notes: FORMULA: C272H447N14O160P4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: enterobacterial-common-antigen-x4-core-oligosaccharide-lipid-A
type: Species

300682
stoichiometry: 1.0
species: 179643
type: SpeciesReference

195608
value: 0.0
type: LocalParameter

199765
value: 0.0
type: LocalParameter

243328
stoichiometry: 1.0
species: 177921
type: SpeciesReference

188121
value: 1000.0
type: LocalParameter

193895
value: 0.0
type: LocalParameter

293072
stoichiometry: 1.0
species: 179865
type: SpeciesReference

233426
stoichiometry: 1.0
species: 178627
type: SpeciesReference

189948
stoichiometry: 1.0
species: 179325
type: SpeciesReference

307857
stoichiometry: 1.0
species: 180179
type: SpeciesReference

178484
notes: FORMULA: C5H10O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 1-deoxy-D-xylulose
type: Species

192182
value: 0.0
type: LocalParameter

182784
type: Reaction
fast: false
product: 244678
name: heptosyltransferase II LPS core synthesis
reactant: 244630
product: 244666
notes: GENE_ASSOCIATION: b3620 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
reactant: 244642
product: 244654
kinetic law: 244690
reversible: false

226416
stoichiometry: 2.0
species: 178743
type: SpeciesReference

183711
product: 264651
kinetic law: 264700
reactant: 264639
reactant: 264615
reversible: false
reactant: 264627
name: molybdate transport via ABC system periplasm
product: 264688
type: Reaction
product: 264675
notes: GENE_ASSOCIATION: ( ( b2422 and b2425 and b2424 and b2423 ) or ( b0763 and b0764 and b0765 ) or ( b2422 and b2424 and b2423 and b3917 ) ) SUBSYSTEM: Inorganic Ion Transport and Metabolism
fast: false
product: 264663

191908
value: 0.0
type: LocalParameter

199762
value: 0.0
type: LocalParameter

191907
value: 1000.0
type: LocalParameter

193894
value: 1000.0
type: LocalParameter

308279
stoichiometry: 1.0
species: 178562
type: SpeciesReference

189949
value: 0.0
type: LocalParameter

202606
stoichiometry: 1.0
species: 177185
type: SpeciesReference

184389
stoichiometry: 1.0
species: 178016
type: SpeciesReference

188579
value: 1000.0
type: LocalParameter

178483
notes: FORMULA: C5H9O7P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 1-deoxy-D-xylulose-5-phosphate
type: Species

192183
value: 0.0
type: LocalParameter

252076
stoichiometry: 1.0
species: 178840
type: SpeciesReference

273584
stoichiometry: 1.0
species: 177574
type: SpeciesReference

193897
value: 0.0
type: LocalParameter

171188
stoichiometry: 1.0
species: 178056
type: SpeciesReference

182781
notes: GENE_ASSOCIATION: b3621 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
product: 244594
reversible: false
fast: false
reactant: 244570
product: 244606
kinetic law: 244618
reactant: 244558
type: Reaction
product: 244582
name: heptosyltransferase I LPS core synthesis

193290
value: 0.0
type: LocalParameter

282171
stoichiometry: 1.0
species: 179443
type: SpeciesReference

192184
value: 0.0
type: LocalParameter

285895
stoichiometry: 2.0
species: 179463
type: SpeciesReference

295415
stoichiometry: 1.0
species: 178720
type: SpeciesReference

178486
notes: FORMULA: C103H162N6O37P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: enterobacterial-common-antigen-x2-undecaprenyl-diphosphate
type: Species

183401
notes: GENE_ASSOCIATION: ( b4129 or b2890 ) SUBSYSTEM: tRNA Charging
reactant: 257016
product: 257041
product: 257065
reversible: false
product: 257053
type: Reaction
reactant: 257029
kinetic law: 257077
fast: false
reactant: 257004
name: Lysyl tRNA synthetase

183713
kinetic law: 264737
product: 264724
reactant: 264712
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: molybdate transport via diffusion extracellular to periplasm
type: Reaction

262576
stoichiometry: 1.0
species: 179020
type: SpeciesReference

257161
stoichiometry: 1.0
species: 179463
type: SpeciesReference

244702
stoichiometry: 1.0
species: 178020
type: SpeciesReference

192185
value: 1000.0
type: LocalParameter

177191
notes: FORMULA: C35H64O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: 1-2-Diacyl-sn-glycerol-dihexadec-9-enoyl-n-C161
type: Species

254953
stoichiometry: 1.0
species: 178737
type: SpeciesReference

178485
notes: FORMULA: C4H7O7P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Erythrose-4-phosphate
type: Species

199761
stoichiometry: 1.0
species: 178744
type: SpeciesReference

188128
stoichiometry: 1.0
species: 178251
type: SpeciesReference

193890
value: 0.0
type: LocalParameter

194820
value: 1000.0
type: LocalParameter

184160
type: Reaction
reactant: 282412
name: phosphate transport via ABC system uptake periplasm
reactant: 282436
reactant: 282424
product: 282460
notes: GENE_ASSOCIATION: ( b3726 and b3725 and b3727 and b3728 ) SUBSYSTEM: Inorganic Ion Transport and Metabolism
product: 282472
kinetic law: 282484
reversible: false
product: 282448
fast: false

304308
stoichiometry: 1.0
species: 178016
type: SpeciesReference

246341
stoichiometry: 1.0
species: 178743
type: SpeciesReference

183404
product: 257149
kinetic law: 257173
reactant: 257089
reversible: false
reactant: 257101
product: 257161
reactant: 257113
product: 257125
type: Reaction
name: L lysine transport via ABC system periplasm
fast: false
notes: GENE_ASSOCIATION: ( b2310 and b2307 and b2306 and b2308 ) SUBSYSTEM: Transport Inner Membrane
product: 257137

220788
stoichiometry: 0.02632
species: 179363
type: SpeciesReference

177193
notes: FORMULA: C39H76O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 1-2-Diacyl-sn-glycerol-dioctadecanoyl-n-C180
type: Species

157075
stoichiometry: 1.0
species: 177398
type: SpeciesReference

199335
value: 0.0
type: LocalParameter

288807
stoichiometry: 1.0
species: 179561
type: SpeciesReference

222099
stoichiometry: 1.0
species: 179471
type: SpeciesReference

193299
value: 0.0
type: LocalParameter

244040
stoichiometry: 1.0
species: 178278
type: SpeciesReference

191903
value: 0.0
type: LocalParameter

259606
stoichiometry: 1.0
species: 179022
type: SpeciesReference

193892
value: -1000.0
type: LocalParameter

192180
value: 1000.0
type: LocalParameter

183405
stoichiometry: 1.0
species: 178737
type: SpeciesReference

169172
stoichiometry: 1.0
species: 177957
type: SpeciesReference

248697
stoichiometry: 1.0
species: 180185
type: SpeciesReference

253238
stoichiometry: 1.0
species: 178752
type: SpeciesReference

294426
stoichiometry: 1.0
species: 179169
type: SpeciesReference

249119
stoichiometry: 1.0
species: 178812
type: SpeciesReference

199332
value: 0.0
type: LocalParameter

177194
stoichiometry: 1.0
species: 178016
type: SpeciesReference

199559
value: 1000.0
type: LocalParameter

232057
stoichiometry: 1.0
species: 178597
type: SpeciesReference

191906
value: 0.0
type: LocalParameter

243534
stoichiometry: 1.0
species: 179167
type: SpeciesReference

193891
value: 0.0
type: LocalParameter

218493
stoichiometry: 1.0
species: 179219
type: SpeciesReference

188129
value: 1000.0
type: LocalParameter

156135
stoichiometry: 1.0
species: 178173
type: SpeciesReference

177195
notes: FORMULA: C39H76O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: 1-2-Diacyl-sn-glycerol-dioctadecanoyl-n-C180
type: Species

182787
notes: GENE_ASSOCIATION: b3632 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
name: heptosyltransferase III LPS core synthesis
product: 244751
kinetic law: 244763
product: 244738
fast: false
product: 244726
reactant: 244714
reversible: false
type: Reaction
reactant: 244702

223626
stoichiometry: 1.0
species: 178743
type: SpeciesReference

309226
stoichiometry: 1.0
species: 179597
type: SpeciesReference

184161
reversible: false
fast: false
name: Phospholipase A1 phosphatidate n C120 periplasm
product: 282532
reactant: 282496
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
product: 282520
type: Reaction
kinetic law: 282544
reactant: 282508

191905
value: 0.0
type: LocalParameter

199556
value: 0.0
type: LocalParameter

268609
stoichiometry: 1.0
species: 178737
type: SpeciesReference

239458
stoichiometry: 1.0
species: 178743
type: SpeciesReference

188124
value: 0.0
type: LocalParameter

183407
notes: GENE_ASSOCIATION: b2156 SUBSYSTEM: Transport Inner Membrane
fast: false
reactant: 257185
reactant: 257197
reversible: false
type: Reaction
kinetic law: 257233
product: 257209
product: 257221
name: L lysine transport in via proton symport periplasm

247018
stoichiometry: 1.0
species: 178786
type: SpeciesReference

264773
stoichiometry: 1.0
species: 179028
type: SpeciesReference

178047
notes: FORMULA: C3H7NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Alanine
type: Species

193296
value: 0.0
type: LocalParameter

191900
value: 0.0
type: LocalParameter

162345
stoichiometry: 1.0
species: 179233
type: SpeciesReference

187198
stoichiometry: 1.0
species: 178247
type: SpeciesReference

214561
stoichiometry: 1.0
species: 178241
type: SpeciesReference

305098
stoichiometry: 1.0
species: 178739
type: SpeciesReference

161762
stoichiometry: 1.0
species: 177902
type: SpeciesReference

274956
stoichiometry: 1.0
species: 179167
type: SpeciesReference

173704
stoichiometry: 1.0
species: 178932
type: SpeciesReference

168712
stoichiometry: 1.0
species: 178013
type: SpeciesReference

177198
notes: FORMULA: C39H72O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 1-2-Diacyl-sn-glycerol-dioctadec-11-enoyl-n-C181
type: Species

158007
stoichiometry: 1.0
species: 177433
type: SpeciesReference

178049
notes: FORMULA: C3H7NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Alanine
type: Species

188126
value: 0.0
type: LocalParameter

179867
notes: FORMULA: C12H21O14P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: alpha-alpha-Trehalose-6-phosphate
type: Species

191902
value: 1000.0
type: LocalParameter

199769
value: 1000.0
type: LocalParameter

272749
stoichiometry: 1.0
species: 179227
type: SpeciesReference

304520
stoichiometry: 1.0
species: 178561
type: SpeciesReference

199555
value: 0.0
type: LocalParameter

231839
stoichiometry: 1.0
species: 178625
type: SpeciesReference

189942
value: 0.0
type: LocalParameter

159936
stoichiometry: 1.0
species: 178743
type: SpeciesReference

188125
value: 0.0
type: LocalParameter

168929
stoichiometry: 1.0
species: 178016
type: SpeciesReference

191901
value: 0.0
type: LocalParameter

200390
value: 0.0
type: LocalParameter

200382
value: -1000.0
type: LocalParameter

194839
value: 0.0
type: LocalParameter

296654
stoichiometry: 1.0
species: 179715
type: SpeciesReference

191921
value: 0.0
type: LocalParameter

179289
notes: FORMULA: C5H3N2O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Orotate
type: Species

302874
stoichiometry: 1.0
species: 179948
type: SpeciesReference

178046
notes: FORMULA: C3H7NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: beta-Alanine
type: Species

198170
value: 1000.0
type: LocalParameter

251497
stoichiometry: 1.0
species: 179113
type: SpeciesReference

200381
value: 0.0
type: LocalParameter

191922
value: 1000.0
type: LocalParameter

194838
value: 0.0
type: LocalParameter

199329
value: 1000.0
type: LocalParameter

209467
stoichiometry: 1.0
species: 178485
type: SpeciesReference

196593
value: 0.0
type: LocalParameter

294631
stoichiometry: 1.0
species: 178673
type: SpeciesReference

265316
stoichiometry: 1.0
species: 179167
type: SpeciesReference

220341
stoichiometry: 50.988
species: 178173
type: SpeciesReference

199203
value: 0.0
type: LocalParameter

180480
kinetic law: 159816
product: 159804
product: 159792
reactant: 159780
notes: GENE_ASSOCIATION: ( b0954 or b0180 ) SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
reversible: false
name: 3 hydroxyacyl acyl carrier protein dehydratase n C80
type: Reaction

179851
notes: FORMULA: C3H9NO
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Trimethylamine-N-oxide
type: Species

200380
value: 0.0
type: LocalParameter

184179
reversible: false
product: 283304
reactant: 283292
product: 283316
type: Reaction
fast: false
name: Phospholipase A1 phosphatidylethanolamine n C180 periplasm
product: 283328
reactant: 283280
kinetic law: 283341
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism

199206
value: 0.0
type: LocalParameter

309430
stoichiometry: 4.0
species: 178745
type: SpeciesReference

253445
stoichiometry: 1.0
species: 178745
type: SpeciesReference

178044
notes: FORMULA: C3H7NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: beta-Alanine
type: Species

198172
value: 0.0
type: LocalParameter

196591
value: 0.0
type: LocalParameter

307158
stoichiometry: 1.0
species: 178745
type: SpeciesReference

240328
stoichiometry: 1.0
species: 177897
type: SpeciesReference

191920
value: 0.0
type: LocalParameter

178043
notes: FORMULA: C3H7NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: beta-Alanine
type: Species

179853
notes: FORMULA: C3H9NO
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Trimethylamine-N-oxide
type: Species

198173
value: 0.0
type: LocalParameter

273717
stoichiometry: 1.0
species: 178743
type: SpeciesReference

194835
value: 1000.0
type: LocalParameter

199209
value: 0.0
type: LocalParameter

270561
stoichiometry: 1.0
species: 178737
type: SpeciesReference

180486
reactant: 159936
name: 3 3 hydroxy phenyl propionate hydroxylase
notes: GENE_ASSOCIATION: b0347 SUBSYSTEM: Alternate Carbon Metabolism
reversible: false
reactant: 159924
kinetic law: 160008
type: Reaction
fast: false
product: 159996
product: 159972
product: 159984
reactant: 159960
reactant: 159948

289362
stoichiometry: 1.0
species: 178673
type: SpeciesReference

220956
stoichiometry: 0.1379
species: 179954
type: SpeciesReference

200386
value: 0.0
type: LocalParameter

198174
value: 0.0
type: LocalParameter

273220
stoichiometry: 1.0
species: 178215
type: SpeciesReference

261561
stoichiometry: 1.0
species: 179000
type: SpeciesReference

178699
notes: FORMULA: C2H3O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Glycolate
type: Species

308051
stoichiometry: 1.0
species: 180185
type: SpeciesReference

179285
notes: FORMULA: C5H13N2O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Ornithine
type: Species

199325
value: 0.0
type: LocalParameter

199208
value: 0.0
type: LocalParameter

184178
type: Reaction
reactant: 283208
reactant: 283220
reversible: false
product: 283244
product: 283232
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
product: 283256
fast: false
name: Phospholipase A1 phosphatidylethanolamine n C161 periplasm
kinetic law: 283268

194834
value: 0.0
type: LocalParameter

196597
value: 0.0
type: LocalParameter

302073
stoichiometry: 1.0
species: 179867
type: SpeciesReference

200385
value: 1000.0
type: LocalParameter

236340
stoichiometry: 1.0
species: 178668
type: SpeciesReference

198175
value: 1000.0
type: LocalParameter

199998
value: 0.0
type: LocalParameter

178041
notes: FORMULA: C5H4O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: 2-Oxoglutarate
type: Species

184175
fast: false
product: 283099
name: Phospholipase A1 phosphatidylethanolamine n C141 periplasm
reversible: false
type: Reaction
product: 283111
product: 283087
reactant: 283075
reactant: 283063
kinetic law: 283123
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism

283111
stoichiometry: 1.0
species: 179942
type: SpeciesReference

196594
value: 0.0
type: LocalParameter

194837
value: 0.0
type: LocalParameter

178697
notes: FORMULA: C3H8O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Glycerol
type: Species

199327
stoichiometry: 1.0
species: 178318
type: SpeciesReference

179287
notes: FORMULA: C10H10N2O11P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Orotidine-5-phosphate
type: Species

178040
notes: FORMULA: C5H4O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: 2-Oxoglutarate
type: Species

180483
notes: GENE_ASSOCIATION: b0347 SUBSYSTEM: Alternate Carbon Metabolism
name: 3 hydroxycinnamate hydroxylase
reactant: 159864
fast: false
product: 159900
product: 159876
reversible: false
reactant: 159828
product: 159888
type: Reaction
reactant: 159840
kinetic law: 159912
reactant: 159852

184176
type: Reaction
product: 283160
fast: false
reactant: 283148
kinetic law: 283196
product: 283184
reversible: false
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
reactant: 283135
product: 283172
name: Phospholipase A1 phosphatidylethanolamine n C160 periplasm

196595
value: 1000.0
type: LocalParameter

193459
value: 0.0
type: LocalParameter

276440
stoichiometry: 1.0
species: 179463
type: SpeciesReference

243762
stoichiometry: 1.0
species: 177812
type: SpeciesReference

234526
stoichiometry: 1.0
species: 178647
type: SpeciesReference

259330
stoichiometry: 1.0
species: 178964
type: SpeciesReference

178698
notes: FORMULA: C3H8O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Glycerol
type: Species

