307627
value: 0.0
type: LocalParameter

308876
units: 756574
value: 999999.0
type: LocalParameter

302027
reactant: 758303
type: Reaction
reversible: false
product: 758340
fast: false
kinetic law: 758352
name: glutamine-fructose-6-phosphate_transaminase_(isomerizing)
reactant: 758316
product: 758328
notes: Abbreviation: R_GF6PTA EC Number: 2.6.1.16 SUBSYSTEM: Carbohydrates_AminosugarsMetabolism ; AminoAcids_GluMetabolism Equation: M_f6p[c] + M_gln_L[c] --> M_gam6p[c] + M_glu_L[c] genes: LOCUS:PF10_0245# proteins: GENE ASSOCIATION: (PF10_0245)

758909
stoichiometry: 1.0
species: 300522
type: SpeciesReference

813580
stoichiometry: 1.0
species: 301402
type: SpeciesReference

815169
stoichiometry: 1.0
species: 300338
type: SpeciesReference

791711
stoichiometry: 1.0
species: 300903
type: SpeciesReference

767918
stoichiometry: 1.0
species: 301380
type: SpeciesReference

303419
reversible: false
product: 792181
product: 792169
name: phospholipase_A2
notes: Abbreviation: R_PLIPA2E140pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pe140[c] --> M_1agpe140[c] + M_h[c] + M_ttdca[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
type: Reaction
product: 792193
fast: false
reactant: 792145
kinetic law: 792205
reactant: 792157

758497
stoichiometry: 1.0
species: 300518
type: SpeciesReference

776692
stoichiometry: 0.1
species: 301054
type: SpeciesReference

310551
units: 756622
value: 0.0
type: LocalParameter

303956
product: 803986
fast: false
name: cytidylate_kinase
product: 803998
kinetic law: 804010
reactant: 803974
type: Reaction
reversible: true
reactant: 803962
notes: Abbreviation: R_UMPK EC Number: 2.7.4.14 SUBSYSTEM: Nucleotides_PyrimidineMetabolism Equation: M_atp[c] + M_ump[c] <==> M_adp[c] + M_udp[c] genes: LOCUS:PFA0555c# proteins: GENE ASSOCIATION: (PFA0555c)

789703
stoichiometry: 1.0
species: 300777
type: SpeciesReference

308724
value: 0.0
type: LocalParameter

307793
units: 756574
value: 999999.0
type: LocalParameter

775926
stoichiometry: 1.0
species: 300576
type: SpeciesReference

785871
stoichiometry: 1.0
species: 300332
type: SpeciesReference

306102
units: 756574
value: 999999.0
type: LocalParameter

779368
stoichiometry: 1.0
species: 300909
type: SpeciesReference

806829
stoichiometry: 1.0
species: 300913
type: SpeciesReference

307498
units: 756574
value: 0.0
type: LocalParameter

307771
units: 756574
value: 999999.0
type: LocalParameter

781274
stoichiometry: 2.0
species: 301140
type: SpeciesReference

300268
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 6-Pyruvoyl-5,6,7,8-tetrahydropterin_C9H11N5O3
type: Species

310279
units: 756574
value: 999999.0
type: LocalParameter

301621
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Threonine_C4H9NO3
type: Species

305886
value: 0.0
type: LocalParameter

305579
value: 0.0
type: LocalParameter

310550
value: 0.0
type: LocalParameter

794997
stoichiometry: 1.0
species: 301358
type: SpeciesReference

300682
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: dUDP_C9H11N2O11P2
type: Species

306946
units: 756622
value: 0.0
type: LocalParameter

307625
units: 756574
value: 999999.0
type: LocalParameter

305021
value: 0.0
type: LocalParameter

302740
product: 775395
product: 775358
product: 775346
product: 775371
product: 775322
product: 775419
product: 775383
product: 775334
reactant: 775298
product: 775310
notes: Abbreviation: R_lipid2 EC Number: SUBSYSTEM: Lipids Equation: M_Rtotalcoa[c] <==> M_dcacoa[c] + M_ddcacoa[c] + M_tdcoa[c] + M_tdecoa[c] + M_pmtcoa[c] + M_hdcoa[c] + M_stcoa[c] + M_odecoa[c] + M_hxcoa[c] + M_occoa[c] genes: proteins: GENE ASSOCIATION:
type: Reaction
product: 775407
kinetic law: 775431
reversible: true
name: R_lipid2
fast: false

307796
units: 756622
value: 0.0
type: LocalParameter

306839
units: 756574
value: 999999.0
type: LocalParameter

308874
units: 756622
value: 0.0
type: LocalParameter

811702
stoichiometry: 1.0
species: 300572
type: SpeciesReference

307770
units: 756574
value: 0.0
type: LocalParameter

308721
units: 756574
value: -999999.0
type: LocalParameter

302029
type: Reaction
product: 758436
product: 758424
notes: Abbreviation: R_GLUCYS EC Number: 6.3.2.2 SUBSYSTEM: Redox_RedoxMetabolism ; AminoAcids_GluMetabolism Equation: M_atp[c] + M[c] ys_L[c] + M_glu_L[c] --> M_adp[c] + M_glucys[c] + M_h[c] + M_pi[c] genes: LOCUS:PFI0925w# proteins: GENE ASSOCIATION: (PFI0925w)
reversible: false
kinetic law: 758448
reactant: 758376
fast: false
reactant: 758388
reactant: 758364
product: 758412
name: Glutamate-cysteine_ligase
product: 758400

307110
units: 756574
value: 0.0
type: LocalParameter

773164
stoichiometry: 1.0
species: 301888
type: SpeciesReference

759874
stoichiometry: 1.0
species: 300346
type: SpeciesReference

772601
stoichiometry: 1.0
species: 300875
type: SpeciesReference

780632
stoichiometry: 1.0
species: 301212
type: SpeciesReference

788752
stoichiometry: 1.0
species: 300851
type: SpeciesReference

304909
value: 0.0
type: LocalParameter

310480
units: 756622
value: 0.0
type: LocalParameter

305889
units: 756622
value: 0.0
type: LocalParameter

306943
units: 756574
value: 999999.0
type: LocalParameter

805186
stoichiometry: 1.0
species: 300996
type: SpeciesReference

800317
stoichiometry: 1.0
species: 300676
type: SpeciesReference

307624
units: 756574
value: 0.0
type: LocalParameter

308722
units: 756574
value: 999999.0
type: LocalParameter

307795
value: 0.0
type: LocalParameter

308875
units: 756574
value: 0.0
type: LocalParameter

306100
units: 756574
value: 0.0
type: LocalParameter

304190
reactant: 808362
notes: Abbreviation: R_PTRCt2 EC Number: SUBSYSTEM: Transport Equation: M_h[e] + M_ptrc[e] --> M_h[c] + M_ptrc[c] genes: proteins: GENE ASSOCIATION:
reactant: 808374
product: 808386
type: Reaction
fast: false
name: R_PTRCt2
reversible: false
product: 808398
kinetic law: 808410

774281
stoichiometry: 1.0
species: 301535
type: SpeciesReference

781346
stoichiometry: 1.0
species: 301695
type: SpeciesReference

301623
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Threonyl_tRNA_Thr_C4H8NO2R
type: Species

300680
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: dTTP_C10H13N2O14P3
type: Species

773845
stoichiometry: 1.0
species: 301230
type: SpeciesReference

306944
value: 0.0
type: LocalParameter

310552
units: 756574
value: -999999.0
type: LocalParameter

303959
reversible: false
reactant: 804022
product: 804058
type: Reaction
fast: false
kinetic law: 804082
notes: Abbreviation: R_UP4UH1 EC Number: 3.6.1.17 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; Nucleotides_PurineMetabolism Equation: M_up4u[c] + M_h2o[c] --> M_ump[c] + M_utp[c] + (2.0) M_h[c] genes: LOCUS:PFE1035c# proteins: GENE ASSOCIATION: (PFE1035c)
name: bis(5'-nucleosyl)-tetraphosphatase_(asymmetrical)
product: 804070
product: 804046
reactant: 804034

304511
kinetic law: 813386
product: 813374
reactant: 813362
notes: Abbreviation: R_URAt EC Number: SUBSYSTEM: Transport_base Equation: M_ura[e] <==> M_ura[c] genes: LOCUS:PFA0160c# LOCUS:MAL8P1_32# LOCUS:PF13_0252# LOCUS:PF14_0662# proteins: GENE ASSOCIATION: (PFA0160c) or (MAL8P1_32) or (PF13_0252) or (PF14_0662)
fast: false
reversible: true
name: R_URAt
type: Reaction

817791
stoichiometry: 0.3566
species: 301000
type: SpeciesReference

307112
units: 756574
value: 999999.0
type: LocalParameter

301625
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Thymidine_C10H14N2O5
type: Species

302582
kinetic law: 773176
product: 773164
reactant: 773152
notes: Abbreviation: R_EX_ins_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_ins <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_ins_e_
type: Reaction

765268
stoichiometry: 1.0
species: 300350
type: SpeciesReference

772236
stoichiometry: 1.0
species: 300759
type: SpeciesReference

308872
value: 0.0
type: LocalParameter

781587
stoichiometry: 1.0
species: 301212
type: SpeciesReference

805489
stoichiometry: 1.0
species: 301569
type: SpeciesReference

306105
units: 756574
value: 0.0
type: LocalParameter

806977
stoichiometry: 1.0
species: 300707
type: SpeciesReference

757933
stoichiometry: 1.0
species: 301160
type: SpeciesReference

307623
units: 756622
value: 0.0
type: LocalParameter

306941
units: 756622
value: 0.0
type: LocalParameter

305576
units: 756574
value: 999999.0
type: LocalParameter

760767
stoichiometry: 1.0
species: 301172
type: SpeciesReference

302891
reversible: false
fast: false
reactant: 779452
kinetic law: 779500
product: 779476
reactant: 779464
reactant: 779440
name: enoyl-[acyl-carrier-protein]_reductase_(NADH)
type: Reaction
notes: Abbreviation: R_EAR140x_ap EC Number: 1.3.1.9 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M_nadh[ap] + M_tmrs2eACP[ap] --> M[m] yrsACP[ap] + M_nad[ap] genes: LOCUS:PFF0730c# proteins: GENE ASSOCIATION: (PFF0730c)
product: 779488

811198
stoichiometry: 1.0
species: 301280
type: SpeciesReference

762685
stoichiometry: 1.0
species: 300719
type: SpeciesReference

310555
value: 0.0
type: LocalParameter

310276
units: 756622
value: 0.0
type: LocalParameter

802996
stoichiometry: 1.0
species: 300911
type: SpeciesReference

305463
units: 756574
value: 0.0
type: LocalParameter

307775
units: 756574
value: 0.0
type: LocalParameter

307494
units: 756574
value: 999999.0
type: LocalParameter

814962
stoichiometry: 1.0
species: 300152
type: SpeciesReference

811569
stoichiometry: 1.0
species: 300332
type: SpeciesReference

307797
units: 756574
value: 0.0
type: LocalParameter

308728
units: 756574
value: 999999.0
type: LocalParameter

806576
stoichiometry: 1.0
species: 300346
type: SpeciesReference

303155
type: Reaction
product: 785799
kinetic law: 785835
reactant: 785775
product: 785811
name: diacylglycerol_kinase
reactant: 785787
fast: false
reversible: false
notes: Abbreviation: R_DAGK161 EC Number: 2.7.1.107 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_12dgr161[c] + M_atp[c] --> M_adp[c] + M_h[c] + M_pa161[c] genes: LOCUS:PF14_0681# LOCUS:PFI1485c# proteins: GENE ASSOCIATION: (PF14_0681) or (PFI1485c)
product: 785823

306942
units: 756574
value: -999999.0
type: LocalParameter

300686
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Deoxyuridine_C9H12N2O5
type: Species

757530
stoichiometry: 1.0
species: 301416
type: SpeciesReference

763433
stoichiometry: 1.0
species: 301342
type: SpeciesReference

310554
units: 756574
value: 999999.0
type: LocalParameter

309492
units: 756574
value: 999999.0
type: LocalParameter

797649
stoichiometry: 1.0
species: 300903
type: SpeciesReference

305462
units: 756622
value: 0.0
type: LocalParameter

788220
stoichiometry: 1.0
species: 300777
type: SpeciesReference

310275
value: 0.0
type: LocalParameter

303521
type: Reaction
product: 794588
reactant: 794551
product: 794576
fast: false
reactant: 794564
kinetic law: 794600
notes: Abbreviation: R_PGPP141pp EC Number: 3.1.3.27 SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M_h2o[c] + M_pgp141[c] --> M_pg141[c] + M_pi[c] genes: proteins: GENE ASSOCIATION:
name: phosphatidylglycerophosphatase
reversible: false

