CDMT01785
stoichiometry: 25.0
species: h c
type: SpeciesReference

uppg3 c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: uppg3
type: Species

CDMT00507
stoichiometry: 1.0
species: alac 45 S c
type: SpeciesReference

CDMT00880
stoichiometry: 1.0
species: atp c
type: SpeciesReference

TRDR
reversible: false
reactant: CDMT00860
reactant: CDMT00858
fast: false
reactant: CDMT00859
product: CDMT00861
name: thioredoxin reductase (NADPH)
type: Reaction
kinetic law: CDMT00863
product: CDMT00862

CDMT02141
exponent: 1.0
scale: 0
multipler: 1.0
kind: METRE
type: SBMLUnit

CDMT01417
stoichiometry: 1.0
species: ugmd c
type: SpeciesReference

CDMT00251
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01921
stoichiometry: 1.0
species: dpcoa c
type: SpeciesReference

ru5p 45 D c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ru5p-D
type: Species

prbamp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: prbamp
type: Species

CDMT00607
stoichiometry: 1.0
species: coa c
type: SpeciesReference

556666
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01880
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT02084
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00795
stoichiometry: 1.0
species: fad c
type: SpeciesReference

CDMT01174
stoichiometry: 1.0
species: glucys c
type: SpeciesReference

CDMT00210
stoichiometry: 1.0
species: 4c2me c
type: SpeciesReference

ctp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ctp
type: Species

CDMT01418
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT00909
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00841
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556729
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00506
stoichiometry: 2.0
species: pyr c
type: SpeciesReference

CDMT01416
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00105
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT02142
exponent: 1.0
scale: 0
multipler: 1.0
kind: SECOND
type: SBMLUnit

met 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: met-L
type: Species

CDMT01786
stoichiometry: 5.0
species: o2 c
type: SpeciesReference

CDMT00881
stoichiometry: 1.0
species: gmhep7p c
type: SpeciesReference

aicar c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: aicar
type: Species

fprica c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: fprica
type: Species

CDMT01922
stoichiometry: 1.0
species: adp c
type: SpeciesReference

PRMICI
kinetic law: CDMT00689
product: CDMT00688
reactant: CDMT00687
fast: false
reversible: false
name: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase
type: Reaction

CDMT00250
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00045
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

EF 5mtr 40 c 41
kinetic law: CDMT01242
reactant: CDMT01240
fast: false
reversible: false
name: 5mtr efflux
type: Reaction

CDMT01881
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556468
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00570
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01745
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00211
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT00608
stoichiometry: 1.0
species: h c
type: SpeciesReference

acglu c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: acglu
type: Species

CDMT00840
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00796
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT01173
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT01961
stoichiometry: 3.0
species: nadp c
type: SpeciesReference

CDMT00719
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01415
stoichiometry: 1.0
species: alaala c
type: SpeciesReference

CDMT01787
stoichiometry: 10.0
species: q8h2 c
type: SpeciesReference

CDMT00505
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01060
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00104
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT00649
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00999
stoichiometry: 1.0
species: trdox c
type: SpeciesReference

CDMT01749
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02082
stoichiometry: 1.0
species: 2p4c2me c
type: SpeciesReference

UAMAS
kinetic law: CDMT01261
fast: false
product: CDMT01260
name: UDP-N-acetylmuramoyl-L-alanine synthetase
reactant: CDMT01254
reactant: CDMT01255
reactant: CDMT01256
product: CDMT01257
reversible: false
product: CDMT01258
product: CDMT01259
type: Reaction

CDMT00042
stoichiometry: 1.0
species: fmnh2 c
type: SpeciesReference

RNDR1
product: CDMT00534
fast: false
reactant: CDMT00531
product: CDMT00533
name: ribonucleoside-diphosphate reductase (ADP)
type: Reaction
reactant: CDMT00532
kinetic law: CDMT00536
product: CDMT00535
reversible: false

CDMT00793
stoichiometry: 1.0
species: fmn c
type: SpeciesReference

ptrc c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ptrc
type: Species

frdp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: frdp
type: Species

CDMT00605
stoichiometry: 1.0
species: glu 45 L c
type: SpeciesReference

556668
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

trdrd c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: trdrd
type: Species

556727
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01960
stoichiometry: 1.0
species: h2s c
type: SpeciesReference

CDMT00504
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01172
stoichiometry: 1.0
species: glu 45 L c
type: SpeciesReference

CDMT01414
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00718
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02140
exponent: 2.0
scale: 0
multipler: 1.0
kind: METRE
type: SBMLUnit

CDMT00103
stoichiometry: 1.0
species: nicrnt c
type: SpeciesReference

CDMT01788
stoichiometry: 25.0
species: h p
type: SpeciesReference

CDMT00043
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

CDMT02083
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT00688
stoichiometry: 1.0
species: prlp c
type: SpeciesReference

CDMT01748
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01920
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT01747
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

sl2a6o c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: sl2a6o
type: Species

CDMT00606
stoichiometry: 1.0
species: acglu c
type: SpeciesReference

fe2 c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: fe2
type: Species

CDMT01061
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01171
stoichiometry: 1.0
species: cys 45 L c
type: SpeciesReference

GHMT2r
reversible: false
product: CDMT00006
name: "glycine hydroxymethyltransferase, reversible"
type: Reaction
reactant: CDMT00002
reactant: CDMT00003
product: CDMT00004
kinetic law: CDMT00007
product: CDMT00005
fast: false

CDMT00503
units: mmol per gDW per hr
value: 100.0
type: LocalParameter

dxyl5p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dxyl5p
type: Species

CDMT00794
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00040
stoichiometry: 1.0
species: fmn c
type: SpeciesReference

DHQS
kinetic law: CDMT00591
product: CDMT00590
product: CDMT00589
reactant: CDMT00588
fast: false
reversible: false
name: 3-dehydroquinate synthase
type: Reaction

CDMT01012
stoichiometry: 1.0
species: glucys c
type: SpeciesReference

CDMT00687
stoichiometry: 1.0
species: prfp c
type: SpeciesReference

CDMT00884
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01351
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT02080
stoichiometry: 1.0
species: 4c2me c
type: SpeciesReference

CDMT00997
stoichiometry: 1.0
species: dudp c
type: SpeciesReference

CDMT00846
stoichiometry: 1.0
species: skm5p c
type: SpeciesReference

CDMT01636
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01789
stoichiometry: 10.0
species: h2o c
type: SpeciesReference

CDMT01413
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01990
stoichiometry: 1.0
species: Biomass c
type: SpeciesReference

CDMT01814
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01170
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00502
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00799
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00646
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00845
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01062
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00573
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01202
stoichiometry: 1.0
species: ipdp c
type: SpeciesReference

556662
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00905
stoichiometry: 1.0
species: h c
type: SpeciesReference

RNDR3
kinetic law: CDMT00518
fast: false
name: ribonucleoside-diphosphate reductase (CDP)
reactant: CDMT00514
type: Reaction
product: CDMT00517
reversible: false
reactant: CDMT00513
product: CDMT00516
product: CDMT00515

CDMT00686
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01013
stoichiometry: 1.0
species: gly c
type: SpeciesReference

CDMT00041
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

gmp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: gmp
type: Species

CDMT00998
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

area
unit: CDMT02140
name: area
type: SBMLUnitsDef

CDMT02081
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT01352
stoichiometry: 2.0
species: h2o c
type: SpeciesReference

CDMT00716
stoichiometry: 1.0
species: pyr c
type: SpeciesReference

CDMT00648
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01412
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01637
stoichiometry: 1.0
species: ac c
type: SpeciesReference

CDMT01812
stoichiometry: 1.0
species: utp c
type: SpeciesReference

CDMT01638
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00574
stoichiometry: 1.0
species: 5apru c
type: SpeciesReference

CDMT00844
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT00360
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01063
stoichiometry: 1.0
species: acg5p c
type: SpeciesReference

CDMT00647
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

s7p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: s7p
type: Species

CDMT01203
stoichiometry: 1.0
species: grdp c
type: SpeciesReference

CDMT00904
stoichiometry: 1.0
species: uagmda c
type: SpeciesReference

RNDR2
reactant: CDMT00522
name: ribonucleoside-diphosphate reductase (GDP)
kinetic law: CDMT00527
reversible: false
product: CDMT00524
product: CDMT00526
fast: false
product: CDMT00525
reactant: CDMT00523
type: Reaction

CDMT00882
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT00995
stoichiometry: 1.0
species: trdrd c
type: SpeciesReference

CDMT00685
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01010
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00108
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00715
stoichiometry: 1.0
species: mnl1p c
type: SpeciesReference

CDMT00500
stoichiometry: 1.0
species: glu 45 L c
type: SpeciesReference

CDMT00843
stoichiometry: 1.0
species: skm c
type: SpeciesReference

CDMT01064
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01200
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00644
stoichiometry: 1.0
species: g3p c
type: SpeciesReference

CDMT01639
stoichiometry: 1.0
species: actp c
type: SpeciesReference

CDMT01811
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT00109
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

spmd c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: spmd
type: Species

gua c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: gua
type: Species

CDMT00907
stoichiometry: 1.0
species: udp c
type: SpeciesReference

556664
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00571
stoichiometry: 1.0
species: 25drapp c
type: SpeciesReference

CDMT00996
stoichiometry: 1.0
species: udp c
type: SpeciesReference

CDMT00684
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01011
stoichiometry: 1.0
species: atp c
type: SpeciesReference

UAMAGS
reactant: CDMT00067
product: CDMT00069
reactant: CDMT00065
kinetic law: CDMT00072
name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
reactant: CDMT00066
product: CDMT00068
reversible: false
product: CDMT00071
fast: false
product: CDMT00070
type: Reaction

CDMT01350
stoichiometry: 1.0
species: 23dhdp c
type: SpeciesReference

CDMT00883
stoichiometry: 1.0
species: gmhep17bp c
type: SpeciesReference

CDMT00107
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00714
stoichiometry: 1.0
species: pep c
type: SpeciesReference

ugmda c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ugmda
type: Species

CDMT01410
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00713
stoichiometry: 1.0
species: mnl p
type: SpeciesReference

CDMT00798
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00842
stoichiometry: 1.0
species: atp c
type: SpeciesReference

25drapp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 25drapp
type: Species

CDMT01065
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

RNDR4
reversible: false
kinetic law: CDMT01000
fast: false
product: CDMT00997
reactant: CDMT00995
name: ribonucleoside-diphosphate reductase (UDP)
product: CDMT00999
reactant: CDMT00996
type: Reaction
product: CDMT00998

CDMT01810
stoichiometry: 1.0
species: udp c
type: SpeciesReference

CDMT00906
stoichiometry: 1.0
species: uaagmda c
type: SpeciesReference

CDMT01839
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01201
stoichiometry: 1.0
species: dmpp c
type: SpeciesReference

CDMT00572
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00901
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

fmn c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: fmn
type: Species

CDMT01311
stoichiometry: 1.0
species: 3mob c
type: SpeciesReference

556771
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01674
stoichiometry: 0.239
species: met 45 L c
type: SpeciesReference

CDMT00363
stoichiometry: 1.0
species: prpp c
type: SpeciesReference

CDMT00642
stoichiometry: 1.0
species: xu5p 45 D c
type: SpeciesReference

CDMT00954
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01396
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00259
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01355
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

UAGCVT
kinetic law: CDMT01094
product: CDMT01093
product: CDMT01092
reactant: CDMT01091
reactant: CDMT01090
fast: false
reversible: false
name: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
type: Reaction

CDMT00321
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01016
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01632
stoichiometry: 1.0
species: ru5p 45 D c
type: SpeciesReference

dtbt c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dtbt
type: Species

CDMT00993
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00888
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00900
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

SHK3Dr
product: CDMT01218
reactant: CDMT01215
reactant: CDMT01216
product: CDMT01219
fast: false
name: shikimate dehydrogenase
reactant: CDMT01217
reversible: false
kinetic law: CDMT01220
type: Reaction

CDMT01312
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01675
stoichiometry: 0.807547
species: 4mop c
type: SpeciesReference

556772
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556847
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00643
stoichiometry: 1.0
species: f6p c
type: SpeciesReference

CDMT00364
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT01395
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

murein5p5p p
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: p
name: murein5p5p
type: Species

CDMT00953
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01356
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00258
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01017
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT00322
stoichiometry: 1.0
species: g3p c
type: SpeciesReference

CDMT01569
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT02025
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00994
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

10fthf c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 10fthf
type: Species

HSK
reversible: false
product: CDMT00182
kinetic law: CDMT00185
reactant: CDMT00180
fast: false
type: Reaction
product: CDMT00184
product: CDMT00183
name: homoserine kinase
reactant: CDMT00181

CDMT00889
stoichiometry: 1.0
species: phe 45 L c
type: SpeciesReference

CDMT01740
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

2me4p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 2me4p
type: Species

CDMT00903
stoichiometry: 1.0
species: uacgam c
type: SpeciesReference

CDMT00952
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00640
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01394
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00361
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01672
stoichiometry: 0.115384
species: his 45 L c
type: SpeciesReference

CDMT00323
stoichiometry: 1.0
species: nad c
type: SpeciesReference

CDMT01014
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT01568
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556844
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02022
stoichiometry: 1.0
species: gam6p c
type: SpeciesReference

fum c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: fum
type: Species

CDMT01634
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

scl c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: scl
type: Species

apoACP c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: apoACP
type: Species

NADK
type: Reaction
product: CDMT01048
name: NAD kinase
reactant: CDMT01047
product: CDMT01049
reversible: false
fast: false
kinetic law: CDMT01051
product: CDMT01050
reactant: CDMT01046

CDMT00886
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556774
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00902
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01310
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01967
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01673
stoichiometry: 0.571929
species: lys 45 L c
type: SpeciesReference

CDMT00362
stoichiometry: 1.0
species: atp c
type: SpeciesReference

556845
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00641
stoichiometry: 1.0
species: e4p c
type: SpeciesReference

ipdp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ipdp
type: Species

CDMT02023
stoichiometry: 1.0
species: glu 45 L c
type: SpeciesReference

CDMT00256
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

CDMT01968
stoichiometry: 1.0
species: imacp c
type: SpeciesReference

CDMT00324
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01015
stoichiometry: 1.0
species: gthrd c
type: SpeciesReference

ASAD
type: Reaction
reactant: CDMT01619
reactant: CDMT01620
kinetic law: CDMT01624
reactant: CDMT01618
product: CDMT01623
reversible: false
fast: false
product: CDMT01621
name: aspartate-semialdehyde dehydrogenase
product: CDMT01622

EN apoACP
kinetic law: CDMT01543
reactant: CDMT01541
fast: false
reversible: false
name: apoACP exchange
type: Reaction

CDMT01635
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00887
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01354
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00992
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01670
stoichiometry: 0.332
species: phpyr c
type: SpeciesReference

CDMT01283
stoichiometry: 1.0
species: ade c
type: SpeciesReference

CDMT01966
stoichiometry: 1.0
species: eig3p c
type: SpeciesReference

GND
reactant: CDMT01629
product: CDMT01630
fast: false
product: CDMT01632
name: phosphogluconate dehydrogenase
product: CDMT01631
reactant: CDMT01628
kinetic law: CDMT01633
reversible: false
type: Reaction

CDMT00089
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556775
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00367
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01742
stoichiometry: 1.0
species: 6pgl c
type: SpeciesReference

CDMT02088
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02028
stoichiometry: 1.0
species: dscl c
type: SpeciesReference

CDMT00466
stoichiometry: 1.0
species: r5p c
type: SpeciesReference

methf c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: methf
type: Species

CDMT00048
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT00325
stoichiometry: 1.0
species: 13dpg c
type: SpeciesReference

UAGDP
reactant: CDMT01602
product: CDMT01604
reactant: CDMT01601
reversible: false
reactant: CDMT01603
kinetic law: CDMT01606
fast: false
type: Reaction
product: CDMT01605
name: UDP-N-acetylglucosamine diphosphorylase

556842
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00255
stoichiometry: 1.0
species: methf c
type: SpeciesReference

CDMT01359
stoichiometry: 1.0
species: murein5p5p p
type: SpeciesReference

HSTPT
kinetic law: CDMT00283
product: CDMT00282
product: CDMT00281
reactant: CDMT00280
reactant: CDMT00279
fast: false
reversible: false
name: histidinol-phosphate transaminase
type: Reaction

CDMT01965
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01671
stoichiometry: 0.468
species: 3mop c
type: SpeciesReference

GLUCYS
fast: false
product: CDMT01175
product: CDMT01174
reactant: CDMT01172
type: Reaction
reversible: false
product: CDMT01173
name: gamma-glutamylcysteine synthetase
reactant: CDMT01171
product: CDMT01176
kinetic law: CDMT01177
reactant: CDMT01170

CDMT01399
stoichiometry: 1.0
species: pyr c
type: SpeciesReference

hisp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: hisp
type: Species

23dhdp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 23dhdp
type: Species

CDMT01741
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02089
stoichiometry: 45.0
species: h c
type: SpeciesReference

CDMT00368
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

pheme c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: pheme
type: Species

CDMT00254
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

CDMT02029
stoichiometry: 1.0
species: nad c
type: SpeciesReference

556561
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00467
stoichiometry: 1.0
species: xu5p 45 D c
type: SpeciesReference

CDMT00326
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00049
stoichiometry: 1.0
species: prbatp c
type: SpeciesReference

uacgam c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: uacgam
type: Species

EF his 45 L 40 c 41
kinetic law: CDMT00121
reactant: CDMT00119
fast: false
reversible: false
name: Histidine exchange
type: Reaction

CDMT00990
stoichiometry: 1.0
species: nad c
type: SpeciesReference

CDMT01398
stoichiometry: 1.0
species: nad c
type: SpeciesReference

CDMT00087
stoichiometry: 1.0
species: trdox c
type: SpeciesReference

pan4p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: pan4p
type: Species

CDMT01964
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01281
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00365
stoichiometry: 1.0
species: prbatp c
type: SpeciesReference

CDMT01458
stoichiometry: 1.0
species: gua c
type: SpeciesReference

nad c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: nad
type: Species

CDMT02086
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

dadp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dadp
type: Species

CDMT01744
stoichiometry: 1.0
species: 6pgc c
type: SpeciesReference

556777
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02026
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00468
stoichiometry: 1.0
species: g3p c
type: SpeciesReference

CDMT00253
stoichiometry: 1.0
species: mlthf c
type: SpeciesReference

orot5p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: orot5p
type: Species

PSCVT
kinetic law: CDMT00486
product: CDMT00485
product: CDMT00484
reactant: CDMT00483
reactant: CDMT00482
fast: false
reversible: false
name: 3-phosphoshikimate 1-carboxyvinyltransferase
type: Reaction

CDMT01630
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

CDMT00046
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01357
stoichiometry: 2.0
species: uaagmda c
type: SpeciesReference

CDMT00327
stoichiometry: 1.0
species: nadh c
type: SpeciesReference

556840
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00329
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

3psme c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 3psme
type: Species

CDMT01963
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00086
stoichiometry: 1.0
species: so3 c
type: SpeciesReference

CDMT01397
stoichiometry: 1.0
species: coa c
type: SpeciesReference

CDMT01419
stoichiometry: 1.0
species: h c
type: SpeciesReference

556619
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

GLUR
kinetic law: CDMT00629
product: CDMT00628
reactant: CDMT00627
fast: false
reversible: false
name: glutamate racemase
type: Reaction

arg 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: arg-L
type: Species

CDMT01743
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

556778
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02087
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT02027
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00469
stoichiometry: 1.0
species: s7p c
type: SpeciesReference

CDMT00252
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556563
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01631
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

CDMT01280
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

p
constant: true
units: volume
size: 1.0
spatial dimensions: 3.0
name: _p_
type: Compartment

EF fum 40 c 41
kinetic law: CDMT00297
reactant: CDMT00295
fast: false
reversible: false
name: fum efflux
type: Reaction

CDMT01019
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00047
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01358
stoichiometry: 2.0
species: h c
type: SpeciesReference