198177
value: 0.0
type: LocalParameter

199326
value: 0.0
type: LocalParameter

195611
value: 1000.0
type: LocalParameter

179281
notes: FORMULA: C5H13N2O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Ornithine
type: Species

195612
value: 0.0
type: LocalParameter

178481
notes: FORMULA: C9H12N2O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Deoxyuridine
type: Species

198178
value: 0.0
type: LocalParameter

178695
notes: FORMULA: C3H5O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: R-Glycerate
type: Species

182039
stoichiometry: 1.0
species: 177941
type: SpeciesReference

277473
stoichiometry: 1.0
species: 179169
type: SpeciesReference

199995
value: 1000.0
type: LocalParameter

217238
stoichiometry: 1.0
species: 178766
type: SpeciesReference

279095
stoichiometry: 1.0
species: 179393
type: SpeciesReference

175314
stoichiometry: 1.0
species: 178743
type: SpeciesReference

178482
notes: FORMULA: C9H11N2O14P3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: dUTP
type: Species

195613
value: 0.0
type: LocalParameter

228989
stoichiometry: 1.0
species: 178506
type: SpeciesReference

179282
stoichiometry: 1.0
species: 178170
type: SpeciesReference

198179
value: 0.0
type: LocalParameter

183729
type: Reaction
reactant: 265208
fast: false
reversible: true
name: methylenetetrahydrofolate dehydrogenase NADP
kinetic law: 265256
product: 265244
notes: GENE_ASSOCIATION: b0529 SUBSYSTEM: Folate Metabolism
reactant: 265220
product: 265232

239892
stoichiometry: 1.0
species: 178704
type: SpeciesReference

199994
value: 0.0
type: LocalParameter

178696
notes: FORMULA: C3H8O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Glycerol
type: Species

218903
stoichiometry: 1.0
species: 179515
type: SpeciesReference

192884
value: 1000.0
type: LocalParameter

210675
stoichiometry: 1.0
species: 179171
type: SpeciesReference

189391
value: 0.0
type: LocalParameter

294861
stoichiometry: 1.0
species: 179501
type: SpeciesReference

276668
stoichiometry: 1.0
species: 177193
type: SpeciesReference

167776
stoichiometry: 1.0
species: 179177
type: SpeciesReference

200389
value: 0.0
type: LocalParameter

180489
product: 160045
reversible: false
product: 160057
reactant: 160033
product: 160069
kinetic law: 160081
reactant: 160020
fast: false
name: 3 keto L gulonate kinase
type: Reaction
notes: GENE_ASSOCIATION: b3580 SUBSYSTEM: Alternate Carbon Metabolism

166250
stoichiometry: 1.0
species: 178182
type: SpeciesReference

193457
value: 1000.0
type: LocalParameter

188563
value: 1000.0
type: LocalParameter

195614
value: 0.0
type: LocalParameter

178693
notes: FORMULA: C3H5O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: R-Glycerate
type: Species

248179
stoichiometry: 1.0
species: 177460
type: SpeciesReference

225258
stoichiometry: 1.0
species: 178743
type: SpeciesReference

179283
notes: FORMULA: C5H13N2O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Ornithine
type: Species

181270
stoichiometry: 1.0
species: 178184
type: SpeciesReference

193454
value: 0.0
type: LocalParameter

254746
stoichiometry: 1.0
species: 178690
type: SpeciesReference

183727
kinetic law: 265196
reactant: 265160
reversible: true
fast: false
type: Reaction
name: methenyltetrahydrofolate cyclohydrolase
reactant: 265148
product: 265184
notes: GENE_ASSOCIATION: b0529 SUBSYSTEM: Folate Metabolism
product: 265172

178694
notes: FORMULA: C3H5O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: R-Glycerate
type: Species

188564
value: 0.0
type: LocalParameter

172788
stoichiometry: 1.0
species: 178745
type: SpeciesReference

178480
notes: FORMULA: C9H12N2O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Deoxyuridine
type: Species

192881
value: -1000.0
type: LocalParameter

173937
stoichiometry: 1.0
species: 178346
type: SpeciesReference

181271
notes: GENE_ASSOCIATION: b3196 SUBSYSTEM: Inorganic Ion Transport and Metabolism
reactant: 183177
reactant: 183189
name: calcium sodium antiporter 11
type: Reaction
product: 183201
product: 183213
fast: false
reversible: true
kinetic law: 183225

307001
stoichiometry: 1.0
species: 180125
type: SpeciesReference

193455
value: -1000.0
type: LocalParameter

196599
value: 0.0
type: LocalParameter

188561
value: 0.0
type: LocalParameter

228760
stoichiometry: 1.0
species: 178743
type: SpeciesReference

192880
value: 0.0
type: LocalParameter

195616
value: 1000.0
type: LocalParameter

178691
notes: FORMULA: C3H7O6P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Glycerol-3-phosphate
type: Species

163846
stoichiometry: 1.0
species: 179177
type: SpeciesReference

289592
stoichiometry: 1.0
species: 178274
type: SpeciesReference

248407
stoichiometry: 1.0
species: 178737
type: SpeciesReference

209879
stoichiometry: 1.0
species: 178221
type: SpeciesReference

213619
stoichiometry: 1.0
species: 177932
type: SpeciesReference

193452
value: 0.0
type: LocalParameter

199990
value: 0.0
type: LocalParameter

195617
value: 0.0
type: LocalParameter

178692
notes: FORMULA: C3H7O6P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Glycerol-3-phosphate
type: Species

188562
value: -1000.0
type: LocalParameter

194223
stoichiometry: 2.0
species: 178080
type: SpeciesReference

161324
stoichiometry: 1.0
species: 177807
type: SpeciesReference

181273
product: 183273
fast: false
reactant: 183261
notes: GENE_ASSOCIATION: b1270 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
reversible: true
kinetic law: 183297
product: 183285
type: Reaction
reactant: 183237
name: Cobinamide adenyltransferase
reactant: 183249

252876
stoichiometry: 1.0
species: 178880
type: SpeciesReference

166699
stoichiometry: 1.0
species: 178511
type: SpeciesReference

199993
value: 0.0
type: LocalParameter

195618
value: 0.0
type: LocalParameter

272048
stoichiometry: 1.0
species: 178723
type: SpeciesReference

203186
stoichiometry: 1.0
species: 177390
type: SpeciesReference

232492
stoichiometry: 1.0
species: 178616
type: SpeciesReference

189394
value: 0.0
type: LocalParameter

247454
stoichiometry: 1.0
species: 178789
type: SpeciesReference

163155
stoichiometry: 1.0
species: 179501
type: SpeciesReference

199992
stoichiometry: 1.0
species: 179703
type: SpeciesReference

195619
value: 0.0
type: LocalParameter

261296
stoichiometry: 1.0
species: 179463
type: SpeciesReference

211080
stoichiometry: 1.0
species: 178743
type: SpeciesReference

207265
stoichiometry: 1.0
species: 178080
type: SpeciesReference

193450
value: 1000.0
type: LocalParameter

178690
notes: FORMULA: C3H7O6P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Glycerol-3-phosphate
type: Species

224884
stoichiometry: 1.0
species: 178743
type: SpeciesReference

256378
stoichiometry: 1.0
species: 178737
type: SpeciesReference

165452
stoichiometry: 1.0
species: 177965
type: SpeciesReference

189393
value: 0.0
type: LocalParameter

181275
kinetic law: 183369
reactant: 183309
fast: false
notes: GENE_ASSOCIATION: ( b3966 and ( b1252 and b3005 and b3006 ) ) SUBSYSTEM: Transport Outer Membrane
type: Reaction
reversible: false
reactant: 183321
product: 183333
name: Cobinamide transport via ton system extermal
product: 183345

181265
kinetic law: 182756
product: 182744
reactant: 182732
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: calcium Ca2 transport via diffusion extracellular to periplasm
type: Reaction

243316
stoichiometry: 1.0
species: 179167
type: SpeciesReference

232275
stoichiometry: 1.0
species: 177882
type: SpeciesReference

263515
stoichiometry: 2.0
species: 178091
type: SpeciesReference

183721
reactant: 264954
reversible: false
reactant: 264978
notes: GENE_ASSOCIATION: ( b0936 and b0933 and b0934 ) SUBSYSTEM: Transport Inner Membrane
type: Reaction
fast: false
product: 264990
name: methanesulfonate transport via ABC system periplasm
product: 265026
reactant: 264966
product: 265014
product: 265002
kinetic law: 265038

178478
notes: FORMULA: C9H11N2O8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: dUMP
type: Species

214078
stoichiometry: 1.0
species: 178053
type: SpeciesReference

199776
value: -1000.0
type: LocalParameter

188134
value: 1000.0
type: LocalParameter

221572
stoichiometry: 1.0
species: 178737
type: SpeciesReference

193888
value: 1000.0
type: LocalParameter

249815
stoichiometry: 1.0
species: 178173
type: SpeciesReference

256595
stoichiometry: 1.0
species: 178737
type: SpeciesReference

189959
value: 0.0
type: LocalParameter

166033
stoichiometry: 1.0
species: 177974
type: SpeciesReference

264336
stoichiometry: 1.0
species: 179085
type: SpeciesReference

296096
stoichiometry: 1.0
species: 179691
type: SpeciesReference

183720
stoichiometry: 1.0
species: 178173
type: SpeciesReference

178477
notes: FORMULA: C9H11N2O8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: dUMP
type: Species

188133
value: 0.0
type: LocalParameter

157508
stoichiometry: 1.0
species: 179355
type: SpeciesReference

199779
value: 1000.0
type: LocalParameter

189385
value: 0.0
type: LocalParameter

260316
stoichiometry: 1.0
species: 178739
type: SpeciesReference

193887
value: 0.0
type: LocalParameter

265713
stoichiometry: 1.0
species: 179161
type: SpeciesReference

189956
value: 1000.0
type: LocalParameter

192198
value: 0.0
type: LocalParameter

188132
value: 0.0
type: LocalParameter

203331
stoichiometry: 1.0
species: 178743
type: SpeciesReference

178476
notes: FORMULA: C9H11N2O8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: dUMP
type: Species

303222
stoichiometry: 1.0
species: 177613
type: SpeciesReference

193886
value: 0.0
type: LocalParameter

189386
value: 0.0
type: LocalParameter

194235
stoichiometry: 1.0
species: 178300
type: SpeciesReference

192199
value: 0.0
type: LocalParameter

172569
stoichiometry: 1.0
species: 178743
type: SpeciesReference

178475
notes: FORMULA: C9H11N2O11P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: dUDP
type: Species

181267
product: 182816
type: Reaction
product: 182804
name: LysineCadaverine antiporter periplasm
reactant: 182792
fast: false
kinetic law: 182840
reactant: 182768
product: 182828
notes: GENE_ASSOCIATION: b4132 SUBSYSTEM: Transport Inner Membrane
reactant: 182780
reversible: false

213836
stoichiometry: 1.0
species: 177983
type: SpeciesReference

282183
stoichiometry: 1.0
species: 178743
type: SpeciesReference

193885
stoichiometry: 1.0
species: 178295
type: SpeciesReference

199772
value: 0.0
type: LocalParameter

183413
kinetic law: 257329
product: 257317
reactant: 257305
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: L lysine transport via diffusion extracellular to periplasm
type: Reaction

273571
stoichiometry: 1.0
species: 178080
type: SpeciesReference

183725
product: 265111
type: Reaction
notes: GENE_ASSOCIATION: b0159 SUBSYSTEM: Arginine and Proline Metabolism
reactant: 265087
product: 265124
kinetic law: 265136
name: methylthioadenosine nucleosidase
fast: false
reversible: false
reactant: 265099

188130
value: 0.0
type: LocalParameter

178474
notes: FORMULA: C10H13N2O14P3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: dTTP
type: Species

295403
stoichiometry: 1.0
species: 178556
type: SpeciesReference

285883
stoichiometry: 1.0
species: 178743
type: SpeciesReference

240109
stoichiometry: 1.0
species: 180185
type: SpeciesReference

161543
stoichiometry: 1.0
species: 178221
type: SpeciesReference

262588
stoichiometry: 1.0
species: 178810
type: SpeciesReference

193884
value: 0.0
type: LocalParameter

232796
stoichiometry: 1.0
species: 178605
type: SpeciesReference

304882
stoichiometry: 1.0
species: 180030
type: SpeciesReference

181269
kinetic law: 183165
product: 182876
product: 182864
reactant: 182852
notes: GENE_ASSOCIATION: ( b1732 or b3942 ) SUBSYSTEM: Unassigned
fast: false
reversible: false
name: catalase
type: Reaction

298102
stoichiometry: 1.0
species: 179773
type: SpeciesReference

192197
value: 0.0
type: LocalParameter

202401
stoichiometry: 1.0
species: 178173
type: SpeciesReference

188569
value: 1000.0
type: LocalParameter

178473
notes: FORMULA: C10H13N2O8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: dTMP
type: Species

254965
stoichiometry: 1.0
species: 178690
type: SpeciesReference

233438
stoichiometry: 2.0
species: 179463
type: SpeciesReference

189389
value: 1000.0
type: LocalParameter

183410
product: 257269
name: L lysine transport out via proton antiport cytoplasm to periplasm
reversible: false
product: 257281
fast: false
notes: GENE_ASSOCIATION: b2923 SUBSYSTEM: Transport Inner Membrane
kinetic law: 257293
type: Reaction
reactant: 257257
reactant: 257245

307845
stoichiometry: 1.0
species: 178745
type: SpeciesReference

193883
value: 1000.0
type: LocalParameter

293060
stoichiometry: 1.0
species: 178016
type: SpeciesReference

183723
kinetic law: 265074
product: 265062
reactant: 265050
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: methanesulfonate transport via diffusion extracellular to periplasm
type: Reaction

156580
stoichiometry: 1.0
species: 178739
type: SpeciesReference

199774
stoichiometry: 1.0
species: 178319
type: SpeciesReference

192194
value: 0.0
type: LocalParameter

178472
notes: FORMULA: C10H13N2O8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: dTMP
type: Species

188568
value: 0.0
type: LocalParameter

234986
stoichiometry: 1.0
species: 178656
type: SpeciesReference

202618
stoichiometry: 1.0
species: 178173
type: SpeciesReference

182772
reactant: 244364
reactant: 244340
type: Reaction
reactant: 244352
product: 244376
name: Heme O synthase
kinetic law: 244400
product: 244388
fast: false
reversible: false
notes: GENE_ASSOCIATION: b0428 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis

192887
value: 0.0
type: LocalParameter

199775
value: 0.0
type: LocalParameter

239675
stoichiometry: 1.0
species: 179155
type: SpeciesReference

193881
value: 0.0
type: LocalParameter

178471
notes: FORMULA: C10H13N2O8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: dTMP
type: Species

192195
value: 1000.0
type: LocalParameter

188567
value: 0.0
type: LocalParameter

169184
stoichiometry: 1.0
species: 178737
type: SpeciesReference

253226
stoichiometry: 1.0
species: 178745
type: SpeciesReference

294414
stoichiometry: 1.0
species: 178743
type: SpeciesReference

192192
value: 0.0
type: LocalParameter

249107
stoichiometry: 1.0
species: 178811
type: SpeciesReference

199546
value: 0.0
type: LocalParameter

193880
value: 0.0
type: LocalParameter

243546
stoichiometry: 1.0
species: 177804
type: SpeciesReference

191918
value: 0.0
type: LocalParameter

194830
value: 1000.0
type: LocalParameter

240580
stoichiometry: 1.0
species: 178584
type: SpeciesReference

182775
product: 244461
kinetic law: 244473
name: LPS heptose kinase I LPS core synthesis
product: 244448
notes: GENE_ASSOCIATION: b3630 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
fast: false
reactant: 244424
product: 244436
reversible: false
type: Reaction
reactant: 244412

192193
value: 0.0
type: LocalParameter

156123
stoichiometry: 1.0
species: 177231
type: SpeciesReference

183418
stoichiometry: 1.0
species: 178016
type: SpeciesReference

291572
stoichiometry: 1.0
species: 178745
type: SpeciesReference

191917
value: 1000.0
type: LocalParameter

184399
type: Reaction
reactant: 289945
name: Phosphatidylserine syntase n C180
product: 289981
product: 289957
kinetic law: 289993
fast: false
product: 289969
notes: GENE_ASSOCIATION: b2585 SUBSYSTEM: Glycerophospholipid Metabolism
reversible: false
reactant: 289933

184173
fast: false
reactant: 283002
name: Phospholipase A1 phosphatidylethanolamine n C140 periplasm
type: Reaction
product: 283014
product: 283039
kinetic law: 283051
reactant: 282990
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
product: 283027
reversible: false

309214
stoichiometry: 0.5
species: 179229
type: SpeciesReference

210228
stoichiometry: 1.0
species: 179763
type: SpeciesReference

199322
value: 0.0
type: LocalParameter

223638
stoichiometry: 1.0
species: 179169
type: SpeciesReference

246354
stoichiometry: 1.0
species: 178771
type: SpeciesReference

220775
stoichiometry: 0.04148
species: 179361
type: SpeciesReference

217526
stoichiometry: 1.0
species: 178826
type: SpeciesReference

192190
value: 1000.0
type: LocalParameter

208206
stoichiometry: 1.0
species: 177935
type: SpeciesReference

191916
value: 0.0
type: LocalParameter

184172
name: Phospholipase A1 phosphatidylethanolamine n C120 periplasm
type: Reaction
reactant: 282918
kinetic law: 282978
product: 282966
reversible: false
product: 282942
fast: false
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
reactant: 282930
product: 282954