307497
units: 756622
value: 0.0
type: LocalParameter

301627
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Thymidine_C10H14N2O5
type: Species

303158
reactant: 785859
type: Reaction
notes: Abbreviation: R_DAGK180 EC Number: 2.7.1.107 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_12dgr180[c] + M_atp[c] --> M_adp[c] + M_h[c] + M_pa180[c] genes: LOCUS:PF14_0681# LOCUS:PFI1485c# proteins: GENE ASSOCIATION: (PF14_0681) or (PFI1485c)
product: 785871
reversible: false
reactant: 785847
kinetic law: 785907
product: 785895
name: diacylglycerol_kinase
product: 785883
fast: false

307621
value: 0.0
type: LocalParameter

784259
stoichiometry: 1.0
species: 301008
type: SpeciesReference

303416
type: Reaction
reactant: 792073
product: 792097
product: 792109
notes: Abbreviation: R_PLIPA2E120pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pe120[c] --> M_1agpe120[c] + M_ddca[c] + M_h[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
name: phospholipase_A2
reactant: 792085
reversible: false
kinetic law: 792133
product: 792121
fast: false

307774
units: 756622
value: 0.0
type: LocalParameter

306103
value: 0.0
type: LocalParameter

761708
stoichiometry: 1.0
species: 300370
type: SpeciesReference

310558
units: 756574
value: -999999.0
type: LocalParameter

308725
units: 756622
value: 0.0
type: LocalParameter

310331
units: 756622
value: 0.0
type: LocalParameter

799677
stoichiometry: 1.0
species: 301012
type: SpeciesReference

774511
stoichiometry: 1.0
species: 301962
type: SpeciesReference

309491
units: 756574
value: -999999.0
type: LocalParameter

798147
stoichiometry: 1.0
species: 301284
type: SpeciesReference

803721
stoichiometry: 1.0
species: 300684
type: SpeciesReference

793767
stoichiometry: 1.0
species: 300510
type: SpeciesReference

304514
kinetic law: 813422
product: 813410
reactant: 813398
notes: Abbreviation: R_URIt EC Number: SUBSYSTEM: Transport_base Equation: M_uri[e] <==> M_uri[c] genes: LOCUS:PFA0160c# LOCUS:MAL8P1_32# LOCUS:PF13_0252# LOCUS:PF14_0662# proteins: GENE ASSOCIATION: (PFA0160c) or (MAL8P1_32) or (PF13_0252) or (PF14_0662)
fast: false
reversible: true
name: R_URIt
type: Reaction

307799
units: 756574
value: 999999.0
type: LocalParameter

803141
stoichiometry: 1.0
species: 300911
type: SpeciesReference

307113
value: 0.0
type: LocalParameter

307620
units: 756574
value: 999999.0
type: LocalParameter

307773
value: 0.0
type: LocalParameter

308871
units: 756574
value: 999999.0
type: LocalParameter

307496
value: 0.0
type: LocalParameter

813434
stoichiometry: 1.0
species: 301751
type: SpeciesReference

308726
units: 756574
value: -999999.0
type: LocalParameter

306104
units: 756622
value: 0.0
type: LocalParameter

310557
units: 756622
value: 0.0
type: LocalParameter

302743
product: 775516
reversible: true
product: 775503
reactant: 775443
product: 775528
product: 775491
product: 775467
kinetic law: 775540
product: 775479
type: Reaction
name: R_lipid3
product: 775455
fast: false
notes: Abbreviation: R_lipid3 EC Number: SUBSYSTEM: Lipids Equation: M_dag[c] <==> M_12dgr120[c] + M_12dgr140[c] + M_12dgr141[c] + M_12dgr160[c] + M_12dgr161[c] + M_12dgr180[c] + M_12dgr181[c] genes: proteins: GENE ASSOCIATION:

310330
value: 0.0
type: LocalParameter

300684
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: dUMP_C9H11N2O8P
type: Species

300961
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: all_trans_Hexaprenyl_diphosphate_C30H49O7P2
type: Species

772065
stoichiometry: 1.0
species: 301828
type: SpeciesReference

309490
units: 756622
value: 0.0
type: LocalParameter

310277
units: 756574
value: -999999.0
type: LocalParameter

769080
stoichiometry: 1.0
species: 301142
type: SpeciesReference

301773
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: 4_Aminobutanoate_C4H9NO2
type: Species

787169
stoichiometry: 1.0
species: 300911
type: SpeciesReference

307491
value: 0.0
type: LocalParameter

305572
units: 756622
value: 0.0
type: LocalParameter

310486
units: 756574
value: -999999.0
type: LocalParameter

310272
units: 756574
value: -999999.0
type: LocalParameter

762794
stoichiometry: 1.0
species: 300783
type: SpeciesReference

306832
units: 756574
value: 999999.0
type: LocalParameter

309384
value: 0.0
type: LocalParameter

300530
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: Coproporphyrinogen_III_C36H40N4O8
type: Species

781695
stoichiometry: 2.0
species: 301146
type: SpeciesReference

762263
stoichiometry: 1.0
species: 300771
type: SpeciesReference

309598
value: 0.0
type: LocalParameter

306109
units: 756622
value: 0.0
type: LocalParameter

300965
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Histidine_C6H9N3O2
type: Species

303152
reversible: false
product: 785738
notes: Abbreviation: R_DAGK160 EC Number: 2.7.1.107 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_12dgr160[c] + M_atp[c] --> M_adp[c] + M_h[c] + M_pa160[c] genes: LOCUS:PF14_0681# LOCUS:PFI1485c# proteins: GENE ASSOCIATION: (PF14_0681) or (PFI1485c)
reactant: 785714
type: Reaction
fast: false
product: 785750
name: diacylglycerol_kinase
reactant: 785702
product: 785726
kinetic law: 785762

301629
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

307221
units: 756574
value: 0.0
type: LocalParameter

309285
value: 0.0
type: LocalParameter

800956
stoichiometry: 1.0
species: 300911
type: SpeciesReference

303410
reactant: 791940
product: 791952
type: Reaction
reversible: false
kinetic law: 791988
name: phospholipase_A2
product: 791976
notes: Abbreviation: R_PLIPA2A180pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa180[c] --> M_1odecg3p[c] + M_h[c] + M_ocdca[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
fast: false
product: 791964
reactant: 791928

772345
stoichiometry: 1.0
species: 300791
type: SpeciesReference

765159
stoichiometry: 1.0
species: 300332
type: SpeciesReference

305999
units: 756622
value: 0.0
type: LocalParameter

803611
stoichiometry: 1.0
species: 300674
type: SpeciesReference

304517
kinetic law: 813459
product: 813447
reactant: 813434
notes: Abbreviation: R_XANt EC Number: SUBSYSTEM: Transport_base Equation: M_xan[e] <==> M_xan[c] genes: LOCUS:PFA0160c# LOCUS:MAL8P1_32# LOCUS:PF13_0252# LOCUS:PF14_0662# proteins: GENE ASSOCIATION: (PFA0160c) or (MAL8P1_32) or (PF13_0252) or (PF14_0662)
fast: false
reversible: true
name: R_XANt
type: Reaction

302894
reactant: 779537
product: 779561
notes: Abbreviation: R_EAR141x_ap EC Number: 1.3.1.9 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M_nadh[ap] + M_t3c7mrseACP[ap] --> M_nad[ap] + M_tdeACP[ap] genes: LOCUS:PFF0730c# proteins: GENE ASSOCIATION: (PFF0730c)
product: 779549
kinetic law: 779573
name: enoyl-[acyl-carrier-protein]_reductase_(NADH)
fast: false
reactant: 779525
reactant: 779512
type: Reaction
reversible: false

310271
units: 756622
value: 0.0
type: LocalParameter

306833
value: 0.0
type: LocalParameter

300963
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
type: Species

300260
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: 6_hydroxymethyl_dihydropterin_C7H9N5O2
type: Species

305466
units: 756574
value: 999999.0
type: LocalParameter

798425
stoichiometry: 1.0
species: 300903
type: SpeciesReference

310485
units: 756622
value: 0.0
type: LocalParameter

776485
stoichiometry: 1.0
species: 300751
type: SpeciesReference

781044
stoichiometry: 2.0
species: 301140
type: SpeciesReference

300835
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: gamma_L_Glutamyl_L_cysteine_C8H13N2O5S
type: Species

310559
units: 756574
value: 999999.0
type: LocalParameter

306520
units: 756574
value: -999999.0
type: LocalParameter

777216
stoichiometry: 1.0
species: 301146
type: SpeciesReference

309597
units: 756574
value: 999999.0
type: LocalParameter

305179
value: 0.0
type: LocalParameter

307220
units: 756622
value: 0.0
type: LocalParameter

304901
value: 0.0
type: LocalParameter

304196
kinetic law: 808507
product: 808495
reactant: 808483
notes: Abbreviation: R_SBT_Dt EC Number: SUBSYSTEM: Transport Equation: M_sbt_D[e] <==> M_sbt_D[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_SBT_Dt
type: Reaction

302139
product: 762456
reactant: 762432
notes: Abbreviation: R_GLYK EC Number: 2.7.1.30 SUBSYSTEM: Carbohydrates_Glycolysis Equation: M_atp[c] + M_glyc[c] --> M_adp[c] + M_glyc3p[c] + M_h[c] genes: LOCUS:PF13_0269# proteins: GENE ASSOCIATION: (PF13_0269)
fast: false
kinetic law: 762492
reactant: 762444
name: glycerol_kinase
reversible: false
product: 762480
product: 762468
type: Reaction

303524
notes: Abbreviation: R_PGPP160 EC Number: 3.1.3.27 SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M_h2o[c] + M_pgp160[c] --> M_pg160[c] + M_pi[c] genes: proteins: GENE ASSOCIATION:
reversible: false
reactant: 794624
name: phosphatidylglycerophosphatase
product: 794636
reactant: 794612
kinetic law: 794660
product: 794648
type: Reaction
fast: false

768039
stoichiometry: 4.0
species: 301158
type: SpeciesReference

777639
stoichiometry: 1.0
species: 300909
type: SpeciesReference

303212
name: Phosphatidylserine_decarboxylase
reactant: 787084
reversible: false
notes: Abbreviation: R_PSD181 EC Number: 4.1.1.65 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_h[c] + M_ps181[c] --> M[c] o2[c] + M_pe181[c] genes: LOCUS:PFI1370c# proteins: GENE ASSOCIATION: (PFI1370c)
fast: false
product: 787096
reactant: 787072
type: Reaction
product: 787108
kinetic law: 787120

310121
value: 0.0
type: LocalParameter

780057
stoichiometry: 1.0
species: 301128
type: SpeciesReference

301775
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Acetate_C2H3O2
type: Species

302897
reversible: false
product: 779621
notes: Abbreviation: R_EAR160x_ap EC Number: 1.3.1.9 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M_nadh[ap] + M_tpalm2eACP[ap] --> M_nad[ap] + M_palmACP[ap] genes: LOCUS:PFF0730c# proteins: GENE ASSOCIATION: (PFF0730c)
fast: false
reactant: 779609
type: Reaction
product: 779633
name: enoyl-[acyl-carrier-protein]_reductase_(NADH)
reactant: 779585
reactant: 779597
kinetic law: 779645

309287
units: 756574
value: 0.0
type: LocalParameter

774402
stoichiometry: 1.0
species: 301956
type: SpeciesReference

786283
stoichiometry: 1.0
species: 300536
type: SpeciesReference

309382
units: 756574
value: 999999.0
type: LocalParameter

310060
value: 0.0
type: LocalParameter

310488
units: 756574
value: 999999.0
type: LocalParameter

306830
units: 756622
value: 0.0
type: LocalParameter

305469
value: 0.0
type: LocalParameter

306107
units: 756574
value: 999999.0
type: LocalParameter

307778
value: 0.0
type: LocalParameter

300967
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Histidine_C6H9N3O2
type: Species

302471
kinetic law: 771752
product: 771740
reactant: 771728
notes: Abbreviation: R_EX_dca_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_dca <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_dca_e_
type: Reaction

307223
value: 0.0
type: LocalParameter

303215
reversible: false
notes: Abbreviation: R_PSSA120 EC Number: 2.7.8.8 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M[c] dpdddecg[c] + M_ser_L[c] --> M[c] mp[c] + M_h[c] + M_ps120[c] genes: LOCUS:MAL13P1_335# proteins: GENE ASSOCIATION: (MAL13P1_335)
product: 787169
product: 787157
product: 787181
reactant: 787133
kinetic law: 787193
fast: false
type: Reaction
name: CDP-diacylglycerol-serine_O-phosphatidyltransferase
reactant: 787145