556565
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00463
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CLPNS EC
kinetic law: CDMT02076
product: CDMT02075
product: CDMT02074
reactant: CDMT02073
fast: false
reversible: false
name: Cardiolipin Synthase (E.coli)
type: Reaction

PUNP5
kinetic law: CDMT01467
product: CDMT01466
product: CDMT01465
reactant: CDMT01464
reactant: CDMT01463
fast: false
reversible: false
name: purine-nucleoside phosphorylase (Inosine)
type: Reaction

CDMT01235
stoichiometry: 1.0
species: coa c
type: SpeciesReference

CDMT01561
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556526
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01122
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01840
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00198
stoichiometry: 1.0
species: h2mb4p c
type: SpeciesReference

CDMT00157
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01457
stoichiometry: 1.0
species: 2dr1p c
type: SpeciesReference

ile 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ile-L
type: Species

CDMT01274
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00425
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00096
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556629
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

PUNP4
kinetic law: CDMT01459
product: CDMT01458
product: CDMT01457
reactant: CDMT01456
reactant: CDMT01455
fast: false
reversible: false
name: purine-nucleoside phosphorylase (Deoxyguanosine)
type: Reaction

CDMT01234
stoichiometry: 1.0
species: actp c
type: SpeciesReference

CDMT01562
stoichiometry: 1.0
species: 2dhp c
type: SpeciesReference

udcpp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: udcpp
type: Species

CDMT01841
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT01121
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00530
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00197
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00158
stoichiometry: 1.0
species: for c
type: SpeciesReference

cys 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: cys-L
type: Species

THRS
kinetic law: CDMT00291
product: CDMT00290
product: CDMT00289
reactant: CDMT00288
reactant: CDMT00287
fast: false
reversible: false
name: threonine synthase
type: Reaction

CDMT01456
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT00145
stoichiometry: 1.0
species: thdp c
type: SpeciesReference

CDMT01275
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00097
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

ACLS
kinetic law: CDMT00509
product: CDMT00508
product: CDMT00507
reactant: CDMT00506
reactant: CDMT00505
fast: false
reversible: false
name: acetolactate synthase
type: Reaction

ACKr
kinetic law: CDMT01641
product: CDMT01640
product: CDMT01639
reactant: CDMT01638
reactant: CDMT01637
fast: false
reversible: false
name: acetate kinase
type: Reaction

RPE
kinetic law: CDMT00275
product: CDMT00274
reactant: CDMT00273
fast: false
reversible: false
name: ribulose 5-phosphate 3-epimerase
type: Reaction

CDMT00424
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

hco3 c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: hco3
type: Species

556567
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

dpcoa c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dpcoa
type: Species

CDMT00948
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

PUNP3
kinetic law: CDMT01516
product: CDMT01515
product: CDMT01514
reactant: CDMT01513
reactant: CDMT01512
fast: false
reversible: false
name: purine-nucleoside phosphorylase (Guanosine)
type: Reaction

CDMT00196
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

utp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: utp
type: Species

CDMT01999
stoichiometry: 1.0
species: sl26da c
type: SpeciesReference

CDMT01319
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01120
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

556528
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01233
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT00465
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01521
stoichiometry: 1.0
species: pi p
type: SpeciesReference

CDMT01455
stoichiometry: 1.0
species: dgsn c
type: SpeciesReference

CDMT01318
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00155
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

556627
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00144
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

PUNP2
kinetic law: CDMT01508
product: CDMT01507
product: CDMT01506
reactant: CDMT01505
reactant: CDMT01504
fast: false
reversible: false
name: purine-nucleoside phosphorylase (Deoxyadenosine)
type: Reaction

CDMT00949
stoichiometry: 1.0
species: leu 45 L c
type: SpeciesReference

CDMT00464
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00195
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

PPNDH
name: prephenate dehydratase
kinetic law: CDMT01738
product: CDMT01735
fast: false
product: CDMT01736
reactant: CDMT01733
product: CDMT01737
reactant: CDMT01734
type: Reaction
reversible: false

CDMT01232
stoichiometry: 1.0
species: accoa c
type: SpeciesReference

CDMT01560
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01454
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00369
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01317
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00156
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00095
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01273
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00143
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

CDMT00422
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT00768
stoichiometry: 1.0
species: 2ahbut c
type: SpeciesReference

CDMT00533
stoichiometry: 1.0
species: dadp c
type: SpeciesReference

CDMT01239
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

UP gln 45 L 40 c 41
kinetic law: CDMT01729
product: CDMT01728
fast: false
reversible: false
name: gln-L exchange
type: Reaction

CDMT00092
stoichiometry: 1.0
species: g6p c
type: SpeciesReference

556730
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01565
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

CDMT00946
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

556569
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

e4p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: e4p
type: Species

CDMT01453
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556839
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556625
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00421
stoichiometry: 1.0
species: pnto 45 R c
type: SpeciesReference

26dap 45 LL c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 26dap-LL
type: Species

glyc c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: glyc
type: Species

26dap 45 M c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 26dap-M
type: Species

CDMT01679
stoichiometry: 0.60909
species: 3mob c
type: SpeciesReference

CDMT01523
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00769
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00767
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

udp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: udp
type: Species

CDMT00534
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01238
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00947
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01566
stoichiometry: 1.0
species: pant 45 R c
type: SpeciesReference

CDMT02032
stoichiometry: 1.0
species: scl c
type: SpeciesReference

UAGPT3
product: CDMT00907
type: Reaction
reversible: false
reactant: CDMT00903
product: CDMT00906
name: UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
product: CDMT00905
fast: false
kinetic law: CDMT00908
reactant: CDMT00904

CDMT00420
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01452
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00093
stoichiometry: 1.0
species: f6p c
type: SpeciesReference

CDMT01315
stoichiometry: 1.0
species: thf c
type: SpeciesReference

CDMT00149
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01524
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01279
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01678
stoichiometry: 0.069
species: trp 45 L c
type: SpeciesReference

CDMT00320
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

CDMT00531
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT01563
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00766
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT02031
stoichiometry: 1.0
species: nadh c
type: SpeciesReference

CDMT01237
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

556623
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00461
stoichiometry: 1.0
species: lys 45 L c
type: SpeciesReference

CDMT00090
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556837
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01276
stoichiometry: 1.0
species: gam1p c
type: SpeciesReference

CDMT00943
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

RBFK
product: CDMT00309
type: Reaction
kinetic law: CDMT00312
reversible: false
product: CDMT00311
fast: false
product: CDMT00310
name: riboflavin kinase
reactant: CDMT00307
reactant: CDMT00308

CDMT01314
stoichiometry: 1.0
species: 2dhp c
type: SpeciesReference

CDMT00148
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01525
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01677
stoichiometry: 0.482
species: thr 45 L c
type: SpeciesReference

IPPMIb
kinetic law: CDMT01868
product: CDMT01867
product: CDMT01866
reactant: CDMT01865
fast: false
reversible: false
name: 2-isopropylmalate hydratase
type: Reaction

CDMT00199
stoichiometry: 1.0
species: nadh c
type: SpeciesReference

6pgc c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 6pgc
type: Species

BPNT
kinetic law: CDMT02047
product: CDMT02046
product: CDMT02045
reactant: CDMT02044
reactant: CDMT02043
fast: false
reversible: false
name: 3',5'-bisphosphate nucleotidase
type: Reaction

CDMT00765
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

EF gly 40 c 41
kinetic law: CDMT00127
reactant: CDMT00125
fast: false
reversible: false
name: gly exchange
type: Reaction

CDMT00532
stoichiometry: 1.0
species: trdrd c
type: SpeciesReference

3mob c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 3mob
type: Species

CDMT02139
exponent: 1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

CDMT00460
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

PUNP6
kinetic law: CDMT01475
product: CDMT01474
product: CDMT01473
reactant: CDMT01472
reactant: CDMT01471
fast: false
reversible: false
name: purine-nucleoside phosphorylase (Deoxyinosine)
type: Reaction

CDMT02030
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01564
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

CDMT00091
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

pg EC c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: pg_EC
type: Species

556836
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00944
stoichiometry: 1.0
species: 3c2hmp c
type: SpeciesReference

CDMT01450
stoichiometry: 1.0
species: trp 45 L c
type: SpeciesReference

CDMT01277
stoichiometry: 1.0
species: gam6p c
type: SpeciesReference

CDMT00147
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01313
stoichiometry: 1.0
species: mlthf c
type: SpeciesReference

IPPMIa
kinetic law: CDMT00945
product: CDMT00944
reactant: CDMT00943
reactant: CDMT00942
fast: false
reversible: false
name: 3-isopropylmalate dehydratase
type: Reaction

CDMT01676
stoichiometry: 0.364935
species: arg 45 L c
type: SpeciesReference

aps c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: aps
type: Species

CDMT01526
stoichiometry: 1.0
species: fdp c
type: SpeciesReference

CDMT01527
stoichiometry: 1.0
species: dhap c
type: SpeciesReference

CDMT01207
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01849
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00538
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01919
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01169
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00723
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

h p
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: p
name: h
type: Species

CDMT01055
stoichiometry: 1.0
species: 3c4mop c
type: SpeciesReference

CDMT00578
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01889
stoichiometry: 1.0
species: gmhep1p c
type: SpeciesReference

556460
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00682
stoichiometry: 1.0
species: adp c
type: SpeciesReference

556621
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02138
exponent: 1.0
scale: 0
multipler: 1.0
kind: MOLE
type: SBMLUnit

CDMT00611
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01993
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

GRTT
kinetic law: CDMT00899
product: CDMT00898
product: CDMT00897
reactant: CDMT00896
reactant: CDMT00895
fast: false
reversible: false
name: geranyltranstransferase
type: Reaction

CDMT00537
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

adp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: adp
type: Species

CDMT01528
stoichiometry: 1.0
species: g3p c
type: SpeciesReference

CDMT01206
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00539
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01918
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

EF trp 45 L 40 c 41
kinetic law: CDMT01916
reactant: CDMT01914
fast: false
reversible: false
name: Tryptophan exchange
type: Reaction

CDMT00218
stoichiometry: 1.0
species: acorn c
type: SpeciesReference

CDMT00724
stoichiometry: 1.0
species: 5aprbu c
type: SpeciesReference

CDMT00577
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00150
stoichiometry: 1.0
species: 10fthf c
type: SpeciesReference

CDMT01054
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01888
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT01129
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01806
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00725
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

556733
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01994
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00219
stoichiometry: 1.0
species: akg c
type: SpeciesReference

CDMT02137
exponent: -1.0
scale: 0
multipler: 2.7777E-4
kind: SECOND
type: SBMLUnit

CDMT00763
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

CDMT00610
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00217
stoichiometry: 1.0
species: glu 45 L c
type: SpeciesReference

NADS1
product: CDMT00431
type: Reaction
fast: false
kinetic law: CDMT00434
product: CDMT00430
product: CDMT00433
reversible: false
reactant: CDMT00427
reactant: CDMT00428
product: CDMT00432
name: NAD synthase (nh3)
reactant: CDMT00429

CDMT01917
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01847
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556520
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01057
stoichiometry: 1.0
species: 4mop c
type: SpeciesReference

556462
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01887
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01802
stoichiometry: 1.0
species: prpp c
type: SpeciesReference

gam6p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: gam6p
type: Species

CDMT00721
stoichiometry: 1.0
species: 5apru c
type: SpeciesReference

CDMT01167
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00834
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

thmpp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: thmpp
type: Species

CDMT00835
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556732
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

LOWER BOUND
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01803
stoichiometry: 1.0
species: imp c
type: SpeciesReference

ppi c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ppi
type: Species

CDMT00680
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00762
stoichiometry: 1.0
species: 23dhmb c
type: SpeciesReference

CDMT01780
stoichiometry: 1.0
species: datp c
type: SpeciesReference

citr 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: citr-L
type: Species

CDMT01846
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00535
stoichiometry: 1.0
species: trdox c
type: SpeciesReference

CDMT02136
exponent: -1.0
scale: 0
multipler: 1.0
kind: GRAM
type: SBMLUnit

CDMT01168
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00216
stoichiometry: 1.0
species: acg5sa c
type: SpeciesReference

CDMT01204
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT01848
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556660
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01056
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01886
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

CDMT00575
stoichiometry: 1.0
species: nh4 c
type: SpeciesReference

CDMT00722
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT02135
exponent: 1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

CDMT01127
stoichiometry: 1.0
species: nad c
type: SpeciesReference

CDMT00836
stoichiometry: 1.0
species: thr 45 L c
type: SpeciesReference

CDMT00681
stoichiometry: 1.0
species: acg5p c
type: SpeciesReference

CDMT01804
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

gsn c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: gsn
type: Species

CDMT00761
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

556738
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01165
stoichiometry: 1.0
species: succ c
type: SpeciesReference

CDMT01885
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00142
stoichiometry: 1.0
species: h c
type: SpeciesReference

IG3PS
product: CDMT00387
type: Reaction
product: CDMT00384
kinetic law: CDMT00388
reactant: CDMT00382
reactant: CDMT00383
product: CDMT00386
reversible: false
product: CDMT00385
name: Imidazole-glycerol-3-phosphate synthase
fast: false

CDMT00153
stoichiometry: 1.0
species: thf c
type: SpeciesReference

CDMT00792
stoichiometry: 1.0
species: atp c
type: SpeciesReference

556464
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556522
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00215
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00616
stoichiometry: 1.0
species: coa c
type: SpeciesReference

CDMT01231
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01844
stoichiometry: 1.0
species: dctp c
type: SpeciesReference

acgam1p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: acgam1p
type: Species

CDMT01997
stoichiometry: 1.0
species: sl2a6o c
type: SpeciesReference

CDMT01782
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

PUNP1
kinetic law: CDMT01500
product: CDMT01499
product: CDMT01498
reactant: CDMT01497
reactant: CDMT01496
fast: false
reversible: false
name: purine-nucleoside phosphorylase (Adenosine)
type: Reaction

CDMT00760
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01126
stoichiometry: 1.0
species: 5mthf c
type: SpeciesReference

CDMT01809
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00101
stoichiometry: 1.0
species: prpp c
type: SpeciesReference

db4p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: db4p
type: Species

CDMT02134
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00141
stoichiometry: 1.0
species: 23dhdp c
type: SpeciesReference

UP glc 45 D 40 p 41
kinetic law: CDMT02101
product: CDMT02100
fast: false
reversible: false
name: D-glucose uptake
type: Reaction

CDMT00720
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01058
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

CDMT01914
stoichiometry: 1.0
species: trp 45 L c
type: SpeciesReference

CDMT00214
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00791
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00615
stoichiometry: 1.0
species: acser c
type: SpeciesReference

CDMT00614
stoichiometry: 1.0
species: ser 45 L c
type: SpeciesReference

CDMT01230
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01998
stoichiometry: 1.0
species: akg c
type: SpeciesReference

MTHFC
kinetic law: CDMT01411
product: CDMT01410
product: CDMT01409
reactant: CDMT01408
reactant: CDMT01407
fast: false
reversible: false
name: methenyltetrahydrofolate cyclohydrolase
type: Reaction

CDMT00429
stoichiometry: 1.0
species: nh4 c
type: SpeciesReference

CDMT00102
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT01125
stoichiometry: 1.0
species: nadh c
type: SpeciesReference

CDMT02133
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01163
stoichiometry: 1.0
species: sl26da c
type: SpeciesReference

CDMT00140
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00427
stoichiometry: 1.0
species: atp c
type: SpeciesReference

25aics c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 25aics
type: Species

CDMT01883
stoichiometry: 1.0
species: hcys 45 L c
type: SpeciesReference

GAPD
type: Reaction
reversible: false
product: CDMT00327
kinetic law: CDMT00328
reactant: CDMT00324
product: CDMT00326
fast: false
reactant: CDMT00322
name: glyceraldehyde-3-phosphate dehydrogenase
reactant: CDMT00323
product: CDMT00325

CDMT00151
stoichiometry: 1.0
species: aicar c
type: SpeciesReference

556736
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556524
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556466
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00790
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

CDMT00213
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01913
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01912
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

ACHBS
name: 2-aceto-2-hydroxybutanoate synthase
fast: false
product: CDMT00916
kinetic law: CDMT00917
reactant: CDMT00914
type: Reaction
reversible: false
reactant: CDMT00913
reactant: CDMT00912
product: CDMT00915

CDMT01995
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00613
stoichiometry: 1.0
species: accoa c
type: SpeciesReference

CDMT01842
stoichiometry: 1.0
species: dcdp c
type: SpeciesReference

CDMT01807
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT02132
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01124
stoichiometry: 1.0
species: mlthf c
type: SpeciesReference

CDMT01784
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00428
stoichiometry: 1.0
species: dnad c
type: SpeciesReference

CDMT00839
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00152
stoichiometry: 1.0
species: fprica c
type: SpeciesReference

CDMT00426
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00579
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01164
stoichiometry: 1.0
species: 26dap 45 LL c
type: SpeciesReference

556735
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

argsuc c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: argsuc
type: Species

CDMT01208
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

S7PI
kinetic law: CDMT00551
product: CDMT00550
reactant: CDMT00549
fast: false
reversible: false
name: sedoheptulose 7-phosphate isomerase
type: Reaction

CDMT01783
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01911
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01843
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT00612
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00100
stoichiometry: 1.0
species: nac c
type: SpeciesReference

CDMT01123
stoichiometry: 2.0
species: h c
type: SpeciesReference

CDMT01996
stoichiometry: 1.0
species: glu 45 L c
type: SpeciesReference

dgdp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dgdp
type: Species

CDMT01808
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

GTPCII2
reactant: CDMT01288
type: Reaction
name: GTP cyclohydrolase II (25drapp)
product: CDMT01290
product: CDMT01292
kinetic law: CDMT01294
reactant: CDMT01289
reversible: false
product: CDMT01291
product: CDMT01293
fast: false

DHDPRy
reversible: false
reactant: CDMT00142
fast: false
reactant: CDMT00141
type: Reaction
reactant: CDMT00143
kinetic law: CDMT00146
product: CDMT00145
product: CDMT00144
name: dihydrodipicolinate reductase (NADPH)

CDMT02070
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01737
stoichiometry: 1.0
species: phpyr c
type: SpeciesReference

val 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: val-L
type: Species

556769
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00054
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00398
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00707
stoichiometry: 1.0
species: adp c
type: SpeciesReference

KARA1
reactant: CDMT00760
kinetic law: CDMT00764
fast: false
reactant: CDMT00761
reversible: false
type: Reaction
product: CDMT00762
name: "ketol-acid reductoisomerase (2,3-dihydroxy-3-methylbutanoate)"
reactant: CDMT00759
product: CDMT00763

CDMT01775
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

556715
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01160
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00851
stoichiometry: 1.0
species: 25aics c
type: SpeciesReference

uamr c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: uamr
type: Species

CDMT01890
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00802
stoichiometry: 1.0
species: so4 c
type: SpeciesReference

UP ala 45 B
kinetic law: CDMT00695
product: CDMT00694
fast: false
reversible: false
name: ala-B exchange
type: Reaction

CDMT01736
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

556656
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02071
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00800
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00055
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

ASPCT
name: aspartate carbamoyltransferase
kinetic law: CDMT00545
fast: false
reversible: false
reactant: CDMT00540
product: CDMT00544
type: Reaction
reactant: CDMT00541
product: CDMT00543
product: CDMT00542

CDMT00397
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01776
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00706
stoichiometry: 1.0
species: gmp c
type: SpeciesReference

CDMT01402
stoichiometry: 1.0
species: nadh c
type: SpeciesReference

MNLptspp
kinetic law: CDMT00717
product: CDMT00716
product: CDMT00715
reactant: CDMT00714
reactant: CDMT00713
fast: false
reversible: false
name: mannitol transport via PEP:Pyr PTS (periplasm)
type: Reaction