199549
value: 1000.0
type: LocalParameter

184398
reversible: false
reactant: 289871
product: 289883
kinetic law: 289921
name: Phosphatidylserine syntase n C161
product: 289908
product: 289896
reactant: 289859
notes: GENE_ASSOCIATION: b2585 SUBSYSTEM: Glycerophospholipid Metabolism
fast: false
type: Reaction

277039
stoichiometry: 1.0
species: 178713
type: SpeciesReference

194832
value: 0.0
type: LocalParameter

259619
stoichiometry: 1.0
species: 179589
type: SpeciesReference

183416
kinetic law: 257365
product: 257353
reactant: 257341
notes: GENE_ASSOCIATION: b3903 SUBSYSTEM: Alternate Carbon Metabolism
fast: false
reversible: false
name: Lyxose isomerase
type: Reaction

188139
value: 0.0
type: LocalParameter

191915
value: 0.0
type: LocalParameter

236129
stoichiometry: 1.0
species: 178578
type: SpeciesReference

293289
stoichiometry: 1.0
species: 178713
type: SpeciesReference

194833
value: 0.0
type: LocalParameter

205949
stoichiometry: 1.0
species: 177894
type: SpeciesReference

273001
stoichiometry: 1.0
species: 179239
type: SpeciesReference

178037
notes: FORMULA: C8H12N3O7P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 5-amino-1-5-phospho-D-ribosyl-imidazole
type: Species

188138
value: 0.0
type: LocalParameter

179855
notes: FORMULA: C25H45N2O8PRS
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: trans-Tetradec-2-enoyl-acyl-carrier-protein
type: Species

182778
fast: false
notes: GENE_ASSOCIATION: b3625 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
product: 244533
reactant: 244485
reversible: false
type: Reaction
reactant: 244497
name: LPS heptose kinase II LPS core synthesis
product: 244521
kinetic law: 244545
product: 244509

199542
value: 0.0
type: LocalParameter

189953
value: 0.0
type: LocalParameter

207782
stoichiometry: 1.0
species: 179295
type: SpeciesReference

162357
stoichiometry: 1.0
species: 177610
type: SpeciesReference

184396
product: 289822
product: 289834
notes: GENE_ASSOCIATION: b2585 SUBSYSTEM: Glycerophospholipid Metabolism
reactant: 289798
name: Phosphatidylserine syntase n C160
kinetic law: 289847
reversible: false
fast: false
reactant: 289786
product: 289810
type: Reaction

290730
stoichiometry: 1.0
species: 177505
type: SpeciesReference

212459
stoichiometry: 3.0
species: 177366
type: SpeciesReference

184170
name: Phospholipase A1 phosphatidate n C181 periplasm
type: Reaction
product: 282882
product: 282894
reactant: 282858
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
reactant: 282870
reversible: false
kinetic law: 282906
fast: false

188137
value: 0.0
type: LocalParameter

178038
notes: FORMULA: C5H4O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 2-Oxoglutarate
type: Species

159924
stoichiometry: 1.0
species: 177773
type: SpeciesReference

210108
stoichiometry: 1.0
species: 179171
type: SpeciesReference

199200
value: 0.0
type: LocalParameter

184395
reactant: 289713
type: Reaction
reversible: false
product: 289738
kinetic law: 289773
fast: false
product: 289749
reactant: 289725
product: 289762
notes: GENE_ASSOCIATION: b2585 SUBSYSTEM: Glycerophospholipid Metabolism
name: Phosphatidylserine syntase n C141

191913
value: 0.0
type: LocalParameter

289144
stoichiometry: 1.0
species: 179359
type: SpeciesReference

179857
notes: FORMULA: C19H33N2O8PRS
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: trans-Oct-2-enoyl-acyl-carrier-protein
type: Species

264785
stoichiometry: 1.0
species: 177496
type: SpeciesReference

178035
notes: FORMULA: C9H13N4O8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 5-Amino-1-5-Phospho-D-ribosyl-imidazole-4-carboxamide
type: Species

241960
stoichiometry: 1.0
species: 178722
type: SpeciesReference

199544
stoichiometry: 1.0
species: 178317
type: SpeciesReference

228156
stoichiometry: 1.0
species: 178556
type: SpeciesReference

278140
stoichiometry: 1.0
species: 179463
type: SpeciesReference

183419
fast: false
reactant: 257377
reactant: 257389
name: L Lyxose transport via proton symport periplasm
reversible: false
notes: GENE_ASSOCIATION: b3907 SUBSYSTEM: Transport Inner Membrane
product: 257413
product: 257401
kinetic law: 257425
type: Reaction

184394
type: Reaction
notes: GENE_ASSOCIATION: b2585 SUBSYSTEM: Glycerophospholipid Metabolism
product: 289689
kinetic law: 289701
reversible: false
name: Phosphatidylserine syntase n C140
product: 289677
fast: false
product: 289665
reactant: 289640
reactant: 289653

160599
stoichiometry: 1.0
species: 179171
type: SpeciesReference

191912
value: 1000.0
type: LocalParameter

160383
stoichiometry: 1.0
species: 179171
type: SpeciesReference

178479
notes: FORMULA: C9H12N2O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Deoxyuridine
type: Species

198180
value: 1000.0
type: LocalParameter

161750
stoichiometry: 1.0
species: 177800
type: SpeciesReference

199545
value: 0.0
type: LocalParameter

189952
value: 0.0
type: LocalParameter

242798
stoichiometry: 1.0
species: 178729
type: SpeciesReference

191911
value: 0.0
type: LocalParameter

274944
stoichiometry: 2.0
species: 178737
type: SpeciesReference

179859
notes: FORMULA: C29H53N2O8PRS
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: trans-octadec-2-enoyl-acyl-carrier-protein
type: Species

199315
value: 0.0
type: LocalParameter

179275
notes: FORMULA: C39H64N7O17P3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Octadecenoyl-CoA-n-C181CoA
type: Species

159502
stoichiometry: 1.0
species: 178737
type: SpeciesReference

195622
value: 0.0
type: LocalParameter

283148
stoichiometry: 1.0
species: 179361
type: SpeciesReference

180471
kinetic law: 159671
product: 159658
product: 159646
reactant: 159634
notes: GENE_ASSOCIATION: ( b0180 or b0954 ) SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
reversible: false
name: 3 hydroxyacyl acyl carrier protein dehydratase n C181
type: Reaction

208934
stoichiometry: 1.0
species: 179463
type: SpeciesReference

178685
notes: FORMULA: C5H11NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Glycine-betaine
type: Species

177169
constant: true
size: NaN
spatial dimensions: 3.0
name: Extracellular
type: Compartment

198140
value: 1000.0
type: LocalParameter

200372
value: 0.0
type: LocalParameter

193422
value: 0.0
type: LocalParameter

155811
stoichiometry: 1.0
species: 177181
type: SpeciesReference

175326
stoichiometry: 1.0
species: 179463
type: SpeciesReference

184187
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
kinetic law: 283703
reversible: false
reactant: 283643
fast: false
name: Phospholipase A1 phosphatidylglycerol n C160 periplasm
product: 283667
type: Reaction
product: 283679
reactant: 283655
product: 283691

265990
stoichiometry: 1.0
species: 178743
type: SpeciesReference

195623
value: 0.0
type: LocalParameter

199964
value: 0.0
type: LocalParameter

273257
stoichiometry: 1.0
species: 178743
type: SpeciesReference

177168
constant: true
size: NaN
spatial dimensions: 3.0
name: Cytoplasm
type: Compartment

259342
stoichiometry: 1.0
species: 179589
type: SpeciesReference

178686
notes: FORMULA: C5H11NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Glycine-betaine
type: Species

255704
stoichiometry: 1.0
species: 178115
type: SpeciesReference

234538
stoichiometry: 1.0
species: 178734
type: SpeciesReference

193423
value: -1000.0
type: LocalParameter

194800
value: 1000.0
type: LocalParameter

184188
product: 283763
reactant: 283715
name: Phospholipase A1 phosphatidylglycerol n C161 periplasm
fast: false
type: Reaction
reversible: false
kinetic law: 283775
product: 283751
reactant: 283727
product: 283739
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism

179273
notes: FORMULA: C39H64N7O17P3S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: trans-Octadec-2-enoyl-CoA
type: Species

277449
stoichiometry: 2.0
species: 178737
type: SpeciesReference

178687
notes: FORMULA: C5H11NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Glycine-betaine
type: Species

273729
stoichiometry: 1.0
species: 177860
type: SpeciesReference

220944
stoichiometry: 0.05684
species: 179918
type: SpeciesReference

289350
stoichiometry: 1.0
species: 177828
type: SpeciesReference

193424
value: 1000.0
type: LocalParameter

180474
kinetic law: 159720
product: 159707
product: 159695
reactant: 159683
notes: GENE_ASSOCIATION: ( b0954 or b0180 ) SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
reversible: false
name: 3 hydroxyacyl acyl carrier protein dehydratase n C40
type: Reaction

270573
stoichiometry: 1.0
species: 178714
type: SpeciesReference

195621
value: 1000.0
type: LocalParameter

199312
value: 0.0
type: LocalParameter

178688
notes: FORMULA: C3H7O6P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Glycerol-2-phosphate
type: Species

188590
value: 0.0
type: LocalParameter

236376
stoichiometry: 1.0
species: 178173
type: SpeciesReference

191930
value: 0.0
type: LocalParameter

192618
value: 0.0
type: LocalParameter

178689
notes: FORMULA: C3H7O6P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Glycerol-2-phosphate
type: Species

179279
notes: FORMULA: C5H5O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 2-Oxopent-4-enoate
type: Species

178032
notes: FORMULA: C14H20N6O5S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: S-Adenosyl-L-homocysteine
type: Species

294667
stoichiometry: 1.0
species: 179663
type: SpeciesReference

193426
value: 0.0
type: LocalParameter

191931
value: -1000.0
type: LocalParameter

194805
value: 1000.0
type: LocalParameter

179841
notes: FORMULA: C10H14N2O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Thymidine
type: Species

171879
stoichiometry: 1.0
species: 178052
type: SpeciesReference

183209
product: 253821
reversible: false
reactant: 253773
type: Reaction
product: 253797
fast: false
notes: GENE_ASSOCIATION: b0494 SUBSYSTEM: Glycerophospholipid Metabolism
name: Lysophospholipase L1 2 acylglycerophosphoethanolamine n C161 periplasm
reactant: 253785
kinetic law: 253833
product: 253809

188592
value: 0.0
type: LocalParameter

307881
stoichiometry: 1.0
species: 180173
type: SpeciesReference

186421
value: 1000.0
type: LocalParameter

178031
notes: FORMULA: C5H16N4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Agmatine
type: Species

191932
value: 1000.0
type: LocalParameter

199319
value: 1000.0
type: LocalParameter

234114
stoichiometry: 1.0
species: 178737
type: SpeciesReference

194804
value: -1000.0
type: LocalParameter

188593
value: -1000.0
type: LocalParameter

302886
stoichiometry: 1.0
species: 178016
type: SpeciesReference

178034
notes: FORMULA: C9H12N5O13P3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 2-Amino-4-hydroxy-6-erythro-1-2-3-trihydroxypropyl-dihydropteridine-triphosphate
type: Species

156543
stoichiometry: 1.0
species: 178745
type: SpeciesReference

179277
notes: FORMULA: C4H4O8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 2-Oxo-3-hydroxy-4-phosphobutanoate
type: Species

194803
value: 0.0
type: LocalParameter

193428
value: 0.0
type: LocalParameter

257149
stoichiometry: 1.0
species: 178892
type: SpeciesReference

273305
stoichiometry: 1.0
species: 179255
type: SpeciesReference

199968
value: 0.0
type: LocalParameter

236155
stoichiometry: 1.0
species: 178017
type: SpeciesReference

191933
value: 0.0
type: LocalParameter

188594
value: 1000.0
type: LocalParameter

178890
notes: FORMULA: XC16H30O1
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: lipoprotein
type: Species

265304
stoichiometry: 1.0
species: 177890
type: SpeciesReference

264906
stoichiometry: 1.0
species: 178743
type: SpeciesReference

199316
value: -1000.0
type: LocalParameter

194802
value: 0.0
type: LocalParameter

225487
stoichiometry: 1.0
species: 178511
type: SpeciesReference

199967
value: 0.0
type: LocalParameter

193012
value: 1000.0
type: LocalParameter

193429
value: 0.0
type: LocalParameter

194809
value: -1000.0
type: LocalParameter

244016
stoichiometry: 1.0
species: 177667
type: SpeciesReference

186425
value: 0.0
type: LocalParameter

188595
value: 0.0
type: LocalParameter

198148
value: 0.0
type: LocalParameter

246317
stoichiometry: 1.0
species: 178389
type: SpeciesReference

183206
notes: GENE_ASSOCIATION: b0494 SUBSYSTEM: Glycerophospholipid Metabolism
fast: false
product: 253749
kinetic law: 253761
reversible: false
product: 253736
type: Reaction
product: 253723
reactant: 253711
reactant: 253699
name: Lysophospholipase L1 2 acylglycerophosphoethanolamine n C160 periplasm

184815
stoichiometry: 1.0
species: 178745
type: SpeciesReference

256342
stoichiometry: 1.0
species: 179257
type: SpeciesReference

193879
value: 0.0
type: LocalParameter

194808
value: 0.0
type: LocalParameter

189381
value: 1000.0
type: LocalParameter

165488
stoichiometry: 1.0
species: 178016
type: SpeciesReference

186426
value: 0.0
type: LocalParameter

268199
stoichiometry: 1.0
species: 179189
type: SpeciesReference

304320
stoichiometry: 1.0
species: 178743
type: SpeciesReference

288601
stoichiometry: 1.0
species: 179159
type: SpeciesReference

188596
value: 0.0
type: LocalParameter

184816
reactant: 307400
reactant: 307388
fast: false
reversible: false
type: Reaction
product: 307449
product: 307436
reactant: 307412
name: Valyl tRNA synthetase
product: 307424
kinetic law: 307461
notes: GENE_ASSOCIATION: b4258 SUBSYSTEM: tRNA charging

198149
value: 0.0
type: LocalParameter

308472
stoichiometry: 1.0
species: 178743
type: SpeciesReference

178892
notes: FORMULA: C6H15N2O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Lysine
type: Species

163167
stoichiometry: 1.0
species: 179797
type: SpeciesReference

192611
value: 0.0
type: LocalParameter

194807
value: 0.0
type: LocalParameter

256559
stoichiometry: 1.0
species: 179938
type: SpeciesReference

294450
stoichiometry: 1.0
species: 179379
type: SpeciesReference

226657
stoichiometry: 1.0
species: 178173
type: SpeciesReference

184817
product: 307509
reactant: 307473
type: Reaction
product: 307545
notes: GENE_ASSOCIATION: ( b3454 and b3455 and b3457 and b3460 and b3456 ) SUBSYSTEM: Transport Inner Membrane
reactant: 307497
fast: false
reversible: false
product: 307533
reactant: 307485
name: L valine transport via ABC system periplasm
product: 307521
kinetic law: 307557

195628
value: 0.0
type: LocalParameter

188597
value: 0.0
type: LocalParameter

228796
stoichiometry: 1.0
species: 178558
type: SpeciesReference

247441
stoichiometry: 1.0
species: 178788
type: SpeciesReference

189383
value: 0.0
type: LocalParameter

161336
stoichiometry: 1.0
species: 177902
type: SpeciesReference

186423
value: 0.0
type: LocalParameter

178894
notes: FORMULA: C6H15N2O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: L-Lysine
type: Species

198147
value: 0.0
type: LocalParameter

188598
value: 1000.0
type: LocalParameter

216157
stoichiometry: 1.0
species: 178595
type: SpeciesReference

178680
notes: FORMULA: C2H5NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Glycine
type: Species

195629
value: 0.0
type: LocalParameter

254758
stoichiometry: 2.0
species: 178743
type: SpeciesReference

220317
stoichiometry: 0.2411
species: 178152
type: SpeciesReference

200376
value: 0.0
type: LocalParameter

183201
stoichiometry: 1.0
species: 178202
type: SpeciesReference

285425
stoichiometry: 1.0
species: 179261
type: SpeciesReference

199961
value: 1000.0
type: LocalParameter

278684
stoichiometry: 1.0
species: 178743
type: SpeciesReference

198144
value: 0.0
type: LocalParameter

178681
notes: FORMULA: C2H5NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Glycine
type: Species

195626
value: 1000.0
type: LocalParameter

184819
kinetic law: 307617
reactant: 307569
type: Reaction
name: L valine reversible transport via proton symport periplasm
product: 307605
product: 307593
notes: GENE_ASSOCIATION: b0401 SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: true
reactant: 307581

248143
stoichiometry: 1.0
species: 178737
type: SpeciesReference

188599
value: 0.0
type: LocalParameter

295826
stoichiometry: 1.0
species: 179173
type: SpeciesReference

179271
notes: FORMULA: C29H53N2O8PRS
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: cis-octadec-11-enoyl-acyl-carrier-protein-n-C181
type: Species

172751
stoichiometry: 1.0
species: 178743
type: SpeciesReference

183200
notes: GENE_ASSOCIATION: b0494 SUBSYSTEM: Glycerophospholipid Metabolism
reactant: 253553
name: Lysophospholipase L1 2 acylglycerophosphoethanolamine n C140 periplasm
product: 253577
reversible: false
reactant: 253565
product: 253589
type: Reaction
product: 253601
kinetic law: 253614
fast: false