815493
stoichiometry: 1.0
species: 300628
type: SpeciesReference

307493
units: 756574
value: 0.0
type: LocalParameter

305573
units: 756574
value: 0.0
type: LocalParameter

307492
units: 756622
value: 0.0
type: LocalParameter

310273
units: 756574
value: 999999.0
type: LocalParameter

303527
product: 794709
notes: Abbreviation: R_PGPP160pp EC Number: 3.1.3.27 SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M_h2o[c] + M_pgp160[c] --> M_pg160[c] + M_pi[c] genes: proteins: GENE ASSOCIATION:
type: Reaction
product: 794697
name: phosphatidylglycerophosphatase
reactant: 794672
fast: false
reversible: false
reactant: 794684
kinetic law: 794721

309286
units: 756622
value: 0.0
type: LocalParameter

803298
stoichiometry: 1.0
species: 301390
type: SpeciesReference

759441
stoichiometry: 1.0
species: 300074
type: SpeciesReference

309381
units: 756574
value: -999999.0
type: LocalParameter

300262
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 6_hydroxymethyl_dihydropterin_pyrophosphate_C7H8N5O8P2
type: Species

778919
stoichiometry: 1.0
species: 300020
type: SpeciesReference

306831
units: 756574
value: -999999.0
type: LocalParameter

300837
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: glucocerebroside
type: Species

307777
units: 756574
value: 999999.0
type: LocalParameter

309595
units: 756574
value: 0.0
type: LocalParameter

306108
value: 0.0
type: LocalParameter

302852
reactant: 778546
product: 778582
reactant: 778558
fast: false
product: 778594
type: Reaction
product: 778570
reactant: 778534
kinetic law: 778606
name: beta-ketoacyl-acyl-carrier-protein_synthase_I
reversible: false
notes: Abbreviation: R_3OAS60_ap EC Number: 2.3.1.41 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_butACP[ap] + M_h[ap] + M[m] alACP[ap] --> M_3ohexACP[ap] + M_ACP[ap] + M[c] o2[ap] genes: LOCUS:PFB0505c# LOCUS:PFF1275c# proteins: GENE ASSOCIATION: (PFB0505c) or (PFF1275c)

306522
units: 756574
value: 999999.0
type: LocalParameter

307222
units: 756574
value: 999999.0
type: LocalParameter

303413
product: 792049
reversible: false
type: Reaction
kinetic law: 792061
product: 792024
notes: Abbreviation: R_PLIPA2A181pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa181[c] --> M_1odec11eg3p[c] + M_h[c] + M_ocdcea[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
product: 792037
reactant: 792000
reactant: 792012
fast: false
name: phospholipase_A2

766533
stoichiometry: 1.0
species: 300370
type: SpeciesReference

784367
stoichiometry: 1.0
species: 300911
type: SpeciesReference

309380
units: 756622
value: 0.0
type: LocalParameter

770337
stoichiometry: 1.0
species: 300094
type: SpeciesReference

802336
stoichiometry: 1.0
species: 300690
type: SpeciesReference

300831
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Glutamate_C5H8NO4
type: Species

310482
units: 756574
value: 999999.0
type: LocalParameter

309059
value: 0.0
type: LocalParameter

758340
stoichiometry: 1.0
species: 300829
type: SpeciesReference

310123
units: 756574
value: -999999.0
type: LocalParameter

810860
stoichiometry: 1.0
species: 300658
type: SpeciesReference

761456
stoichiometry: 1.0
species: 300358
type: SpeciesReference

792675
stoichiometry: 1.0
species: 299986
type: SpeciesReference

307342
units: 756574
value: 0.0
type: LocalParameter

309281
units: 756622
value: 0.0
type: LocalParameter

306523
value: 0.0
type: LocalParameter

779681
stoichiometry: 1.0
species: 301577
type: SpeciesReference

309594
units: 756622
value: 0.0
type: LocalParameter

306258
value: 0.0
type: LocalParameter

307007
units: 756622
value: 0.0
type: LocalParameter

301916
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Nitrate_NO3
type: Species

309593
value: 0.0
type: LocalParameter

303848
name: purine-nucleoside_phosphorylase
product: 801514
fast: false
notes: Abbreviation: R_PUNP3 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotides_PurineMetabolism ; AminoAcids_MetPolyamineMetabolism Equation: M_gsn[c] + M_pi[c] <==> M_gua[c] + M_r1p[c] genes: LOCUS:PFE0660c# proteins: GENE ASSOCIATION: (PFE0660c)
reactant: 801477
kinetic law: 801526
reactant: 801490
product: 801502
reversible: true
type: Reaction

306837
units: 756574
value: -999999.0
type: LocalParameter

310481
units: 756574
value: -999999.0
type: LocalParameter

782648
stoichiometry: 1.0
species: 301629
type: SpeciesReference

304906
units: 756574
value: 999999.0
type: LocalParameter

760609
stoichiometry: 1.0
species: 301084
type: SpeciesReference

309058
units: 756574
value: 999999.0
type: LocalParameter

305995
units: 756574
value: -999999.0
type: LocalParameter

300264
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 6_Phospho_D_gluconate_C6H10O10P
type: Species

310122
units: 756622
value: 0.0
type: LocalParameter

303002
kinetic law: 782612
product: 782600
product: 782588
reactant: 782576
notes: Abbreviation: R_3HAD121_ap EC Number: 4.2.1.61 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3hcddec5eACP[ap] --> M_h2o[ap] + M_t3c5ddeceACP[ap] genes: LOCUS:PF13_0128# proteins: GENE ASSOCIATION: (PF13_0128)
fast: false
reversible: false
name: 3-Hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase
type: Reaction

307341
units: 756622
value: 0.0
type: LocalParameter

797216
stoichiometry: 1.0
species: 300050
type: SpeciesReference

306524
units: 756622
value: 0.0
type: LocalParameter

308720
units: 756622
value: 0.0
type: LocalParameter

302135
type: Reaction
reactant: 762299
fast: false
reversible: false
name: R_G3PD_mt
reactant: 762287
notes: Abbreviation: R_G3PD_mt EC Number: 1.1.5.3 SUBSYSTEM: Carbohydrates_Glycolysis Equation: M_fad[m] + M_glyc3p[m] --> M_dhap[m] + M_fadh2[m] genes: LOCUS:PFC0275w# proteins: GENE ASSOCIATION: (PFC0275w)
product: 762324
kinetic law: 762336
product: 762312

809535
stoichiometry: 1.0
species: 300278
type: SpeciesReference

307006
value: 0.0
type: LocalParameter

306259
units: 756622
value: 0.0
type: LocalParameter

306947
units: 756574
value: -999999.0
type: LocalParameter

310484
value: 0.0
type: LocalParameter

808264
stoichiometry: 1.0
species: 300913
type: SpeciesReference

304905
units: 756574
value: 0.0
type: LocalParameter

795962
stoichiometry: 1.0
species: 301418
type: SpeciesReference

310125
units: 756574
value: 999999.0
type: LocalParameter

305998
value: 0.0
type: LocalParameter

791600
stoichiometry: 1.0
species: 300594
type: SpeciesReference

301771
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: 4_hydroxy_5_methyl_3_2H_furanone_C5H6O3
type: Species

306525
units: 756574
value: -999999.0
type: LocalParameter

307344
value: 0.0
type: LocalParameter

309283
units: 756574
value: 999999.0
type: LocalParameter

303005
kinetic law: 782660
product: 782648
product: 782636
reactant: 782624
notes: Abbreviation: R_3HAD140_ap EC Number: 4.2.1.61 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3hmrsACP[ap] --> M_h2o[ap] + M_tmrs2eACP[ap] genes: LOCUS:PF13_0128# proteins: GENE ASSOCIATION: (PF13_0128)
fast: false
reversible: false
name: 3-Hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase
type: Reaction

779078
stoichiometry: 1.0
species: 301278
type: SpeciesReference

301918
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: O2_O2
type: Species

304193
notes: Abbreviation: R_PYRt2r EC Number: SUBSYSTEM: Transport Equation: M_h[e] + M_pyr[e] <==> M_h[c] + M_pyr[c] genes: proteins: GENE ASSOCIATION:
type: Reaction
reactant: 808434
reactant: 808422
product: 808446
kinetic law: 808471
reversible: true
fast: false
name: R_PYRt2r
product: 808458

812488
stoichiometry: 1.0
species: 301134
type: SpeciesReference

306948
units: 756574
value: 999999.0
type: LocalParameter

308878
value: 0.0
type: LocalParameter

306835
units: 756622
value: 0.0
type: LocalParameter

803418
stoichiometry: 1.0
species: 300580
type: SpeciesReference

780215
stoichiometry: 1.0
species: 300368
type: SpeciesReference

309591
units: 756574
value: 999999.0
type: LocalParameter

304904
units: 756622
value: 0.0
type: LocalParameter

300266
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 6_phospho_D_glucono_1_5_lactone_C6H9O9P
type: Species

789922
stoichiometry: 1.0
species: 300777
type: SpeciesReference

809438
stoichiometry: 1.0
species: 300540
type: SpeciesReference

780912
stoichiometry: 1.0
species: 301204
type: SpeciesReference

305997
units: 756574
value: 999999.0
type: LocalParameter

774390
stoichiometry: 1.0
species: 301565
type: SpeciesReference

773736
stoichiometry: 1.0
species: 301194
type: SpeciesReference

309282
units: 756574
value: 0.0
type: LocalParameter

307343
units: 756574
value: 999999.0
type: LocalParameter

811812
stoichiometry: 1.0
species: 300242
type: SpeciesReference

780791
stoichiometry: 1.0
species: 300520
type: SpeciesReference

791286
stoichiometry: 1.0
species: 300903
type: SpeciesReference

303218
reactant: 787217
product: 787253
product: 787229
reversible: false
product: 787241
type: Reaction
name: CDP-diacylglycerol-serine_O-phosphatidyltransferase
notes: Abbreviation: R_PSSA140 EC Number: 2.7.8.8 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M[c] dpdtdecg[c] + M_ser_L[c] --> M[c] mp[c] + M_h[c] + M_ps140[c] genes: LOCUS:MAL13P1_335# proteins: GENE ASSOCIATION: (MAL13P1_335)
fast: false
kinetic law: 787265
reactant: 787205

306257
units: 756574
value: 999999.0
type: LocalParameter

796263
stoichiometry: 1.0
species: 300911
type: SpeciesReference

302137
reactant: 762372
product: 762408
product: 762384
product: 762396
name: glyceraldehyde-3-phosphate_dehydrogenase_(phosphorylating)
fast: false
reactant: 762348
reversible: true
type: Reaction
reactant: 762360
notes: Abbreviation: R_GAPD EC Number: 1.2.1.12 SUBSYSTEM: Carbohydrates_Glycolysis Equation: M_g3p[c] + M_nad[c] + M_pi[c] <==> M_13dpg[c] + M_h[c] + M_nadh[c] genes: LOCUS:PF14_0598# proteins: GENE ASSOCIATION: (PF14_0598)
kinetic law: 762420

307008
units: 756574
value: 0.0
type: LocalParameter

308879
units: 756622
value: 0.0
type: LocalParameter

783595
stoichiometry: 1.0
species: 301398
type: SpeciesReference

306949
value: 0.0
type: LocalParameter

300833
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: L_Glutamate_C5H8NO4
type: Species

300538
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Cysteine_C3H7NO2S
type: Species

308607
units: 756574
value: 999999.0
type: LocalParameter

761119
stoichiometry: 1.0
species: 300346
type: SpeciesReference

302468
kinetic law: 771716
product: 771704
reactant: 771692
notes: Abbreviation: R_EX_dag EC Number: SUBSYSTEM: Exchange Equation: [e] : M_dag <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_dag
type: Reaction

780361
stoichiometry: 1.0
species: 300520
type: SpeciesReference

306673
units: 756574
value: -999999.0
type: LocalParameter

792097
stoichiometry: 1.0
species: 299970
type: SpeciesReference

301334
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
type: Species

302143
type: Reaction
product: 762613
reactant: 762577
fast: false
notes: Abbreviation: R_LDH_L EC Number: 1.1.1.27 SUBSYSTEM: Carbohydrates_Glycolysis Equation: M_lac_L[c] + M_nad[c] <==> M_h[c] + M_nadh[c] + M_pyr[c] genes: LOCUS:PF13_0141# LOCUS:PF13_0144# proteins: GENE ASSOCIATION: (PF13_0141) or (PF13_0144)
reversible: true
name: L-lactate_dehydrogenase
kinetic law: 762637
reactant: 762589
product: 762625
product: 762601