CDMT00850
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

IMPC
kinetic law: CDMT00234
product: CDMT00233
product: CDMT00232
reactant: CDMT00231
fast: false
reversible: false
name: IMP cyclohydrolase
type: Reaction

CDMT00580
stoichiometry: 1.0
species: acorn c
type: SpeciesReference

CDMT01735
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

CDMT02102
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

PRAMPC
kinetic law: CDMT02016
product: CDMT02015
reactant: CDMT02014
reactant: CDMT02013
fast: false
reversible: false
name: phosphoribosyl-AMP cyclohydrolase
type: Reaction

CDMT01891
stoichiometry: 1.0
species: adphep 45 D 44 D c
type: SpeciesReference

556458
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

phe 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: phe-L
type: Species

CDMT00056
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02072
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00317
stoichiometry: 1.0
species: pan4p c
type: SpeciesReference

CDMT01405
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00892
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

pant 45 R c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: pant-R
type: Species

CDMT01162
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

556717
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01210
stoichiometry: 1.0
species: 8aonn c
type: SpeciesReference

CDMT01629
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

CDMT00853
stoichiometry: 1.0
species: fum c
type: SpeciesReference

CDMT01950
stoichiometry: 1.0
species: pi c
type: SpeciesReference

ARGSL
kinetic law: CDMT01184
product: CDMT01183
product: CDMT01182
reactant: CDMT01181
fast: false
reversible: false
name: argininosuccinate lyase
type: Reaction

CDMT01734
stoichiometry: 1.0
species: pphn c
type: SpeciesReference

556654
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01892
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT00581
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01360
stoichiometry: 2.0
species: udcpdp c
type: SpeciesReference

CDMT00893
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556768
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

phom c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: phom
type: Species

CDMT00057
stoichiometry: 1.0
species: gua c
type: SpeciesReference

pnto 45 R c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: pnto-R
type: Species

CDMT01774
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00708
stoichiometry: 1.0
species: gdp c
type: SpeciesReference

CDMT01404
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00399
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00852
stoichiometry: 1.0
species: aicar c
type: SpeciesReference

556718
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01161
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00319
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00582
stoichiometry: 1.0
species: ac c
type: SpeciesReference

556456
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01733
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT02100
stoichiometry: 1.0
species: glc 45 D p
type: SpeciesReference

CDMT02073
stoichiometry: 2.0
species: pg EC c
type: SpeciesReference

EF cmp 40 c 41
kinetic law: CDMT00440
reactant: CDMT00438
fast: false
reversible: false
name: cmp exchange
type: Reaction

ARGSS
kinetic law: CDMT01272
name: argininosuccinate synthase
reactant: CDMT01266
product: CDMT01271
reactant: CDMT01265
product: CDMT01270
type: Reaction
product: CDMT01269
reactant: CDMT01267
fast: false
product: CDMT01268
reversible: false

CDMT01626
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00703
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01779
stoichiometry: 1.0
species: adp c
type: SpeciesReference

ADSL2r
kinetic law: CDMT00854
product: CDMT00853
product: CDMT00852
reactant: CDMT00851
fast: false
reversible: false
name: adenylosuccinate lyase
type: Reaction

CDMT00894
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00697
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

CDMT00050
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00806
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00919
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556877
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556652
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00583
stoichiometry: 1.0
species: orn c
type: SpeciesReference

CDMT01093
stoichiometry: 1.0
species: uaccg c
type: SpeciesReference

CDMT01212
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01052
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01627
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00702
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00855
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00656
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01362
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00696
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00895
stoichiometry: 1.0
species: grdp c
type: SpeciesReference

g3p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: g3p
type: Species

CDMT00051
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT00918
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01213
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

CDMT00805
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

CDMT01092
stoichiometry: 1.0
species: pi c
type: SpeciesReference

UP thmmp
kinetic law: CDMT01715
product: CDMT01714
fast: false
reversible: false
name: thmmp exchange
type: Reaction

CDMT01628
stoichiometry: 1.0
species: 6pgc c
type: SpeciesReference

CDMT01053
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00657
stoichiometry: 1.0
species: g3p c
type: SpeciesReference

CDMT01777
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00858
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00659
stoichiometry: 1.0
species: pyr c
type: SpeciesReference

CDMT00705
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT01401
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

anth c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: anth
type: Species

CDMT00052
stoichiometry: 1.0
species: prbamp c
type: SpeciesReference

DXPRIi
product: CDMT01386
reversible: false
name: 1-deoxy-D-xylulose reductoisomerase
product: CDMT01385
reactant: CDMT01384
type: Reaction
reactant: CDMT01382
fast: false
reactant: CDMT01383
kinetic law: CDMT01387

CDMT00896
stoichiometry: 1.0
species: ipdp c
type: SpeciesReference

CDMT01363
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00699
stoichiometry: 1.0
species: 26dap 45 LL c
type: SpeciesReference

CDMT01739
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01214
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00804
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01091
stoichiometry: 1.0
species: uacgam c
type: SpeciesReference

556650
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

EX dhpt 40 c 41
kinetic law: CDMT02069
product: CDMT02068
fast: false
reversible: false
name: dhpt exchange
type: Reaction

CDMT01801
stoichiometry: 1.0
species: hxan c
type: SpeciesReference

nh4 c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: nh4
type: Species

CDMT00658
stoichiometry: 1.0
species: h c
type: SpeciesReference

DHORTS
kinetic law: CDMT01649
product: CDMT01648
product: CDMT01647
reactant: CDMT01646
reactant: CDMT01645
fast: false
reversible: false
name: dihydroorotase
type: Reaction

CDMT00585
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00170
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01050
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

CDMT01400
stoichiometry: 1.0
species: accoa c
type: SpeciesReference

CDMT00704
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00857
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01625
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01778
stoichiometry: 1.0
species: dadp c
type: SpeciesReference

CDMT00698
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01001
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01364
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01199
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00897
stoichiometry: 1.0
species: frdp c
type: SpeciesReference

OMPDC
kinetic law: CDMT01537
product: CDMT01536
product: CDMT01535
reactant: CDMT01534
reactant: CDMT01533
fast: false
reversible: false
name: orotidine-5'-phosphate decarboxylase
type: Reaction

AICART
kinetic law: CDMT00154
product: CDMT00153
product: CDMT00152
reactant: CDMT00151
reactant: CDMT00150
fast: false
reversible: false
name: phosphoribosylaminoimidazolecarboxamide formyltransferase
type: Reaction

CDMT01090
stoichiometry: 1.0
species: pep c
type: SpeciesReference

CDMT01215
stoichiometry: 1.0
species: 3dhsk c
type: SpeciesReference

CDMT00916
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

CDMT01800
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

5mthf c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 5mthf
type: Species

CDMT00856
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00586
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

ORPT
kinetic law: CDMT01977
product: CDMT01976
product: CDMT01975
reactant: CDMT01974
reactant: CDMT01973
fast: false
reversible: false
name: orotate phosphoribosyltransferase
type: Reaction

NDPK6
kinetic law: CDMT01837
product: CDMT01836
product: CDMT01835
reactant: CDMT01834
reactant: CDMT01833
fast: false
reversible: false
name: nucleoside-diphosphate kinase (ATP:dUDP)
type: Reaction

CDMT01321
stoichiometry: 1.0
species: gtp c
type: SpeciesReference

CDMT00964
stoichiometry: 1.0
species: ugmda c
type: SpeciesReference

ump c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ump
type: Species

CDMT01660
stoichiometry: 5.0E-5
species: gthrd c
type: SpeciesReference

CDMT00652
stoichiometry: 1.0
species: ctp c
type: SpeciesReference

CDMT02109
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01956
stoichiometry: 5.0
species: h c
type: SpeciesReference

CDMT00139
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT02078
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

UP alaala
kinetic law: CDMT00303
product: CDMT00302
fast: false
reversible: false
name: alala exchange
type: Reaction

MECDPDH
kinetic law: CDMT00193
product: CDMT00192
product: CDMT00191
reactant: CDMT00190
reactant: CDMT00189
fast: false
reversible: false
name: "2C-methyl-D-erythritol 2,4 cyclodiphosphate dehydratase"
type: Reaction

556873
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00915
stoichiometry: 1.0
species: 2ahbut c
type: SpeciesReference

CDMT01365
stoichiometry: 1.0
species: dump c
type: SpeciesReference

UP nac
kinetic law: CDMT01075
product: CDMT01074
fast: false
reversible: false
name: nac exchange
type: Reaction

EX glyc EC 40 c 41
kinetic law: CDMT01549
reactant: CDMT01547
fast: false
reversible: false
name: glyc exchange
type: Reaction

CDMT00390
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00898
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT01097
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01002
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00245
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01957
stoichiometry: 3.0
species: nadph c
type: SpeciesReference

2ahbut c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 2ahbut
type: Species

CDMT02034
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01622
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

CDMT00311
stoichiometry: 1.0
species: h c
type: SpeciesReference

ala 45 B c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ala-B
type: Species

CDMT01556
stoichiometry: 1.0
species: h c
type: SpeciesReference

dcdp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dcdp
type: Species

CDMT00963
stoichiometry: 1.0
species: udcpp c
type: SpeciesReference

NDPK5
kinetic law: CDMT01861
product: CDMT01860
product: CDMT01859
reactant: CDMT01858
reactant: CDMT01857
fast: false
reversible: false
name: nucleoside-diphosphate kinase (ATP:dGDP)
type: Reaction

CDMT01955
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01661
stoichiometry: 5.0E-5
species: thmpp c
type: SpeciesReference

CDMT00350
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556762
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02079
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00914
stoichiometry: 1.0
species: pyr c
type: SpeciesReference

CDMT01322
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

556872
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01096
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

rhcys c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: rhcys
type: Species

556571
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556833
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01229
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CYSS
product: CDMT02108
type: Reaction
fast: false
product: CDMT02107
reactant: CDMT02106
product: CDMT02109
kinetic law: CDMT02110
reactant: CDMT02105
name: cysteine synthase
reversible: false

CDMT01003
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02035
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00244
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01366
stoichiometry: 1.0
species: mlthf c
type: SpeciesReference

CDMT01555
stoichiometry: 1.0
species: amp c
type: SpeciesReference

CDMT01623
stoichiometry: 1.0
species: pi c
type: SpeciesReference

556834
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00351
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01662
stoichiometry: 5.0E-5
species: sheme c
type: SpeciesReference

NDPK8
kinetic law: CDMT01781
product: CDMT01780
product: CDMT01779
reactant: CDMT01778
reactant: CDMT01777
fast: false
reversible: false
name: nucleoside-diphosphate kinase (ATP:dADP)
type: Reaction

CDMT00654
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT02107
stoichiometry: 1.0
species: ac c
type: SpeciesReference

CDMT00966
stoichiometry: 1.0
species: ump c
type: SpeciesReference

CDMT00913
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01323
stoichiometry: 1.0
species: so4 c
type: SpeciesReference

556875
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00808
stoichiometry: 1.0
species: pheme c
type: SpeciesReference

4pasp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 4pasp
type: Species

CDMT00392
stoichiometry: 1.0
species: ahcys c
type: SpeciesReference

CDMT01095
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01367
stoichiometry: 1.0
species: dhf c
type: SpeciesReference

2ippm c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 2ippm
type: Species

CDMT02036
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01620
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

CDMT01004
stoichiometry: 1.0
species: 3psme c
type: SpeciesReference

CDMT00247
stoichiometry: 1.0
species: met 45 L c
type: SpeciesReference

hom 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: hom-L
type: Species

CDMT01959
stoichiometry: 3.0
species: h2o c
type: SpeciesReference

CDMT02108
stoichiometry: 1.0
species: cys 45 L c
type: SpeciesReference

NDPK7
kinetic law: CDMT01845
product: CDMT01844
product: CDMT01843
reactant: CDMT01842
reactant: CDMT01841
fast: false
reversible: false
name: nucleoside-diphosphate kinase (ATP:dCDP)
type: Reaction

CDMT00352
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00965
stoichiometry: 1.0
species: uagmda c
type: SpeciesReference

CDMT00655
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01324
stoichiometry: 1.0
species: aps c
type: SpeciesReference

CDMT00912
stoichiometry: 1.0
species: 2obut c
type: SpeciesReference

aspsa c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: aspsa
type: Species

UP pheme
kinetic law: CDMT00809
product: CDMT00808
fast: false
reversible: false
name: pheme exchange
type: Reaction

556760
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01663
stoichiometry: 5.0E-5
species: btn c
type: SpeciesReference

dhor 45 S c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dhor-S
type: Species

CDMT00911
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00391
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01368
stoichiometry: 1.0
species: dtmp c
type: SpeciesReference

UAAGDS
kinetic law: CDMT01486
product: CDMT01484
reactant: CDMT01479
product: CDMT01482
product: CDMT01485
name: "UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase"
product: CDMT01483
reactant: CDMT01480
type: Reaction
reactant: CDMT01481
reversible: false
fast: false

CDMT01005
stoichiometry: 1.0
species: chor c
type: SpeciesReference

CDMT01621
stoichiometry: 1.0
species: aspsa c
type: SpeciesReference

CDMT00310
stoichiometry: 1.0
species: fmn c
type: SpeciesReference

CDMT00246
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01557
stoichiometry: 1.0
species: prpp c
type: SpeciesReference

CDMT01958
stoichiometry: 1.0
species: so3 c
type: SpeciesReference

CDMT01732
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556765
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

HISTP
kinetic law: CDMT01344
product: CDMT01343
product: CDMT01342
reactant: CDMT01341
reactant: CDMT01340
fast: false
reversible: false
name: histidinol-phosphatase
type: Reaction

CDMT01446
stoichiometry: 1.0
species: 3ig3p c
type: SpeciesReference

CDMT02074
stoichiometry: 1.0
species: clpn EC c
type: SpeciesReference

CDMT02105
stoichiometry: 1.0
species: acser c
type: SpeciesReference

3dhsk c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 3dhsk
type: Species

CDMT00099
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT00960
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00353
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT01408
stoichiometry: 1.0
species: methf c
type: SpeciesReference

ADSS
fast: false
product: CDMT01084
kinetic law: CDMT01086
reactant: CDMT01080
product: CDMT01085
reactant: CDMT01081
reactant: CDMT01079
reversible: false
product: CDMT01083
name: adenylosuccinate synthase
product: CDMT01082
type: Reaction

CDMT01006
stoichiometry: 1.0
species: pi c
type: SpeciesReference

NDPK2
kinetic law: CDMT01813
product: CDMT01812
product: CDMT01811
reactant: CDMT01810
reactant: CDMT01809
fast: false
reversible: false
name: nucleoside-diphosphate kinase (ATP:UDP)
type: Reaction

CDMT00058
stoichiometry: 1.0
species: prpp c
type: SpeciesReference

SULR
product: CDMT01960
product: CDMT01961
reactant: CDMT01958
name: sulfite reductase (NADPH2)
type: Reaction
reactant: CDMT01956
reversible: false
reactant: CDMT01957
product: CDMT01959
fast: false
kinetic law: CDMT01962

CDMT00315
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00910
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00241
stoichiometry: 2.0
species: h2o c
type: SpeciesReference

CDMT02038
stoichiometry: 1.0
species: gsn c
type: SpeciesReference

CDMT00394
stoichiometry: 1.0
species: ade c
type: SpeciesReference

CDMT01447
stoichiometry: 1.0
species: ser 45 L c
type: SpeciesReference

CDMT00354
stoichiometry: 1.0
species: h c
type: SpeciesReference

AMAOTr
kinetic law: CDMT01614
product: CDMT01613
product: CDMT01612
reactant: CDMT01611
reactant: CDMT01610
fast: false
reversible: false
name: adenosylmethionine-8-amino-7-oxononanoate transaminase
type: Reaction

CDMT01731
units: mmol per gDW per hr
value: 100.0
type: LocalParameter

556766
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02075
stoichiometry: 1.0
species: glyc c
type: SpeciesReference

CDMT01951
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

skm5p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: skm5p
type: Species

CDMT00098
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT02106
stoichiometry: 1.0
species: h2s c
type: SpeciesReference

CDMT01407
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

556607
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01559
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556575
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01406
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00059
stoichiometry: 1.0
species: gmp c
type: SpeciesReference

NDPK1
kinetic law: CDMT01829
product: CDMT01828
product: CDMT01827
reactant: CDMT01826
reactant: CDMT01825
fast: false
reversible: false
name: nucleoside-diphosphate kinase (ATP:GDP)
type: Reaction

CDMT00393
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT00240
stoichiometry: 1.0
species: dmlz c
type: SpeciesReference

CDMT01730
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00650
stoichiometry: 1.0
species: cdp c
type: SpeciesReference

556763
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

RPI
kinetic law: CDMT00372
product: CDMT00371
reactant: CDMT00370
fast: false
reversible: false
name: ribose-5-phosphate isomerase
type: Reaction

CDMT01448
stoichiometry: 1.0
species: g3p c
type: SpeciesReference

CDMT00355
stoichiometry: 1.0
species: pan4p c
type: SpeciesReference

CDMT01954
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00962
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01271
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT02103
units: mmol per gDW per hr
value: 100.0
type: LocalParameter

NDPK4
kinetic law: CDMT01853
product: CDMT01852
product: CDMT01851
reactant: CDMT01850
reactant: CDMT01849
fast: false
reversible: false
name: nucleoside-diphosphate kinase (ATP:dTDP)
type: Reaction

CDMT01008
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

trp 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: trp-L
type: Species

556699
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00313
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

ENO
kinetic law: CDMT00876
product: CDMT00875
product: CDMT00874
reactant: CDMT00873
fast: false
reversible: false
name: enolase
type: Reaction

556830
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01099
stoichiometry: 1.0
species: h c
type: SpeciesReference

556658
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556870
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02077
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00356
stoichiometry: 1.0
species: dpcoa c
type: SpeciesReference

CDMT01449
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

acorn c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: acorn
type: Species

CDMT01270
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00961
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556609
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01409
stoichiometry: 1.0
species: 10fthf c
type: SpeciesReference

CDMT01953
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

ANS
reactant: CDMT01022
name: anthranilate synthase
kinetic law: CDMT01028
fast: false
product: CDMT01026
type: Reaction
reactant: CDMT01023
reversible: false
product: CDMT01025
product: CDMT01027
product: CDMT01024

CDMT00651
stoichiometry: 1.0
species: adp c
type: SpeciesReference

NDPK3
kinetic law: CDMT00653
product: CDMT00652
product: CDMT00651
reactant: CDMT00650
reactant: CDMT00649
fast: false
reversible: false
name: nucleoside-diphosphate kinase (ATP:CDP)
type: Reaction

CDMT02104
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

succ c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: succ
type: Species

CDMT01320
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00314
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01009
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556573
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

KARA2
kinetic law: CDMT00773
type: Reaction
name: ketol-acid reductoisomerase (2-Acetolactate)
product: CDMT00772
fast: false
reactant: CDMT00770
reactant: CDMT00768
product: CDMT00771
reactant: CDMT00769
reversible: false

556831
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

thdp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: thdp
type: Species

CDMT00479
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00242
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT00395
stoichiometry: 1.0
species: rhcys c
type: SpeciesReference

EX nh4 40 c 41
kinetic law: CDMT00378
product: CDMT00377
fast: false
reversible: false
name: nh4 exchange
type: Reaction

dttp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dttp
type: Species

EF cys 45 L 40 c 41
kinetic law: CDMT00036
reactant: CDMT00034
fast: false
reversible: false
name: cys-L exchange
type: Reaction

CDMT01098
stoichiometry: 1.0
species: atp c
type: SpeciesReference

TEST AKGDH
reactant: CDMT00133
product: CDMT00136
fast: false
kinetic law: CDMT00137
product: CDMT00134
reactant: CDMT00132
name: 2-Oxogluterate dehydrogenase
product: CDMT00135
reversible: false
reactant: CDMT00131
type: Reaction

CDMT01221
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00477
stoichiometry: 1.0
species: pyr c
type: SpeciesReference

CDMT01850
stoichiometry: 1.0
species: dtdp c
type: SpeciesReference

556579
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556696
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