200375
value: 0.0
type: LocalParameter

192612
value: 0.0
type: LocalParameter

278128
stoichiometry: 1.0
species: 179369
type: SpeciesReference

261090
stoichiometry: 1.0
species: 178978
type: SpeciesReference

178682
notes: FORMULA: C3H6O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Glyceraldehyde
type: Species

183739
kinetic law: 265556
product: 265544
reactant: 265532
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: nitrious oxide transport via diffusion extracellular to periplasm
type: Reaction

198145
value: 1000.0
type: LocalParameter

195627
value: 0.0
type: LocalParameter

178896
notes: FORMULA: C6H15N2O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: L-Lysine
type: Species

269295
stoichiometry: 1.0
species: 180185
type: SpeciesReference

295283
stoichiometry: 1.0
species: 179159
type: SpeciesReference

192615
value: 1000.0
type: LocalParameter

173500
stoichiometry: 1.0
species: 178737
type: SpeciesReference

303475
stoichiometry: 1.0
species: 178743
type: SpeciesReference

198142
value: 0.0
type: LocalParameter

195624
value: 0.0
type: LocalParameter

239253
stoichiometry: 1.0
species: 178696
type: SpeciesReference

178683
notes: FORMULA: C3H6O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: D-Glyceraldehyde
type: Species

200377
value: 1000.0
type: LocalParameter

180477
kinetic law: 159768
product: 159756
product: 159744
reactant: 159732
notes: GENE_ASSOCIATION: ( b0954 or b0180 ) SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
reversible: false
name: 3 hydroxyacyl acyl carrier protein dehydratase n C60
type: Reaction

186428
value: 1000.0
type: LocalParameter

166286
stoichiometry: 1.0
species: 178511
type: SpeciesReference

276656
stoichiometry: 1.0
species: 179319
type: SpeciesReference

294873
stoichiometry: 1.0
species: 179677
type: SpeciesReference

183203
reversible: false
notes: GENE_ASSOCIATION: b0494 SUBSYSTEM: Glycerophospholipid Metabolism
product: 253650
reactant: 253638
kinetic law: 253686
fast: false
product: 253674
name: Lysophospholipase L1 2 acylglycerophosphoethanolamine n C141 periplasm
type: Reaction
reactant: 253626
product: 253662

178684
notes: FORMULA: C3H6O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: D-Glyceraldehyde
type: Species

274980
stoichiometry: 1.0
species: 178743
type: SpeciesReference

193420
value: 0.0
type: LocalParameter

179270
stoichiometry: 1.0
species: 178085
type: SpeciesReference

178898
notes: FORMULA: C6H14N2OR
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Lysine-tRNA-Lys
type: Species

178470
notes: FORMULA: C16H24N2O15P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: dTDP-L-rhamnose
type: Species

252451
stoichiometry: 1.0
species: 178866
type: SpeciesReference

198143
value: 0.0
type: LocalParameter

178460
notes: FORMULA: X
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: periplasmic-disulfide-isomerasethiol-disulphide-oxidase-oxidized
type: Species

234950
stoichiometry: 1.0
species: 178745
type: SpeciesReference

188140
stoichiometry: 1.0
species: 179735
type: SpeciesReference

183735
notes: GENE_ASSOCIATION: SUBSYSTEM: Arginine and Proline Metabolism
kinetic law: 265436
name: 5 methylthioribose kinase
product: 265412
type: Reaction
reversible: false
product: 265424
reactant: 265376
reactant: 265388
fast: false
product: 265400

193870
value: 0.0
type: LocalParameter

168941
stoichiometry: 1.0
species: 178743
type: SpeciesReference

186208
value: 0.0
type: LocalParameter

205507
stoichiometry: 1.0
species: 178772
type: SpeciesReference

233402
stoichiometry: 1.0
species: 178608
type: SpeciesReference

283571
stoichiometry: 1.0
species: 178739
type: SpeciesReference

309418
stoichiometry: 1.0
species: 179595
type: SpeciesReference

189378
value: 0.0
type: LocalParameter

285871
stoichiometry: 1.0
species: 179501
type: SpeciesReference

188142
value: 1000.0
type: LocalParameter

178462
notes: FORMULA: C42H41N4O16
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: dihydrosirohydrochlorin
type: Species

172532
stoichiometry: 1.0
species: 178173
type: SpeciesReference

183425
type: Reaction
notes: GENE_ASSOCIATION: b3605 SUBSYSTEM: Oxidative Phosphorylation
reactant: 257473
name: L Lactate dehydrogenase ubiquinone
fast: false
product: 257497
kinetic law: 257521
product: 257509
reversible: false
reactant: 257485

209601
stoichiometry: 1.0
species: 179167
type: SpeciesReference

184810
kinetic law: 307208
reactant: 307158
fast: false
type: Reaction
notes: GENE_ASSOCIATION: b2406 SUBSYSTEM: Transport Inner Membrane
product: 307195
reactant: 307170
reversible: true
product: 307183
name: uridine transport in via proton symport reversible periplasm

183737
type: Reaction
product: 265508
reactant: 265448
product: 265496
kinetic law: 265520
reactant: 265460
reactant: 265472
product: 265484
notes: GENE_ASSOCIATION: b1059 SUBSYSTEM: Glycine and Serine Metabolism
reversible: false
name: N methyltryptophan oxidase
fast: false

282195
stoichiometry: 1.0
species: 179439
type: SpeciesReference

193873
value: 0.0
type: LocalParameter

171164
stoichiometry: 1.0
species: 178737
type: SpeciesReference

211054
stoichiometry: 1.0
species: 179167
type: SpeciesReference

199539
value: 1000.0
type: LocalParameter

254977
stoichiometry: 2.0
species: 178743
type: SpeciesReference

200599
value: 0.0
type: LocalParameter

186206
value: 0.0
type: LocalParameter

169377
stoichiometry: 1.0
species: 177959
type: SpeciesReference

173924
stoichiometry: 1.0
species: 178083
type: SpeciesReference

186204
value: 1000.0
type: LocalParameter

178461
notes: FORMULA: XH2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: periplasmic-disulfide-isomerasethiol-disulphide-oxidase-reduced
type: Species

216851
stoichiometry: 1.0
species: 178708
type: SpeciesReference

304870
stoichiometry: 1.0
species: 180028
type: SpeciesReference

281520
stoichiometry: 1.0
species: 178233
type: SpeciesReference

193872
value: 1000.0
type: LocalParameter

186419
value: -1000.0
type: LocalParameter

161555
stoichiometry: 1.0
species: 178743
type: SpeciesReference

199742
value: 0.0
type: LocalParameter

303258
stoichiometry: 1.0
species: 178173
type: SpeciesReference

183731
product: 265304
type: Reaction
reactant: 265280
notes: GENE_ASSOCIATION: b3941 SUBSYSTEM: Folate Metabolism
name: 5 10 methylenetetrahydrofolate reductase NADH
fast: false
reactant: 265268
reactant: 265292
reversible: false
kinetic law: 265328
product: 265316

178464
notes: FORMULA: C18H27N3O15P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: dTDP-4-acetamido-4-6-dideoxy-D-galactose
type: Species

163882
stoichiometry: 1.0
species: 180114
type: SpeciesReference

239470
stoichiometry: 1.0
species: 178840
type: SpeciesReference

193875
value: 0.0
type: LocalParameter

189373
value: 0.0
type: LocalParameter

260328
stoichiometry: 1.0
species: 179127
type: SpeciesReference

184811
kinetic law: 307244
product: 307232
reactant: 307220
notes: GENE_ASSOCIATION: b0411 SUBSYSTEM: Transport Outer Membrane
fast: false
reversible: true
name: uridine transport via diffusion extracellular to periplasm
type: Reaction

178463
notes: FORMULA: C10H17N2O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Dethiobiotin
type: Species

188143
value: 0.0
type: LocalParameter

189969
value: 0.0
type: LocalParameter

200594
stoichiometry: 1.0
species: 179177
type: SpeciesReference

183733
kinetic law: 265364
product: 265352
reactant: 265340
notes: GENE_ASSOCIATION: SUBSYSTEM: Arginine and Proline Metabolism
fast: false
reversible: true
name: 5 methylthioribose 1 phosphate isomerase
type: Reaction

178466
notes: FORMULA: C16H22N2O15P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: dTDP-4-dehydro-6-deoxy-D-glucose
type: Species

188146
value: 0.0
type: LocalParameter

184814
name: valine transaminase
reactant: 307328
notes: GENE_ASSOCIATION: b3770 SUBSYSTEM: Valine Leucine and Isoleucine Metabolism
type: Reaction
reversible: true
product: 307352
reactant: 307340
fast: false
product: 307364
kinetic law: 307376

243304
stoichiometry: 1.0
species: 177655
type: SpeciesReference

232263
stoichiometry: 1.0
species: 178609
type: SpeciesReference

193877
value: 1000.0
type: LocalParameter

235785
stoichiometry: 1.0
species: 178173
type: SpeciesReference

200595
value: 1000.0
type: LocalParameter

209007
stoichiometry: 1.0
species: 178479
type: SpeciesReference

183422
kinetic law: 257461
product: 257449
reactant: 257437
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: L Lyxose transport via diffusion extracellular to periplasm
type: Reaction

178465
notes: FORMULA: C16H26N3O14P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: dTDP-4-amino-4-6-dideoxy-D-galactose
type: Species

183732
stoichiometry: 1.0
species: 178211
type: SpeciesReference

184813
fast: false
product: 307304
type: Reaction
notes: GENE_ASSOCIATION: b0524 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
product: 307292
name: UDP sugar hydrolase
reversible: false
reactant: 307256
reactant: 307268
kinetic law: 307316
product: 307280

264324
stoichiometry: 1.0
species: 178743
type: SpeciesReference

186209
value: -1000.0
type: LocalParameter

200596
value: 0.0
type: LocalParameter

193876
value: -1000.0
type: LocalParameter

166069
stoichiometry: 1.0
species: 177975
type: SpeciesReference

193002
value: 1000.0
type: LocalParameter

167560
stoichiometry: 1.0
species: 178743
type: SpeciesReference

259895
stoichiometry: 1.0
species: 179141
type: SpeciesReference

251219
stoichiometry: 1.0
species: 178823
type: SpeciesReference

183002
reversible: true
type: Reaction
reactant: 249203
kinetic law: 249251
notes: GENE_ASSOCIATION: b2406 SUBSYSTEM: Transport Inner Membrane
reactant: 249215
name: inosine transport in via proton symport reversible periplasm
product: 249239
fast: false
product: 249227

228168
stoichiometry: 1.0
species: 178743
type: SpeciesReference

189963
value: 0.0
type: LocalParameter

288180
stoichiometry: 1.0
species: 177314
type: SpeciesReference

178023
notes: FORMULA: Ag
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: silver
type: Species

177172
notes: FORMULA: C20H21N7O7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 10-Formyltetrahydrofolate
type: Species

199532
value: 0.0
type: LocalParameter

178468
notes: FORMULA: C10H13N2O11P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: dTDP
type: Species

179845
notes: FORMULA: C3H10N
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: trimethylamine
type: Species

225283
stoichiometry: 1.0
species: 178526
type: SpeciesReference

241972
stoichiometry: 1.0
species: 178737
type: SpeciesReference

188148
value: 1000.0
type: LocalParameter

191923
value: 0.0
type: LocalParameter

179847
notes: FORMULA: C3H10N
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: trimethylamine
type: Species

200590
value: 0.0
type: LocalParameter

173728
stoichiometry: 1.0
species: 178924
type: SpeciesReference

168736
stoichiometry: 1.0
species: 178014
type: SpeciesReference

299794
stoichiometry: 1.0
species: 177457
type: SpeciesReference

177173
notes: FORMULA: C27H52O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 1-2-Diacyl-sn-glycerol-didodecanoyl-n-C120
type: Species

188147
value: 0.0
type: LocalParameter

271081
stoichiometry: 1.0
species: 179467
type: SpeciesReference

178467
notes: FORMULA: C16H22N2O15P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: dTDP-4-dehydro-6-deoxy-L-mannose
type: Species

182051
stoichiometry: 1.0
species: 178190
type: SpeciesReference

200591
value: 0.0
type: LocalParameter

211892
stoichiometry: 1.0
species: 177782
type: SpeciesReference

184182
name: Phospholipase A1 phosphatidylglycerol n C120 periplasm
reversible: false
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
kinetic law: 283486
product: 283474
reactant: 283437
product: 283461
fast: false
product: 283449
type: Reaction
reactant: 283425

191926
value: -1000.0
type: LocalParameter

290742
stoichiometry: 1.0
species: 177999
type: SpeciesReference

162369
stoichiometry: 1.0
species: 178736
type: SpeciesReference

156329
stoichiometry: 1.0
species: 177341
type: SpeciesReference

304544
stoichiometry: 8.0
species: 179501
type: SpeciesReference

253020
stoichiometry: 1.0
species: 178745
type: SpeciesReference

183005
kinetic law: 249287
product: 249275
reactant: 249263
notes: GENE_ASSOCIATION: b0411 SUBSYSTEM: Transport Outer Membrane
fast: false
reversible: true
name: inosine transport via diffusion extracellular to periplasm
type: Reaction

214586
stoichiometry: 1.0
species: 178245
type: SpeciesReference

178025
notes: FORMULA: Ag
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: silver
type: Species

179843
notes: FORMULA: C3H10N
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: trimethylamine
type: Species

273037
stoichiometry: 1.0
species: 179233
type: SpeciesReference

193005
value: 0.0
type: LocalParameter

289132
stoichiometry: 1.0
species: 178278
type: SpeciesReference

199746
value: 0.0
type: LocalParameter

191925
value: 0.0
type: LocalParameter

200592
value: -1000.0
type: LocalParameter

184181
reactant: 283353
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
product: 283401
product: 283377
product: 283389
reversible: false
kinetic law: 283413
reactant: 283365
type: Reaction
name: Phospholipase A1 phosphatidylethanolamine n C181 periplasm
fast: false

269476
stoichiometry: 1.0
species: 178806
type: SpeciesReference

177175
notes: FORMULA: C27H52O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: 1-2-Diacyl-sn-glycerol-didodecanoyl-n-C120
type: Species

265701
stoichiometry: 1.0
species: 179165
type: SpeciesReference

189966
value: 1000.0
type: LocalParameter

231815
stoichiometry: 1.0
species: 179463
type: SpeciesReference

178026
notes: FORMULA: C68H95CoN21O21P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Adenosine-GDP-cobinamide
type: Species

178469
notes: FORMULA: C16H24N2O16P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: dTDPglucose
type: Species

179269
notes: FORMULA: C40H65O7P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: all-trans-Octaprenyl-diphosphate
type: Species

199745
value: 0.0
type: LocalParameter

263540
stoichiometry: 1.0
species: 179125
type: SpeciesReference

184184
reactant: 283510
fast: false
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
product: 283523
kinetic law: 283559
reactant: 283498
reversible: false
name: Phospholipase A1 phosphatidylglycerol n C140 periplasm
type: Reaction
product: 283547
product: 283535

262165
stoichiometry: 1.0
species: 178737
type: SpeciesReference

191928
value: 0.0
type: LocalParameter

220763
stoichiometry: 0.02233
species: 179359
type: SpeciesReference

199536
value: 0.0
type: LocalParameter

293277
stoichiometry: 1.0
species: 178636
type: SpeciesReference

191927
value: 1000.0
type: LocalParameter

212216
stoichiometry: 1.0
species: 177902
type: SpeciesReference

243738
stoichiometry: 1.0
species: 177737
type: SpeciesReference

183428
product: 257569
type: Reaction
fast: false
kinetic law: 257581
notes: GENE_ASSOCIATION: b3605 SUBSYSTEM: Oxidative Phosphorylation
reversible: false
name: L Lactate dehydrogenase menaquinone
reactant: 257533
reactant: 257545
product: 257557

178028
notes: FORMULA: C5H16N4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Agmatine
type: Species

208219
stoichiometry: 1.0
species: 178581
type: SpeciesReference

186202
value: -1000.0
type: LocalParameter

189960
stoichiometry: 1.0
species: 179407
type: SpeciesReference

157051
stoichiometry: 1.0
species: 177392
type: SpeciesReference

199749
value: 1000.0
type: LocalParameter

232033
stoichiometry: 1.0
species: 178599
type: SpeciesReference

193009
value: 0.0
type: LocalParameter

178029
notes: FORMULA: C5H16N4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Agmatine
type: Species

248673
stoichiometry: 1.0
species: 178743
type: SpeciesReference

186201
value: 0.0
type: LocalParameter

177170
stoichiometry: 1.0
species: 178173
type: SpeciesReference

184185
product: 283607
fast: false
type: Reaction
product: 283595
product: 283619
reactant: 283583
reversible: false
kinetic law: 283631
name: Phospholipase A1 phosphatidylglycerol n C141 periplasm
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
reactant: 283571

298839
stoichiometry: 1.0
species: 178470
type: SpeciesReference

246921
stoichiometry: 1.0
species: 178737
type: SpeciesReference

277002
stoichiometry: 1.0
species: 179703
type: SpeciesReference

210216
stoichiometry: 1.0
species: 179173
type: SpeciesReference

309202
stoichiometry: 2.0
species: 178743
type: SpeciesReference

179849
notes: FORMULA: C3H9NO
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Trimethylamine-N-oxide
type: Species

193008
value: 0.0
type: LocalParameter

240592
stoichiometry: 1.0
species: 178739
type: SpeciesReference

291584
stoichiometry: 1.0
species: 179593
type: SpeciesReference

189962
value: 0.0
type: LocalParameter

204276
stoichiometry: 1.0
species: 178363
type: SpeciesReference

186200
stoichiometry: 1.0
species: 179315
type: SpeciesReference

224848
stoichiometry: 1.0
species: 178737
type: SpeciesReference

177171
constant: true
size: NaN
spatial dimensions: 3.0
name: Periplasm
type: Compartment