307228
value: 0.0
type: LocalParameter

785594
stoichiometry: 1.0
species: 300911
type: SpeciesReference

798702
stoichiometry: 1.0
species: 301006
type: SpeciesReference

766753
stoichiometry: 1.0
species: 300829
type: SpeciesReference

306255
units: 756574
value: 0.0
type: LocalParameter

771111
stoichiometry: 1.0
species: 300294
type: SpeciesReference

309066
units: 756622
value: 0.0
type: LocalParameter

798582
stoichiometry: 1.0
species: 300370
type: SpeciesReference

309127
units: 756622
value: 0.0
type: LocalParameter

758763
stoichiometry: 1.0
species: 300370
type: SpeciesReference

310126
value: 0.0
type: LocalParameter

310053
units: 756574
value: 999999.0
type: LocalParameter

305171
value: 0.0
type: LocalParameter

762044
stoichiometry: 1.0
species: 301715
type: SpeciesReference

306672
units: 756622
value: 0.0
type: LocalParameter

301220
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: octadecenoate_n_C181_C18H33O2
type: Species

303842
notes: Abbreviation: R_PUNP1 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotides_PurineMetabolism ; AminoAcids_MetPolyamineMetabolism Equation: M_adn[c] + M_pi[c] <==> M_ade[c] + M_r1p[c] genes: LOCUS:PFE0660c# proteins: GENE ASSOCIATION: (PFE0660c)
kinetic law: 801404
reactant: 801368
fast: false
reactant: 801356
name: purine-nucleoside_phosphorylase
product: 801380
reversible: true
type: Reaction
product: 801392

777433
stoichiometry: 1.0
species: 301146
type: SpeciesReference

301924
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: octadecenoate_n_C181_C18H33O2
type: Species

768256
stoichiometry: 1.0
species: 301428
type: SpeciesReference

798896
stoichiometry: 1.0
species: 300606
type: SpeciesReference

310128
units: 756622
value: 0.0
type: LocalParameter

770181
stoichiometry: 3.0
species: 300915
type: SpeciesReference

307346
units: 756622
value: 0.0
type: LocalParameter

304733
kinetic law: 816558
product: 816545
reactant: 816533
notes: Abbreviation: R_PENDPtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_pendp[m] <==> M_pendp[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PENDPtmt
type: Reaction

306515
units: 756574
value: -999999.0
type: LocalParameter

307003
units: 756574
value: 0.0
type: LocalParameter

306254
units: 756622
value: 0.0
type: LocalParameter

760079
stoichiometry: 1.0
species: 300336
type: SpeciesReference

309128
units: 756574
value: 0.0
type: LocalParameter

300116
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 3_Dehydroquinate_C7H9O6
type: Species

794250
stoichiometry: 1.0
species: 300903
type: SpeciesReference

800739
stoichiometry: 1.0
species: 300606
type: SpeciesReference

785032
stoichiometry: 1.0
species: 300893
type: SpeciesReference

309067
units: 756574
value: 0.0
type: LocalParameter

788112
stoichiometry: 1.0
species: 300911
type: SpeciesReference

783800
stoichiometry: 0.1
species: 300654
type: SpeciesReference

778292
stoichiometry: 1.0
species: 301062
type: SpeciesReference

813120
stoichiometry: 1.0
species: 300686
type: SpeciesReference

309377
units: 756574
value: 999999.0
type: LocalParameter

307347
units: 756574
value: 0.0
type: LocalParameter

301336
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
type: Species

303845
product: 801452
kinetic law: 801465
name: purine-nucleoside_phosphorylase
type: Reaction
reactant: 801416
fast: false
reactant: 801428
reversible: true
product: 801440
notes: Abbreviation: R_PUNP2 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotides_PurineMetabolism ; AminoAcids_MetPolyamineMetabolism Equation: M_dad_2[c] + M_pi[c] <==> M_2dr1p[c] + M_ade[c] genes: LOCUS:PFE0660c# proteins: GENE ASSOCIATION: (PFE0660c)

303371
name: lysophospholipase
type: Reaction
kinetic law: 791044
notes: Abbreviation: R_LPLIPAL2G120 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2agpg120[c] + M_h2o[c] --> M_ddca[c] + M_g3pg[c] + M_h[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
reversible: false
fast: false
reactant: 790996
reactant: 790983
product: 791020
product: 791032
product: 791008

302579
kinetic law: 773140
product: 773128
reactant: 773116
notes: Abbreviation: R_EX_inost_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_inost <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_inost_e_
type: Reaction

306675
units: 756574
value: 999999.0
type: LocalParameter

300536
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: CTP_C9H12N3O14P3
type: Species

308605
units: 756574
value: 0.0
type: LocalParameter

300118
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 3_Dehydroshikimate_C7H7O5
type: Species

304736
kinetic law: 816594
product: 816582
reactant: 816570
notes: Abbreviation: R_MET_SLV EC Number: SUBSYSTEM: AminoAcids_MetPolyamineMetabolism Equation: M_5mtr1p[c] --> M[m] et_L[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: false
name: R_MET_SLV
type: Reaction

306518
value: 0.0
type: LocalParameter

310129
units: 756574
value: -999999.0
type: LocalParameter

306253
value: 0.0
type: LocalParameter

302145
fast: false
notes: Abbreviation: R_PFK EC Number: 2.7.1.11 SUBSYSTEM: Carbohydrates_Glycolysis Equation: M_atp[c] + M_f6p[c] --> M_adp[c] + M_fdp[c] + M_h[c] genes: LOCUS:PF11_0294# LOCUS:PFI0755c# proteins: GENE ASSOCIATION: (PF11_0294) or (PFI0755c)
product: 762697
reactant: 762649
reactant: 762661
product: 762685
name: 6-phosphofructokinase
reversible: false
product: 762673
kinetic law: 762709
type: Reaction

310055
value: 0.0
type: LocalParameter

777797
stoichiometry: 1.0
species: 301202
type: SpeciesReference

306519
units: 756622
value: 0.0
type: LocalParameter

309129
units: 756574
value: 999999.0
type: LocalParameter

763372
stoichiometry: 1.0
species: 300414
type: SpeciesReference

307348
units: 756574
value: 999999.0
type: LocalParameter

308604
units: 756622
value: 0.0
type: LocalParameter

305174
units: 756622
value: 0.0
type: LocalParameter

767342
stoichiometry: 1.0
species: 301166
type: SpeciesReference

309378
value: 0.0
type: LocalParameter

807926
stoichiometry: 1.0
species: 300911
type: SpeciesReference

301926
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: octanoate_n_C80_C8H15O2
type: Species

301222
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: octadecenoate_n_C181_C18H33O2
type: Species

767053
stoichiometry: 1.0
species: 300819
type: SpeciesReference

306517
units: 756574
value: 999999.0
type: LocalParameter

307005
units: 756574
value: 999999.0
type: LocalParameter

306252
units: 756574
value: 999999.0
type: LocalParameter

310056
units: 756622
value: 0.0
type: LocalParameter

777857
stoichiometry: 1.0
species: 300564
type: SpeciesReference

309069
units: 756574
value: 999999.0
type: LocalParameter

817767
stoichiometry: 54.462
species: 300903
type: SpeciesReference

787385
stoichiometry: 1.0
species: 300911
type: SpeciesReference

810088
stoichiometry: 1.0
species: 301086
type: SpeciesReference

788328
stoichiometry: 1.0
species: 300911
type: SpeciesReference

758128
stoichiometry: 1.0
species: 301142
type: SpeciesReference

773443
stoichiometry: 1.0
species: 301086
type: SpeciesReference

767801
stoichiometry: 2.0
species: 300915
type: SpeciesReference

309062
units: 756574
value: 0.0
type: LocalParameter

301779
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Adenine_C5H5N5
type: Species

300827
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: L_Glutamate_C5H8NO4
type: Species

770482
stoichiometry: 1.0
species: 301483
type: SpeciesReference

308603
value: 0.0
type: LocalParameter

305175
units: 756574
value: 0.0
type: LocalParameter

307349
value: 0.0
type: LocalParameter

795637
stoichiometry: 1.0
species: 300532
type: SpeciesReference

309375
units: 756574
value: -999999.0
type: LocalParameter

301920
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Superoxide_anion_O2
type: Species

310489
value: 0.0
type: LocalParameter

306841
units: 756622
value: 0.0
type: LocalParameter

812828
stoichiometry: 1.0
species: 300112
type: SpeciesReference

304739
kinetic law: 816631
product: 816618
reactant: 816606
notes: Abbreviation: R_EX_4ahmmp EC Number: SUBSYSTEM: Exchange Equation: [e] : M_4ahmmp <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_4ahmmp
type: Reaction

786867
stoichiometry: 1.0
species: 301314
type: SpeciesReference

309276
units: 756574
value: -999999.0
type: LocalParameter

757398
stoichiometry: 1.0
species: 300414
type: SpeciesReference

785182
stoichiometry: 1.0
species: 301414
type: SpeciesReference

307225
units: 756622
value: 0.0
type: LocalParameter

304199
fast: false
product: 808543
notes: Abbreviation: R_SO4HCOtex EC Number: SUBSYSTEM: Transport Equation: (2.0) M_hco3[c] + M_so4[e] --> (2.0) M_hco3[e] + M_so4[c] genes: proteins: GENE ASSOCIATION:
kinetic law: 808567
name: R_SO4HCOtex
type: Reaction
reversible: false
reactant: 808519
product: 808555
reactant: 808531

807502
stoichiometry: 1.0
species: 300879
type: SpeciesReference

810945
stoichiometry: 1.0
species: 301130
type: SpeciesReference

306250
units: 756574
value: 0.0
type: LocalParameter

309063
units: 756574
value: 999999.0
type: LocalParameter

305176
units: 756574
value: 999999.0
type: LocalParameter

303221
type: Reaction
kinetic law: 787337
reversible: false
product: 787325
notes: Abbreviation: R_PSSA141 EC Number: 2.7.8.8 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M[c] dpdtdec7eg[c] + M_ser_L[c] --> M[c] mp[c] + M_h[c] + M_ps141[c] genes: LOCUS:MAL13P1_335# proteins: GENE ASSOCIATION: (MAL13P1_335)
name: CDP-diacylglycerol-serine_O-phosphatidyltransferase
fast: false
reactant: 787277
product: 787313
reactant: 787289
product: 787301

302855
type: Reaction
reactant: 778642
kinetic law: 778690
reactant: 778618
notes: Abbreviation: R_3OAS80_ap EC Number: 2.3.1.41 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M_hexACP[ap] + M[m] alACP[ap] --> M_3ooctACP[ap] + M_ACP[ap] + M[c] o2[ap] genes: LOCUS:PFB0505c# LOCUS:PFF1275c# proteins: GENE ASSOCIATION: (PFB0505c) or (PFF1275c)
product: 778678
reactant: 778630
fast: false
reversible: false
name: beta-ketoacyl-acyl-carrier-protein_synthase_I
product: 778654
product: 778666

302465
kinetic law: 771680
product: 771668
reactant: 771656
notes: Abbreviation: R_EX_dad_2_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_dad_2 <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_dad_2_e_
type: Reaction

790669
stoichiometry: 1.0
species: 301703
type: SpeciesReference

301338
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: all_trans_Pentaprenyl_diphosphate_C25H41O7P2
type: Species

810642
stoichiometry: 1.0
species: 300911
type: SpeciesReference

797929
stoichiometry: 1.0
species: 301390
type: SpeciesReference

300534
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: CTP_C9H12N3O14P3
type: Species

306840
value: 0.0
type: LocalParameter

801078
stoichiometry: 1.0
species: 301006
type: SpeciesReference

301777
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Acetaldehyde_C2H4O
type: Species

760441
stoichiometry: 1.0
species: 301473
type: SpeciesReference

787640
stoichiometry: 0.01
species: 300440
type: SpeciesReference

300112
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: 3_5_Cyclic_GMP_C10H11N5O7P
type: Species

802441
stoichiometry: 1.0
species: 300554
type: SpeciesReference

759501
stoichiometry: 1.0
species: 301743
type: SpeciesReference

300829
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Glutamate_C5H8NO4
type: Species

765905
stoichiometry: 1.0
species: 300911
type: SpeciesReference

302462
kinetic law: 771644
product: 771632
reactant: 771620
notes: Abbreviation: R_EX_cytd_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M[c] ytd <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_cytd_e_
type: Reaction