THDPS
kinetic law: CDMT00495
product: CDMT00493
type: Reaction
reactant: CDMT00490
reactant: CDMT00491
name: tetrahydrodipicolinate succinylase
product: CDMT00494
reactant: CDMT00492
reversible: false
fast: false

HISTD
product: CDMT01575
name: histidinol dehydrogenase
reactant: CDMT01571
product: CDMT01576
fast: false
reactant: CDMT01572
product: CDMT01574
type: Reaction
reversible: false
kinetic law: CDMT01577
reactant: CDMT01573

DDPA
kinetic law: CDMT00115
name: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase
reversible: false
fast: false
reactant: CDMT00112
type: Reaction
reactant: CDMT00111
product: CDMT00113
product: CDMT00114
reactant: CDMT00110

CDMT01260
stoichiometry: 1.0
species: uama c
type: SpeciesReference

CDMT00435
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556615
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00132
stoichiometry: 1.0
species: coa c
type: SpeciesReference

CDMT01669
stoichiometry: 0.013297
species: dctp c
type: SpeciesReference

CDMT00759
stoichiometry: 1.0
species: alac 45 S c
type: SpeciesReference

CDMT01443
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

dscl c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dscl
type: Species

uagmda c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: uagmda
type: Species

CDMT00476
stoichiometry: 1.0
species: g6p c
type: SpeciesReference

CDMT01851
stoichiometry: 1.0
species: adp c
type: SpeciesReference

UP ptrc
kinetic law: CDMT00923
product: CDMT00922
fast: false
reversible: false
name: ptrc exchange
type: Reaction

CDMT00757
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00540
stoichiometry: 1.0
species: asp 45 L c
type: SpeciesReference

uamag c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: uamag
type: Species

556498
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

mnl1p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: mnl1p
type: Species

556697
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

gmhep1p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: gmhep1p
type: Species

CDMT00131
stoichiometry: 1.0
species: akg c
type: SpeciesReference

556828
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00758
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01668
stoichiometry: 0.0276
species: murein5p5p p
type: SpeciesReference

CDMT01510
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

PAPSR
product: CDMT00085
product: CDMT00084
type: Reaction
reactant: CDMT00083
reactant: CDMT00082
fast: false
product: CDMT00087
name: phosphoadenylyl-sulfate reductase (thioredoxin)
product: CDMT00086
reversible: false
kinetic law: CDMT00088

13dpg c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 13dpg
type: Species

CDMT00357
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT00168
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01329
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00541
stoichiometry: 1.0
species: cbp c
type: SpeciesReference

CDMT01852
stoichiometry: 1.0
species: dttp c
type: SpeciesReference

CDMT01110
stoichiometry: 1.0
species: pi c
type: SpeciesReference

556538
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

sl26da c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: sl26da
type: Species

CDMT00475
stoichiometry: 1.0
species: pep c
type: SpeciesReference

556694
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

EF rhcys 40 c 41
kinetic law: CDMT00454
reactant: CDMT00452
fast: false
reversible: false
name: rhcys exchange
type: Reaction

prlp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: prlp
type: Species

CDMT01223
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02041
units: mmol per gDW per hr
value: 100.0
type: LocalParameter

cdp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: cdp
type: Species

556577
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556617
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

TRPS1
reactant: CDMT01447
type: Reaction
name: tryptophan synthase (indoleglycerol phosphate)
reactant: CDMT01446
product: CDMT01449
product: CDMT01450
product: CDMT01448
reversible: false
fast: false
kinetic law: CDMT01451

CDMT00437
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01262
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01590
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00169
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

SDPTA
kinetic law: CDMT02000
product: CDMT01999
product: CDMT01998
reactant: CDMT01997
reactant: CDMT01996
fast: false
reversible: false
name: succinyldiaminopimelate transaminase
type: Reaction

CDMT00134
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

CDMT01445
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

h2mb4p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: h2mb4p
type: Species

time
unit: CDMT02142
name: time
type: SBMLUnitsDef

CDMT01550
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

amob c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: amob
type: Species

CDMT01222
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00542
stoichiometry: 1.0
species: cbasp c
type: SpeciesReference

556496
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02040
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00474
stoichiometry: 1.0
species: glc 45 D p
type: SpeciesReference

CDMT00133
stoichiometry: 1.0
species: nad c
type: SpeciesReference

CDMT01263
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00436
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01444
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00359
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

PMDPHT
kinetic law: CDMT00021
product: CDMT00020
product: CDMT00019
reactant: CDMT00018
reactant: CDMT00017
fast: false
reversible: false
name: pyrimidine phosphatase
type: Reaction

CDMT00473
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00956
stoichiometry: 1.0
species: thmmp c
type: SpeciesReference

CDMT02043
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01225
stoichiometry: 1.0
species: atp c
type: SpeciesReference

556611
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01948
stoichiometry: 1.0
species: met 45 L c
type: SpeciesReference

556692
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00754
stoichiometry: 1.0
species: nh4 c
type: SpeciesReference

CDMT01551
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00543
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00136
stoichiometry: 1.0
species: succoa c
type: SpeciesReference

CDMT01909
stoichiometry: 1.0
species: q8h2 c
type: SpeciesReference

CDMT01159
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01513
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01665
stoichiometry: 0.203
species: gtp c
type: SpeciesReference

CDMT01326
stoichiometry: 1.0
species: pi c
type: SpeciesReference

leu 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: leu-L
type: Species

CDMT01592
stoichiometry: 1.0
species: glu 45 L c
type: SpeciesReference

UDCPDP
reactant: CDMT01373
product: CDMT01375
reactant: CDMT01374
product: CDMT01376
fast: false
reversible: false
name: undecaprenyl-diphosphatase
kinetic law: CDMT01378
product: CDMT01377
type: Reaction

556825
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

HSDy
name: homoserine dehydrogenase (NADPH)
product: CDMT01932
kinetic law: CDMT01934
reversible: false
fast: false
product: CDMT01933
reactant: CDMT01929
type: Reaction
reactant: CDMT01931
reactant: CDMT01930

CDMT00955
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT01264
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00431
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01224
stoichiometry: 1.0
species: asp 45 L c
type: SpeciesReference

CDMT00472
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT02042
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00957
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT01949
stoichiometry: 1.0
species: amet c
type: SpeciesReference

dtmp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dtmp
type: Species

CDMT00753
stoichiometry: 1.0
species: dutp c
type: SpeciesReference

CDMT00544
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01552
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00209
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01908
stoichiometry: 1.0
species: orot c
type: SpeciesReference

CDMT00430
stoichiometry: 1.0
species: amp c
type: SpeciesReference

CDMT01325
stoichiometry: 1.0
species: gdp c
type: SpeciesReference

CDMT00135
stoichiometry: 1.0
species: nadh c
type: SpeciesReference

CDMT01514
stoichiometry: 1.0
species: gua c
type: SpeciesReference

CDMT01664
stoichiometry: 5.0E-5
species: hemeO c
type: SpeciesReference

CDMT01591
stoichiometry: 1.0
species: dhpt c
type: SpeciesReference

556824
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

ser 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ser-L
type: Species

CDMT01265
stoichiometry: 1.0
species: asp 45 L c
type: SpeciesReference

CDMT01227
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT02045
stoichiometry: 1.0
species: amp c
type: SpeciesReference

CDMT01553
stoichiometry: 1.0
species: atp c
type: SpeciesReference

556613
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

FBA
kinetic law: CDMT01529
product: CDMT01528
product: CDMT01527
reactant: CDMT01526
fast: false
reversible: false
name: fructose-bisphosphate aldolase
type: Reaction

CDMT00471
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00958
stoichiometry: 1.0
species: thmpp c
type: SpeciesReference

CDMT00756
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

chor c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: chor
type: Species

CDMT00138
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01667
stoichiometry: 0.136
species: utp c
type: SpeciesReference

CDMT01511
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

UPPER BOUND
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01594
stoichiometry: 1.0
species: dhf c
type: SpeciesReference

556827
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01266
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00433
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

556428
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

dad 45 2 c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dad-2
type: Species

CDMT02044
stoichiometry: 1.0
species: pap c
type: SpeciesReference

MODEL1012300000
species: histd c
reaction: GLCptspp
species: akg c
species: 5aprbu c
species: imacp c
reaction: RNDR3
reaction: DUTPDP
reaction: UP gln 45 L 40 c 41
species: ACP c
species: thmpp c
reaction: ASAD
species: pg EC c
reaction: CHORM
reaction: EF 5mtr 40 c 41
species: fum c
reaction: SHKK
reaction: PFK
species: chor c
reaction: EF phe 45 L 40 c 41
species: leu 45 L c
species: gly c
species: hisp c
reaction: RBFSa
reaction: NADS1
reaction: NADP dummy
species: dhf c
reaction: DHAD1
reaction: HCO3E
reaction: DAPE
reaction: GLUR
reaction: METS
species: atp c
species: cmp c
species: ade c
species: co2 c
reaction: DBTS
reaction: NNATr
reaction: DTMPK
reaction: SDPDS
notes: This model is from the article: Genetic and metabolic determinants of nutritional phenotype in an insect-bacterial symbiosis. MacDonald SJ, Thomas GH, Douglas AE. Mol Ecol. 2011 May;20(10):2073-84. 21392141 , Abstract: The pervasive influence of resident microorganisms on the phenotype of their hosts is exemplified by the intracellular bacterium Buchnera aphidicola, which provides its aphid partner with essential amino acids (EAAs). We investigated variation in the dietary requirement for EAAs among four pea aphid (Acyrthosiphon pisum) clones. Buchnera-derived nitrogen contributed to the synthesis of all EAAs for which aphid clones required a dietary supply, and to none of the EAAs for which all four clones had no dietary requirement, suggesting that low total dietary nitrogen may select for reduced synthesis of certain EAAs in some aphid clones. The sequenced Buchnera genomes showed that the EAA nutritional phenotype (i.e. the profile of dietary EAAs required by the aphid) cannot be attributed to sequence variation of Buchnera genes coding EAA biosynthetic enzymes. Metabolic modelling by flux balance analysis demonstrated that EAA output from Buchnera can be determined precisely by the flux of host metabolic precursors to Buchnera. Specifically, the four EAA nutritional phenotypes could be reproduced by metabolic models with unique profiles of host inputs, dominated by variation in supply of aspartate, homocysteine and glutamate. This suggests that the nutritional phenotype of the symbiosis is determined principally by host metabolism and transporter genes that regulate nutrient supply to Buchnera. Intraspecific variation in the nutritional phenotype of symbioses is expected to mediate partitioning of plant resources among aphid genotypes, potentially promoting the genetic subdivision of aphid populations. In this way, microbial symbioses may play an important role in the evolutionary diversification of phytophagous insects. This model originates from BioModels Dat…
reaction: NDPK6
species: nadph c
species: 3mob c
reaction: CHORS
species: dump c
species: methf c
species: q8h2 c
reaction: UP asp 45 L 40 c 41
reaction: ACPS1
reaction: DPCOAK
reaction: OMPDC
species: 2dhp c
reaction: GMPR
species: hcys 45 L c
reaction: FBA
reaction: EF met 45 L 40 c 41
reaction: PGM
species: o2 c
species: fmnh2 c
species: dtmp c
reaction: TRPS1
reaction: OMCDC
reaction: UP uppg3
species: dttp c
reaction: PUNP6
type: SBMLModel
species: utp c
reaction: DAPDC
species: ru5p 45 D c
reaction: SHK3Dr
species: spmd c
species: orot5p c
reaction: MTAN
species: gthrd c
species: asp 45 L c
reaction: ANPRT
species: acorn c
species: acser c
reaction: PUNP1
reaction: TPI

CDMT01226
stoichiometry: 1.0
species: 4pasp c
type: SpeciesReference

CDMT01554
stoichiometry: 1.0
species: r5p c
type: SpeciesReference

coa c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: coa
type: Species

556691
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00546
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01327
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT01666
stoichiometry: 0.126
species: ctp c
type: SpeciesReference

CDMT01267
stoichiometry: 1.0
species: citr 45 L c
type: SpeciesReference

CDMT01512
stoichiometry: 1.0
species: gsn c
type: SpeciesReference

3pg c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 3pg
type: Species

CDMT00432
stoichiometry: 1.0
species: nad c
type: SpeciesReference

CDMT01440
stoichiometry: 1.0
species: lys 45 L c
type: SpeciesReference

CDMT01593
stoichiometry: 1.0
species: adp c
type: SpeciesReference

ACOTA
kinetic law: CDMT00220
product: CDMT00219
product: CDMT00218
reactant: CDMT00217
reactant: CDMT00216
fast: false
reversible: false
name: acetylornithine transaminase
type: Reaction

556450
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01899
stoichiometry: 1.0
species: citr 45 L c
type: SpeciesReference

CDMT01045
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

2pg c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 2pg
type: Species

CDMT01155
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT00588
stoichiometry: 1.0
species: 2dda7p c
type: SpeciesReference

CDMT01596
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01704
stoichiometry: 1.0
species: frdp c
type: SpeciesReference

dcamp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dcamp
type: Species

CDMT01268
stoichiometry: 1.0
species: amp c
type: SpeciesReference

pyr c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: pyr
type: Species

CDMT00205
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01859
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT01905
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01217
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

556532
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00547
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00750
stoichiometry: 1.0
species: dctp c
type: SpeciesReference

PFK
product: CDMT02006
reactant: CDMT02004
product: CDMT02008
name: phosphofructokinase
reversible: false
product: CDMT02007
type: Reaction
reactant: CDMT02005
kinetic law: CDMT02009
fast: false

nadp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: nadp
type: Species

CDMT01518
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01116
stoichiometry: 1.0
species: ump c
type: SpeciesReference

556426
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556720
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01703
units: mmol per gDW per hr
value: 1.0
type: LocalParameter

CDMT00692
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

imp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: imp
type: Species

CDMT01044
units: mmol per gDW per hr
value: 50.0
type: LocalParameter

GK1
kinetic law: CDMT00709
product: CDMT00708
product: CDMT00707
reactant: CDMT00706
reactant: CDMT00705
fast: false
reversible: false
name: guanylate kinase (GMP:ATP)
type: Reaction

CDMT01898
stoichiometry: 1.0
species: orn c
type: SpeciesReference

CBPS
product: CDMT01302
reactant: CDMT01301
product: CDMT01303
reactant: CDMT01300
type: Reaction
name: carbamoyl-phosphate synthase (glutamine-hydrolysing)
reversible: false
product: CDMT01304
product: CDMT01305
reactant: CDMT01298
product: CDMT01306
reactant: CDMT01299
kinetic law: CDMT01307
fast: false

volume
unit: CDMT02139
name: volume
type: SBMLUnitsDef

CDMT01595
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01705
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT00710
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00587
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01156
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00204
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01269
stoichiometry: 1.0
species: argsuc c
type: SpeciesReference

PIt2rpp
kinetic law: CDMT01111
product: CDMT01110
product: CDMT01109
reactant: CDMT01108
reactant: CDMT01107
fast: false
reversible: false
name: phosphate reversible transport via symport (periplasm)
type: Reaction

CDMT01216
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00549
stoichiometry: 1.0
species: s7p c
type: SpeciesReference

CDMT01904
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00548
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01519
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556490
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00848
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01115
stoichiometry: 1.0
species: atp c
type: SpeciesReference

DAPDC
kinetic law: CDMT00462
product: CDMT00461
product: CDMT00460
reactant: CDMT00459
reactant: CDMT00458
fast: false
reversible: false
name: diaminopimelate decarboxylase
type: Reaction

alaala c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: alaala
type: Species

CDMT00711
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00161
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

ametam c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ametam
type: Species

hcys 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: hcys-L
type: Species

GF6PTA
kinetic law: CDMT02024
product: CDMT02023
product: CDMT02022
reactant: CDMT02021
reactant: CDMT02020
fast: false
reversible: false
name: glutamine-fructose-6-phosphate transaminase
type: Reaction

CDMT01043
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01515
stoichiometry: 1.0
species: r1p c
type: SpeciesReference

CDMT01219
stoichiometry: 1.0
species: skm c
type: SpeciesReference

556530
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00207
stoichiometry: 1.0
species: 2me4p c
type: SpeciesReference

CDMT01907
stoichiometry: 1.0
species: q8 c
type: SpeciesReference

CDMT01157
stoichiometry: 1.0
species: paps c
type: SpeciesReference

CDMT01598
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

dhpt c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dhpt
type: Species

CDMT00208
stoichiometry: 1.0
species: ctp c
type: SpeciesReference

CDMT00752
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT00694
stoichiometry: 1.0
species: ala 45 B c
type: SpeciesReference

CDMT01118
stoichiometry: 1.0
species: udp c
type: SpeciesReference

TKT2
kinetic law: CDMT00645
product: CDMT00644
product: CDMT00643
reactant: CDMT00642
reactant: CDMT00641
fast: false
reversible: false
name: transketolase
type: Reaction

CDMT01701
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

pi p
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: p
name: pi
type: Species

ac c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ac
type: Species

556424
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00849
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00712
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

so4 c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: so4
type: Species

CDMT00162
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

3mop c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 3mop
type: Species

CDMT00589
stoichiometry: 1.0
species: 3dhq c
type: SpeciesReference

3c4mop c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 3c4mop
type: Species

CDMT01218
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

5mtr c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 5mtr
type: Species

DPCOAK
reversible: false
name: dephospho-CoA kinase
reactant: CDMT01920
kinetic law: CDMT01925
reactant: CDMT01921
type: Reaction
product: CDMT01922
fast: false
product: CDMT01923
product: CDMT01924

CDMT01906
stoichiometry: 1.0
species: dhor 45 S c
type: SpeciesReference

CDMT00206
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

SHCHD2
type: Reaction
product: CDMT02030
fast: false
reactant: CDMT02028
name: sirohydrochlorin dehydrogenase (NAD)
product: CDMT02032
kinetic law: CDMT02033
product: CDMT02031
reversible: false
reactant: CDMT02029

trdox c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: trdox
type: Species

CDMT00060
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT01517
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00751
stoichiometry: 1.0
species: h c
type: SpeciesReference

hxan c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: hxan
type: Species

CDMT01117
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT01702
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556721
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

TKT1
kinetic law: CDMT00470
product: CDMT00469
product: CDMT00468
reactant: CDMT00467
reactant: CDMT00466
fast: false
reversible: false
name: transketolase
type: Reaction

556536
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

acser c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: acser
type: Species

MEPCT
reactant: CDMT00207
reversible: false
reactant: CDMT00208
name: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
product: CDMT00211
reactant: CDMT00209
type: Reaction
kinetic law: CDMT00212
fast: false
product: CDMT00210

CDMT01049
stoichiometry: 1.0
species: h c
type: SpeciesReference

556454
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

GMPR
reversible: false
product: CDMT00411
reactant: CDMT00406
type: Reaction
product: CDMT00409
name: GMP reductase
reactant: CDMT00407
fast: false
kinetic law: CDMT00412
product: CDMT00410
reactant: CDMT00408

CDMT00201
stoichiometry: 1.0
species: ipdp c
type: SpeciesReference

CDMT01151
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

h c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: h
type: Species

CDMT00163
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

DMPPS
product: CDMT00989
reversible: false
product: CDMT00988
name: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (dmpp)
reactant: CDMT00985
kinetic law: CDMT00991
fast: false
reactant: CDMT00986
product: CDMT00990
reactant: CDMT00987
type: Reaction

CDMT01895
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556724
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556422
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01854
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01900
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01772
stoichiometry: 1.0
species: ala 45 L c
type: SpeciesReference

CDMT01112
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00601
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

dmpp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dmpp
type: Species

CDMT01599
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00200
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01048
stoichiometry: 1.0
species: adp c
type: SpeciesReference