199535
value: 0.0
type: LocalParameter

178675
notes: FORMULA: C5H8NO4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: L-Glutamate
type: Species

198150
value: 1000.0
type: LocalParameter

195632
value: 0.0
type: LocalParameter

270586
stoichiometry: 1.0
species: 179463
type: SpeciesReference

179261
notes: FORMULA: C18H33O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: octadecenoate-n-C181
type: Species

193436
value: 1000.0
type: LocalParameter

191941
value: -1000.0
type: LocalParameter

195631
value: 1000.0
type: LocalParameter

220932
stoichiometry: 0.2537
species: 179819
type: SpeciesReference

261586
stoichiometry: 1.0
species: 177890
type: SpeciesReference

178676
notes: FORMULA: C8H13N2O5S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: gamma-L-Glutamyl-L-cysteine
type: Species

302097
stoichiometry: 1.0
species: 179872
type: SpeciesReference

199974
value: 0.0
type: LocalParameter

168508
stoichiometry: 1.0
species: 178016
type: SpeciesReference

195633
value: 0.0
type: LocalParameter

191942
value: 1000.0
type: LocalParameter

194810
value: 1000.0
type: LocalParameter

200361
value: 1000.0
type: LocalParameter

225052
stoichiometry: 1.0
species: 178520
type: SpeciesReference

198152
value: 0.0
type: LocalParameter

178673
notes: FORMULA: C5H8NO4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Glutamate
type: Species

260340
stoichiometry: 1.0
species: 179123
type: SpeciesReference

159514
stoichiometry: 1.0
species: 179861
type: SpeciesReference

179263
notes: FORMULA: C8H15O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: octanoate-n-C80
type: Species

199303
stoichiometry: 1.0
species: 178173
type: SpeciesReference

195634
value: 0.0
type: LocalParameter

283135
stoichiometry: 1.0
species: 178739
type: SpeciesReference

192605
value: 1000.0
type: LocalParameter

193434
value: 0.0
type: LocalParameter

184199
product: 284257
type: Reaction
fast: false
reversible: false
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
kinetic law: 284281
product: 284269
name: Phospholipase A2 phosphatidate n C161 periplasm
reactant: 284221
product: 284245
reactant: 284233

194813
value: 0.0
type: LocalParameter

199978
value: 0.0
type: LocalParameter

200360
value: -1000.0
type: LocalParameter

273245
stoichiometry: 1.0
species: 178256
type: SpeciesReference

178674
notes: FORMULA: C5H8NO4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: L-Glutamate
type: Species

198153
value: 0.0
type: LocalParameter

199302
value: 0.0
type: LocalParameter

208921
stoichiometry: 1.0
species: 178479
type: SpeciesReference

193435
value: -1000.0
type: LocalParameter

191940
value: 0.0
type: LocalParameter

194812
value: 0.0
type: LocalParameter

181291
name: cadmium Cd2 transport out via proton antiport periplasm
type: Reaction
reactant: 184803
product: 184839
kinetic law: 184851
fast: false
notes: GENE_ASSOCIATION: ( b0752 or b3915 ) SUBSYSTEM: Inorganic Ion Transport and Metabolism
product: 184827
reversible: false
reactant: 184815

199977
value: 0.0
type: LocalParameter

178022
notes: FORMULA: C15H21N5O14P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: ADPribose
type: Species

179265
notes: FORMULA: C8H15O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: octanoate-n-C80
type: Species

199305
value: 0.0
type: LocalParameter

302898
stoichiometry: 1.0
species: 178743
type: SpeciesReference

177179
notes: FORMULA: C31H60O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: 1-2-Diacyl-sn-glycerol-ditetradecanoyl-n-C140
type: Species

178679
notes: FORMULA: C2H5NO2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Glycine
type: Species

164811
stoichiometry: 1.0
species: 177941
type: SpeciesReference

194815
value: 1000.0
type: LocalParameter

161995
stoichiometry: 1.0
species: 178906
type: SpeciesReference

191945
value: 0.0
type: LocalParameter

199306
value: -1000.0
type: LocalParameter

296678
stoichiometry: 2.0
species: 178743
type: SpeciesReference

193025
value: 0.0
type: LocalParameter

188582
value: 0.0
type: LocalParameter

264918
stoichiometry: 1.0
species: 179135
type: SpeciesReference

199979
value: 1000.0
type: LocalParameter

211494
stoichiometry: 1.0
species: 178487
type: SpeciesReference

236142
stoichiometry: 1.0
species: 178743
type: SpeciesReference

191946
value: -1000.0
type: LocalParameter

194814
value: 0.0
type: LocalParameter

209443
stoichiometry: 1.0
species: 178844
type: SpeciesReference

178020
notes: FORMULA: C17H25N5O16P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: ADP-L-glycero-D-manno-heptose
type: Species

281316
stoichiometry: 1.0
species: 178739
type: SpeciesReference

205936
stoichiometry: 1.0
species: 178386
type: SpeciesReference

178677
notes: FORMULA: C5H7NO3R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Glutamyl-tRNA-Glu
type: Species

177177
notes: FORMULA: C31H60O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 1-2-Diacyl-sn-glycerol-ditetradecanoyl-n-C140
type: Species

179267
notes: FORMULA: C8H15O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: octanoate-n-C80
type: Species

194817
value: 0.0
type: LocalParameter

218205
stoichiometry: 1.0
species: 179093
type: SpeciesReference

171393
stoichiometry: 1.0
species: 178052
type: SpeciesReference

191943
value: 0.0
type: LocalParameter

193438
value: 0.0
type: LocalParameter

178678
notes: FORMULA: C2H1O3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Glyoxylate
type: Species

171867
stoichiometry: 1.0
species: 179159
type: SpeciesReference

226440
stoichiometry: 2.0
species: 178535
type: SpeciesReference

188580
value: 0.0
type: LocalParameter

193022
value: 1000.0
type: LocalParameter

234102
stoichiometry: 1.0
species: 178641
type: SpeciesReference

285858
stoichiometry: 1.0
species: 178737
type: SpeciesReference

192608
value: 0.0
type: LocalParameter

194819
value: 0.0
type: LocalParameter

193868
value: 0.0
type: LocalParameter

228784
stoichiometry: 1.0
species: 178557
type: SpeciesReference

226669
stoichiometry: 1.0
species: 178537
type: SpeciesReference

198158
value: 0.0
type: LocalParameter

188585
value: 0.0
type: LocalParameter

184805
type: Reaction
name: Uridine hydrolase
product: 307001
reactant: 306977
notes: GENE_ASSOCIATION: ( b2162 or b0651 or b0030 ) SUBSYSTEM: Alternate Carbon Metabolism
fast: false
reversible: false
reactant: 306965
product: 306989
kinetic law: 307014

204987
stoichiometry: 1.0
species: 178737
type: SpeciesReference

199309
value: 1000.0
type: LocalParameter

193869
value: 0.0
type: LocalParameter

200369
value: 1000.0
type: LocalParameter

161348
stoichiometry: 1.0
species: 178278
type: SpeciesReference

183440
product: 257787
reactant: 257763
fast: false
notes: GENE_ASSOCIATION: b2323 SUBSYSTEM: Membrane Lipid Metabolism
type: Reaction
reactant: 257775
kinetic law: 257811
reversible: false
product: 257799
name: Malonyl ACP decarboxylase

189371
value: 0.0
type: LocalParameter

181297
name: CDP Diacylglycerol pyrophostatase n C120
notes: GENE_ASSOCIATION: b3918 SUBSYSTEM: Glycerophospholipid Metabolism
product: 185163
type: Reaction
reactant: 185139
product: 185187
product: 185175
reactant: 185151
reversible: false
fast: false
kinetic law: 185199

194818
value: 0.0
type: LocalParameter

272021
stoichiometry: 1.0
species: 179507
type: SpeciesReference

242593
stoichiometry: 1.0
species: 178727
type: SpeciesReference

182508
reactant: 238951
product: 238963
type: Reaction
fast: false
name: glycolate transport via sodium symport periplasm
reversible: false
notes: GENE_ASSOCIATION: b4067 SUBSYSTEM: Transport Inner Membrane
reactant: 238939
product: 238976
kinetic law: 238988

198159
value: 0.0
type: LocalParameter

186411
value: 0.0
type: LocalParameter

244004
stoichiometry: 1.0
species: 177664
type: SpeciesReference

200368
value: 0.0
type: LocalParameter

180468
kinetic law: 159622
product: 159610
product: 159598
reactant: 159586
notes: GENE_ASSOCIATION: ( b0954 or b0180 ) SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
reversible: false
name: 3 hydroxyacyl acyl carrier protein dehydratase n C180
type: Reaction

193866
value: 1000.0
type: LocalParameter

183218
reactant: 254005
product: 254032
fast: false
reversible: false
notes: GENE_ASSOCIATION: b0494 SUBSYSTEM: Glycerophospholipid Metabolism
name: Lysophospholipase L1 2 acylglycerophosphoglycerol n C120 periplasm
product: 254045
type: Reaction
product: 254019
kinetic law: 254058
reactant: 253992

181299
reactant: 185247
product: 185452
product: 185392
name: CDP Diacylglycerol pyrophostatase n C140
type: Reaction
reversible: false
kinetic law: 185512
product: 185332
reactant: 185307
fast: false
notes: GENE_ASSOCIATION: b3918 SUBSYSTEM: Glycerophospholipid Metabolism

188583
value: 0.0
type: LocalParameter

184803
stoichiometry: 1.0
species: 178217
type: SpeciesReference

186412
value: 0.0
type: LocalParameter

246329
stoichiometry: 1.0
species: 179229
type: SpeciesReference

186414
value: 1000.0
type: LocalParameter

203161
stoichiometry: 1.0
species: 177386
type: SpeciesReference

200367
value: 0.0
type: LocalParameter

165476
stoichiometry: 1.0
species: 177944
type: SpeciesReference

224860
stoichiometry: 1.0
species: 178016
type: SpeciesReference

308484
stoichiometry: 1.0
species: 180224
type: SpeciesReference

184804
product: 306929
reactant: 306917
fast: false
reactant: 306905
product: 306941
notes: GENE_ASSOCIATION: b0171 SUBSYSTEM: Nucleotide Salvage Pathway
reversible: true
name: uridylate kinase dUMP
kinetic law: 306953
type: Reaction

207289
stoichiometry: 1.0
species: 178743
type: SpeciesReference

188584
value: 1000.0
type: LocalParameter

240121
stoichiometry: 1.0
species: 178085
type: SpeciesReference

289786
stoichiometry: 1.0
species: 178229
type: SpeciesReference

295295
stoichiometry: 1.0
species: 179675
type: SpeciesReference

304103
stoichiometry: 1.0
species: 179982
type: SpeciesReference

193432
value: 0.0
type: LocalParameter

239265
stoichiometry: 1.0
species: 178698
type: SpeciesReference

188589
value: 1000.0
type: LocalParameter

188161
value: -1000.0
type: LocalParameter

284485
stoichiometry: 1.0
species: 178745
type: SpeciesReference

198154
value: 0.0
type: LocalParameter

178671
notes: FORMULA: C5H9NO3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Glutamate-5-semialdehyde
type: Species

195636
value: 1000.0
type: LocalParameter

288614
stoichiometry: 1.0
species: 179535
type: SpeciesReference

199971
value: 1000.0
type: LocalParameter

182505
type: Reaction
kinetic law: 238927
product: 238915
fast: false
notes: GENE_ASSOCIATION: ( b3603 or b2975 ) SUBSYSTEM: Transport Inner Membrane
name: glycolate transport via proton symport reversible periplasm
reactant: 238891
reversible: true
product: 238903
reactant: 238879

303463
stoichiometry: 1.0
species: 177902
type: SpeciesReference

192602
value: 0.0
type: LocalParameter

276644
stoichiometry: 1.0
species: 178737
type: SpeciesReference

181293
kinetic law: 184947
product: 184887
reactant: 184863
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: cadmium Cd2 transport via diffusion extracellular to periplasm
type: Reaction

200365
stoichiometry: 1.0
species: 178743
type: SpeciesReference

186416
value: 0.0
type: LocalParameter

219700
stoichiometry: 1.0
species: 179928
type: SpeciesReference

180465
kinetic law: 159574
product: 159562
product: 159550
reactant: 159538
notes: GENE_ASSOCIATION: ( b0180 or b0954 ) SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
reversible: false
name: 3 hydroxyacyl acyl carrier protein dehydratase n C161
type: Reaction

166274
stoichiometry: 1.0
species: 178175
type: SpeciesReference

178672
notes: FORMULA: C5H8NO4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: D-Glutamate
type: Species

195637
value: 0.0
type: LocalParameter

188162
value: 1000.0
type: LocalParameter

198155
value: 1000.0
type: LocalParameter

183215
product: 253967
name: Lysophospholipase L1 2 acylglycerophosphoethanolamine n C181 periplasm
reactant: 253931
fast: false
reversible: false
product: 253955
type: Reaction
product: 253942
notes: GENE_ASSOCIATION: b0494 SUBSYSTEM: Glycerophospholipid Metabolism
kinetic law: 253979
reactant: 253918

181294
stoichiometry: 1.0
species: 179167
type: SpeciesReference

200364
value: 0.0
type: LocalParameter

210650
stoichiometry: 1.0
species: 179173
type: SpeciesReference

192601
value: 0.0
type: LocalParameter

258655
stoichiometry: 1.0
species: 178954
type: SpeciesReference

200578
value: -1000.0
type: LocalParameter

220329
stoichiometry: 0.2411
species: 178164
type: SpeciesReference

255909
stoichiometry: 1.0
species: 178743
type: SpeciesReference

195638
value: 0.0
type: LocalParameter

278696
stoichiometry: 1.0
species: 179769
type: SpeciesReference

184807
reactant: 307026
type: Reaction
reactant: 307038
kinetic law: 307086
fast: false
reversible: false
notes: GENE_ASSOCIATION: b2066 SUBSYSTEM: Nucleotide Salvage Pathway
name: uridine kinase GTPUridine
product: 307074
product: 307050
product: 307062

248155
stoichiometry: 1.0
species: 178803
type: SpeciesReference

188587
value: 0.0
type: LocalParameter

295814
stoichiometry: 1.0
species: 178743
type: SpeciesReference

183212
product: 253894
reversible: false
notes: GENE_ASSOCIATION: b0494 SUBSYSTEM: Glycerophospholipid Metabolism
reactant: 253845
type: Reaction
reactant: 253857
product: 253870
kinetic law: 253906
product: 253882
fast: false
name: Lysophospholipase L1 2 acylglycerophosphoethanolamine n C180 periplasm

181295
kinetic law: 185127
product: 185067
reactant: 185007
notes: GENE_ASSOCIATION: b3040 SUBSYSTEM: Inorganic Ion Transport and Metabolism
fast: false
reversible: false
name: cadmium 2 transport in via permease no H
type: Reaction

192600
stoichiometry: 1.0
species: 178289
type: SpeciesReference

200577
value: 0.0
type: LocalParameter

186418
value: 0.0
type: LocalParameter

228180
stoichiometry: 1.0
species: 178278
type: SpeciesReference

198157
value: 0.0
type: LocalParameter

184808
name: uridine transport in via proton symport periplasm
reactant: 307098
kinetic law: 307146
product: 307122
type: Reaction
notes: GENE_ASSOCIATION: ( b2964 or b2393 ) SUBSYSTEM: Transport Inner Membrane
product: 307134
fast: false
reversible: false
reactant: 307110

178670
notes: FORMULA: C5H8NO7P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Glutamate-5-phosphate
type: Species

195639
value: 0.0
type: LocalParameter

188160
value: 0.0
type: LocalParameter

180462
kinetic law: 159526
product: 159514
product: 159502
reactant: 159490
notes: GENE_ASSOCIATION: ( b0954 or b0180 ) SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
reversible: false
name: 3 hydroxyacyl acyl carrier protein dehydratase n C160
type: Reaction

188588
value: 0.0
type: LocalParameter

193430
value: 1000.0
type: LocalParameter

183213
stoichiometry: 1.0
species: 179155
type: SpeciesReference

278116
stoichiometry: 1.0
species: 178743
type: SpeciesReference

183437
name: mannitol 1 phosphate 5 dehydrogenase
reactant: 257701
reactant: 257689
fast: false
product: 257739
kinetic law: 257751
type: Reaction
product: 257713
reversible: true
product: 257726
notes: GENE_ASSOCIATION: b3600 SUBSYSTEM: Alternate Carbon Metabolism

173911
stoichiometry: 1.0
species: 178080
type: SpeciesReference

183749
reactant: 265737
notes: GENE_ASSOCIATION: ( b2411 or b3996 ) SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
product: 265785
product: 265761
product: 265773
reversible: false
type: Reaction
fast: false
kinetic law: 265798
reactant: 265749
name: NAD diphosphatase

295427
stoichiometry: 1.0
species: 178743
type: SpeciesReference

182793
product: 244885
fast: false
name: hydroxyethylthiazole kinase
type: Reaction
reactant: 244861
reactant: 244848
product: 244897
kinetic law: 244909
product: 244873
reversible: false
notes: GENE_ASSOCIATION: b2104 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis

171176
stoichiometry: 1.0
species: 178016
type: SpeciesReference

200587
value: 1000.0
type: LocalParameter

254989
stoichiometry: 1.0
species: 179257
type: SpeciesReference

213812
stoichiometry: 1.0
species: 177980
type: SpeciesReference

193861
value: 1000.0
type: LocalParameter

281532
stoichiometry: 1.0
species: 178690
type: SpeciesReference

169389
stoichiometry: 1.0
species: 178100
type: SpeciesReference

183224
kinetic law: 254204
name: Lysophospholipase L1 2 acylglycerophosphoglycerol n C141 periplasm
reactant: 254143
fast: false
notes: GENE_ASSOCIATION: b0494 SUBSYSTEM: Glycerophospholipid Metabolism
reactant: 254155
product: 254167
product: 254191
reversible: false
type: Reaction
product: 254179

188153
value: 0.0
type: LocalParameter

186407
value: 1000.0
type: LocalParameter

178019
notes: FORMULA: C17H25N5O16P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: ADP-D-glycero-D-manno-heptose
type: Species

183747
kinetic law: 265725
product: 265713
reactant: 265701
notes: GENE_ASSOCIATION: SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: false
name: Nicotinic acid uptake periplasm
type: Reaction

182502
fast: false
type: Reaction
notes: GENE_ASSOCIATION: ( b3553 or b1033 ) SUBSYSTEM: Glyoxylate Metabolism
product: 238843
reactant: 238831
reactant: 238819
product: 238855
kinetic law: 238867
name: Glycolate dehydrogenase NADP
reversible: false
reactant: 238807

234962
stoichiometry: 1.0
species: 179597
type: SpeciesReference

227815
stoichiometry: 1.0
species: 178173
type: SpeciesReference

288831
stoichiometry: 1.0
species: 179563
type: SpeciesReference

182796
reactant: 244921
type: Reaction
fast: false
notes: GENE_ASSOCIATION: b2388 SUBSYSTEM: GlycolysisGluconeogenesis
name: hexokinase D glucoseATP
product: 244969
kinetic law: 244981
product: 244957
reversible: false
product: 244945
reactant: 244933

188152
value: 0.0
type: LocalParameter

189365
value: 0.0
type: LocalParameter

211278
stoichiometry: 1.0
species: 179245
type: SpeciesReference

161568
stoichiometry: 1.0
species: 178906
type: SpeciesReference

307869
stoichiometry: 1.0
species: 178743
type: SpeciesReference

200585
value: 0.0
type: LocalParameter

199529
value: 1000.0
type: LocalParameter

168953
stoichiometry: 1.0
species: 179343
type: SpeciesReference

239699
stoichiometry: 1.0
species: 178680
type: SpeciesReference

273596
stoichiometry: 1.0
species: 178032
type: SpeciesReference

252088
stoichiometry: 1.0
species: 179595
type: SpeciesReference

240340
stoichiometry: 1.0
species: 178016
type: SpeciesReference

188151
value: 0.0
type: LocalParameter

186409
value: 0.0
type: LocalParameter

309406
stoichiometry: 1.0
species: 179169
type: SpeciesReference

189366
value: 0.0
type: LocalParameter

200586
value: 0.0
type: LocalParameter

308267
stoichiometry: 1.0
species: 178651
type: SpeciesReference

283583
stoichiometry: 1.0
species: 179391
type: SpeciesReference

183221
product: 254095
reversible: false
reactant: 254071
notes: GENE_ASSOCIATION: b0494 SUBSYSTEM: Glycerophospholipid Metabolism
fast: false
type: Reaction
name: Lysophospholipase L1 2 acylglycerophosphoglycerol n C140 periplasm
kinetic law: 254131
reactant: 254083
product: 254107
product: 254119

273741
stoichiometry: 1.0
species: 178278
type: SpeciesReference

264311
stoichiometry: 1.0
species: 179089
type: SpeciesReference

178454
notes: FORMULA: X
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: periplasmic-protein-disulfide-isomerase-I-oxidized
type: Species

199752
value: 0.0
type: LocalParameter

301117
stoichiometry: 1.0
species: 179853
type: SpeciesReference

184802
reversible: false
fast: false
product: 306869
product: 306857
notes: GENE_ASSOCIATION: SUBSYSTEM: Unassigned
product: 306881
reactant: 306821
reactant: 306845
reactant: 306833
type: Reaction
kinetic law: 306893
name: uricase

183745
kinetic law: 265689
product: 265677
reactant: 265665
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: Nicotinic acid transport via diffusion extracellular to periplasm
type: Reaction

184190
reversible: false
name: Phospholipase A1 phosphatidylglycerol n C180 periplasm
fast: false
product: 283823
kinetic law: 283847
reactant: 283787
product: 283811
reactant: 283799
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
product: 283835
type: Reaction

193865
value: 0.0
type: LocalParameter

189363
value: 0.0
type: LocalParameter

289567
stoichiometry: 1.0
species: 178226
type: SpeciesReference

182067
kinetic law: 219833
reactant: 219821
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: L Tyrosine exchange
type: Reaction

235797
stoichiometry: 1.0
species: 178653
type: SpeciesReference

209019
stoichiometry: 1.0
species: 178743
type: SpeciesReference

178453
notes: FORMULA: C21H33N7O13P2S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Dephospho-CoA
type: Species

181289
product: 184779
notes: GENE_ASSOCIATION: b3469 SUBSYSTEM: Inorganic Ion Transport and Metabolism
product: 184389
reversible: false
product: 184427
fast: false
name: Cadmium Cd2 ABC transporter periplasm
reactant: 184376
reactant: 184363
kinetic law: 184791
reactant: 184350
type: Reaction
product: 184415

183434
kinetic law: 257677
product: 257665
reactant: 257653
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: L lactate transport via diffusion extracellular to periplasm
type: Reaction

183744
stoichiometry: 1.0
species: 178743
type: SpeciesReference

188157
value: 0.0
type: LocalParameter

184801
kinetic law: 306809
product: 306797
reactant: 306785
notes: GENE_ASSOCIATION: b3927 SUBSYSTEM: Transport Inner Membrane
fast: false
reversible: true
name: Urea transport via facilitate diffusion periplasm
type: Reaction

204131
stoichiometry: 1.0
species: 178360
type: SpeciesReference

182066
kinetic law: 219809
reactant: 219796
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Tyramine exchange
type: Reaction

193864
value: 0.0
type: LocalParameter

268186
stoichiometry: 1.0
species: 178743
type: SpeciesReference

182790
kinetic law: 244836
fast: false
type: Reaction
product: 244824
reactant: 244775
notes: GENE_ASSOCIATION: b3623 SUBSYSTEM: Lipopolysaccharide Biosynthesis Recycling
reversible: false
name: heptosyltransferase IV LPS core synthesis
product: 244812
product: 244800
reactant: 244788

163870
stoichiometry: 1.0
species: 178464
type: SpeciesReference

188156
value: 1000.0
type: LocalParameter

183743
name: N acetylornithine deacetylase
reversible: false
reactant: 265604
kinetic law: 265652
notes: GENE_ASSOCIATION: b3957 SUBSYSTEM: Arginine and Proline Metabolism
product: 265628
fast: false
product: 265640
reactant: 265616
type: Reaction

200581
value: 1000.0
type: LocalParameter

189361
value: 1000.0
type: LocalParameter

234550
stoichiometry: 1.0
species: 179177
type: SpeciesReference

200359
value: 0.0
type: LocalParameter

194259
stoichiometry: 2.0
species: 178341
type: SpeciesReference

172545
stoichiometry: 1.0
species: 178016
type: SpeciesReference

178451
stoichiometry: 1.0
species: 178791
type: SpeciesReference

199755
value: 0.0
type: LocalParameter

182069
kinetic law: 219857
reactant: 219845
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Phosphotyrosine exchange
type: Reaction

299189
stoichiometry: 1.0
species: 179171
type: SpeciesReference

276428
stoichiometry: 1.0
species: 177185
type: SpeciesReference

193862
value: 0.0
type: LocalParameter

200582
value: 0.0
type: LocalParameter

183431
reversible: true
notes: GENE_ASSOCIATION: ( b3603 or b2975 ) SUBSYSTEM: Transport Inner Membrane
type: Reaction
product: 257629
name: L lactate reversible transport via proton symport periplasm
product: 257617
fast: false
reactant: 257605
reactant: 257593
kinetic law: 257641

286668
stoichiometry: 1.0
species: 179507
type: SpeciesReference

232468
stoichiometry: 1.0
species: 178743
type: SpeciesReference

182792
stoichiometry: 1.0
species: 178896
type: SpeciesReference

304532
stoichiometry: 8.0
species: 178816
type: SpeciesReference

272737
stoichiometry: 1.0
species: 179225
type: SpeciesReference

182063
kinetic law: 219760
reactant: 219748
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: tetradecenoate n C141 exchange
type: Reaction

212435
stoichiometry: 1.0
species: 179379
type: SpeciesReference

184194
reversible: false
reactant: 284003
product: 284051
name: Phospholipase A2 phosphatidate n C140 periplasm
product: 284027
fast: false
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
reactant: 284015
product: 284039
type: Reaction
kinetic law: 284063

191938
value: 0.0
type: LocalParameter

178013
notes: FORMULA: C72H100CoN18O17P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Adenosylcobalamin
type: Species

183741
kinetic law: 265592
product: 265580
reactant: 265568
notes: GENE_ASSOCIATION: s0001 SUBSYSTEM: Inorganic Ion Transport and Metabolism
fast: false
reversible: true
name: nitrious oxide transport diffusion
type: Reaction

179831
notes: FORMULA: C5H6N2O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Thymine
type: Species

273025
stoichiometry: 1.0
species: 179231
type: SpeciesReference

179258
stoichiometry: 1.0
species: 179882
type: SpeciesReference

199756
value: -1000.0
type: LocalParameter

178458
notes: FORMULA: X
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: fused-thioldisulfide-interchange-protein-oxidized
type: Species

158289
stoichiometry: 1.0
species: 179501
type: SpeciesReference

300405
stoichiometry: 1.0
species: 179831
type: SpeciesReference

269488
stoichiometry: 1.0
species: 178815
type: SpeciesReference

189979
value: 0.0
type: LocalParameter

289120
stoichiometry: 1.0
species: 179553
type: SpeciesReference

191937
value: 1000.0
type: LocalParameter

184193
fast: false
name: Phospholipase A2 phosphatidate n C120 periplasm
product: 283955
product: 283967
product: 283979
kinetic law: 283991
reactant: 283931
reactant: 283943
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
reversible: false
type: Reaction

178014
notes: FORMULA: C72H100CoN18O17P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Adenosylcobalamin
type: Species

179257
notes: FORMULA: C18H33O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: octadecenoate-n-C181
type: Species

178457
notes: FORMULA: XH2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: protein-disulfide-isomerase-II-reduced
type: Species

217262
stoichiometry: 1.0
species: 178778
type: SpeciesReference

177187
notes: FORMULA: C35H68O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: 1-2-Diacyl-sn-glycerol-dihexadecanoyl-n-C160
type: Species

231803
stoichiometry: 1.0
species: 179171
type: SpeciesReference

167572
stoichiometry: 1.0
species: 178813
type: SpeciesReference

251207
stoichiometry: 1.0
species: 178822
type: SpeciesReference

288192
stoichiometry: 1.0
species: 178511
type: SpeciesReference

159948
stoichiometry: 1.0
species: 179169
type: SpeciesReference

161774
stoichiometry: 1.0
species: 178278
type: SpeciesReference

199759
value: 1000.0
type: LocalParameter

191936
value: -1000.0
type: LocalParameter

291596
stoichiometry: 1.0
species: 178743
type: SpeciesReference

179833
notes: FORMULA: C5H6N2O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Thymine
type: Species

193015
value: 0.0
type: LocalParameter

241984
stoichiometry: 1.0
species: 178016
type: SpeciesReference

264761
stoichiometry: 1.0
species: 178737
type: SpeciesReference

178456
notes: FORMULA: X
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: protein-disulfide-isomerase-II-oxidized
type: Species

247006
stoichiometry: 1.0
species: 178785
type: SpeciesReference

178011
notes: FORMULA: C72H100CoN18O17P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Adenosylcobalamin
type: Species

307170
stoichiometry: 1.0
species: 180155
type: SpeciesReference

203319
stoichiometry: 1.0
species: 178314
type: SpeciesReference

199520
stoichiometry: 1.0
species: 178016
type: SpeciesReference

168724
stoichiometry: 1.0
species: 178745
type: SpeciesReference

184191
product: 283895
type: Reaction
fast: false
reactant: 283871
product: 283907
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
name: Phospholipase A1 phosphatidylglycerol n C181 periplasm
kinetic law: 283919
reversible: false
reactant: 283859
product: 283883

274968
stoichiometry: 1.0
species: 178673
type: SpeciesReference

182064
kinetic law: 219784
reactant: 219772
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: tungstate exchange
type: Reaction

191935
value: 0.0
type: LocalParameter

179259
notes: FORMULA: C18H33O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: octadecenoate-n-C181
type: Species

193014
stoichiometry: 2.0
species: 178294
type: SpeciesReference

178455
notes: FORMULA: XH2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: periplasmic-protein-disulfide-isomerase-I-reduced
type: Species

189976
value: 1000.0
type: LocalParameter

177185
notes: FORMULA: C35H68O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 1-2-Diacyl-sn-glycerol-dihexadecanoyl-n-C160
type: Species

179836
stoichiometry: 1.0
species: 178167
type: SpeciesReference

243522
stoichiometry: 1.0
species: 177679
type: SpeciesReference

232045
stoichiometry: 2.0
species: 179463
type: SpeciesReference

248685
stoichiometry: 1.0
species: 179169
type: SpeciesReference

189973
value: 0.0
type: LocalParameter

199522
value: 0.0
type: LocalParameter

177182
stoichiometry: 1.0
species: 178737
type: SpeciesReference

178017
notes: FORMULA: C16H23N5O15P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: ADPglucose
type: Species

179835
notes: FORMULA: C5H6N2O2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Thymine
type: Species

179837
notes: FORMULA: C10H14N2O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Thymidine
type: Species

184197
product: 284172
product: 284185
reactant: 284148
reactant: 284160
reversible: false
kinetic law: 284209
name: Phospholipase A2 phosphatidate n C160 periplasm
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
fast: false
product: 284197
type: Reaction

308039
stoichiometry: 1.0
species: 179501
type: SpeciesReference

225692
stoichiometry: 2.0
species: 178532
type: SpeciesReference

298827
stoichiometry: 1.0
species: 179173
type: SpeciesReference

277014
stoichiometry: 1.0
species: 179863
type: SpeciesReference

210204
stoichiometry: 1.0
species: 178743
type: SpeciesReference

223614
stoichiometry: 1.0
species: 178510
type: SpeciesReference

182799
product: 245018
reactant: 245006
type: Reaction
product: 245042
fast: false
reversible: false
kinetic law: 245054
name: hexokinase D mannoseATP
reactant: 244994
product: 245030
notes: GENE_ASSOCIATION: SUBSYSTEM: Alternate Carbon Metabolism

177183
notes: FORMULA: C31H56O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: 1-2-Diacyl-sn-glycerol-ditetradec-7-enoyl-n-C141
type: Species

204288
stoichiometry: 1.0
species: 178745
type: SpeciesReference

232771
stoichiometry: 1.0
species: 178743
type: SpeciesReference

182061
kinetic law: 219736
reactant: 219724
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: tetradecanoate n C140 exchange
type: Reaction

184196
product: 284100
name: Phospholipase A2 phosphatidate n C141 periplasm
notes: GENE_ASSOCIATION: b3821 SUBSYSTEM: Glycerophospholipid Metabolism
product: 284124
reversible: false
reactant: 284075
reactant: 284087
type: Reaction
kinetic law: 284136
product: 284112
fast: false

262153
stoichiometry: 1.0
species: 178173
type: SpeciesReference

189369
value: 1000.0
type: LocalParameter

217502
stoichiometry: 1.0
species: 178822
type: SpeciesReference

220751
stoichiometry: 0.011843
species: 179177
type: SpeciesReference

193019
value: -1000.0
type: LocalParameter

212228
stoichiometry: 1.0
species: 178872
type: SpeciesReference

179839
notes: FORMULA: C10H14N2O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Thymidine
type: Species

199526
value: 0.0
type: LocalParameter

199525
value: 0.0
type: LocalParameter

177181
notes: FORMULA: C31H56O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 1-2-Diacyl-sn-glycerol-ditetradec-7-enoyl-n-C141
type: Species

189972
value: 0.0
type: LocalParameter

284909
stoichiometry: 1.0
species: 178745
type: SpeciesReference

178459
notes: FORMULA: XH2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: fused-thioldisulfide-interchange-protein-reduced
type: Species

178016
notes: FORMULA: C10H12N5O10P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: ADP
type: Species

193018
value: 0.0
type: LocalParameter

198622
value: -1000.0
type: LocalParameter

188386
value: 0.0
type: LocalParameter

285401
stoichiometry: 1.0
species: 177281
type: SpeciesReference

199592
value: 0.0
type: LocalParameter

183973
stoichiometry: 1.0
species: 178665
type: SpeciesReference

180450
kinetic law: 159333
product: 159321
product: 159309
reactant: 159297
notes: GENE_ASSOCIATION: ( b0954 or b0180 ) SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
reversible: false
name: 3 hydroxyacyl acyl carrier protein dehydratase n C120
type: Reaction

178872
notes: FORMULA: C110H196N2O39P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: KDO-2-lipid-A
type: Species