800884
stoichiometry: 1.0
species: 300869
type: SpeciesReference

792374
stoichiometry: 1.0
species: 301322
type: SpeciesReference

306671
value: 0.0
type: LocalParameter

307226
units: 756574
value: 0.0
type: LocalParameter

302141
kinetic law: 762565
reactant: 762517
reactant: 762505
type: Reaction
reversible: false
notes: Abbreviation: R_HEX1 EC Number: 2.7.1.1 SUBSYSTEM: Carbohydrates_Glycolysis ; Carbohydrates_MannoseFructoseMetabolism Equation: M_atp[c] + M_glc_D[c] --> M_adp[c] + M_g6p[c] + M_h[c] genes: LOCUS:PFF1155w# proteins: GENE ASSOCIATION: (PFF1155w)
product: 762529
fast: false
product: 762553
product: 762541
name: hexokinase

784523
stoichiometry: 0.01
species: 301469
type: SpeciesReference

308601
units: 756574
value: 999999.0
type: LocalParameter

790560
stoichiometry: 1.0
species: 300903
type: SpeciesReference

300270
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: acyl_carrier_protein_C11H21N2O7PRS
type: Species

768679
stoichiometry: 1.0
species: 300480
type: SpeciesReference

817344
stoichiometry: 1.0
species: 301432
type: SpeciesReference

309373
value: 0.0
type: LocalParameter

310051
units: 756622
value: 0.0
type: LocalParameter

808483
stoichiometry: 1.0
species: 301525
type: SpeciesReference

309278
units: 756574
value: 999999.0
type: LocalParameter

799004
stoichiometry: 1.0
species: 300885
type: SpeciesReference

767619
stoichiometry: 1.0
species: 300528
type: SpeciesReference

769830
stoichiometry: 1.0
species: 301505
type: SpeciesReference

812271
stoichiometry: 1.0
species: 300721
type: SpeciesReference

768340
stoichiometry: 3.0
species: 301567
type: SpeciesReference

791928
stoichiometry: 1.0
species: 300903
type: SpeciesReference

788896
stoichiometry: 1.0
species: 300851
type: SpeciesReference

802888
stoichiometry: 2.0
species: 301390
type: SpeciesReference

309065
value: 0.0
type: LocalParameter

307001
units: 756622
value: 0.0
type: LocalParameter

308600
units: 756574
value: 0.0
type: LocalParameter

793477
stoichiometry: 1.0
species: 300911
type: SpeciesReference

309374
units: 756622
value: 0.0
type: LocalParameter

307227
units: 756574
value: 999999.0
type: LocalParameter

796650
stoichiometry: 1.0
species: 300775
type: SpeciesReference

301922
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: octadecanoate_n_C180_C18H35O2
type: Species

306670
units: 756574
value: 999999.0
type: LocalParameter

766873
stoichiometry: 1.0
species: 301495
type: SpeciesReference

300532
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: ceramide
type: Species

809752
stoichiometry: 1.0
species: 300911
type: SpeciesReference

302858
product: 778738
reversible: false
reactant: 778726
product: 778763
fast: false
reactant: 778714
product: 778750
reactant: 778702
type: Reaction
kinetic law: 778787
product: 778775
name: Acetyl-CoA_carboxylase
notes: Abbreviation: R_ACCOAC_ap EC Number: 6.4.1.2 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_accoa[ap] + M_atp[ap] + M_hco3[ap] --> M_adp[ap] + M_h[ap] + M[m] alcoa[ap] + M_pi[ap] genes: LOCUS:PF14_0664# proteins: GENE ASSOCIATION: (PF14_0664)

310052
units: 756574
value: -999999.0
type: LocalParameter

758277
stoichiometry: 1.0
species: 301158
type: SpeciesReference

794684
stoichiometry: 1.0
species: 301366
type: SpeciesReference

309279
value: 0.0
type: LocalParameter

763145
stoichiometry: 1.0
species: 300851
type: SpeciesReference

300114
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 3_5_Cyclic_IMP_C10H10N4O7P
type: Species

794576
stoichiometry: 1.0
species: 301350
type: SpeciesReference

302746
kinetic law: 775648
product: 775576
product: 775564
reactant: 775552
product: 775600
reversible: true
fast: false
notes: Abbreviation: R_lipid4 EC Number: SUBSYSTEM: Lipids Equation: M[c] dpdag[c] <==> M[c] dpdddecg[c] + M[c] dpdtdecg[c] + M[c] dpdtdec7eg[c] + M[c] dpdhdecg[c] + M[c] dpdhdec9eg[c] + M[c] dpdodecg[c] + M[c] dpdodec11eg[c] genes: proteins: GENE ASSOCIATION:
product: 775636
product: 775588
name: R_lipid4
product: 775624
product: 775612
type: Reaction

811234
stoichiometry: 1.0
species: 301284
type: SpeciesReference

759657
stoichiometry: 1.0
species: 300200
type: SpeciesReference

305890
units: 756574
value: 0.0
type: LocalParameter

773599
stoichiometry: 1.0
species: 301912
type: SpeciesReference

795057
stoichiometry: 1.0
species: 301358
type: SpeciesReference

756829
stoichiometry: 1.0
species: 301416
type: SpeciesReference

310332
units: 756574
value: 0.0
type: LocalParameter

802660
stoichiometry: 1.0
species: 300580
type: SpeciesReference

795528
stoichiometry: 1.0
species: 301398
type: SpeciesReference

302573
kinetic law: 773068
product: 773056
reactant: 773044
notes: Abbreviation: R_EX_ile_L_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_ile_L <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_ile_L_e_
type: Reaction

309484
units: 756622
value: 0.0
type: LocalParameter

303377
type: Reaction
product: 791165
product: 791177
fast: false
notes: Abbreviation: R_LPLIPAL2G141 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2agpg141[c] + M_h2o[c] --> M_g3pg[c] + M_h[c] + M_ttdcea[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
reactant: 791128
reactant: 791140
name: lysophospholipase
product: 791152
kinetic law: 791189
reversible: false

305026
units: 756574
value: 999999.0
type: LocalParameter

307115
units: 756622
value: 0.0
type: LocalParameter

786975
stoichiometry: 1.0
species: 300514
type: SpeciesReference

790211
stoichiometry: 1.0
species: 300851
type: SpeciesReference

792796
stoichiometry: 1.0
species: 300903
type: SpeciesReference

801187
stoichiometry: 1.0
species: 300510
type: SpeciesReference

787797
stoichiometry: 1.0
species: 300903
type: SpeciesReference

790778
stoichiometry: 1.0
species: 300903
type: SpeciesReference

804238
stoichiometry: 1.0
species: 300829
type: SpeciesReference

302031
reactant: 758460
reactant: 758473
product: 758533
reactant: 758485
type: Reaction
product: 758497
reversible: false
name: R_GLYCL_mt
fast: false
product: 758521
notes: Abbreviation: R_GLYCL_mt EC Number: 1.4.4.2+2.1.2.10+1.8.1.4 SUBSYSTEM: AminoAcids_GlySerMetabolism Equation: M_gly[m] + M_nad[m] + M_thf[m] --> M[c] o2[m] + M[m] lthf[m] + M_nadh[m] + M_nh4[m] genes: LOCUS:PF13_0345# LOCUS:PF08_0066# LOCUS:PFL1550w# proteins: GENE ASSOCIATION: (PF13_0345) and ((PF08_0066) or (PFL1550w))
product: 758509
kinetic law: 758546

309485
units: 756574
value: -999999.0
type: LocalParameter

307116
units: 756574
value: 0.0
type: LocalParameter

807659
stoichiometry: 1.0
species: 300911
type: SpeciesReference

813653
stoichiometry: 1.0
species: 301489
type: SpeciesReference

309120
value: 0.0
type: LocalParameter

760333
stoichiometry: 1.0
species: 301090
type: SpeciesReference

816980
stoichiometry: 6.0
species: 300392
type: SpeciesReference

309121
units: 756622
value: 0.0
type: LocalParameter

300688
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Deoxyuridine_C9H12N2O5
type: Species

310334
units: 756574
value: 999999.0
type: LocalParameter

808374
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809860
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species: 300911
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804398
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species: 300923
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787942
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species: 300903
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799955
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species: 300903
type: SpeciesReference

303950
reactant: 803841
notes: Abbreviation: R_OMPDC EC Number: 4.1.1.23 SUBSYSTEM: Nucleotides_PyrimidineMetabolism Equation: M_h[c] + M_orot5p[c] --> M[c] o2[c] + M_ump[c] genes: LOCUS:PF10_0225# proteins: GENE ASSOCIATION: (PF10_0225)
reversible: false
kinetic law: 803890
name: Orotidine-5'-phosphate_decarboxylase
type: Reaction
product: 803866
product: 803878
reactant: 803853
fast: false

307117
units: 756574
value: 999999.0
type: LocalParameter

790451
stoichiometry: 1.0
species: 301220
type: SpeciesReference

784632
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species: 300412
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800535
stoichiometry: 1.0
species: 301390
type: SpeciesReference

308718
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type: LocalParameter

766981
stoichiometry: 1.0
species: 300332
type: SpeciesReference

790850
stoichiometry: 1.0
species: 300903
type: SpeciesReference

769200
stoichiometry: 1.0
species: 300414
type: SpeciesReference

309122
units: 756574
value: -999999.0
type: LocalParameter

300110
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 3_5_Cyclic_GMP_C10H11N5O7P
type: Species

781129
stoichiometry: 1.0
species: 300520
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758873
stoichiometry: 1.0
species: 300903
type: SpeciesReference

310335
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305893
units: 756574
value: 999999.0
type: LocalParameter

302749
product: 775672
product: 775720
reversible: true
product: 775684
product: 775732
notes: Abbreviation: R_lipid5 EC Number: SUBSYSTEM: Lipids Equation: M_pe[c] <==> M_pe120[c] + M_pe140[c] + M_pe141[c] + M_pe160[c] + M_pe161[c] + M_pe180[c] + M_pe181[c] genes: proteins: GENE ASSOCIATION:
kinetic law: 775756
type: Reaction
product: 775708
fast: false
name: R_lipid5
product: 775696
reactant: 775660
product: 775744

792229
stoichiometry: 1.0
species: 301314
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309483
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307118
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type: LocalParameter

767209
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species: 301166
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302033
reactant: 758570
product: 758606
reactant: 758582
type: Reaction
reactant: 758558
kinetic law: 758630
notes: Abbreviation: R_GLYTRS EC Number: 6.1.1.14 SUBSYSTEM: AminoAcids_GlySerMetabolism Equation: M_atp[c] + M_gly[c] + M_trnagly[c] --> M_amp[c] + M_glytrna[c] + M_ppi[c] genes: LOCUS:PF14_0198# proteins: GENE ASSOCIATION: (PF14_0198)
reversible: false
fast: false
name: glycine-tRNA_ligase
product: 758618
product: 758594

816253
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species: 301380
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793320
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species: 300903
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764955
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species: 301118
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308717
units: 756574
value: 999999.0
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781491
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species: 300520
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805039
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species: 301505
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770772
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species: 301483
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305029
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309061
units: 756622
value: 0.0
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810702
stoichiometry: 1.0
species: 300911
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307619
units: 756574
value: 0.0
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788535
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species: 300851
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805610
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species: 301406
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310057
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774970
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species: 300723
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760187
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species: 301416
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757639
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species: 300346
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771220
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species: 300328
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785485
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species: 299938
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814719
stoichiometry: 1.0
species: 300416
type: SpeciesReference

304730
kinetic law: 816521
product: 816509
reactant: 816497
notes: Abbreviation: R_TYRLtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_tyr_L[m] <==> M_tyr_L[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_TYRLtmt
type: Reaction

766644
stoichiometry: 1.0
species: 301142
type: SpeciesReference

306677
units: 756622
value: 0.0
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775528
stoichiometry: 1.0
species: 299962
type: SpeciesReference

309488
value: 0.0
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310337
units: 756622
value: 0.0
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771873
stoichiometry: 1.0
species: 300636
type: SpeciesReference

811090
stoichiometry: 1.0
species: 301268
type: SpeciesReference

301330
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: phosphatidylethanolamine_dioctadec_11_enoyl_n_C181_C41H78N1O8P1
type: Species

307618
units: 756622
value: 0.0
type: LocalParameter

769938
stoichiometry: 1.0
species: 300092
type: SpeciesReference

792518
stoichiometry: 1.0
species: 301330
type: SpeciesReference

788003
stoichiometry: 1.0
species: 300781
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782419
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species: 300270
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786562
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species: 300414
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794141
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species: 300911
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804070
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species: 300911
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764520
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species: 300817
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309124
units: 756574
value: 999999.0
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302035
reversible: false
reactant: 758667
reactant: 758642
fast: false
type: Reaction
product: 758679
product: 758703
notes: Abbreviation: R_SERTRS2 EC Number: 6.1.1.11 SUBSYSTEM: AminoAcids_SelenocysteineMetabolism ; AminoAcids_GlySerMetabolism Equation: M_atp[c] + M_ser_L[c] + M_trnasecys[c] --> M_amp[c] + M_ppi[c] + M_sertrna_sec_[c] genes: LOCUS:PF07_0073# LOCUS:PFL0770w# proteins: GENE ASSOCIATION: (PF07_0073) or (PFL0770w)
reactant: 758654
product: 758691
name: Serine-tRNA_ligase
kinetic law: 758715