MTHFR2
reactant: CDMT01125
name: "5,10-methylenetetrahydrofolate reductase (NADH)"
product: CDMT01127
product: CDMT01126
type: Reaction
fast: false
kinetic law: CDMT01128
reactant: CDMT01124
reactant: CDMT01123
reversible: false

amp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: amp
type: Species

CDMT00438
stoichiometry: 1.0
species: cmp c
type: SpeciesReference

CDMT00164
stoichiometry: 1.0
species: 2p4c2me c
type: SpeciesReference

CDMT01152
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01894
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556723
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

IPMD
reactant: CDMT00026
type: Reaction
name: 3-isopropylmalate dehydrogenase
product: CDMT00029
kinetic law: CDMT00030
reactant: CDMT00025
product: CDMT00028
reversible: false
product: CDMT00027
fast: false

556494
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01855
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

orot c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: orot
type: Species

dgsn c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dgsn
type: Species

CDMT01047
stoichiometry: 1.0
species: nad c
type: SpeciesReference

556452
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01903
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

556534
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00604
stoichiometry: 1.0
species: accoa c
type: SpeciesReference

556726
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

SPMS
type: Reaction
name: spermidine synthase
fast: false
product: CDMT00815
reversible: false
product: CDMT00816
kinetic law: CDMT00818
reactant: CDMT00813
product: CDMT00817
reactant: CDMT00814

CDMT00130
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01153
stoichiometry: 1.0
species: aps c
type: SpeciesReference

CDMT01897
stoichiometry: 1.0
species: cbp c
type: SpeciesReference

CDMT00165
stoichiometry: 1.0
species: 2mecdp c
type: SpeciesReference

dudp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dudp
type: Species

CDMT00690
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01114
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00603
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

NAMNPP
name: nicotinic acid mononucleotide pyrophosphorylase
reactant: CDMT00099
reactant: CDMT00098
reactant: CDMT00100
reactant: CDMT00101
fast: false
kinetic law: CDMT00106
type: Reaction
product: CDMT00105
reversible: false
product: CDMT00104
product: CDMT00102
product: CDMT00103

gtp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: gtp
type: Species

MPTG
kinetic law: CDMT01361
product: CDMT01360
product: CDMT01359
product: CDMT01358
reactant: CDMT01357
fast: false
reversible: false
name: murein polymerizing transglycosylase
type: Reaction

f6p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: f6p
type: Species

CDMT01770
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01856
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01858
stoichiometry: 1.0
species: dgdp c
type: SpeciesReference

CDMT00202
stoichiometry: 1.0
species: nad c
type: SpeciesReference

CDMT01154
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT01896
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

NNATr
reactant: CDMT01099
kinetic law: CDMT01103
reactant: CDMT01098
name: nicotinate-nucleotide adenylyltransferase
type: Reaction
fast: false
product: CDMT01102
reversible: false
reactant: CDMT01100
product: CDMT01101

CDMT00166
stoichiometry: 1.0
species: cmp c
type: SpeciesReference

CDMT01046
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00691
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01113
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00602
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556492
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01857
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT01901
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT02005
stoichiometry: 1.0
species: f6p c
type: SpeciesReference

CDMT00230
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

PRATPP
product: CDMT00052
fast: false
product: CDMT00050
kinetic law: CDMT00053
reactant: CDMT00049
reversible: false
name: phosphoribosyl-ATP pyrophosphatase
product: CDMT00051
type: Reaction
reactant: CDMT00048

23dhmp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 23dhmp
type: Species

CDMT00775
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00821
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00182
stoichiometry: 1.0
species: adp c
type: SpeciesReference

UP ser 45 L 40 c 41
kinetic law: CDMT00869
product: CDMT00868
fast: false
reversible: false
name: ser-L exchange
type: Reaction

CDMT00860
stoichiometry: 1.0
species: trdox c
type: SpeciesReference

556867
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01188
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00271
units: mmol per gDW per hr
value: 100.0
type: LocalParameter

CDMT01375
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01488
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01437
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01109
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01838
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01765
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT01087
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

din c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: din
type: Species

CDMT02004
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00231
stoichiometry: 1.0
species: fprica c
type: SpeciesReference

glu 45 D c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: glu-D
type: Species

CDMT00181
stoichiometry: 1.0
species: hom 45 L c
type: SpeciesReference

CDMT00776
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00820
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01725
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00550
stoichiometry: 1.0
species: gmhep7p c
type: SpeciesReference

CDMT00928
stoichiometry: 1.0
species: 2obut c
type: SpeciesReference

CDMT00861
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

dann c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dann
type: Species

CDMT00270
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01376
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01187
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01726
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01766
stoichiometry: 2.0
species: adp c
type: SpeciesReference

CDMT01489
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01037
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

EF amob 40 c 41
kinetic law: CDMT01797
reactant: CDMT01795
fast: false
reversible: false
name: amob efflux
type: Reaction

CDMT01835
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT01088
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00018
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

556865
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02003
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CTPS2
product: CDMT01196
reactant: CDMT01190
product: CDMT01193
reactant: CDMT01191
product: CDMT01192
reactant: CDMT01188
reactant: CDMT01189
product: CDMT01195
name: CTP synthase (glutamine)
reversible: false
type: Reaction
kinetic law: CDMT01197
product: CDMT01194
fast: false

btn c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: btn
type: Species

CDMT01373
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01034
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01836
stoichiometry: 1.0
species: dutp c
type: SpeciesReference

CDMT01107
stoichiometry: 1.0
species: h p
type: SpeciesReference

CDMT00180
stoichiometry: 1.0
species: atp c
type: SpeciesReference

gln 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: gln-L
type: Species

CDMT01435
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

GUAPRT
kinetic law: CDMT00061
product: CDMT00060
product: CDMT00059
reactant: CDMT00058
reactant: CDMT00057
fast: false
reversible: false
name: guanine phosphoribosyltransferase
type: Reaction

EF for 40 c 41
kinetic law: CDMT00160
reactant: CDMT00158
fast: false
reversible: false
name: for efflux
type: Reaction

CDMT00669
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

HCO3E
kinetic law: CDMT01036
product: CDMT01035
product: CDMT01034
reactant: CDMT01033
reactant: CDMT01032
fast: false
reversible: false
name: HCO3 equilibration reaction
type: Reaction

CDMT00774
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01834
stoichiometry: 1.0
species: dudp c
type: SpeciesReference

DXPS
reactant: CDMT00658
product: CDMT00661
reversible: false
product: CDMT00660
type: Reaction
name: 1-deoxy-D-xylulose 5-phosphate synthase
reactant: CDMT00657
kinetic law: CDMT00662
reactant: CDMT00659
fast: false

CDMT01089
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556641
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556864
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00019
stoichiometry: 1.0
species: 4r5au c
type: SpeciesReference

CDMT02002
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01728
stoichiometry: 1.0
species: gln 45 L c
type: SpeciesReference

CDMT01189
stoichiometry: 1.0
species: gln 45 L c
type: SpeciesReference

CDMT01374
stoichiometry: 1.0
species: udcpdp c
type: SpeciesReference

MOHMT
product: CDMT01314
reversible: false
reactant: CDMT01313
reactant: CDMT01311
product: CDMT01315
name: 3-methyl-2-oxobutanoate hydroxymethyltransferase
type: Reaction
kinetic law: CDMT01316
fast: false
reactant: CDMT01312

CDMT01035
stoichiometry: 1.0
species: hco3 c
type: SpeciesReference

CDMT00389
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01108
stoichiometry: 1.0
species: pi p
type: SpeciesReference

CDMT01768
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01487
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01434
stoichiometry: 1.0
species: 3mop c
type: SpeciesReference

ADMDCr
kinetic law: CDMT00826
product: CDMT00825
product: CDMT00824
reactant: CDMT00823
reactant: CDMT00822
fast: false
reversible: false
name: Adenosylmethionine decarboxylase
type: Reaction

CDMT01722
stoichiometry: 2.0
species: pi c
type: SpeciesReference

SHKK
product: CDMT00846
name: shikimate kinase
reversible: false
product: CDMT00845
product: CDMT00844
type: Reaction
kinetic law: CDMT00847
reactant: CDMT00843
reactant: CDMT00842
fast: false

EF phe 45 L 40 c 41
kinetic law: CDMT00891
reactant: CDMT00889
fast: false
reversible: false
name: L-Phenylalanine exchange
type: Reaction

CDMT02001
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00771
stoichiometry: 1.0
species: 23dhmp c
type: SpeciesReference

CDMT01833
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00970
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01150
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01690
stoichiometry: 5.0E-5
species: nadh c
type: SpeciesReference

MECDPS
kinetic law: CDMT00167
product: CDMT00166
product: CDMT00165
reactant: CDMT00164
fast: false
reversible: false
name: "2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase"
type: Reaction

co2 c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: co2
type: Species

cmp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: cmp
type: Species

CDMT01082
stoichiometry: 1.0
species: dcamp c
type: SpeciesReference

CDMT00305
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

AHCYSNS
kinetic law: CDMT00396
product: CDMT00395
product: CDMT00394
reactant: CDMT00393
reactant: CDMT00392
fast: false
reversible: false
name: S-adenosylhomocysteine nucleosidase
type: Reaction

RBFSb
kinetic law: CDMT00227
product: CDMT00226
product: CDMT00225
reactant: CDMT00224
fast: false
reversible: false
name: riboflavin synthase
type: Reaction

CDMT01032
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

CDMT01761
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01371
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00599
stoichiometry: 1.0
species: thf c
type: SpeciesReference

CDMT00020
stoichiometry: 1.0
species: pi c
type: SpeciesReference

5apru c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 5apru
type: Species

556643
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01721
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00235
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01832
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00772
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

CDMT01083
stoichiometry: 1.0
species: gdp c
type: SpeciesReference

CDMT01691
stoichiometry: 1.3E-4
species: nadp c
type: SpeciesReference

CDMT00307
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00306
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

thmmp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: thmmp
type: Species

UP 8aonn
kinetic law: CDMT01211
product: CDMT01210
fast: false
reversible: false
name: 8aonn exchange
type: Reaction

CDMT00387
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01762
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01372
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00274
stoichiometry: 1.0
species: xu5p 45 D c
type: SpeciesReference

CDMT01033
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01611
stoichiometry: 1.0
species: amet c
type: SpeciesReference

556644
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01724
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00308
stoichiometry: 1.0
species: ribflv c
type: SpeciesReference

CDMT01084
stoichiometry: 2.0
species: h c
type: SpeciesReference

CDMT01831
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00232
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01763
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01439
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01030
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556869
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00386
stoichiometry: 1.0
species: glu 45 L c
type: SpeciesReference

CDMT00273
stoichiometry: 1.0
species: ru5p 45 D c
type: SpeciesReference

CDMT00233
stoichiometry: 1.0
species: imp c
type: SpeciesReference

CDMT00770
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

CDMT00508
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

CDMT01610
stoichiometry: 1.0
species: 8aonn c
type: SpeciesReference

adn c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: adn
type: Species

CDMT01830
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00309
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT01085
stoichiometry: 1.0
species: pi c
type: SpeciesReference

PRPPS
product: CDMT01555
reactant: CDMT01554
reversible: false
product: CDMT01557
reactant: CDMT01553
fast: false
kinetic law: CDMT01558
product: CDMT01556
name: phosphoribosylpyrophosphate synthetase
type: Reaction

556430
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01438
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01764
stoichiometry: 1.0
species: amp c
type: SpeciesReference

default
constant: true
units: volume
size: 1.0
spatial dimensions: 3.0
type: Compartment

CDMT00272
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01031
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00385
stoichiometry: 1.0
species: eig3p c
type: SpeciesReference

RBFSa
fast: false
reactant: CDMT00238
type: Reaction
reactant: CDMT00239
product: CDMT00240
reversible: false
product: CDMT00242
kinetic law: CDMT00243
product: CDMT00241
name: riboflavin synthase

CDMT01370
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01480
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00384
stoichiometry: 1.0
species: aicar c
type: SpeciesReference

CDMT00920
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00024
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01652
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00279
stoichiometry: 1.0
species: glu 45 L c
type: SpeciesReference

CDMT01694
stoichiometry: 5.0E-5
species: accoa c
type: SpeciesReference

CDMT00065
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT01331
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00974
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556646
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01613
stoichiometry: 1.0
species: dann c
type: SpeciesReference

CDMT01481
stoichiometry: 1.0
species: uamag c
type: SpeciesReference

CDMT00383
stoichiometry: 1.0
species: prlp c
type: SpeciesReference

556709
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00025
stoichiometry: 1.0
species: 3c2hmp c
type: SpeciesReference

CDMT00302
stoichiometry: 1.0
species: alaala c
type: SpeciesReference

CDMT01653
stoichiometry: 0.001
species: ribflv c
type: SpeciesReference

556686
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00278
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01695
stoichiometry: 3.0E-6
species: succoa c
type: SpeciesReference

CDMT00663
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

q8h2 c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: q8h2
type: Species

CDMT01941
stoichiometry: 1.0
species: dtdp c
type: SpeciesReference

CDMT01332
stoichiometry: 1.0
species: ru5p 45 D c
type: SpeciesReference

ADSL1r
kinetic law: CDMT02054
product: CDMT02053
product: CDMT02052
reactant: CDMT02051
fast: false
reversible: false
name: adenylsuccinate lyase
type: Reaction

CDMT00064
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01612
stoichiometry: 1.0
species: amob c
type: SpeciesReference

DF co2 40 c 41
kinetic law: CDMT00668
product: CDMT00667
fast: false
reversible: false
name: co2 exchange
type: Reaction

CDMT00344
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

ADK1
kinetic law: CDMT01767
product: CDMT01766
reactant: CDMT01765
reactant: CDMT01764
fast: false
reversible: false
name: adenylate kinase
type: Reaction

CDMT00382
stoichiometry: 1.0
species: gln 45 L c
type: SpeciesReference

CDMT00866
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01616
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556648
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00022
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00922
stoichiometry: 1.0
species: ptrc c
type: SpeciesReference

556708
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

datp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: datp
type: Species

CDMT00277
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

ahcys c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ahcys
type: Species

556540
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01654
stoichiometry: 5.0E-5
species: ACP c
type: SpeciesReference

CDMT01080
stoichiometry: 1.0
species: gtp c
type: SpeciesReference

556689
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

nac c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: nac
type: Species

CDMT01940
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT00341
stoichiometry: 1.0
species: coa c
type: SpeciesReference

CDMT01692
stoichiometry: 4.0E-4
species: nadph c
type: SpeciesReference

CDMT00063
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00972
stoichiometry: 1.0
species: pphn c
type: SpeciesReference

UAPGR
reversible: false
kinetic law: CDMT00746
type: Reaction
reactant: CDMT00742
reactant: CDMT00741
reactant: CDMT00743
name: UDP-N-acetylenolpyruvoylglucosamine reductase
fast: false
product: CDMT00745
product: CDMT00744

CDMT01720
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT00660
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

CDMT00738
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01615
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00023
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00381
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00276
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

PANTS
name: pantothenate synthase
reactant: CDMT00418
fast: false
type: Reaction
product: CDMT00420
product: CDMT00422
product: CDMT00419
reversible: false
product: CDMT00421
reactant: CDMT00416
kinetic law: CDMT00423
reactant: CDMT00417

CDMT01655
stoichiometry: 5.0E-5
species: udcpdp c
type: SpeciesReference

CDMT01547
stoichiometry: 1.0
species: glyc c
type: SpeciesReference

556688
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00304
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01081
stoichiometry: 1.0
species: imp c
type: SpeciesReference

CDMT01330
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

DTMPK
kinetic law: CDMT01942
product: CDMT01941
product: CDMT01940
reactant: CDMT01939
reactant: CDMT01938
fast: false
reversible: false
name: dTMP kinase
type: Reaction

CDMT00062
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00971
stoichiometry: 1.0
species: chor c
type: SpeciesReference

CDMT00342
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01693
stoichiometry: 6.0E-6
species: coa c
type: SpeciesReference

CDMT00661
stoichiometry: 1.0
species: dxyl5p c
type: SpeciesReference

CDMT00868
stoichiometry: 1.0
species: ser 45 L c
type: SpeciesReference

r5p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: r5p
type: Species

CDMT00739
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

UMPK
kinetic law: CDMT01119
product: CDMT01118
product: CDMT01117
reactant: CDMT01116
reactant: CDMT01115
fast: false
reversible: false
name: UMP kinase
type: Reaction

CDMT01769
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00979
stoichiometry: 3.0
species: h c
type: SpeciesReference

CDMT01656
stoichiometry: 5.0E-5
species: thf c
type: SpeciesReference

CDMT01379
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00028
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01546
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

GMHEPK
reactant: CDMT00881
fast: false
product: CDMT00883
reactant: CDMT00880
product: CDMT00884
type: Reaction
reversible: false
product: CDMT00882
kinetic law: CDMT00885
name: D-glycero-D-manno-heptose 7-phosphate kinase

CDMT01947
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

556822
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556706
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02048
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01484
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT00864
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01618
stoichiometry: 1.0
species: 4pasp c
type: SpeciesReference

CDMT00380
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01335
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00069
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00925
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

PRAIi
kinetic law: CDMT00078
product: CDMT00077
reactant: CDMT00076
fast: false
reversible: false
name: phosphoribosylanthranilate isomerase (irreversible)
type: Reaction

556795
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

UP gsn 40 c 41
kinetic law: CDMT02039
product: CDMT02038
fast: false
reversible: false
name: gsn exchange
type: Reaction

CDMT00129
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01698
stoichiometry: 0.33333
species: Biomass c
type: SpeciesReference

OCBT
product: CDMT01900
kinetic law: CDMT01902
name: ornithine carbamoyltransferase
type: Reaction
product: CDMT01899
fast: false
product: CDMT01901
reactant: CDMT01898
reactant: CDMT01897
reversible: false

CDMT00779
stoichiometry: 1.0
species: pep c
type: SpeciesReference

CDMT01545
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00290
stoichiometry: 1.0
species: thr 45 L c
type: SpeciesReference

CDMT00978
stoichiometry: 1.0
species: scl c
type: SpeciesReference

CDMT01657
stoichiometry: 5.0E-5
species: fmnh2 c
type: SpeciesReference

g6p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: g6p
type: Species

CDMT01946
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00029
stoichiometry: 1.0
species: nadh c
type: SpeciesReference

CDMT02049
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

fad c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: fad
type: Species

CDMT01485
stoichiometry: 1.0
species: ugmd c
type: SpeciesReference

556705
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00865
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01617
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556862
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00068
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT00441
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00924
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01699
stoichiometry: 45.5608
species: adp c
type: SpeciesReference

556796
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01945
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00340
stoichiometry: 1.0
species: acgam1p c
type: SpeciesReference

CDMT02008
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00977
stoichiometry: 1.0
species: fe2 c
type: SpeciesReference

ade c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ade
type: Species

CDMT00667
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

CDMT02046
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01038
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01658
stoichiometry: 0.00645
species: clpn EC c
type: SpeciesReference

CDMT01377
stoichiometry: 1.0
species: udcpp c
type: SpeciesReference

CDMT01544
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00026
stoichiometry: 1.0
species: nad c
type: SpeciesReference

CDMT00862
stoichiometry: 1.0
species: trdrd c
type: SpeciesReference

TALA
kinetic law: CDMT01250
product: CDMT01249
product: CDMT01248
reactant: CDMT01247
reactant: CDMT01246
fast: false
reversible: false
name: transaldolase
type: Reaction

CDMT01482
stoichiometry: 1.0
species: adp c
type: SpeciesReference

dtdp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dtdp
type: Species

uaccg c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: uaccg
type: Species

CDMT01696
stoichiometry: 45.5628
species: pi c
type: SpeciesReference

CDMT01333
stoichiometry: 1.0
species: db4p c
type: SpeciesReference

556861
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00976
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00777
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT00067
stoichiometry: 1.0
species: uama c
type: SpeciesReference

CDMT02007
stoichiometry: 1.0
species: fdp c
type: SpeciesReference

CDMT00664
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01944
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

FMNAT
product: CDMT00796
type: Reaction
fast: false
reactant: CDMT00792
reactant: CDMT00794
kinetic law: CDMT00797
reactant: CDMT00793
product: CDMT00795
name: FMN adenylyltransferase
reversible: false