181093
reactant: 174033
reversible: false
product: 174070
product: 174082
reactant: 174058
fast: false
name: 4 amino 2 methyl 5 phosphomethylpyrimidine synthetase
reactant: 174045
notes: GENE_ASSOCIATION: b3994 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
kinetic law: 174118
product: 174106
product: 174094
type: Reaction

200351
value: 0.0
type: LocalParameter

189131
value: 0.0
type: LocalParameter

198621
value: 0.0
type: LocalParameter

183972
kinetic law: 273487
product: 273475
reactant: 273463
notes: GENE_ASSOCIATION: b3846 SUBSYSTEM: Membrane Lipid Metabolism
fast: false
reversible: false
name: Octadecenoyl coa cis trans isomerization
type: Reaction

203586
stoichiometry: 1.0
species: 179501
type: SpeciesReference

184128
kinetic law: 281124
fast: false
reactant: 281088
product: 281100
name: phosphatidylglycerol phosphate phosphatase periplasm n C161
reactant: 281076
product: 281112
notes: GENE_ASSOCIATION: ( b1278 or b0418 ) SUBSYSTEM: Glycerophospholipid Metabolism
reversible: false
type: Reaction

273972
stoichiometry: 1.0
species: 180046
type: SpeciesReference

188385
value: 1000.0
type: LocalParameter

188171
value: 0.0
type: LocalParameter

192637
stoichiometry: 1.0
species: 178743
type: SpeciesReference

268645
stoichiometry: 1.0
species: 179595
type: SpeciesReference

198770
value: 0.0
type: LocalParameter

200352
value: -1000.0
type: LocalParameter

197393
value: 0.0
type: LocalParameter

183971
reversible: false
name: Octaprenyl pyrophosphate synthase
product: 273427
reactant: 273402
kinetic law: 273451
product: 273439
reactant: 273414
fast: false
type: Reaction
notes: GENE_ASSOCIATION: b3187 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis

189132
value: 0.0
type: LocalParameter

183975
reactant: 273571
name: 2 octaprenyl 6 hydroxyphenol methylase
product: 273596
kinetic law: 273620
product: 273608
product: 273584
fast: false
notes: GENE_ASSOCIATION: b2232 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
type: Reaction
reversible: false
reactant: 273559

191472
value: 0.0
type: LocalParameter

198620
value: 0.0
type: LocalParameter

178874
notes: FORMULA: C114H202N2O39P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: cold-adapted-KDO-2-lipid-A
type: Species

252475
stoichiometry: 1.0
species: 178720
type: SpeciesReference

188174
value: 0.0
type: LocalParameter

254019
stoichiometry: 1.0
species: 178368
type: SpeciesReference

196541
value: 1000.0
type: LocalParameter

192638
value: 0.0
type: LocalParameter

212495
stoichiometry: 1.0
species: 178494
type: SpeciesReference

180453
kinetic law: 159382
product: 159370
product: 159358
reactant: 159345
notes: GENE_ASSOCIATION: ( b0180 or b0954 ) SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
reversible: false
name: 3 hydroxyacyl acyl carrier protein dehydratase n C121
type: Reaction

181091
kinetic law: 174021
type: Reaction
name: S adenosylmethione2 demthylmenaquinole methyltransferase menaquinone 8
reactant: 173961
product: 173985
reversible: false
product: 173997
reactant: 173973
product: 174009
notes: GENE_ASSOCIATION: b3833 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
fast: false

189133
value: 0.0
type: LocalParameter

197394
value: -1000.0
type: LocalParameter

200353
value: 1000.0
type: LocalParameter

183974
product: 273523
type: Reaction
fast: false
reactant: 273499
kinetic law: 273547
notes: GENE_ASSOCIATION: b0907 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
name: O Phospho 4 hydroxy L threonine2 oxoglutarate aminotransferase
reactant: 273511
product: 273535
reversible: true

191471
value: 1000.0
type: LocalParameter

227622
stoichiometry: 1.0
species: 179613
type: SpeciesReference

284473
stoichiometry: 1.0
species: 178368
type: SpeciesReference

197395
value: 1000.0
type: LocalParameter

189134
value: 1000.0
type: LocalParameter

304115
stoichiometry: 1.0
species: 179992
type: SpeciesReference

217574
stoichiometry: 1.0
species: 178848
type: SpeciesReference

188382
value: 0.0
type: LocalParameter

193486
value: 0.0
type: LocalParameter

183977
product: 273657
fast: false
reactant: 273645
kinetic law: 273693
product: 273681
reversible: false
reactant: 273633
notes: GENE_ASSOCIATION: b3833 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
product: 273669
type: Reaction
name: 2 Octaprenyl 6 methoxy benzoquinol methylase

241598
stoichiometry: 1.0
species: 178720
type: SpeciesReference

192632
value: -1000.0
type: LocalParameter

287090
stoichiometry: 3.0
species: 178737
type: SpeciesReference

198627
value: -1000.0
type: LocalParameter

198775
value: -1000.0
type: LocalParameter

193487
value: 1000.0
type: LocalParameter

196543
value: 0.0
type: LocalParameter

181097
notes: GENE_ASSOCIATION: ( b0932 or b0237 or b4260 or b2523 ) SUBSYSTEM: Cysteine Metabolism
kinetic law: 174238
reactant: 174202
reactant: 174190
name: alanyl aminopeptidase cys gly
reversible: false
product: 174214
fast: false
type: Reaction
product: 174226

184124
product: 280932
fast: false
reversible: false
notes: GENE_ASSOCIATION: ( b0418 or b1278 ) SUBSYSTEM: Glycerophospholipid Metabolism
name: phosphatidylglycerol phosphate phosphatase n C160
product: 280920
type: Reaction
reactant: 280908
kinetic law: 280944
reactant: 280896

184839
stoichiometry: 1.0
species: 178743
type: SpeciesReference

188381
value: 0.0
type: LocalParameter

219193
stoichiometry: 1.0
species: 179673
type: SpeciesReference

193485
value: 0.0
type: LocalParameter

308784
stoichiometry: 1.0
species: 178743
type: SpeciesReference

253493
stoichiometry: 1.0
species: 178739
type: SpeciesReference

198626
value: 0.0
type: LocalParameter

189136
value: 0.0
type: LocalParameter

186449
value: 1000.0
type: LocalParameter

198774
value: 0.0
type: LocalParameter

197397
value: 0.0
type: LocalParameter

200356
value: 0.0
type: LocalParameter

180456
kinetic law: 159430
product: 159418
product: 159406
reactant: 159394
notes: GENE_ASSOCIATION: ( b0954 or b0180 ) SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
reversible: false
name: 3 hydroxyacyl acyl carrier protein dehydratase n C140
type: Reaction

161581
stoichiometry: 1.0
species: 177797
type: SpeciesReference

196546
value: 0.0
type: LocalParameter

301141
stoichiometry: 1.0
species: 179845
type: SpeciesReference

188170
value: 1000.0
type: LocalParameter

184127
product: 281040
name: phosphatidylglycerol phosphate phosphatase n C161
reversible: false
kinetic law: 281064
fast: false
reactant: 281016
type: Reaction
notes: GENE_ASSOCIATION: ( b0418 or b1278 ) SUBSYSTEM: Glycerophospholipid Metabolism
product: 281052
reactant: 281028

249155
stoichiometry: 1.0
species: 178815
type: SpeciesReference

209843
stoichiometry: 1.0
species: 178743
type: SpeciesReference

169136
stoichiometry: 2.0
species: 178743
type: SpeciesReference

178870
notes: FORMULA: C13H20N3O8S
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: R-S-Lactoylglutathione
type: Species

183452
name: malate synthase
fast: false
kinetic law: 258063
product: 258027
reversible: false
reactant: 257991
product: 258039
notes: GENE_ASSOCIATION: ( b4014 or b2976 ) SUBSYSTEM: Anaplerotic Reactions
product: 258051
reactant: 258015
type: Reaction
reactant: 258003

198625
value: 0.0
type: LocalParameter

198773
value: 0.0
type: LocalParameter

197398
value: 0.0
type: LocalParameter

181095
name: AMP nucleosidase
type: Reaction
reactant: 174142
kinetic law: 174178
reactant: 174130
notes: GENE_ASSOCIATION: b1982 SUBSYSTEM: Nucleotide Salvage Pathway
fast: false
product: 174166
product: 174154
reversible: false

193489
value: 0.0
type: LocalParameter

189137
value: 0.0
type: LocalParameter

196545
value: 0.0
type: LocalParameter

186446
value: 0.0
type: LocalParameter

156183
stoichiometry: 1.0
species: 178743
type: SpeciesReference

202655
stoichiometry: 1.0
species: 179311
type: SpeciesReference

204975
stoichiometry: 1.0
species: 177788
type: SpeciesReference

295006
stoichiometry: 1.0
species: 179671
type: SpeciesReference

183978
reversible: false
product: 273741
notes: GENE_ASSOCIATION: b0073 SUBSYSTEM: Valine Leucine and Isoleucine Metabolism
reactant: 273705
reactant: 273717
fast: false
product: 273729
name: 2 Oxo 4 methyl 3 carboxypentanoate decarboxylation
type: Reaction
kinetic law: 273753

198623
stoichiometry: 1.0
species: 178665
type: SpeciesReference

198624
value: 1000.0
type: LocalParameter

192635
value: 1000.0
type: LocalParameter

264519
stoichiometry: 1.0
species: 178825
type: SpeciesReference

184125
kinetic law: 281004
reactant: 280968
name: phosphatidylglycerol phosphate phosphatase periplasm n C160
type: Reaction
fast: false
reversible: false
notes: GENE_ASSOCIATION: ( b0418 or b1278 ) SUBSYSTEM: Glycerophospholipid Metabolism
product: 280992
product: 280980
reactant: 280956

234938
stoichiometry: 1.0
species: 178656
type: SpeciesReference

198772
value: 1000.0
type: LocalParameter

189138
value: 0.0
type: LocalParameter

163810
stoichiometry: 1.0
species: 179229
type: SpeciesReference

186447
value: 0.0
type: LocalParameter

197399
value: -1000.0
type: LocalParameter

293036
stoichiometry: 1.0
species: 178854
type: SpeciesReference

189139
value: 1000.0
type: LocalParameter

191479
value: 0.0
type: LocalParameter

220521
stoichiometry: 0.2632
species: 178665
type: SpeciesReference

193249
value: -1000.0
type: LocalParameter

277424
stoichiometry: 1.0
species: 179461
type: SpeciesReference

187688
value: 1000.0
type: LocalParameter

247054
stoichiometry: 1.0
species: 178784
type: SpeciesReference

263781
stoichiometry: 1.0
species: 179078
type: SpeciesReference

191478
value: 0.0
type: LocalParameter

193248
value: 0.0
type: LocalParameter

198779
value: 0.0
type: LocalParameter

186444
value: 0.0
type: LocalParameter

181099
product: 174274
reversible: false
reactant: 174250
kinetic law: 174298
product: 174286
name: aminopeptidase pro gly
reactant: 174262
fast: false
notes: GENE_ASSOCIATION: ( b2523 or b4260 or b0237 or b0932 ) SUBSYSTEM: Arginine and Proline Metabolism
type: Reaction

184122
product: 280872
fast: false
name: phosphatidylglycerol phosphate phosphatase periplasm n C141
product: 280860
reactant: 280836
reactant: 280848
notes: GENE_ASSOCIATION: ( b0418 or b1278 ) SUBSYSTEM: Glycerophospholipid Metabolism
type: Reaction
kinetic law: 280884
reversible: false

198777
value: 1000.0
type: LocalParameter

225463
stoichiometry: 1.0
species: 178743
type: SpeciesReference

177643
notes: FORMULA: C7H7O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 3-Dehydroshikimate
type: Species

198778
value: 0.0
type: LocalParameter

209431
stoichiometry: 1.0
species: 178842
type: SpeciesReference

289108
stoichiometry: 1.0
species: 178743
type: SpeciesReference

184121
fast: false
reactant: 280788
product: 280800
name: phosphatidylglycerol phosphate phosphatase n C141
product: 280812
reactant: 280776
reversible: false
type: Reaction
kinetic law: 280824
notes: GENE_ASSOCIATION: ( b0418 or b1278 ) SUBSYSTEM: Glycerophospholipid Metabolism

273329
stoichiometry: 1.0
species: 179259
type: SpeciesReference

193035
value: 0.0
type: LocalParameter

199599
value: 1000.0
type: LocalParameter

178010
notes: FORMULA: C58H83CoN16O14P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Adenosyl-cobinamide-phosphate
type: Species

186442
value: 1000.0
type: LocalParameter

191475
value: 0.0
type: LocalParameter

199719
value: 1000.0
type: LocalParameter

193244
stoichiometry: 1.0
species: 178297
type: SpeciesReference

210144
stoichiometry: 1.0
species: 179169
type: SpeciesReference

224220
stoichiometry: 1.0
species: 178518
type: SpeciesReference

199596
value: 0.0
type: LocalParameter

187684
value: 0.0
type: LocalParameter

193245
value: 0.0
type: LocalParameter

208243
stoichiometry: 1.0
species: 178455
type: SpeciesReference

191474
value: 0.0
type: LocalParameter

186440
value: -1000.0
type: LocalParameter

177646
notes: FORMULA: C10H12N5O8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: 3-GMP
type: Species

248432
stoichiometry: 1.0
species: 178016
type: SpeciesReference

188389
value: 0.0
type: LocalParameter

197390
value: 1000.0
type: LocalParameter

259655
stoichiometry: 1.0
species: 178737
type: SpeciesReference

211650
stoichiometry: 1.0
species: 177655
type: SpeciesReference

232239
stoichiometry: 1.0
species: 178605
type: SpeciesReference

193032
value: 1000.0
type: LocalParameter

187686
value: 0.0
type: LocalParameter

220920
stoichiometry: 2.23E-4
species: 179817
type: SpeciesReference

261598
stoichiometry: 1.0
species: 178749
type: SpeciesReference

157557
stoichiometry: 1.0
species: 178173
type: SpeciesReference

191476
value: 1000.0
type: LocalParameter

160346
stoichiometry: 1.0
species: 178743
type: SpeciesReference

197391
value: 0.0
type: LocalParameter

238577
stoichiometry: 1.0
species: 178693
type: SpeciesReference

177649
notes: FORMULA: C10H12N5O8P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: 3-GMP
type: Species

210288
stoichiometry: 1.0
species: 179169
type: SpeciesReference

187687
value: 0.0
type: LocalParameter

199595
value: 0.0
type: LocalParameter

189982
value: 0.0
type: LocalParameter

208459
stoichiometry: 1.0
species: 179863
type: SpeciesReference

299383
stoichiometry: 1.0
species: 178745
type: SpeciesReference

178004
notes: FORMULA: C10H13N5O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Adenosine
type: Species

187681
value: 0.0
type: LocalParameter

156303
stoichiometry: 1.0
species: 177338
type: SpeciesReference

194869
value: 0.0
type: LocalParameter

189358
value: 0.0
type: LocalParameter

183023
product: 249644
notes: GENE_ASSOCIATION: b0074 SUBSYSTEM: Valine Leucine and Isoleucine Metabolism
reactant: 249594
type: Reaction
reactant: 249620
name: 2 isopropylmalate synthase
kinetic law: 249668
product: 249656
reversible: false
fast: false
reactant: 249607
product: 249632

179827
notes: FORMULA: C4H8NO6P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: L-Threonine-O-3-phosphate
type: Species

182072
kinetic law: 219906
reactant: 219894
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: UDP N acetyl D galactosamine exchange
type: Reaction

187680
value: 0.0
type: LocalParameter

189983
value: 0.0
type: LocalParameter

189357
value: 0.0
type: LocalParameter

290910
stoichiometry: 1.0
species: 178787
type: SpeciesReference

262189
stoichiometry: 1.0
species: 178016
type: SpeciesReference

194868
value: 0.0
type: LocalParameter

263564
stoichiometry: 1.0
species: 179127
type: SpeciesReference

225897
stoichiometry: 1.0
species: 178016
type: SpeciesReference

256318
stoichiometry: 1.0
species: 178585
type: SpeciesReference

193252
value: 1000.0
type: LocalParameter

182073
kinetic law: 219930
reactant: 219918
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: UDPglucose exchange
type: Reaction

283160
stoichiometry: 1.0
species: 177406
type: SpeciesReference

179824
stoichiometry: 1.0
species: 178166
type: SpeciesReference

307183
stoichiometry: 1.0
species: 178743
type: SpeciesReference

212906
stoichiometry: 1.0
species: 178501
type: SpeciesReference

189986
value: 1000.0
type: LocalParameter

187683
value: 1000.0
type: LocalParameter

183026
product: 249753
product: 249716
name: isethionate transport via ABC system periplasm
reversible: false
reactant: 249692
reactant: 249680
fast: false
product: 249741
type: Reaction
product: 249729
kinetic law: 249765
notes: GENE_ASSOCIATION: ( ( b0365 and b0366 and b0367 ) or ( b0936 and b0933 and b0934 ) ) SUBSYSTEM: Transport Inner Membrane
reactant: 249704

246945
stoichiometry: 1.0
species: 179167
type: SpeciesReference

285629
stoichiometry: 1.0
species: 177866
type: SpeciesReference

182070
kinetic law: 219881
reactant: 219869
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: UDP N acetyl D glucosamine exchange
type: Reaction

194867
value: 0.0
type: LocalParameter

179825
notes: FORMULA: C4H8NO6P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: L-Threonine-O-3-phosphate
type: Species

199726
value: 0.0
type: LocalParameter

178005
notes: FORMULA: C10H13N5O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Adenosine
type: Species