756998
stoichiometry: 1.0
species: 301148
type: SpeciesReference

796383
stoichiometry: 1.0
species: 301186
type: SpeciesReference

306676
value: 0.0
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310338
units: 756574
value: -999999.0
type: LocalParameter

303374
kinetic law: 791116
product: 791092
name: lysophospholipase
type: Reaction
reversible: false
notes: Abbreviation: R_LPLIPAL2G140 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2agpg140[c] + M_h2o[c] --> M_g3pg[c] + M_h[c] + M_ttdca[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
fast: false
reactant: 791056
product: 791104
reactant: 791068
product: 791080

301224
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
type: Species

301228
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: octanoate_n_C80_C8H15O2
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810437
stoichiometry: 1.0
species: 300913
type: SpeciesReference

797060
stoichiometry: 1.0
species: 300376
type: SpeciesReference

761564
stoichiometry: 1.0
species: 301416
type: SpeciesReference

787277
stoichiometry: 1.0
species: 300464
type: SpeciesReference

305896
value: 0.0
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309125
value: 0.0
type: LocalParameter

310059
units: 756574
value: 999999.0
type: LocalParameter

305024
units: 756622
value: 0.0
type: LocalParameter

307616
value: 0.0
type: LocalParameter

776903
stoichiometry: 1.0
species: 300170
type: SpeciesReference

307791
units: 756622
value: 0.0
type: LocalParameter

310339
units: 756574
value: 999999.0
type: LocalParameter

789172
stoichiometry: 1.0
species: 299976
type: SpeciesReference

301332
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: phosphatidylethanolamine_dioctadec_11_enoyl_n_C181_C41H78N1O8P1
type: Species

757204
stoichiometry: 1.0
species: 300903
type: SpeciesReference

804931
stoichiometry: 1.0
species: 300717
type: SpeciesReference

306678
units: 756574
value: -999999.0
type: LocalParameter

767499
stoichiometry: 1.0
species: 301136
type: SpeciesReference

302037
notes: Abbreviation: R_SERTRS EC Number: 6.1.1.11 SUBSYSTEM: AminoAcids_SelenocysteineMetabolism ; AminoAcids_GlySerMetabolism Equation: M_atp[c] + M_ser_L[c] + M_trnaser[c] --> M_amp[c] + M_ppi[c] + M_sertrna[c] genes: LOCUS:PF07_0073# LOCUS:PFL0770w# proteins: GENE ASSOCIATION: (PF07_0073) or (PFL0770w)
type: Reaction
fast: false
reversible: false
kinetic law: 758800
product: 758788
reactant: 758739
product: 758775
product: 758763
reactant: 758751
name: Serine-tRNA_ligase
reactant: 758727

301226
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: octanoate_n_C80_C8H15O2
type: Species

771560
stoichiometry: 1.0
species: 301799
type: SpeciesReference

756974
stoichiometry: 1.0
species: 300018
type: SpeciesReference

305025
units: 756574
value: 0.0
type: LocalParameter

302576
kinetic law: 773104
product: 773092
reactant: 773080
notes: Abbreviation: R_EX_inositol EC Number: SUBSYSTEM: Exchange Equation: [e] : M_ptd1ino <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_inositol
type: Reaction

814816
stoichiometry: 1.0
species: 300334
type: SpeciesReference

309487
units: 756574
value: 999999.0
type: LocalParameter

303953
product: 803926
product: 803938
reactant: 803914
type: Reaction
name: orotate_phosphoribosyltransferase
fast: false
reversible: true
kinetic law: 803950
notes: Abbreviation: R_ORPT EC Number: 2.4.2.10 SUBSYSTEM: Nucleotides_PyrimidineMetabolism Equation: M_orot5p[c] + M_ppi[c] <==> M_orot[c] + M_prpp[c] genes: LOCUS:PFE0630c# proteins: GENE ASSOCIATION: (PFE0630c)
reactant: 803902

783111
stoichiometry: 1.0
species: 300512
type: SpeciesReference

307792
units: 756574
value: 0.0
type: LocalParameter

308886
units: 756574
value: 0.0
type: LocalParameter

301635
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

791140
stoichiometry: 1.0
species: 300903
type: SpeciesReference

307613
units: 756574
value: 0.0
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308733
units: 756574
value: 999999.0
type: LocalParameter

307784
value: 0.0
type: LocalParameter

306826
units: 756574
value: -999999.0
type: LocalParameter

809631
stoichiometry: 1.0
species: 301535
type: SpeciesReference

310565
units: 756574
value: 999999.0
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306931
units: 756622
value: 0.0
type: LocalParameter

773152
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species: 301014
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788764
stoichiometry: 1.0
species: 300911
type: SpeciesReference

299996
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1_Acyl_sn_glycero_3_phosphoglycerol_n_C181_C24H46O9P1
type: Species

816108
stoichiometry: 1.0
species: 301186
type: SpeciesReference

759886
stoichiometry: 1.0
species: 300911
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789800
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species: 300939
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772613
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species: 301858
type: SpeciesReference

310492
units: 756574
value: -999999.0
type: LocalParameter

811715
stoichiometry: 1.0
species: 300574
type: SpeciesReference

797315
stoichiometry: 1.0
species: 300777
type: SpeciesReference

303149
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name: diacylglycerol_kinase
notes: Abbreviation: R_DAGK141 EC Number: 2.7.1.107 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_12dgr141[c] + M_atp[c] --> M_adp[c] + M_h[c] + M_pa141[c] genes: LOCUS:PF14_0681# LOCUS:PFI1485c# proteins: GENE ASSOCIATION: (PF14_0681) or (PFI1485c)
reactant: 785642
product: 785654
reactant: 785630
product: 785666
kinetic law: 785690
product: 785678
fast: false
type: Reaction

299994
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1_Acyl_sn_glycero_3_phosphoglycerol_n_C180_C24H48O9P1
type: Species

306112
units: 756574
value: 999999.0
type: LocalParameter

309290
value: 0.0
type: LocalParameter

307612
units: 756622
value: 0.0
type: LocalParameter

800329
stoichiometry: 1.0
species: 300903
type: SpeciesReference

308887
units: 756574
value: 999999.0
type: LocalParameter

306828
units: 756574
value: 999999.0
type: LocalParameter

808144
stoichiometry: 1.0
species: 301228
type: SpeciesReference

300692
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: 1_deoxy_D_xylulose_5_phosphate_C5H9O7P
type: Species

305569
value: 0.0
type: LocalParameter

813010
stoichiometry: 1.0
species: 300608
type: SpeciesReference

306932
units: 756574
value: -999999.0
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793611
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species: 300472
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769951
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species: 300338
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781334
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species: 301146
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310491
units: 756622
value: 0.0
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773857
stoichiometry: 1.0
species: 301926
type: SpeciesReference

310269
value: 0.0
type: LocalParameter

302039
reversible: false
reactant: 758824
type: Reaction
reactant: 758812
kinetic law: 758861
fast: false
notes: Abbreviation: R_PSP_Lp EC Number: SUBSYSTEM: AminoAcids_GlySerMetabolism Equation: M_h2o[c] + M_pser_L[c] --> M_pi[c] + M_ser_L[c] genes: LOCUS:PFI0880c# proteins: GENE ASSOCIATION: (PFI0880c)
product: 758849
product: 758837
name: R_PSP_Lp

306113
value: 0.0
type: LocalParameter

306829
value: 0.0
type: LocalParameter

307615
units: 756574
value: 999999.0
type: LocalParameter

308735
value: 0.0
type: LocalParameter

775913
stoichiometry: 1.0
species: 300286
type: SpeciesReference

307782
units: 756574
value: 999999.0
type: LocalParameter

790548
stoichiometry: 1.0
species: 300032
type: SpeciesReference

303968
product: 804338
reactant: 804287
fast: false
name: glycine_hydroxymethyltransferase
reversible: true
notes: Abbreviation: R_GHMT2r EC Number: 2.1.2.1 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; AminoAcids_GlySerMetabolism ; Cofactors_FolateBiosynthesis Equation: M_ser_L[c] + M_thf[c] <==> M_gly[c] + M_h2o[c] + M[m] lthf[c] genes: LOCUS:PF14_0534# LOCUS:PFL1720w# proteins: GENE ASSOCIATION: (PF14_0534) or (PFL1720w)
product: 804325
type: Reaction
product: 804313
reactant: 804300
kinetic law: 804350

306933
units: 756574
value: 999999.0
type: LocalParameter

310563
units: 756574
value: -999999.0
type: LocalParameter

310268
units: 756574
value: 999999.0
type: LocalParameter

305899
units: 756622
value: 0.0
type: LocalParameter

303407
reactant: 791856
kinetic law: 791916
fast: false
notes: Abbreviation: R_PLIPA2A161pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa161[c] --> M_1hdec9eg3p[c] + M_h[c] + M_hdcea[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
reversible: false
name: phospholipase_A2
product: 791904
product: 791892
reactant: 791868
product: 791880
type: Reaction

306114
units: 756622
value: 0.0
type: LocalParameter

304520
kinetic law: 813495
product: 813483
reactant: 813471
notes: Abbreviation: R_NACUP EC Number: SUBSYSTEM: Transport_cofactor Equation: M_nac[e] --> M_nac[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: false
name: R_NACUP
type: Reaction

299992
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1_Acyl_sn_glycero_3_phosphoglycerol_n_C161_C22H42O9P1
type: Species

769418
stoichiometry: 1.0
species: 300911
type: SpeciesReference

781262
stoichiometry: 1.0
species: 300901
type: SpeciesReference

308736
units: 756622
value: 0.0
type: LocalParameter

779561
stoichiometry: 1.0
species: 301593
type: SpeciesReference

308889
value: 0.0
type: LocalParameter

307781
units: 756574
value: 0.0
type: LocalParameter

310562
units: 756622
value: 0.0
type: LocalParameter

309690
units: 756574
value: 999999.0
type: LocalParameter

772935
stoichiometry: 1.0
species: 300929
type: SpeciesReference

306934
value: 0.0
type: LocalParameter

300694
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1_deoxy_D_xylulose_5_phosphate_C5H9O7P
type: Species

301633
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

804641
stoichiometry: 1.0
species: 301458
type: SpeciesReference

303209
reactant: 787024
fast: false
reversible: false
type: Reaction
name: Phosphatidylserine_decarboxylase
product: 787048
kinetic law: 787060
product: 787036
notes: Abbreviation: R_PSD180 EC Number: 4.1.1.65 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_h[c] + M_ps180[c] --> M[c] o2[c] + M_pe180[c] genes: LOCUS:PFI1370c# proteins: GENE ASSOCIATION: (PFI1370c)
reactant: 787012

782503
stoichiometry: 1.0
species: 301595
type: SpeciesReference

309693
units: 756622
value: 0.0
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306115
units: 756574
value: 0.0
type: LocalParameter

308737
units: 756574
value: 0.0
type: LocalParameter

763649
stoichiometry: 1.0
species: 300911
type: SpeciesReference

307788
units: 756574
value: 999999.0
type: LocalParameter

309142
value: 0.0
type: LocalParameter

308882
units: 756574
value: 999999.0
type: LocalParameter

301639
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: Oxidized_thioredoxin_X
type: Species

307762
value: 0.0
type: LocalParameter

784247
stoichiometry: 1.0
species: 301106
type: SpeciesReference

303404
fast: false
kinetic law: 791844
notes: Abbreviation: R_PLIPA2A160pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa160[c] --> M_1hdecg3p[c] + M_h[c] + M_hdca[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
product: 791820
product: 791832
name: phospholipase_A2
product: 791808
reactant: 791795
reversible: false
type: Reaction
reactant: 791783

303146
kinetic law: 785618
name: diacylglycerol_kinase
notes: Abbreviation: R_DAGK140 EC Number: 2.7.1.107 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_12dgr140[c] + M_atp[c] --> M_adp[c] + M_h[c] + M_pa140[c] genes: LOCUS:PF14_0681# LOCUS:PFI1485c# proteins: GENE ASSOCIATION: (PF14_0681) or (PFI1485c)
reactant: 785558
reactant: 785570
fast: false
type: Reaction
reversible: false
product: 785582
product: 785594
product: 785606

305453
units: 756574
value: 0.0
type: LocalParameter

810208
stoichiometry: 1.0
species: 301376
type: SpeciesReference

798159
stoichiometry: 1.0
species: 299958
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803154
stoichiometry: 1.0
species: 300903
type: SpeciesReference