556821
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00300
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01039
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

phpyr c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: phpyr
type: Species

CDMT00027
stoichiometry: 1.0
species: 3c4mop c
type: SpeciesReference

CDMT01659
stoichiometry: 5.0E-5
species: pnto 45 R c
type: SpeciesReference

pran c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: pran
type: Species

TPI
kinetic law: CDMT00567
product: CDMT00566
reactant: CDMT00565
fast: false
reversible: false
name: triose-phosphate isomerase
type: Reaction

CDMT01619
stoichiometry: 1.0
species: h c
type: SpeciesReference

556703
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01483
stoichiometry: 1.0
species: h c
type: SpeciesReference

EF akg 40 c 41
kinetic law: CDMT01134
reactant: CDMT01132
fast: false
reversible: false
name: akg efflux
type: Reaction

CDMT00128
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01697
stoichiometry: 0.7302
species: ppi c
type: SpeciesReference

G1PACT
kinetic law: CDMT00343
reversible: false
product: CDMT00342
product: CDMT00341
fast: false
name: glucosamine-1-phosphate N-acetyltransferase
type: Reaction
product: CDMT00340
reactant: CDMT00339
reactant: CDMT00338

CDMT00926
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01334
stoichiometry: 1.0
species: for c
type: SpeciesReference

556798
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00066
stoichiometry: 1.0
species: glu 45 D c
type: SpeciesReference

CDMT00975
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00778
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00665
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02006
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT01943
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

ins c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ins
type: Species

CDMT00445
stoichiometry: 8.0
species: ipdp c
type: SpeciesReference

CDMT00282
stoichiometry: 1.0
species: hisp c
type: SpeciesReference

CDMT01582
stoichiometry: 1.0
species: h c
type: SpeciesReference

556480
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556593
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556792
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556815
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

GMHEPAT
type: Reaction
reactant: CDMT01890
reactant: CDMT01889
kinetic law: CDMT01893
product: CDMT01892
reactant: CDMT01888
product: CDMT01891
name: D-glycero-D-manno-hepose 1-phosphate adenyltransferase
reversible: false
fast: false

CDMT01477
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556506
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00744
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

CDMT01541
stoichiometry: 1.0
species: apoACP c
type: SpeciesReference

CDMT00404
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

CDMT01609
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00631
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT02118
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT02057
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01938
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT01860
stoichiometry: 1.0
species: dgtp c
type: SpeciesReference

556601
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556754
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

PAPPT3
kinetic law: CDMT00967
product: CDMT00966
product: CDMT00965
reactant: CDMT00964
reactant: CDMT00963
fast: false
reversible: false
name: "phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)"
type: Reaction

uaagmda c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: uaagmda
type: Species

CDMT00483
stoichiometry: 1.0
species: skm5p c
type: SpeciesReference

CDMT00444
stoichiometry: 1.0
species: frdp c
type: SpeciesReference

CDMT01581
stoichiometry: 1.0
species: dhf c
type: SpeciesReference

CDMT00406
stoichiometry: 1.0
species: gmp c
type: SpeciesReference

CDMT01339
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00125
stoichiometry: 1.0
species: gly c
type: SpeciesReference

CDMT01476
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

EF leu 45 L 40 c 41
kinetic law: CDMT00951
reactant: CDMT00949
fast: false
reversible: false
name: Leucine exchange
type: Reaction

CDMT00743
stoichiometry: 1.0
species: uaccg c
type: SpeciesReference

CDMT00510
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02117
stoichiometry: 1.0
species: h c
type: SpeciesReference

556714
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00630
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

EX ade 40 c 41
kinetic law: CDMT01284
product: CDMT01283
fast: false
reversible: false
name: ade exchange
type: Reaction

CDMT00405
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02056
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00482
stoichiometry: 1.0
species: pep c
type: SpeciesReference

556546
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556753
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01939
stoichiometry: 1.0
species: dtmp c
type: SpeciesReference

556482
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

2dr1p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 2dr1p
type: Species

556813
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01580
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00443
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00280
stoichiometry: 1.0
species: imacp c
type: SpeciesReference

CDMT01147
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

CDMT00124
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01501
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

556711
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01338
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556595
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00742
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

556680
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556508
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02116
stoichiometry: 1.0
species: dump c
type: SpeciesReference

CDMT00485
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT00968
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

DAPE
kinetic law: CDMT00701
product: CDMT00700
reactant: CDMT00699
fast: false
reversible: false
name: diaminopimelate epimerase
type: Reaction

CDMT01936
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT02055
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00590
stoichiometry: 1.0
species: pi c
type: SpeciesReference

556812
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

dctp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dctp
type: Species

glu 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: glu-L
type: Species

CDMT00281
stoichiometry: 1.0
species: akg c
type: SpeciesReference

dmlz c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dmlz
type: Species

CDMT00442
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556548
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

ADSK
product: CDMT01155
reactant: CDMT01153
product: CDMT01157
reversible: false
product: CDMT01156
reactant: CDMT01154
kinetic law: CDMT01158
type: Reaction
name: adenylyl-sulfate kinase
fast: false

CDMT01474
stoichiometry: 1.0
species: hxan c
type: SpeciesReference

556712
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01148
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT00123
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

acg5sa c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: acg5sa
type: Species

CDMT01337
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01502
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556793
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00403
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00741
stoichiometry: 1.0
species: h c
type: SpeciesReference

akg c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: akg
type: Species

CDMT02115
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01540
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00969
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00484
stoichiometry: 1.0
species: 3psme c
type: SpeciesReference

556751
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01937
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00409
stoichiometry: 1.0
species: imp c
type: SpeciesReference

556597
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00749
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556502
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

IPPS
reactant: CDMT01873
name: 2-isopropylmalate synthase
product: CDMT01875
product: CDMT01876
fast: false
product: CDMT01877
reactant: CDMT01874
kinetic law: CDMT01878
type: Reaction
reactant: CDMT01872
reversible: false

556605
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01298
stoichiometry: 2.0
species: atp c
type: SpeciesReference

CDMT00122
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556819
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00286
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00449
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556750
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

EF ile 45 L 40 c 41
kinetic law: CDMT00349
reactant: CDMT00347
fast: false
reversible: false
name: Isoleucine exchange
type: Reaction

CDMT02053
stoichiometry: 1.0
species: fum c
type: SpeciesReference

CDMT01259
stoichiometry: 1.0
species: pi c
type: SpeciesReference

UP 2obut
kinetic law: CDMT00929
product: CDMT00928
fast: false
reversible: false
name: 2obut exchange
type: Reaction

CDMT01864
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00487
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

r1p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: r1p
type: Species

556682
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01979
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00347
stoichiometry: 1.0
species: ile 45 L c
type: SpeciesReference

CDMT00748
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556818
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01299
stoichiometry: 1.0
species: gln 45 L c
type: SpeciesReference

CDMT00073
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00287
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

556683
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

UP so4 40 c 41
kinetic law: CDMT00803
product: CDMT00802
fast: false
reversible: false
name: so4 exchange
type: Reaction

556542
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02052
stoichiometry: 1.0
species: amp c
type: SpeciesReference

CDMT01258
stoichiometry: 1.0
species: h c
type: SpeciesReference

DF h2o 40 c 41
kinetic law: CDMT01140
product: CDMT01139
fast: false
reversible: false
name: h2o exchange
type: Reaction

G6PDH2r
product: CDMT00011
kinetic law: CDMT00013
name: glucose 6-phosphate dehydrogenase
reactant: CDMT00008
type: Reaction
fast: false
reversible: false
product: CDMT00010
reactant: CDMT00009
product: CDMT00012

ATPPRT
kinetic law: CDMT00366
product: CDMT00365
product: CDMT00364
reactant: CDMT00363
reactant: CDMT00362
fast: false
reversible: false
name: ATP phosphoribosyltransferase
type: Reaction

CDMT01865
stoichiometry: 1.0
species: 3c3hmp c
type: SpeciesReference

CDMT01978
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

gthrd c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: gthrd
type: Species

CDMT01479
stoichiometry: 1.0
species: 26dap 45 M c
type: SpeciesReference

CDMT00747
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556599
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00346
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00179
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00407
stoichiometry: 2.0
species: h c
type: SpeciesReference

556790
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00284
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00447
stoichiometry: 1.0
species: udcpdp c
type: SpeciesReference

556603
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01296
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01257
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT02051
stoichiometry: 1.0
species: dcamp c
type: SpeciesReference

glc 45 D p
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: p
name: glc-D
type: Species

CDMT00819
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00070
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01975
stoichiometry: 1.0
species: orot5p c
type: SpeciesReference

CDMT01651
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00489
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01862
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

556504
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01478
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00859
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

CDMT00408
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

CDMT01190
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT00345
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00446
stoichiometry: 8.0
species: ppi c
type: SpeciesReference

CDMT00559
stoichiometry: 3.0
species: h c
type: SpeciesReference

CDMT00285
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00071
stoichiometry: 1.0
species: uamag c
type: SpeciesReference

CDMT01297
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02050
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556816
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01256
stoichiometry: 1.0
species: uamr c
type: SpeciesReference

556544
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556685
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01650
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01976
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT01863
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00488
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00930
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00745
stoichiometry: 1.0
species: uamr c
type: SpeciesReference

CDMT01973
stoichiometry: 1.0
species: orot c
type: SpeciesReference

his 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: his-L
type: Species

CDMT01041
stoichiometry: 1.0
species: mnl p
type: SpeciesReference

CDMT01255
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00596
stoichiometry: 1.0
species: hcys 45 L c
type: SpeciesReference

CDMT01380
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556432
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00817
stoichiometry: 1.0
species: spmd c
type: SpeciesReference

CDMT01102
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT01141
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00558
stoichiometry: 1.0
species: atp c
type: SpeciesReference

nadh c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: nadh
type: Species

CDMT00177
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556488
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01869
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01191
stoichiometry: 1.0
species: utp c
type: SpeciesReference

fmnh2 c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: fmnh2
type: Species

CDMT00239
stoichiometry: 1.0
species: db4p c
type: SpeciesReference

CDMT01254
stoichiometry: 1.0
species: ala 45 L c
type: SpeciesReference

CDMT01101
stoichiometry: 1.0
species: dnad c
type: SpeciesReference

CDMT01974
stoichiometry: 1.0
species: prpp c
type: SpeciesReference

DF o2 40 c 41
kinetic law: CDMT01393
product: CDMT01392
fast: false
reversible: false
name: o2 exchange
type: Reaction

CDMT01509
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

ATPS4rpp
reversible: false
name: ATP synthase (four protons for one ATP) (periplasm)
reactant: CDMT00557
type: Reaction
product: CDMT00559
product: CDMT00558
kinetic law: CDMT00561
fast: false
reactant: CDMT00555
reactant: CDMT00556
product: CDMT00560

CDMT00595
stoichiometry: 1.0
species: 5mthf c
type: SpeciesReference

pi c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: pi
type: Species

CDMT00012
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

h2s c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: h2s
type: Species

CDMT01142
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00557
stoichiometry: 1.0
species: pi c
type: SpeciesReference

acg5p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: acg5p
type: Species

CDMT00178
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

3dhq c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 3dhq
type: Species

CDMT01192
stoichiometry: 1.0
species: adp c
type: SpeciesReference

so3 c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: so3
type: Species

CDMT00519
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00238
stoichiometry: 1.0
species: 4r5au c
type: SpeciesReference

CDMT01589
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00639
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00515
stoichiometry: 1.0
species: dcdp c
type: SpeciesReference

ASPK
kinetic law: CDMT01228
product: CDMT01227
product: CDMT01226
reactant: CDMT01225
reactant: CDMT01224
fast: false
reversible: false
name: aspartate kinase
type: Reaction

CDMT01866
stoichiometry: 1.0
species: 2ippm c
type: SpeciesReference

CDMT01193
stoichiometry: 1.0
species: ctp c
type: SpeciesReference

PGI
kinetic law: CDMT00094
product: CDMT00093
reactant: CDMT00092
fast: false
reversible: false
name: glucose-6-phosphate isomerase
type: Reaction

CDMT01100
stoichiometry: 1.0
species: nicrnt c
type: SpeciesReference

CDMT01253
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

dgtp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dgtp
type: Species

CDMT00598
stoichiometry: 1.0
species: met 45 L c
type: SpeciesReference

CDMT01971
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

actp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: actp
type: Species

CDMT00815
stoichiometry: 1.0
species: 5mta c
type: SpeciesReference

556434
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00556
stoichiometry: 4.0
species: h p
type: SpeciesReference

CDMT00175
stoichiometry: 1.0
species: h c
type: SpeciesReference

3c3hmp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 3c3hmp
type: Species

NADP dummy
kinetic law: CDMT02131
product: CDMT02130
reactant: CDMT02129
fast: false
reversible: false
name: NADP dummy
type: Reaction

CDMT00011
stoichiometry: 1.0
species: h c
type: SpeciesReference

556500
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01588
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

orn c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: orn
type: Species

CDMT00638
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00237
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00288
stoichiometry: 1.0
species: phom c
type: SpeciesReference

CDMT00516
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01867
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01194
stoichiometry: 1.0
species: glu 45 L c
type: SpeciesReference

CDMT00597
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01972
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

2mecdp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 2mecdp
type: Species

CDMT00636
stoichiometry: 1.0
species: ade c
type: SpeciesReference

CDMT01252
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00816
stoichiometry: 1.0
species: h c
type: SpeciesReference

4c2me c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 4c2me
type: Species

pap c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: pap
type: Species

CDMT00010
stoichiometry: 1.0
species: 6pgl c
type: SpeciesReference

556759
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00555
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT01587
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00517
stoichiometry: 1.0
species: trdox c
type: SpeciesReference

CDMT00236
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00289
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01106
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

alac 45 S c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: alac-S
type: Species

556436
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00813
stoichiometry: 1.0
species: ametam c
type: SpeciesReference

CDMT01432
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00592
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02114
stoichiometry: 1.0
species: dutp c
type: SpeciesReference

CDMT00635
stoichiometry: 1.0
species: 5mtr c
type: SpeciesReference

CDMT01718
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00740
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

PGK
kinetic law: CDMT01760
product: CDMT01759
product: CDMT01758
reactant: CDMT01757
reactant: CDMT01756
fast: false
reversible: false
name: phosphoglycerate kinase
type: Reaction

CDMT01195
stoichiometry: 2.0
species: h c
type: SpeciesReference

CDMT00513
stoichiometry: 1.0
species: cdp c
type: SpeciesReference

CDMT01251
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00017
stoichiometry: 1.0
species: 5aprbu c
type: SpeciesReference

CDMT01503
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00173
stoichiometry: 2.0
species: ahcys c
type: SpeciesReference

CDMT01473
stoichiometry: 1.0
species: 2dr1p c
type: SpeciesReference

CDMT00554
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01145
stoichiometry: 1.0
species: h c
type: SpeciesReference

ugmd c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ugmd
type: Species

CDMT00812
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

OBJECTIVE COEFFICIENT
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01079
stoichiometry: 1.0
species: asp 45 L c
type: SpeciesReference

556484
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02113
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01105
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01970
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01433
stoichiometry: 1.0
species: 23dhmp c
type: SpeciesReference

CDMT00814
stoichiometry: 1.0
species: ptrc c
type: SpeciesReference

CDMT00401
stoichiometry: 1.0
species: uppg3 c
type: SpeciesReference

CDMT00634
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

UGMDDS
kinetic law: CDMT01422
type: Reaction
product: CDMT01418
reversible: false
fast: false
product: CDMT01419
reactant: CDMT01415
reactant: CDMT01416
product: CDMT01421
name: "UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase"
reactant: CDMT01417
product: CDMT01420

HXPRT
kinetic law: CDMT01805
product: CDMT01804
product: CDMT01803
reactant: CDMT01802
reactant: CDMT01801
fast: false
reversible: false
name: hypoxanthine phosphoribosyltransferase (Hypoxanthine)
type: Reaction

CDMT01196
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT00514
stoichiometry: 1.0
species: trdrd c
type: SpeciesReference

CDMT01719
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

udcpdp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: udcpdp
type: Species

CDMT01504
stoichiometry: 1.0
species: dad 45 2 c
type: SpeciesReference

CDMT01146
stoichiometry: 1.0
species: 3ig3p c
type: SpeciesReference

CDMT00016
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556757
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00553
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01472
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01585
stoichiometry: 1.0
species: thf c
type: SpeciesReference

CDMT00700
stoichiometry: 1.0
species: 26dap 45 M c
type: SpeciesReference

PYK
product: CDMT00780
kinetic law: CDMT00782
name: pyruvate kinase
reactant: CDMT00779
reversible: false
fast: false
product: CDMT00781
reactant: CDMT00777
type: Reaction
reactant: CDMT00778

CDMT00174
stoichiometry: 1.0
species: dscl c
type: SpeciesReference

CDMT01078
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00594
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556756
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01104
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT02112
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

paps c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: paps
type: Species

CDMT00481
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

OMCDC
kinetic law: CDMT01059
product: CDMT01058
product: CDMT01057
reactant: CDMT01056
reactant: CDMT01055
fast: false
reversible: false
name: 2-Oxo-4-methyl-3-carboxypentanoate decarboxylation
type: Reaction

CDMT01827
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT01506
stoichiometry: 1.0
species: 2dr1p c
type: SpeciesReference

DHFR
name: dihydrofolate reductase
kinetic law: CDMT01586
reactant: CDMT01582
fast: false
product: CDMT01584
reversible: false
product: CDMT01585
type: Reaction
reactant: CDMT01581
reactant: CDMT01583

CDMT00511
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00633
stoichiometry: 1.0
species: 5mta c
type: SpeciesReference

CDMT01430
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

PGM
kinetic law: CDMT01752
product: CDMT01751
reactant: CDMT01750
fast: false
reversible: false
name: phosphoglycerate mutase
type: Reaction

eig3p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: eig3p
type: Species

CDMT00015
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

succoa c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: succoa
type: Species

CDMT01505
stoichiometry: 1.0
species: pi c
type: SpeciesReference

556486
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556591
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01471
stoichiometry: 1.0
species: din c
type: SpeciesReference

8aonn c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 8aonn
type: Species

CDMT00810
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01584
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

CDMT00171
stoichiometry: 2.0
species: amet c
type: SpeciesReference

CDMT00552
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556438
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01143
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

FMNRED
kinetic law: CDMT00044
product: CDMT00043
product: CDMT00042
reactant: CDMT00041
reactant: CDMT00040
fast: false
reversible: false
name: FMN reductase
type: Reaction

adphep 45 D 44 D c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: adphep-D,D
type: Species

CDMT00593
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT02111
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01828
stoichiometry: 1.0
species: gtp c
type: SpeciesReference

CDMT00480
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00512
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01507
stoichiometry: 1.0
species: ade c
type: SpeciesReference

PGL
kinetic law: CDMT01746
product: CDMT01745
product: CDMT01744
reactant: CDMT01743
reactant: CDMT01742
fast: false
reversible: false
name: 6-phosphogluconolactonase
type: Reaction

CDMT00632
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01198
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01431
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

DHFS
reactant: CDMT01591
reactant: CDMT01592
kinetic law: CDMT01597
type: Reaction
product: CDMT01593
reactant: CDMT01590
product: CDMT01594
product: CDMT01595
fast: false
name: dihydrofolate synthase
product: CDMT01596
reversible: false

CDMT00014
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

PTAr
kinetic law: CDMT01236
product: CDMT01235
product: CDMT01234
reactant: CDMT01233
reactant: CDMT01232
fast: false
reversible: false
name: phosphotransacetylase
type: Reaction

CDMT01470
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01583
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

CDMT00811
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

CDMT01144
stoichiometry: 1.0
species: 2cpr5p c
type: SpeciesReference

CDMT00172
stoichiometry: 1.0
species: uppg3 c
type: SpeciesReference

glucys c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: glucys
type: Species