160949
stoichiometry: 1.0
species: 177676
type: SpeciesReference

179823
notes: FORMULA: C4H9NO3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: L-Threonine
type: Species

302243
stoichiometry: 1.0
species: 178737
type: SpeciesReference

247270
stoichiometry: 2.0
species: 178745
type: SpeciesReference

199725
value: 0.0
type: LocalParameter

193026
stoichiometry: 1.0
species: 179613
type: SpeciesReference

182076
kinetic law: 219978
reactant: 219966
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: UDP D glucuronate exchange
type: Reaction

255945
stoichiometry: 1.0
species: 178737
type: SpeciesReference

283389
stoichiometry: 1.0
species: 178745
type: SpeciesReference

206382
stoichiometry: 1.0
species: 178737
type: SpeciesReference

194865
value: 1000.0
type: LocalParameter

189989
value: 0.0
type: LocalParameter

179821
notes: FORMULA: C4H9NO3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: L-Threonine
type: Species

199722
value: 0.0
type: LocalParameter

241996
stoichiometry: 1.0
species: 178720
type: SpeciesReference

171587
stoichiometry: 1.0
species: 179589
type: SpeciesReference

295452
stoichiometry: 1.0
species: 178737
type: SpeciesReference

259871
stoichiometry: 1.0
species: 179137
type: SpeciesReference

194864
value: -1000.0
type: LocalParameter

251810
stoichiometry: 1.0
species: 177213
type: SpeciesReference

177640
notes: FORMULA: C7H9O6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 3-Dehydroquinate
type: Species

277207
stoichiometry: 1.0
species: 179589
type: SpeciesReference

293725
stoichiometry: 1.0
species: 178723
type: SpeciesReference

178002
notes: FORMULA: C5H5N5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Adenine
type: Species

193028
value: 0.0
type: LocalParameter

183751
product: 265846
reactant: 265810
reactant: 265834
fast: false
product: 265858
name: NADH dehydrogenase menaquinone 8 0 protons
type: Reaction
kinetic law: 265870
reversible: false
reactant: 265822
notes: GENE_ASSOCIATION: b1109 SUBSYSTEM: Oxidative Phosphorylation

194863
value: 0.0
type: LocalParameter

264930
stoichiometry: 1.0
species: 180000
type: SpeciesReference

180230
notes: FORMULA: C5H10O5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: L-Xylulose
type: Species

218951
stoichiometry: 1.0
species: 179539
type: SpeciesReference

178001
notes: FORMULA: C5H5N5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Adenine
type: Species

300417
stoichiometry: 1.0
species: 178743
type: SpeciesReference

183029
kinetic law: 249802
product: 249789
reactant: 249777
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: isethionate transport via diffusion extracellular to periplasm
type: Reaction

193029
value: 0.0
type: LocalParameter

183753
reactant: 265894
product: 265906
reactant: 265882
name: NAD kinase
fast: false
reversible: false
kinetic law: 265942
notes: GENE_ASSOCIATION: b2615 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
product: 265918
product: 265930
type: Reaction

166009
stoichiometry: 1.0
species: 177977
type: SpeciesReference

253044
stoichiometry: 1.0
species: 177326
type: SpeciesReference

182075
kinetic law: 219954
reactant: 219942
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: UDPgalactose exchange
type: Reaction

194862
value: 0.0
type: LocalParameter

231876
stoichiometry: 1.0
species: 179177
type: SpeciesReference

289530
stoichiometry: 1.0
species: 179467
type: SpeciesReference

200348
value: 0.0
type: LocalParameter

237196
stoichiometry: 1.0
species: 178038
type: SpeciesReference

272700
stoichiometry: 1.0
species: 178128
type: SpeciesReference

183443
kinetic law: 257883
reactant: 257835
reversible: false
product: 257871
notes: GENE_ASSOCIATION: b1800 SUBSYSTEM: Alternate Carbon Metabolism
fast: false
product: 257859
type: Reaction
reactant: 257823
name: malate decarboxylating oxidoreductase decarboxylating
product: 257847

189350
value: 0.0
type: LocalParameter

184835
reversible: true
product: 308159
product: 308171
reactant: 308135
name: Xanthosine transport via proton symport periplasm
kinetic law: 308183
reactant: 308147
notes: GENE_ASSOCIATION: b2406 SUBSYSTEM: Transport Inner Membrane
type: Reaction
fast: false

188167
value: 0.0
type: LocalParameter

225004
stoichiometry: 1.0
species: 178520
type: SpeciesReference

276416
stoichiometry: 1.0
species: 179311
type: SpeciesReference

196535
value: 0.0
type: LocalParameter

194860
value: 1000.0
type: LocalParameter

284257
stoichiometry: 1.0
species: 178745
type: SpeciesReference

193493
value: 1000.0
type: LocalParameter

239494
stoichiometry: 1.0
species: 178173
type: SpeciesReference

180233
notes: FORMULA: Zn
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Zinc
type: Species

180459
kinetic law: 159478
product: 159466
product: 159454
reactant: 159442
notes: GENE_ASSOCIATION: ( b0954 or b0180 ) SUBSYSTEM: Cell Envelope Biosynthesis
fast: false
reversible: false
name: 3 hydroxyacyl acyl carrier protein dehydratase n C141
type: Reaction

291524
stoichiometry: 1.0
species: 180149
type: SpeciesReference

288168
stoichiometry: 1.0
species: 179531
type: SpeciesReference

167500
stoichiometry: 1.0
species: 177927
type: SpeciesReference

192854
value: 1000.0
type: LocalParameter

207083
stoichiometry: 1.0
species: 179463
type: SpeciesReference

198619
value: 1000.0
type: LocalParameter

228108
stoichiometry: 1.0
species: 179725
type: SpeciesReference

183755
name: NAD nucleosidase
reactant: 265966
product: 266002
fast: false
product: 265978
notes: GENE_ASSOCIATION: SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
kinetic law: 266014
product: 265990
reversible: false
reactant: 265954
type: Reaction

203367
stoichiometry: 1.0
species: 179501
type: SpeciesReference

298899
stoichiometry: 1.0
species: 178737
type: SpeciesReference

188390
value: 0.0
type: LocalParameter

180236
notes: FORMULA: Zn
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: Zinc
type: Species

192857
value: 0.0
type: LocalParameter

169995
stoichiometry: 1.0
species: 178098
type: SpeciesReference

192631
value: 0.0
type: LocalParameter

161725
stoichiometry: 1.0
species: 178906
type: SpeciesReference

198616
value: 0.0
type: LocalParameter

182078
kinetic law: 220002
reactant: 219990
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: UMP exchange
type: Reaction

183446
fast: false
name: D Malate transport via proton symport 2 H periplasm
product: 257919
reactant: 257907
kinetic law: 257943
product: 257931
reversible: false
type: Reaction
reactant: 257895
notes: GENE_ASSOCIATION: b3528 SUBSYSTEM: Transport Inner Membrane

184837
kinetic law: 308219
product: 308207
reactant: 308195
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: xanthosine transport via diffusion extracellular to periplasm
type: Reaction

183756
stoichiometry: 1.0
species: 178011
type: SpeciesReference

228736
stoichiometry: 1.0
species: 178745
type: SpeciesReference

188391
value: 1000.0
type: LocalParameter

193495
value: 0.0
type: LocalParameter

196537
value: 0.0
type: LocalParameter

198617
value: -1000.0
type: LocalParameter

182079
kinetic law: 220027
reactant: 220014
notes: GENE_ASSOCIATION: SUBSYSTEM: Exchange
fast: false
reversible: true
name: Uracil exchange
type: Reaction

173740
stoichiometry: 1.0
species: 178932
type: SpeciesReference

207758
stoichiometry: 1.0
species: 178775
type: SpeciesReference

183757
product: 266074
notes: GENE_ASSOCIATION: b3028 SUBSYSTEM: Oxidative Phosphorylation
product: 266062
reactant: 266026
reactant: 266050
name: NADPH Quinone Reductase Ubiquinone 8
reversible: false
kinetic law: 266086
fast: false
type: Reaction
reactant: 266038

184838
kinetic law: 308255
product: 308243
reactant: 308231
notes: GENE_ASSOCIATION: b3565 SUBSYSTEM: Alternate Carbon Metabolism
fast: false
reversible: true
name: xylose isomerase
type: Reaction

196538
value: 0.0
type: LocalParameter

241164
stoichiometry: 1.0
species: 178593
type: SpeciesReference

192851
value: 0.0
type: LocalParameter

283595
stoichiometry: 1.0
species: 177431
type: SpeciesReference

234718
stoichiometry: 1.0
species: 179028
type: SpeciesReference

252692
stoichiometry: 1.0
species: 178744
type: SpeciesReference

240352
stoichiometry: 1.0
species: 178743
type: SpeciesReference

308231
stoichiometry: 1.0
species: 180212
type: SpeciesReference

172099
stoichiometry: 1.0
species: 178737
type: SpeciesReference

178008
notes: FORMULA: C58H84CoN16O11
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Adenosyl-cobinamide
type: Species

184831
kinetic law: 308003
product: 307991
reactant: 307979
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: XMP transport via diffusion extracellular to periplasm
type: Reaction

157039
stoichiometry: 1.0
species: 177394
type: SpeciesReference

192850
value: 0.0
type: LocalParameter

295222
stoichiometry: 1.0
species: 178745
type: SpeciesReference

189353
value: 1000.0
type: LocalParameter

211266
stoichiometry: 1.0
species: 179171
type: SpeciesReference

269054
stoichiometry: 1.0
species: 178743
type: SpeciesReference

217792
stoichiometry: 1.0
species: 178926
type: SpeciesReference

288843
stoichiometry: 1.0
species: 179565
type: SpeciesReference

178876
notes: FORMULA: C114H202N2O39P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177169
name: cold-adapted-KDO-2-lipid-A
type: Species

183759
notes: GENE_ASSOCIATION: b3028 SUBSYSTEM: Oxidative Phosphorylation
reactant: 266122
name: NADPH Quinone Reductase Menaquinone 8
reversible: false
kinetic law: 266159
product: 266134
reactant: 266110
fast: false
type: Reaction
product: 266147
reactant: 266098

178007
notes: FORMULA: C10H13N5O4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Adenosine
type: Species

184832
reactant: 308015
type: Reaction
fast: false
product: 308039
product: 308051
notes: GENE_ASSOCIATION: b0238 SUBSYSTEM: Nucleotide Salvage Pathway
name: xanthine phosphoribosyltransferase
kinetic law: 308063
reversible: false
reactant: 308027

232094
stoichiometry: 1.0
species: 178598
type: SpeciesReference

261248
stoichiometry: 1.0
species: 178173
type: SpeciesReference

179829
notes: FORMULA: C4H8NO2R
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: L-Threonyl-tRNA-Thr
type: Species

189142
value: 0.0
type: LocalParameter

190099
value: 0.0
type: LocalParameter

216184
stoichiometry: 1.0
species: 178598
type: SpeciesReference

294692
stoichiometry: 1.0
species: 178743
type: SpeciesReference

193491
value: 0.0
type: LocalParameter

188165
value: 0.0
type: LocalParameter

281544
stoichiometry: 1.0
species: 178274
type: SpeciesReference

165428
stoichiometry: 1.0
species: 177962
type: SpeciesReference

156859
stoichiometry: 1.0
species: 177595
type: SpeciesReference

189141
value: 0.0
type: LocalParameter

180239
notes: FORMULA: Zn
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: Zinc
type: Species

183020
kinetic law: 249581
product: 249568
reactant: 249555
reactant: 249542
notes: GENE_ASSOCIATION: ( b0071 and b0072 ) SUBSYSTEM: Valine Leucine and Isoleucine Metabolism
fast: false
reversible: true
name: 2 isopropylmalate hydratase
type: Reaction

189355
value: 0.0
type: LocalParameter

171140
stoichiometry: 1.0
species: 178059
type: SpeciesReference

178878
notes: FORMULA: C114H202N2O39P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: cold-adapted-KDO-2-lipid-A
type: Species

193492
value: 0.0
type: LocalParameter

209625
stoichiometry: 1.0
species: 178743
type: SpeciesReference

168208
stoichiometry: 1.0
species: 178016
type: SpeciesReference

188166
value: 0.0
type: LocalParameter

184834
kinetic law: 308123
reactant: 308075
product: 308099
name: Xanthosine hydrolase
product: 308111
reversible: false
fast: false
reactant: 308087
notes: GENE_ASSOCIATION: b0030 SUBSYSTEM: Nucleotide Salvage Pathway
type: Reaction

183449
kinetic law: 257979
product: 257967
reactant: 257955
notes: GENE_ASSOCIATION: ( b1377 or b0929 or b2215 or b0241 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: D Malate transport via diffusion extracellular to periplasm
type: Reaction

308797
stoichiometry: 1.0
species: 179463
type: SpeciesReference

178886
notes: FORMULA: C68H127N2O20P
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: Lipid-A-Disaccharide
type: Species

190093
value: 0.0
type: LocalParameter

266305
stoichiometry: 1.0
species: 178173
type: SpeciesReference

191460
value: 1000.0
type: LocalParameter

183987
kinetic law: 274204
product: 274192
reactant: 274180
reactant: 274168
notes: GENE_ASSOCIATION: b0350 SUBSYSTEM: Alternate Carbon Metabolism
fast: false
reversible: false
name: 2 oxopent 4 enoate hydratase
type: Reaction

189121
value: 0.0
type: LocalParameter

200341
stoichiometry: 1.0
species: 178324
type: SpeciesReference

197382
value: 0.0
type: LocalParameter

196553
value: 0.0
type: LocalParameter

180441
kinetic law: 159200
product: 159188
reactant: 159176
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) SUBSYSTEM: Transport Outer Membrane Porin
fast: false
reversible: true
name: 3CMP transport via diffusion extracellular to periplasm
type: Reaction

227610
stoichiometry: 2.0
species: 178544
type: SpeciesReference

188185
value: 0.0
type: LocalParameter

284461
stoichiometry: 1.0
species: 177242
type: SpeciesReference

303487
stoichiometry: 1.0
species: 179966
type: SpeciesReference

183986
product: 274106
reactant: 274081
type: Reaction
notes: GENE_ASSOCIATION: SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
product: 274143
reactant: 274045
fast: false
product: 274131
product: 274094
reversible: false
reactant: 274069
reactant: 274057
name: 2 octaprenyl 6 methoxyphenol hydroxylase anaerobic
kinetic law: 274155
product: 274118

188399
value: 0.0
type: LocalParameter

189122
value: 0.0
type: LocalParameter

197383
value: -1000.0
type: LocalParameter

183461
kinetic law: 258257
product: 258245
reactant: 258233
notes: GENE_ASSOCIATION: b4036 SUBSYSTEM: Transport Outer Membrane
fast: false
reversible: false
name: maltohexaose transport via diffusion extracellular to periplasm irreversible
type: Reaction

304127
stoichiometry: 1.0
species: 178743
type: SpeciesReference

269283
stoichiometry: 1.0
species: 178737
type: SpeciesReference

186439
value: 0.0
type: LocalParameter

188184
value: 1000.0
type: LocalParameter

178884
notes: FORMULA: C68H126N2O23P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177168
name: 2-3-2-3-Tetrakis-beta-hydroxymyristoyl-D-glucosaminyl-1-6-beta-D-glucosamine-1-4-bisphosphate
type: Species

285413
stoichiometry: 1.0
species: 178745
type: SpeciesReference

198610
value: 0.0
type: LocalParameter

199580
stoichiometry: 1.0
species: 179463
type: SpeciesReference

183985
stoichiometry: 1.0
species: 178737
type: SpeciesReference

197380
value: 0.0
type: LocalParameter

274217
stoichiometry: 1.0
species: 177824
type: SpeciesReference

307809
stoichiometry: 1.0
species: 179169
type: SpeciesReference

196551
value: 0.0
type: LocalParameter

190096
value: 1000.0
type: LocalParameter

188397
value: 1000.0
type: LocalParameter

183984
kinetic law: 274033
product: 274021
reactant: 274009
reactant: 273997
notes: GENE_ASSOCIATION: b2907 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis
fast: false
reversible: false
name: 2 octaprenyl 6 methoxyphenol hydroxylase
type: Reaction

200340
value: 0.0
type: LocalParameter

192625
value: 1000.0
type: LocalParameter

177639
stoichiometry: 1.0
species: 178164
type: SpeciesReference

220305
stoichiometry: 0.2958
species: 178140
type: SpeciesReference

249143
stoichiometry: 1.0
species: 178745
type: SpeciesReference

265352
stoichiometry: 1.0
species: 177887
type: SpeciesReference

169148
stoichiometry: 1.0
species: 179463
type: SpeciesReference

266595
stoichiometry: 3.0
species: 178743
type: SpeciesReference

198612
value: 0.0
type: LocalParameter

186435
value: 1000.0
type: LocalParameter

178882
notes: FORMULA: C110H196N2O39P2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 177171
name: KDO-2-lipid-A
type: Species

161593
stoichiometry: 1.0
species: 177902
type: SpeciesReference

188396
value: 0.0
type: LocalParameter

184139
type: Reaction
product: 281544
notes: GENE_ASSOCIATION: b1912 SUBSYSTEM: Glycerophospholipid Metabolism
kinetic law: 281581
product: 281568
reactant: 281520
name: Phosphatidylglycerol synthase n C141
reversible: false
fast: false
reactant: 281532
product: 281556

295669
stoichiometry: 1.0
species: 178462
type: SpeciesReference

197386
value: 0.0
type: LocalParameter