793755
stoichiometry: 1.0
species: 300851
type: SpeciesReference

310266
units: 756574
value: -999999.0
type: LocalParameter

799665
stoichiometry: 1.0
species: 301006
type: SpeciesReference

305566
units: 756574
value: 999999.0
type: LocalParameter

310343
units: 756574
value: -999999.0
type: LocalParameter

300697
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: 1_deoxy_D_xylulose_5_phosphate_C5H9O7P
type: Species

775768
stoichiometry: 1.0
species: 300282
type: SpeciesReference

309587
value: 0.0
type: LocalParameter

310569
units: 756574
value: -999999.0
type: LocalParameter

302731
reactant: 774982
notes: Abbreviation: R_FEROpp EC Number: 1.16.3.1 SUBSYSTEM: Ion Equation: (4.0) M_fe2[c] + (4.0) M_h[c] + M_o2[c] --> (4.0) M_fe3[c] + (2.0) M_h2o[c] genes: proteins: GENE ASSOCIATION:
name: ferroxidase
type: Reaction
product: 775006
kinetic law: 775031
reversible: false
fast: false
reactant: 774970
reactant: 774994
product: 775019

306530
units: 756574
value: -999999.0
type: LocalParameter

308883
value: 0.0
type: LocalParameter

766436
stoichiometry: 1.0
species: 300903
type: SpeciesReference

307101
value: 0.0
type: LocalParameter

304526
fast: false
product: 813580
reversible: true
reactant: 813543
reactant: 813556
product: 813568
kinetic law: 813592
type: Reaction
name: R_PNTOt2
notes: Abbreviation: R_PNTOt2 EC Number: SUBSYSTEM: Transport_cofactor Equation: M_h[e] + M_pnto_R[e] <==> M_h[c] + M_pnto_R[c] genes: LOCUS:PF11_0059# proteins: GENE ASSOCIATION: (PF11_0059)

302591
kinetic law: 773286
product: 773274
reactant: 773261
notes: Abbreviation: R_EX_leu_L_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_leu_L <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_leu_L_e_
type: Reaction

307761
units: 756574
value: 999999.0
type: LocalParameter

303359
product: 790717
name: lysophospholipase
type: Reaction
fast: false
reactant: 790693
kinetic law: 790754
notes: Abbreviation: R_LPLIPAL2E160 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2agpe160[c] + M_h2o[c] --> M_g3pe[c] + M_h[c] + M_hdca[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
reactant: 790705
reversible: false
product: 790741
product: 790729

305452
units: 756622
value: 0.0
type: LocalParameter

310265
units: 756622
value: 0.0
type: LocalParameter

769092
stoichiometry: 1.0
species: 301543
type: SpeciesReference

310342
units: 756622
value: 0.0
type: LocalParameter

309692
value: 0.0
type: LocalParameter

814611
stoichiometry: 1.0
species: 301759
type: SpeciesReference

310568
units: 756622
value: 0.0
type: LocalParameter

777336
stoichiometry: 1.0
species: 300160
type: SpeciesReference

307786
units: 756574
value: 0.0
type: LocalParameter

805477
stoichiometry: 1.0
species: 301394
type: SpeciesReference

306117
units: 756574
value: 999999.0
type: LocalParameter

308739
units: 756574
value: 999999.0
type: LocalParameter

757945
stoichiometry: 1.0
species: 300332
type: SpeciesReference

307611
value: 0.0
type: LocalParameter

304523
kinetic law: 813531
product: 813519
reactant: 813507
notes: Abbreviation: R_NCAMUP EC Number: SUBSYSTEM: Transport_cofactor Equation: M_ncam[e] --> M_ncam[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: false
name: R_NCAMUP
type: Reaction

307764
units: 756622
value: 0.0
type: LocalParameter

307100
units: 756574
value: 999999.0
type: LocalParameter

309140
units: 756574
value: 999999.0
type: LocalParameter

301637
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Oxidized_thioredoxin_X
type: Species

310264
value: 0.0
type: LocalParameter

813338
stoichiometry: 1.0
species: 301625
type: SpeciesReference

299998
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: 1_dodecanoyl_sn_glycerol_3_phosphate_C15H29O7P1
type: Species

806274
stoichiometry: 1.0
species: 300662
type: SpeciesReference

793013
stoichiometry: 1.0
species: 300903
type: SpeciesReference

300699
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: D_Erythrose_4_phosphate_C4H7O7P
type: Species

760755
stoichiometry: 1.0
species: 300907
type: SpeciesReference

791820
stoichiometry: 1.0
species: 300911
type: SpeciesReference

310341
value: 0.0
type: LocalParameter

305700
units: 756574
value: 0.0
type: LocalParameter

762697
stoichiometry: 1.0
species: 300911
type: SpeciesReference

309481
units: 756574
value: 999999.0
type: LocalParameter

307785
units: 756622
value: 0.0
type: LocalParameter

309589
units: 756622
value: 0.0
type: LocalParameter

306118
value: 0.0
type: LocalParameter

763905
stoichiometry: 1.0
species: 300911
type: SpeciesReference

303143
type: Reaction
notes: Abbreviation: R_DAGK120 EC Number: 2.7.1.107 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_12dgr120[c] + M_atp[c] --> M_adp[c] + M_h[c] + M_pa120[c] genes: LOCUS:PF14_0681# LOCUS:PFI1485c# proteins: GENE ASSOCIATION: (PF14_0681) or (PFI1485c)
kinetic law: 785546
reactant: 785485
name: diacylglycerol_kinase
fast: false
reversible: false
product: 785510
reactant: 785498
product: 785522
product: 785534

765497
stoichiometry: 1.0
species: 300512
type: SpeciesReference

309694
units: 756574
value: 0.0
type: LocalParameter

814950
stoichiometry: 1.0
species: 300154
type: SpeciesReference

302593
kinetic law: 773322
product: 773310
reactant: 773298
notes: Abbreviation: R_EX_lys_L_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_lys_L <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_lys_L_e_
type: Reaction

811557
stoichiometry: 1.0
species: 300330
type: SpeciesReference

773007
stoichiometry: 1.0
species: 300986
type: SpeciesReference

308885
units: 756622
value: 0.0
type: LocalParameter

780645
stoichiometry: 1.0
species: 300368
type: SpeciesReference

305563
units: 756574
value: 0.0
type: LocalParameter

763421
stoichiometry: 1.0
species: 300909
type: SpeciesReference

309480
units: 756574
value: -999999.0
type: LocalParameter

310566
value: 0.0
type: LocalParameter

801838
stoichiometry: 1.0
species: 300404
type: SpeciesReference

300540
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Cysteine_C3H7NO2S
type: Species

761010
stoichiometry: 1.0
species: 301416
type: SpeciesReference

309370
units: 756574
value: -999999.0
type: LocalParameter

804799
stoichiometry: 1.0
species: 300911
type: SpeciesReference

310262
units: 756574
value: 999999.0
type: LocalParameter

780045
stoichiometry: 1.0
species: 301631
type: SpeciesReference

301787
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Arginine_C6H15N4O2
type: Species

305562
units: 756622
value: 0.0
type: LocalParameter

302885
reversible: false
notes: Abbreviation: R_EAR120x_ap EC Number: 1.3.1.9 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M_nadh[ap] + M_tddec2eACP[ap] --> M_ddcaACP[ap] + M_nad[ap] genes: LOCUS:PFF0730c# proteins: GENE ASSOCIATION: (PFF0730c)
kinetic law: 779356
fast: false
type: Reaction
name: enoyl-[acyl-carrier-protein]_reductase_(NADH)
reactant: 779308
product: 779344
product: 779332
reactant: 779320
reactant: 779296

307211
units: 756574
value: 0.0
type: LocalParameter

787506
stoichiometry: 1.0
species: 301533
type: SpeciesReference

306533
value: 0.0
type: LocalParameter

303203
product: 786915
reactant: 786891
type: Reaction
notes: Abbreviation: R_PSD160 EC Number: 4.1.1.65 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_h[c] + M_ps160[c] --> M[c] o2[c] + M_pe160[c] genes: LOCUS:PFI1370c# proteins: GENE ASSOCIATION: (PFI1370c)
name: Phosphatidylserine_decarboxylase
kinetic law: 786939
fast: false
reactant: 786903
product: 786927
reversible: false

307352
units: 756574
value: 0.0
type: LocalParameter

309584
units: 756574
value: -999999.0
type: LocalParameter

300955
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: hexacosanoate_n_C260_C26H51O2
type: Species

307766
units: 756574
value: 999999.0
type: LocalParameter

306119
units: 756622
value: 0.0
type: LocalParameter

309697
value: 0.0
type: LocalParameter

781575
stoichiometry: 6.0
species: 301146
type: SpeciesReference

310261
units: 756574
value: -999999.0
type: LocalParameter

310499
units: 756574
value: 999999.0
type: LocalParameter

796916
stoichiometry: 1.0
species: 300040
type: SpeciesReference

305456
units: 756574
value: 999999.0
type: LocalParameter

786113
stoichiometry: 1.0
species: 301416
type: SpeciesReference

300274
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: rotein-linke
type: Species

309298
units: 756574
value: -999999.0
type: LocalParameter

811337
stoichiometry: 1.0
species: 301388
type: SpeciesReference

306534
units: 756622
value: 0.0
type: LocalParameter

303401
product: 791759
fast: false
product: 791747
product: 791735
name: phospholipase_A2
reactant: 791711
reactant: 791723
kinetic law: 791771
type: Reaction
notes: Abbreviation: R_PLIPA2A141pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa141[c] --> M_1tdec7eg3p[c] + M_h[c] + M_ttdcea[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
reversible: false

302482
kinetic law: 771897
product: 771885
reactant: 771873
notes: Abbreviation: R_EX_din_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_din <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_din_e_
type: Reaction

301789
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Asparagine_C4H8N2O3
type: Species

307351
units: 756622
value: 0.0
type: LocalParameter

307210
units: 756622
value: 0.0
type: LocalParameter

766545
stoichiometry: 1.0
species: 300911
type: SpeciesReference

784355
stoichiometry: 0.01
species: 300556
type: SpeciesReference

792663
stoichiometry: 1.0
species: 301348
type: SpeciesReference

789099
stoichiometry: 1.0
species: 299974
type: SpeciesReference

307765
units: 756574
value: 0.0
type: LocalParameter

300825
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Glutamate_5_semialdehyde_C5H9NO3
type: Species

302840
kinetic law: 778267
reactant: 778219
product: 778243
reactant: 778207
name: beta-ketoacyl-acyl-carrier-protein_synthase_I
fast: false
product: 778231
product: 778255
reactant: 778195
notes: Abbreviation: R_3OAS160_ap EC Number: 2.3.1.41 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M[m] alACP[ap] + M[m] yrsACP[ap] --> M_3opalmACP[ap] + M_ACP[ap] + M[c] o2[ap] genes: LOCUS:PFB0505c# LOCUS:PFF1275c# proteins: GENE ASSOCIATION: (PFB0505c) or (PFF1275c)
reversible: false
type: Reaction

309696
units: 756574
value: 999999.0
type: LocalParameter

784982
stoichiometry: 1.0
species: 301140
type: SpeciesReference

309583
units: 756622
value: 0.0
type: LocalParameter

306820
units: 756574
value: -999999.0
type: LocalParameter

300542
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: L_Cysteine_C3H7NO2S
type: Species

796856
stoichiometry: 1.0
species: 300038
type: SpeciesReference

310260
units: 756622
value: 0.0
type: LocalParameter

781683
stoichiometry: 1.0
species: 301070
type: SpeciesReference

763577
stoichiometry: 1.0
species: 300903
type: SpeciesReference

309297
units: 756622
value: 0.0
type: LocalParameter

813229
stoichiometry: 1.0
species: 300984
type: SpeciesReference

782869
stoichiometry: 1.0
species: 300130
type: SpeciesReference

301785
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Alanine_C3H7NO2
type: Species

301908
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Ammonium_H4N
type: Species

765147
stoichiometry: 1.0
species: 301198
type: SpeciesReference

302485
kinetic law: 771933
product: 771921
reactant: 771909
notes: Abbreviation: R_EX_duri_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_duri <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_duri_e_
type: Reaction

309699
units: 756622
value: 0.0
type: LocalParameter

303140
reactant: 785425
product: 785461
product: 785449
name: diacylglycerol_cholinephosphotransferase
kinetic law: 785473
product: 785437
fast: false
reactant: 785413
notes: Abbreviation: R_DAGCPT EC Number: 2.7.8.2 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism Equation: (0.01) M_dag[c] + M[c] dpchol[c] --> M[c] mp[c] + M_h[c] + (0.01) M_pc[c] genes: LOCUS:PFF1375c# proteins: GENE ASSOCIATION: (PFF1375c)
type: Reaction
reversible: false