CDMT00006
stoichiometry: 1.0
species: mlthf c
type: SpeciesReference

556853
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00192
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT02015
stoichiometry: 1.0
species: prfp c
type: SpeciesReference

CDMT01076
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00785
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01823
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01793
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00870
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

SHCHF
kinetic law: CDMT00981
product: CDMT00980
product: CDMT00979
reactant: CDMT00978
reactant: CDMT00977
fast: false
reversible: false
name: sirohydrochlorin ferrochetalase
type: Reaction

CDMT01755
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

h2o c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: h2o
type: Species

CDMT01498
stoichiometry: 1.0
species: ade c
type: SpeciesReference

CDMT01423
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

UP ala 45 L 40 c 41
kinetic law: CDMT01773
product: CDMT01772
fast: false
reversible: false
name: Alanine exchange
type: Reaction

CDMT01385
stoichiometry: 1.0
species: 2me4p c
type: SpeciesReference

CDMT01178
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01717
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

CDMT01022
stoichiometry: 1.0
species: chor c
type: SpeciesReference

CDMT02090
stoichiometry: 10.0
species: nadh c
type: SpeciesReference

CDMT02014
stoichiometry: 1.0
species: prbamp c
type: SpeciesReference

CDMT00560
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

IPDPS
product: CDMT00200
product: CDMT00202
reactant: CDMT00198
fast: false
reactant: CDMT00199
reversible: false
kinetic law: CDMT00203
product: CDMT00201
name: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (ipdp)
reactant: CDMT00197
type: Reaction

CDMT01794
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01077
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

CDMT00830
stoichiometry: 1.0
species: arg 45 L c
type: SpeciesReference

CDMT01822
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00377
stoichiometry: 1.0
species: nh4 c
type: SpeciesReference

CDMT01499
stoichiometry: 1.0
species: r1p c
type: SpeciesReference

for c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: for
type: Species

CDMT00191
stoichiometry: 1.0
species: h2mb4p c
type: SpeciesReference

CDMT01756
stoichiometry: 1.0
species: 13dpg c
type: SpeciesReference

CDMT01386
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

CDMT02091
stoichiometry: 10.0
species: q8 c
type: SpeciesReference

CDMT01716
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00871
units: mmol per gDW per hr
value: 10.0
type: LocalParameter

CDMT01023
stoichiometry: 1.0
species: gln 45 L c
type: SpeciesReference

dhap c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dhap
type: Species

CDMT01714
stoichiometry: 1.0
species: thmmp c
type: SpeciesReference

CDMT01795
stoichiometry: 1.0
species: amob c
type: SpeciesReference

556855
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00008
stoichiometry: 1.0
species: g6p c
type: SpeciesReference

APRAUR
product: CDMT00724
reactant: CDMT00722
kinetic law: CDMT00726
product: CDMT00725
fast: false
reversible: false
reactant: CDMT00723
type: Reaction
name: 5-amino-6-(5-phosphoribosylamino)uracil reductase
reactant: CDMT00721

MTAN
kinetic law: CDMT00637
product: CDMT00636
product: CDMT00635
reactant: CDMT00634
reactant: CDMT00633
fast: false
reversible: false
name: methylthioadenosine nucleosidase
type: Reaction

CDMT02017
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00194
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01074
stoichiometry: 1.0
species: nac c
type: SpeciesReference

CDMT00787
stoichiometry: 1.0
species: pg EC c
type: SpeciesReference

CDMT00833
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01648
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

DPR
reactant: CDMT01563
reactant: CDMT01562
product: CDMT01566
reactant: CDMT01564
product: CDMT01565
reversible: false
type: Reaction
fast: false
name: 2-dehydropantoate 2-reductase
kinetic law: CDMT01567

CDMT01425
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01826
stoichiometry: 1.0
species: gdp c
type: SpeciesReference

CDMT01753
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01024
stoichiometry: 1.0
species: anth c
type: SpeciesReference

CDMT00872
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

SADT2
reactant: CDMT01322
reactant: CDMT01320
reactant: CDMT01323
kinetic law: CDMT01328
product: CDMT01324
product: CDMT01327
reactant: CDMT01321
reversible: false
fast: false
product: CDMT01325
product: CDMT01326
name: Sulfate adenyltransferase
type: Reaction

CDMT02092
stoichiometry: 35.0
species: h p
type: SpeciesReference

CDMT01176
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT00562
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00009
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

CDMT01824
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01424
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01388
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00379
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01754
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01025
stoichiometry: 1.0
species: glu 45 L c
type: SpeciesReference

CDMT01825
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT00873
stoichiometry: 1.0
species: 2pg c
type: SpeciesReference

gly c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: gly
type: Species

CDMT01175
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT02093
stoichiometry: 10.0
species: nad c
type: SpeciesReference

CDMT01072
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

IGPDH
kinetic law: CDMT01969
product: CDMT01968
product: CDMT01967
reactant: CDMT01966
fast: false
reversible: false
name: imidazoleglycerol-phosphate dehydratase
type: Reaction

556739
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

2dhp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 2dhp
type: Species

dump c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dump
type: Species

CDMT02011
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00980
stoichiometry: 1.0
species: sheme c
type: SpeciesReference

CDMT01579
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

UP fe2
kinetic law: CDMT00623
product: CDMT00622
fast: false
reversible: false
name: fe2 exchange
type: Reaction

CDMT00781
stoichiometry: 1.0
species: pyr c
type: SpeciesReference

CDMT01712
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02094
stoichiometry: 10.0
species: q8h2 c
type: SpeciesReference

CDMT01381
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00374
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01751
stoichiometry: 1.0
species: 2pg c
type: SpeciesReference

CDMT01427
stoichiometry: 1.0
species: 3mob c
type: SpeciesReference

CDMT01790
stoichiometry: 10.0
species: q8 c
type: SpeciesReference

CDMT00221
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

dnad c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dnad
type: Species

EF ac 40 c 41
kinetic law: CDMT01492
reactant: CDMT01490
fast: false
reversible: false
name: ac efflux
type: Reaction

CDMT02010
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01711
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00618
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

556633
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00031
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00260
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556856
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01382
stoichiometry: 1.0
species: dxyl5p c
type: SpeciesReference

MTHFD
kinetic law: CDMT00257
product: CDMT00256
product: CDMT00255
reactant: CDMT00254
reactant: CDMT00253
fast: false
reversible: false
name: methylenetetrahydrofolate dehydrogenase (NADP)
type: Reaction

CDMT00373
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

UP mnl 40 p 41
kinetic law: CDMT01042
product: CDMT01041
fast: false
reversible: false
name: mnl exchange
type: Reaction

556442
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

nicrnt c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: nicrnt
type: Species

CDMT01426
stoichiometry: 1.0
species: 23dhmb c
type: SpeciesReference

CDMT00783
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00982
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

DHAD2
kinetic law: CDMT01436
product: CDMT01435
product: CDMT01434
reactant: CDMT01433
fast: false
reversible: false
name: "Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)"
type: Reaction

CDMT02096
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02013
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT00222
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

grdp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: grdp
type: Species

CDMT00619
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01710
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

GLCptspp
kinetic law: CDMT00478
product: CDMT00477
product: CDMT00476
reactant: CDMT00475
reactant: CDMT00474
fast: false
reversible: false
name: D-glucose transport via PEP:Pyr PTS (periplasm)
type: Reaction

556859
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01383
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01020
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00032
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01070
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00190
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01300
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

EX succ 40 c 41
kinetic law: CDMT00263
product: CDMT00262
fast: false
reversible: false
name: succ exchange
type: Reaction

sheme c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: sheme
type: Species

CDMT00784
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01792
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01820
stoichiometry: 1.0
species: pran c
type: SpeciesReference

DHAD1
kinetic law: CDMT01429
product: CDMT01428
product: CDMT01427
reactant: CDMT01426
fast: false
reversible: false
name: "dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)"
type: Reaction

CDMT01340
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

5mta c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 5mta
type: Species

CDMT02097
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556631
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00223
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02012
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01021
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01750
stoichiometry: 1.0
species: 3pg c
type: SpeciesReference

CDMT00375
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00262
stoichiometry: 1.0
species: succ c
type: SpeciesReference

lys 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: lys-L
type: Species

556858
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556440
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

EF val 45 L 40 c 41
kinetic law: CDMT00334
reactant: CDMT00332
fast: false
reversible: false
name: L-Valine exchange
type: Reaction

dhf c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dhf
type: Species

CDMT01384
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

CDMT00033
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01179
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01071
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT02130
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

M1PD
reactant: CDMT02058
product: CDMT02062
product: CDMT02060
product: CDMT02061
name: mannitol-1-phosphate 5-dehydrogenase
reactant: CDMT02059
kinetic law: CDMT02063
fast: false
reversible: false
type: Reaction

CDMT01428
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01642
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01536
stoichiometry: 1.0
species: ump c
type: SpeciesReference

556552
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556677
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00878
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00370
stoichiometry: 1.0
species: ru5p 45 D c
type: SpeciesReference

imacp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: imacp
type: Species

CDMT00034
stoichiometry: 1.0
species: cys 45 L c
type: SpeciesReference

CDMT01490
stoichiometry: 1.0
species: ac c
type: SpeciesReference

nadph c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: nadph
type: Species

DB4PS
kinetic law: CDMT01336
product: CDMT01335
product: CDMT01334
product: CDMT01333
reactant: CDMT01332
fast: false
reversible: false
name: "3,4-Dihydroxy-2-butanone-4-phosphate synthase"
type: Reaction

CDMT00265
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00672
stoichiometry: 1.0
species: 3dhq c
type: SpeciesReference

prbatp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: prbatp
type: Species

CDMT00119
stoichiometry: 1.0
species: his 45 L c
type: SpeciesReference

CDMT00935
stoichiometry: 1.0
species: ACP c
type: SpeciesReference

CDMT02098
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01603
stoichiometry: 1.0
species: utp c
type: SpeciesReference

CDMT00879
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556789
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00075
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

2obut c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 2obut
type: Species

q8 c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: q8
type: Species

CDMT01341
stoichiometry: 1.0
species: hisp c
type: SpeciesReference

CDMT01680
stoichiometry: 0.087
species: cys 45 L c
type: SpeciesReference

CDMT00984
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01293
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT01643
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01535
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

prfp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: prfp
type: Species

556676
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556637
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00933
stoichiometry: 1.0
species: apoACP c
type: SpeciesReference

CDMT00264
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

Biomass c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: Biomass
type: Species

CDMT00934
stoichiometry: 1.0
species: coa c
type: SpeciesReference

CDMT01602
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00727
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

gmhep7p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: gmhep7p
type: Species

6pgl c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 6pgl
type: Species

CDMT01342
stoichiometry: 1.0
species: histd c
type: SpeciesReference

CDMT01292
stoichiometry: 2.0
species: h c
type: SpeciesReference

CDMT00074
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00983
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00330
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01681
stoichiometry: 0.582
species: gly c
type: SpeciesReference

CDMT00673
stoichiometry: 1.0
species: 3dhsk c
type: SpeciesReference

CDMT01538
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556550
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01640
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT00932
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01601
stoichiometry: 1.0
species: acgam1p c
type: SpeciesReference

CDMT00728
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556787
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00674
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01682
stoichiometry: 0.05
species: spmd c
type: SpeciesReference

CDMT01539
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01295
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00331
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01343
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT00986
stoichiometry: 1.0
species: h2mb4p c
type: SpeciesReference

EF arg 45 L 40 c 41
kinetic law: CDMT00832
reactant: CDMT00830
fast: false
reversible: false
name: arg-L efflux
type: Reaction

CDMT00077
stoichiometry: 1.0
species: 2cpr5p c
type: SpeciesReference

CDMT01930
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00037
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00266
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

hemeO c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: hemeO
type: Species

556674
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01493
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00371
stoichiometry: 1.0
species: r5p c
type: SpeciesReference

CDMT00931
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556589
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556635
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

cbasp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: cbasp
type: Species

CDMT00332
stoichiometry: 1.0
species: val 45 L c
type: SpeciesReference

CDMT01600
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00729
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01683
stoichiometry: 1.0E-5
species: fad c
type: SpeciesReference

CDMT00076
stoichiometry: 1.0
species: pran c
type: SpeciesReference

CDMT00985
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01494
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

thf c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: thf
type: Species

CDMT01608
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

ACPS1
name: acyl-carrier protein synthase
product: CDMT00935
product: CDMT00936
reactant: CDMT00933
fast: false
kinetic law: CDMT00938
type: Reaction
reactant: CDMT00934
product: CDMT00937
reversible: false

CDMT00874
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

pep c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: pep
type: Species

pphn c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: pphn
type: Species

CDMT02058
stoichiometry: 1.0
species: mnl1p c
type: SpeciesReference

CDMT01026
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01532
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00989
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01646
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01389
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00038
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00789
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02019
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00988
stoichiometry: 1.0
species: dmpp c
type: SpeciesReference

CDMT01932
stoichiometry: 1.0
species: hom 45 L c
type: SpeciesReference

CDMT01684
stoichiometry: 0.013297
species: dgtp c
type: SpeciesReference

CDMT00676
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00939
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00079
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

METAT
product: CDMT01950
reactant: CDMT01946
type: Reaction
name: methionine adenosyltransferase
reversible: false
fast: false
reactant: CDMT01948
product: CDMT01951
reactant: CDMT01947
kinetic law: CDMT01952
product: CDMT01949

CDMT01345
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00450
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

dutp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: dutp
type: Species

CDMT01607
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00875
stoichiometry: 1.0
species: pep c
type: SpeciesReference

CDMT01495
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02059
stoichiometry: 1.0
species: nad c
type: SpeciesReference

histd c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: histd
type: Species

CDMT01027
stoichiometry: 1.0
species: pyr c
type: SpeciesReference

CDMT00268
stoichiometry: 1.0
species: asp 45 L c
type: SpeciesReference

CDMT00039
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01647
stoichiometry: 1.0
species: dhor 45 S c
type: SpeciesReference

CDMT01531
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

ACP c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ACP
type: Species

CDMT00987
stoichiometry: 1.0
species: nadh c
type: SpeciesReference

CDMT00677
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01931
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

CDMT02018
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01685
stoichiometry: 0.036803
species: dttp c
type: SpeciesReference

CDMT00116
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

EF met 45 L 40 c 41
kinetic law: CDMT00249
reactant: CDMT00247
fast: false
reversible: false
name: Methionine exchange
type: Reaction

DCTPD
product: CDMT00753
product: CDMT00754
name: dCTP deaminase
kinetic law: CDMT00755
type: Reaction
reactant: CDMT00750
reactant: CDMT00752
reversible: false
fast: false
reactant: CDMT00751

CDMT00451
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01346
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556786
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01496
stoichiometry: 1.0
species: adn c
type: SpeciesReference

556679
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01757
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT01534
stoichiometry: 1.0
species: orot5p c
type: SpeciesReference

ACGK
kinetic law: CDMT00683
product: CDMT00682
product: CDMT00681
reactant: CDMT00680
reactant: CDMT00679
fast: false
reversible: false
name: acetylglutamate kinase
type: Reaction

CDMT01935
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01291
stoichiometry: 1.0
species: for c
type: SpeciesReference

556810
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

4mop c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 4mop
type: Species

CDMT01644
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00678
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01347
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00452
stoichiometry: 1.0
species: rhcys c
type: SpeciesReference

556851
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00937
stoichiometry: 1.0
species: pap c
type: SpeciesReference

CDMT01686
stoichiometry: 0.036803
species: datp c
type: SpeciesReference

CDMT00117
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556783
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01497
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01605
stoichiometry: 1.0
species: uacgam c
type: SpeciesReference

CDMT00877
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556639
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01533
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01645
stoichiometry: 1.0
species: cbasp c
type: SpeciesReference

DMATT
kinetic law: CDMT01205
product: CDMT01204
product: CDMT01203
reactant: CDMT01202
reactant: CDMT01201
fast: false
reversible: false
name: dimethylallyltranstransferase
type: Reaction

CDMT01029
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01758
stoichiometry: 1.0
species: 3pg c
type: SpeciesReference

CDMT01290
stoichiometry: 1.0
species: 25drapp c
type: SpeciesReference

CDMT01933
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

CDMT01759
stoichiometry: 1.0
species: atp c
type: SpeciesReference

EF lys 45 L 40 c 41
kinetic law: CDMT01442
reactant: CDMT01440
fast: false
reversible: false
name: Lysine exchange
type: Reaction

gam1p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: gam1p
type: Species

CDMT00679
stoichiometry: 1.0
species: acglu c
type: SpeciesReference

CDMT00936
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01604
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

556850
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDPMEK
type: Reaction
product: CDMT02084
reactant: CDMT02081
fast: false
reversible: false
product: CDMT02083
name: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
kinetic law: CDMT02085
reactant: CDMT02080
product: CDMT02082

CDMT01348
stoichiometry: 1.0
species: aspsa c
type: SpeciesReference

556784
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00118
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01687
stoichiometry: 45.7318
species: atp c
type: SpeciesReference

CDMT01689
stoichiometry: 0.00215
species: nad c
type: SpeciesReference

CDMT00338
stoichiometry: 1.0
species: accoa c
type: SpeciesReference

CDMT00112
stoichiometry: 1.0
species: pep c
type: SpeciesReference

CDMT01135
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

gdp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: gdp
type: Species

556801
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556470
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556583
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01923
stoichiometry: 1.0
species: coa c
type: SpeciesReference

CDMT01463
stoichiometry: 1.0
species: ins c
type: SpeciesReference

DHDPS
fast: false
reactant: CDMT01348
reactant: CDMT01349
name: dihydrodipicolinate synthase
type: Reaction
reversible: false
kinetic law: CDMT01353
product: CDMT01351
product: CDMT01352
product: CDMT01350

CDMT00455
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01288
stoichiometry: 1.0
species: gtp c
type: SpeciesReference

CDMT00292
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556559
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01870
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

o2 c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: o2
type: Species

CDMT01924
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01249
stoichiometry: 1.0
species: f6p c
type: SpeciesReference

CDMT00730
stoichiometry: 1.0
species: atp c
type: SpeciesReference

ribflv c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ribflv
type: Species

DUTPDP
product: CDMT02118
kinetic law: CDMT02119
reversible: false
reactant: CDMT02115
fast: false
type: Reaction
reactant: CDMT02114
product: CDMT02116
name: dUTP diphosphatase
product: CDMT02117

CDMT00414
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

fdp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: fdp
type: Species

CHORM
kinetic law: CDMT00973
product: CDMT00972
reactant: CDMT00971
fast: false
reversible: false
name: chorismate mutase
type: Reaction

TMDS
kinetic law: CDMT01369
product: CDMT01368
product: CDMT01367
reactant: CDMT01366
reactant: CDMT01365
fast: false
reversible: false
name: thymidylate synthase
type: Reaction

CDMT02128
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00497
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01289
stoichiometry: 3.0
species: h2o c
type: SpeciesReference

CDMT00337
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556700
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01136
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01349
stoichiometry: 1.0
species: pyr c
type: SpeciesReference

CDMT01688
stoichiometry: 0.001
species: amp c
type: SpeciesReference

556781
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01462
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00111
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT00293
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01248
stoichiometry: 1.0
species: e4p c
type: SpeciesReference

CDMT01871
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

atp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: atp
type: Species

CDMT00496
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

NADH6pp
reactant: CDMT02091
reactant: CDMT02090
reversible: false
product: CDMT02093
type: Reaction
product: CDMT02092
reactant: CDMT02089
fast: false
kinetic law: CDMT02095
product: CDMT02094
name: NADH dehydrogenase (ubiquinone-8 & 3.5 protons) (periplasm)

556800
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02066
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00415
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

PGAMT
kinetic law: CDMT01278
product: CDMT01277
reactant: CDMT01276
fast: false
reversible: false
name: phosphoglucosamine mutase
type: Reaction

EF Biomass 40 c 41
kinetic law: CDMT01992
reactant: CDMT01990
fast: false
reversible: false
name: L-Valine exchange
type: Reaction

CDMT00520
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT02127
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00417
stoichiometry: 1.0
species: atp c
type: SpeciesReference

CDMT01465
stoichiometry: 1.0
species: hxan c
type: SpeciesReference

CDMT00114
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01137
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00294
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556803
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01570
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

DHQD
kinetic law: CDMT00675
product: CDMT00674
product: CDMT00673
reactant: CDMT00672
fast: false
reversible: false
name: 3-dehydroquinate dehydratase
type: Reaction

556780
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556581
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00457
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CYTBO3pp
product: CDMT01790
fast: false
type: Reaction
reversible: false
reactant: CDMT01787
kinetic law: CDMT01791
reactant: CDMT01785
product: CDMT01788
name: cytochrome oxidase bo3 (ubiquinol-8: 2.5 protons) (periplasm)
product: CDMT01789
reactant: CDMT01786

UDCPDPS
kinetic law: CDMT00448
product: CDMT00447
product: CDMT00446
reactant: CDMT00445
reactant: CDMT00444
fast: false
reversible: false
name: Undecaprenyl diphosphate synthase
type: Reaction

METS
reversible: false
reactant: CDMT00595
product: CDMT00598
product: CDMT00599
name: methionine synthase
fast: false
kinetic law: CDMT00600
product: CDMT00597
type: Reaction
reactant: CDMT00596

CDMT00080
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01926
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556742
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556518
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

xu5p 45 D c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: xu5p-D
type: Species

CDMT00732
stoichiometry: 1.0
species: dann c
type: SpeciesReference

CDMT00521
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01872
stoichiometry: 1.0
species: 3mob c
type: SpeciesReference

CDMT00416
stoichiometry: 1.0
species: ala 45 B c
type: SpeciesReference

CDMT00418
stoichiometry: 1.0
species: pant 45 R c
type: SpeciesReference

CDMT00113
stoichiometry: 1.0
species: 2dda7p c
type: SpeciesReference

CDMT00339
stoichiometry: 1.0
species: gam1p c
type: SpeciesReference

CDMT00456
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

VGRO
reactant: CDMT01653
product: CDMT01698
type: Reaction
reactant: CDMT01686
reactant: CDMT01678
reactant: CDMT01674
reactant: CDMT01669
reactant: CDMT01688
reactant: CDMT01684
reactant: CDMT01676
reactant: CDMT01657
reactant: CDMT01672
reactant: CDMT01693
reactant: CDMT01664
reactant: CDMT01660
reactant: CDMT01681
reactant: CDMT01655
reactant: CDMT01691
product: CDMT01697
reversible: false
reactant: CDMT01668
reactant: CDMT01689
reactant: CDMT01685
reactant: CDMT01659
reactant: CDMT01656
reactant: CDMT01695
reactant: CDMT01692
reactant: CDMT01666
reactant: CDMT01662
reactant: CDMT01683
name: biomass reaction
reactant: CDMT01654
reactant: CDMT01690
reactant: CDMT01671
product: CDMT01696
kinetic law: CDMT01700
product: CDMT01699
reactant: CDMT01687
reactant: CDMT01658
reactant: CDMT01679
reactant: CDMT01694
reactant: CDMT01675
reactant: CDMT01667
reactant: CDMT01682
reactant: CDMT01663
reactant: CDMT01677
reactant: CDMT01673
reactant: CDMT01670
reactant: CDMT01665
reactant: CDMT01680
reactant: CDMT01661
fast: false

3ig3p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 3ig3p
type: Species

CDMT01464
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT00295
stoichiometry: 1.0
species: fum c
type: SpeciesReference

23dhmb c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 23dhmb
type: Species

SDPDS
kinetic law: CDMT01166
product: CDMT01165
product: CDMT01164
reactant: CDMT01163
reactant: CDMT01162
fast: false
reversible: false
name: succinyl-diaminopimelate desuccinylase
type: Reaction

CDMT01927
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00081
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556741
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02068
stoichiometry: 1.0
species: dhpt c
type: SpeciesReference

UP hcys 45 L 40 c 41
kinetic law: CDMT01884
product: CDMT01883
fast: false
reversible: false
name: hcys-L exchange
type: Reaction

c
constant: true
units: volume
size: 1.0
spatial dimensions: 3.0
name: _c_
type: Compartment

CDMT00494
stoichiometry: 1.0
species: sl2a6o c
type: SpeciesReference

CDMT00522
stoichiometry: 1.0
species: gdp c
type: SpeciesReference

CDMT01873
stoichiometry: 1.0
species: accoa c
type: SpeciesReference

CDMT01530
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

556702
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

UP asp 45 L 40 c 41
kinetic law: CDMT00269
product: CDMT00268
fast: false
reversible: false
name: asp-L uptake
type: Reaction

CDMT02129
stoichiometry: 1.0
species: nadph c
type: SpeciesReference

CDMT00731
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

CDMT00082
stoichiometry: 1.0
species: paps c
type: SpeciesReference

CDMT00459
stoichiometry: 1.0
species: h c
type: SpeciesReference

GTHS
type: Reaction
fast: false
product: CDMT01017
reactant: CDMT01012
product: CDMT01014
reactant: CDMT01013
reversible: false
kinetic law: CDMT01018
reactant: CDMT01011
product: CDMT01015
product: CDMT01016
name: glutathione synthetase

gmhep17bp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: gmhep17bp
type: Species

CDMT01139
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT00419
stoichiometry: 1.0
species: amp c
type: SpeciesReference

556587
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01987
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01874
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT00734
stoichiometry: 1.0
species: dtbt c
type: SpeciesReference

CDMT00941
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556516
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01928
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01245
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

PPA
kinetic law: CDMT01723
product: CDMT01722
product: CDMT01721
reactant: CDMT01720
reactant: CDMT01719
fast: false
reversible: false
name: inorganic diphosphatase
type: Reaction

556804
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00458
stoichiometry: 1.0
species: 26dap 45 M c
type: SpeciesReference

UPP3MT
type: Reaction
reversible: false
reactant: CDMT00172
kinetic law: CDMT00176
name: uroporphyrinogen methyltransferase
product: CDMT00175
product: CDMT00173
reactant: CDMT00171
product: CDMT00174
fast: false

CDMT00083
stoichiometry: 1.0
species: trdrd c
type: SpeciesReference

CDMT01285
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

UP pg EC 40 c 41
kinetic law: CDMT00788
product: CDMT00787
fast: false
reversible: false
name: pg_EC uptake
type: Reaction

CDMT01466
stoichiometry: 1.0
species: r1p c
type: SpeciesReference

2p4c2me c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 2p4c2me
type: Species

EF thr 45 L 40 c 41
kinetic law: CDMT00838
reactant: CDMT00836
fast: false
reversible: false
name: Threonine exchange
type: Reaction

CDMT01988
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00733
stoichiometry: 1.0
species: adp c
type: SpeciesReference

CDMT00942
stoichiometry: 1.0
species: 2ippm c
type: SpeciesReference

prpp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: prpp
type: Species

CDMT01244
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01875
stoichiometry: 1.0
species: 3c3hmp c
type: SpeciesReference

556556
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

asp 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: asp-L
type: Species

CDMT02062
stoichiometry: 1.0
species: nadh c
type: SpeciesReference

CDMT01929
stoichiometry: 1.0
species: aspsa c
type: SpeciesReference

556673
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01286
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00110
stoichiometry: 1.0
species: e4p c
type: SpeciesReference

556807
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00298
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00084
stoichiometry: 2.0
species: h c
type: SpeciesReference

CDMT00671
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556585
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

5aprbu c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 5aprbu
type: Species

CDMT01469
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556514
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00336
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

556670
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01876
stoichiometry: 1.0
species: coa c
type: SpeciesReference

CDMT01989
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

2dda7p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 2dda7p
type: Species

CDMT02065
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01247
stoichiometry: 1.0
species: s7p c
type: SpeciesReference

556806
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01287
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00085
stoichiometry: 1.0
species: pap c
type: SpeciesReference

CDMT00299
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00335
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00670
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00736
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01468
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00498
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

DBTS
reactant: CDMT00732
product: CDMT00735
reversible: false
reactant: CDMT00731
reactant: CDMT00730
type: Reaction
fast: false
product: CDMT00736
product: CDMT00734
product: CDMT00733
name: dethiobiotin synthase
kinetic law: CDMT00737

CDMT00735
stoichiometry: 3.0
species: h c
type: SpeciesReference

CDMT00940
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

ACGS
name: N-acetylglutamate synthase
fast: false
kinetic law: CDMT00609
reactant: CDMT00605
reactant: CDMT00604
product: CDMT00608
type: Reaction
product: CDMT00607
reversible: false
product: CDMT00606

CDMT01877
stoichiometry: 1.0
species: h c
type: SpeciesReference

556671
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

ANPRT
kinetic law: CDMT01821
product: CDMT01820
product: CDMT01819
reactant: CDMT01818
reactant: CDMT01817
fast: false
reversible: false
name: anthranilate phosphoribosyltransferase
type: Reaction

556554
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01246
stoichiometry: 1.0
species: g3p c
type: SpeciesReference

CDMT02064
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01819
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT01301
stoichiometry: 1.0
species: hco3 c
type: SpeciesReference

CDMT00827
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

556446
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02120
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556848
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00625
units: mmol per gDW per hr
value: 5.0
type: LocalParameter

EX pi 40 p 41
kinetic law: CDMT01522
product: CDMT01521
fast: false
reversible: false
name: pi exchange
type: Reaction

CDMT01983
stoichiometry: 1.0
species: ala 45 L c
type: SpeciesReference

PPM
kinetic law: CDMT02125
product: CDMT02124
reactant: CDMT02123
fast: false
reversible: false
name: phosphopentomutase
type: Reaction

556512
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00626
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01576
stoichiometry: 2.0
species: nadh c
type: SpeciesReference

556809
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556478
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01181
stoichiometry: 1.0
species: argsuc c
type: SpeciesReference

CDMT00225
stoichiometry: 1.0
species: 4r5au c
type: SpeciesReference

CDMT01390
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00528
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

IGPS
reactant: CDMT01145
fast: false
kinetic law: CDMT01149
type: Reaction
reversible: false
product: CDMT01147
product: CDMT01148
product: CDMT01146
name: indole-3-glycerol-phosphate synthase
reactant: CDMT01144

CDMT00187
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00568
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

UP uppg3
kinetic law: CDMT00402
product: CDMT00401
fast: false
reversible: false
name: uppg3 exchange
type: Reaction

556748
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01302
stoichiometry: 2.0
species: adp c
type: SpeciesReference

3c2hmp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 3c2hmp
type: Species

CDMT00828
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01879
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01240
stoichiometry: 1.0
species: 5mtr c
type: SpeciesReference

PTPATi
reactant: CDMT00354
kinetic law: CDMT00358
product: CDMT00356
reactant: CDMT00353
reversible: false
product: CDMT00357
name: pantetheine-phosphate adenylyltransferase
type: Reaction
reactant: CDMT00355
fast: false

CDMT01182
stoichiometry: 1.0
species: arg 45 L c
type: SpeciesReference

ACODA
kinetic law: CDMT00584
product: CDMT00583
product: CDMT00582
reactant: CDMT00581
reactant: CDMT00580
fast: false
reversible: false
name: acetylornithine deacetylase
type: Reaction

CDMT01984
stoichiometry: 1.0
species: btn c
type: SpeciesReference

CDMT00624
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01575
stoichiometry: 1.0
species: his 45 L c
type: SpeciesReference

CDMT00529
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00224
stoichiometry: 2.0
species: dmlz c
type: SpeciesReference

PDH
reactant: CDMT01399
product: CDMT01400
reactant: CDMT01397
kinetic law: CDMT01403
product: CDMT01401
reactant: CDMT01398
type: Reaction
reversible: false
fast: false
product: CDMT01402
name: pyruvate dehydrogenase

UP pan4p
kinetic law: CDMT00318
product: CDMT00317
fast: false
reversible: false
name: pan4p exchange
type: Reaction

CDMT00188
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556747
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00829
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556444
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

skm c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: skm
type: Species

clpn EC c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: clpn_EC
type: Species

CDMT02122
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01303
stoichiometry: 1.0
species: cbp c
type: SpeciesReference

CDMT01985
stoichiometry: 2.0
species: h c
type: SpeciesReference

CDMT01243
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01392
stoichiometry: 1.0
species: o2 c
type: SpeciesReference

556476
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00780
stoichiometry: 1.0
species: atp c
type: SpeciesReference

556510
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00189
stoichiometry: 1.0
species: 2mecdp c
type: SpeciesReference

CDMT00628
stoichiometry: 1.0
species: glu 45 L c
type: SpeciesReference

CDMT01578
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02020
stoichiometry: 1.0
species: f6p c
type: SpeciesReference

CDMT02061
stoichiometry: 1.0
species: h c
type: SpeciesReference

BTS2
type: Reaction
reactant: CDMT01981
reversible: false
product: CDMT01983
product: CDMT01985
name: biotin synthase (ala-L producing)
fast: false
product: CDMT01984
reactant: CDMT01982
kinetic law: CDMT01986

UP glu 45 L 40 c 41
kinetic law: CDMT00501
product: CDMT00500
fast: false
reversible: false
name: glu-L exchange
type: Reaction

CDMT01304
stoichiometry: 1.0
species: glu 45 L c
type: SpeciesReference

mnl p
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: p
name: mnl
type: Species

CDMT02121
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01180
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02021
stoichiometry: 1.0
species: gln 45 L c
type: SpeciesReference

CDMT00226
stoichiometry: 1.0
species: ribflv c
type: SpeciesReference

CDMT00627
stoichiometry: 1.0
species: glu 45 D c
type: SpeciesReference

accoa c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: accoa
type: Species

CDMT02060
stoichiometry: 1.0
species: f6p c
type: SpeciesReference

CDMT00569
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01130
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01185
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT01708
stoichiometry: 1.0
species: ppi c
type: SpeciesReference

CDMT00523
stoichiometry: 1.0
species: trdrd c
type: SpeciesReference

AGPR
reactant: CDMT01063
type: Reaction
reactant: CDMT01065
reactant: CDMT01064
reversible: false
product: CDMT01068
fast: false
product: CDMT01066
product: CDMT01067
name: N-acetyl-g-glutamyl-phosphate reductase
kinetic law: CDMT01069

CDMT00410
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

mlthf c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: mlthf
type: Species

CDMT00493
stoichiometry: 1.0
species: coa c
type: SpeciesReference

556744
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02124
stoichiometry: 1.0
species: r5p c
type: SpeciesReference

thr 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: thr-L
type: Species

CDMT01305
stoichiometry: 2.0
species: h c
type: SpeciesReference

CDMT01815
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00183
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT00564
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01131
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00822
stoichiometry: 1.0
species: amet c
type: SpeciesReference

CDMT01572
stoichiometry: 1.0
species: histd c
type: SpeciesReference

CDMT00229
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00003
stoichiometry: 1.0
species: thf c
type: SpeciesReference

2cpr5p c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 2cpr5p
type: Species

DHPPDA2
reactant: CDMT00573
product: CDMT00574
fast: false
type: Reaction
reactant: CDMT00572
reversible: false
reactant: CDMT00571
kinetic law: CDMT00576
name: diaminohydroxyphosphoribosylaminopryrimidine deaminase (25drapp)
product: CDMT00575

cbp c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: cbp
type: Species

556474
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01798
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

DHORD2
kinetic law: CDMT01910
product: CDMT01909
product: CDMT01908
reactant: CDMT01907
reactant: CDMT01906
fast: false
reversible: false
name: dihydoorotic acid dehydrogenase (quinone8)
type: Reaction

CDMT00524
stoichiometry: 1.0
species: dgdp c
type: SpeciesReference

CDMT00620
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00411
stoichiometry: 1.0
species: nh4 c
type: SpeciesReference

CDMT01186
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

ala 45 L c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: ala-L
type: Species

CDMT02123
stoichiometry: 1.0
species: r1p c
type: SpeciesReference

CDMT00824
stoichiometry: 1.0
species: ametam c
type: SpeciesReference

CDMT01980
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00492
stoichiometry: 1.0
species: thdp c
type: SpeciesReference

CDMT01816
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01306
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01068
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01571
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT00823
stoichiometry: 1.0
species: h c
type: SpeciesReference

CDMT01132
stoichiometry: 1.0
species: akg c
type: SpeciesReference

CDMT00563
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT00184
stoichiometry: 1.0
species: phom c
type: SpeciesReference

CDMT00002
stoichiometry: 1.0
species: ser 45 L c
type: SpeciesReference

CDMT00228
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT02126
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01420
stoichiometry: 1.0
species: pi c
type: SpeciesReference

CDMT01706
stoichiometry: 1.0
species: pheme c
type: SpeciesReference

CDMT00525
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01183
stoichiometry: 1.0
species: fum c
type: SpeciesReference

CDMT01817
stoichiometry: 1.0
species: anth c
type: SpeciesReference

CDMT00491
stoichiometry: 1.0
species: succoa c
type: SpeciesReference

CDMT01981
stoichiometry: 1.0
species: cys 45 L c
type: SpeciesReference

CDMT00825
stoichiometry: 1.0
species: co2 c
type: SpeciesReference

556448
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CHORS
kinetic law: CDMT01007
product: CDMT01006
product: CDMT01005
reactant: CDMT01004
fast: false
reversible: false
name: chorismate synthase
type: Reaction

CDMT00566
stoichiometry: 1.0
species: g3p c
type: SpeciesReference

CDMT01574
stoichiometry: 3.0
species: h c
type: SpeciesReference

CDMT01461
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

CDMT01308
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

556472
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01067
stoichiometry: 1.0
species: nadp c
type: SpeciesReference

substance
unit: CDMT02138
name: substance
type: SBMLUnitsDef

amet c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: amet
type: Species

CDMT00005
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

CDMT01707
stoichiometry: 1.0
species: hemeO c
type: SpeciesReference

CDMT00622
stoichiometry: 1.0
species: fe2 c
type: SpeciesReference

CDMT01982
stoichiometry: 1.0
species: dtbt c
type: SpeciesReference

4r5au c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: 4r5au
type: Species

CDMT00413
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT00526
stoichiometry: 1.0
species: trdox c
type: SpeciesReference

CDMT00490
stoichiometry: 1.0
species: h2o c
type: SpeciesReference

SERAT
kinetic law: CDMT00617
product: CDMT00616
product: CDMT00615
reactant: CDMT00614
reactant: CDMT00613
fast: false
reversible: false
name: serine O-acetyltransferase
type: Reaction

length
unit: CDMT02141
name: length
type: SBMLUnitsDef

TMPK
kinetic law: CDMT00959
product: CDMT00958
product: CDMT00957
reactant: CDMT00956
reactant: CDMT00955
fast: false
reversible: false
name: thiamine-phosphate kinase
type: Reaction

556745
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01421
stoichiometry: 1.0
species: ugmda c
type: SpeciesReference

CDMT01818
stoichiometry: 1.0
species: prpp c
type: SpeciesReference

CDMT01573
stoichiometry: 2.0
species: nad c
type: SpeciesReference

CDMT00565
stoichiometry: 1.0
species: dhap c
type: SpeciesReference

CDMT01460
units: mmol per gDW per hr
value: -1.0E30
type: LocalParameter

CDMT00186
units: mmol per gDW per hr
value: 0.0
type: LocalParameter

CDMT01066
stoichiometry: 1.0
species: acg5sa c
type: SpeciesReference

CDMT01309
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter

HEMEOS
reactant: CDMT01704
reactant: CDMT01705
type: Reaction
fast: false
product: CDMT01708
product: CDMT01707
reversible: false
kinetic law: CDMT01709
name: Heme O synthase
reactant: CDMT01706

uama c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: c
name: uama
type: Species

CDMT00004
stoichiometry: 1.0
species: gly c
type: SpeciesReference

CDMT01799
units: mmol per gDW per hr
value: 1.0E30
type: LocalParameter