304307
reversible: true
name: R_THRt2r
fast: false
product: 810654
reactant: 810617
notes: Abbreviation: R_THRt2r EC Number: SUBSYSTEM: Transport_aa Equation: M_h[e] + M_thr_L[e] <==> M_h[c] + M_thr_L[c] genes: LOCUS:PFF1430c# LOCUS:PFL0420w# LOCUS:PFL1515c# LOCUS:PFB0435c# LOCUS:PFE0775c# LOCUS:PF11_0334# proteins: GENE ASSOCIATION: (PFF1430c) or (PFL0420w) or (PFL1515c) or (PFB0435c) or (PFE0775c) or (PF11_0334)
reactant: 810629
kinetic law: 810666
type: Reaction
product: 810642

300953
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: Hexanoyl_ACP_n_C60ACP_C17H31N2O8PRS
type: Species

305168
units: 756574
value: 999999.0
type: LocalParameter

309586
units: 756574
value: 999999.0
type: LocalParameter

310497
units: 756574
value: -999999.0
type: LocalParameter

300951
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: all_trans_Heptaprenyl_diphosphate_C35H57O7P2
type: Species

305703
units: 756574
value: 999999.0
type: LocalParameter

306821
units: 756574
value: 999999.0
type: LocalParameter

300272
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: acyl_carrier_protein_C11H21N2O7PRS
type: Species

309371
units: 756574
value: 999999.0
type: LocalParameter

803938
stoichiometry: 1.0
species: 301442
type: SpeciesReference

798437
stoichiometry: 1.0
species: 301012
type: SpeciesReference

304529
kinetic law: 813628
product: 813616
reactant: 813604
notes: Abbreviation: R_PYDAMtr EC Number: SUBSYSTEM: Transport_cofactor Equation: M_pydam[e] <==> M_pydam[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PYDAMtr
type: Reaction

302882
notes: Abbreviation: R_EAR100x_ap EC Number: 1.3.1.9 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M_nadh[ap] + M_tdec2eACP[ap] --> M_dcaACP[ap] + M_nad[ap] genes: LOCUS:PFF0730c# proteins: GENE ASSOCIATION: (PFF0730c)
reactant: 779236
fast: false
product: 779260
type: Reaction
reversible: false
kinetic law: 779284
product: 779272
reactant: 779224
name: enoyl-[acyl-carrier-protein]_reductase_(NADH)
reactant: 779248

804508
stoichiometry: 1.0
species: 301256
type: SpeciesReference

304184
fast: false
reactant: 808264
name: R_PIt2r
notes: Abbreviation: R_PIt2r EC Number: SUBSYSTEM: Transport Equation: M_h[e] + M_pi[e] <==> M_h[c] + M_pi[c] genes: LOCUS:MAL13P1_206# proteins: GENE ASSOCIATION: (MAL13P1_206)
reversible: true
product: 808300
reactant: 808276
kinetic law: 808312
product: 808288
type: Reaction

811448
stoichiometry: 1.0
species: 301420
type: SpeciesReference

303512
product: 794407
fast: false
name: phosphatidylglycerophosphatase
reversible: false
reactant: 794383
product: 794395
notes: Abbreviation: R_PGPP140 EC Number: 3.1.3.27 SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M_h2o[c] + M_pgp140[c] --> M_pg140[c] + M_pi[c] genes: proteins: GENE ASSOCIATION:
kinetic law: 794419
type: Reaction
reactant: 794371

777627
stoichiometry: 1.0
species: 300176
type: SpeciesReference

307789
value: 0.0
type: LocalParameter

309296
value: 0.0
type: LocalParameter

303200
name: Phosphatidylserine_decarboxylase
product: 786854
kinetic law: 786879
reversible: false
reactant: 786830
notes: Abbreviation: R_PSD141 EC Number: 4.1.1.65 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_h[c] + M_ps141[c] --> M[c] o2[c] + M_pe141[c] genes: LOCUS:PFI1370c# proteins: GENE ASSOCIATION: (PFI1370c)
product: 786867
fast: false
reactant: 786842
type: Reaction

806009
stoichiometry: 2.0
species: 300915
type: SpeciesReference

782941
stoichiometry: 1.0
species: 300901
type: SpeciesReference

782431
stoichiometry: 1.0
species: 301070
type: SpeciesReference

306532
units: 756574
value: 999999.0
type: LocalParameter

300823
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Glutaminyl_tRNA_Gln_C5H9N2O2R
type: Species

770289
stoichiometry: 1.0
species: 300915
type: SpeciesReference

777228
stoichiometry: 1.0
species: 300126
type: SpeciesReference

305167
units: 756574
value: 0.0
type: LocalParameter

307767
value: 0.0
type: LocalParameter

778702
stoichiometry: 1.0
species: 300300
type: SpeciesReference

788655
stoichiometry: 1.0
species: 300008
type: SpeciesReference

303518
reactant: 794491
product: 794527
reactant: 794503
product: 794515
kinetic law: 794539
notes: Abbreviation: R_PGPP141 EC Number: 3.1.3.27 SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M_h2o[c] + M_pgp141[c] --> M_pg141[c] + M_pi[c] genes: proteins: GENE ASSOCIATION:
name: phosphatidylglycerophosphatase
type: Reaction
fast: false
reversible: false

304181
type: Reaction
notes: Abbreviation: R_OXAHCOtex EC Number: SUBSYSTEM: Transport Equation: (2.0) M_hco3[c] + M_oxa[e] --> (2.0) M_hco3[e] + M_oxa[c] genes: proteins: GENE ASSOCIATION:
reversible: false
product: 808240
product: 808228
kinetic law: 808252
name: R_OXAHCOtex
fast: false
reactant: 808216
reactant: 808204

301783
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: 2_Oxoglutarate_C5H4O5
type: Species

799245
stoichiometry: 1.0
species: 300903
type: SpeciesReference

795950
stoichiometry: 1.0
species: 300951
type: SpeciesReference

310496
units: 756622
value: 0.0
type: LocalParameter

771704
stoichiometry: 1.0
species: 301808
type: SpeciesReference

802237
stoichiometry: 1.0
species: 300414
type: SpeciesReference

309580
units: 756574
value: 999999.0
type: LocalParameter

301906
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Nicotinate_C6H4NO2
type: Species

304301
type: Reaction
name: R_THRGLNexR
reversible: true
reactant: 810509
product: 810533
kinetic law: 810545
reactant: 810497
product: 810521
notes: Abbreviation: R_THRGLNexR EC Number: SUBSYSTEM: Transport_aa Equation: M_gln_L[c] + M_thr_L[e] <==> M_gln_L[e] + M_thr_L[c] genes: LOCUS:PFF1430c# LOCUS:PFL0420w# LOCUS:PFL1515c# LOCUS:PFB0435c# LOCUS:PFE0775c# LOCUS:PF11_0334# proteins: GENE ASSOCIATION: (PFF1430c) or (PFL0420w) or (PFL1515c) or (PFB0435c) or (PFE0775c) or (PF11_0334)
fast: false

300959
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: hexacosanoate_n_C260_C26H51O2
type: Species

307356
units: 756622
value: 0.0
type: LocalParameter

306268
value: 0.0
type: LocalParameter

306537
units: 756574
value: 999999.0
type: LocalParameter

772503
stoichiometry: 1.0
species: 301852
type: SpeciesReference

773748
stoichiometry: 1.0
species: 301920
type: SpeciesReference

803551
stoichiometry: 1.0
species: 300911
type: SpeciesReference

780900
stoichiometry: 1.0
species: 300368
type: SpeciesReference

310112
units: 756574
value: -999999.0
type: LocalParameter

302888
type: Reaction
kinetic law: 779428
reversible: false
fast: false
reactant: 779380
name: enoyl-[acyl-carrier-protein]_reductase_(NADH)
notes: Abbreviation: R_EAR121x_ap EC Number: 1.3.1.9 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M_nadh[ap] + M_t3c5ddeceACP[ap] --> M[c] ddec5eACP[ap] + M_nad[ap] genes: LOCUS:PFF0730c# proteins: GENE ASSOCIATION: (PFF0730c)
reactant: 779392
reactant: 779368
product: 779404
product: 779416

300278
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L-Cystine_C6H12N2O4S2
type: Species

768570
stoichiometry: 1.0
species: 300711
type: SpeciesReference

306936
units: 756622
value: 0.0
type: LocalParameter

306823
value: 0.0
type: LocalParameter

310495
value: 0.0
type: LocalParameter

803406
stoichiometry: 1.0
species: 300332
type: SpeciesReference

780203
stoichiometry: 1.0
species: 300592
type: SpeciesReference

796275
stoichiometry: 1.0
species: 301148
type: SpeciesReference

306269
units: 756622
value: 0.0
type: LocalParameter

305706
value: 0.0
type: LocalParameter

300821
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Glutamine_C5H10N2O3
type: Species

306937
units: 756574
value: -999999.0
type: LocalParameter

307769
units: 756622
value: 0.0
type: LocalParameter

812065
stoichiometry: 1.0
species: 300520
type: SpeciesReference

791298
stoichiometry: 1.0
species: 300777
type: SpeciesReference

309294
units: 756574
value: 999999.0
type: LocalParameter

811824
stoichiometry: 1.0
species: 300244
type: SpeciesReference

302149
kinetic law: 762818
product: 762806
reactant: 762794
notes: Abbreviation: R_PGI EC Number: 5.3.1.9 SUBSYSTEM: Carbohydrates_Glycolysis Equation: M_g6p[c] <==> M_f6p[c] genes: LOCUS:PF14_0341# proteins: GENE ASSOCIATION: (PF14_0341)
fast: false
reversible: true
name: Glucose-6-phosphate_isomerase
type: Reaction

303206
name: Phosphatidylserine_decarboxylase
product: 786988
reversible: false
product: 786975
type: Reaction
reactant: 786951
notes: Abbreviation: R_PSD161 EC Number: 4.1.1.65 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_h[c] + M_ps161[c] --> M[c] o2[c] + M_pe161[c] genes: LOCUS:PFI1370c# proteins: GENE ASSOCIATION: (PFI1370c)
fast: false
reactant: 786963
kinetic law: 787000

306538
value: 0.0
type: LocalParameter

763208
stoichiometry: 1.0
species: 301134
type: SpeciesReference

767763
stoichiometry: 1.0
species: 301426
type: SpeciesReference

301781
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Adenosine_C10H13N5O4
type: Species

790439
stoichiometry: 2.0
species: 300911
type: SpeciesReference

310111
units: 756622
value: 0.0
type: LocalParameter

761444
stoichiometry: 1.0
species: 301645
type: SpeciesReference

810872
stoichiometry: 1.0
species: 300660
type: SpeciesReference

309582
value: 0.0
type: LocalParameter

770349
stoichiometry: 0.5
species: 301190
type: SpeciesReference

306824
units: 756622
value: 0.0
type: LocalParameter

305459
value: 0.0
type: LocalParameter

305709
units: 756622
value: 0.0
type: LocalParameter

300957
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: hexacosanoate_n_C260_C26H51O2
type: Species

306938
units: 756574
value: 999999.0
type: LocalParameter

301904
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Methionine_C5H11NO2S
type: Species

762505
stoichiometry: 1.0
species: 300414
type: SpeciesReference

303515
kinetic law: 794479
reactant: 794431
fast: false
notes: Abbreviation: R_PGPP140pp EC Number: 3.1.3.27 SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M_h2o[c] + M_pgp140[c] --> M_pg140[c] + M_pi[c] genes: proteins: GENE ASSOCIATION:
product: 794455
reversible: false
type: Reaction
name: phosphatidylglycerophosphatase
product: 794467
reactant: 794443

306535
units: 756574
value: -999999.0
type: LocalParameter

308731
units: 756622
value: 0.0
type: LocalParameter

309293
units: 756574
value: -999999.0
type: LocalParameter

307354
value: 0.0
type: LocalParameter

300690
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: dUTP_C9H11N2O14P3
type: Species

300276
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L-Cystine_C6H12N2O4S2
type: Species

759730
stoichiometry: 1.0
species: 300514
type: SpeciesReference

310110
value: 0.0
type: LocalParameter

798293
stoichiometry: 1.0
species: 301390
type: SpeciesReference

310493
units: 756574
value: 999999.0
type: LocalParameter

306939
value: 0.0
type: LocalParameter

304304
kinetic law: 810605
type: Reaction
name: R_THRGLYexR
reversible: true
product: 810593
notes: Abbreviation: R_THRGLYexR EC Number: SUBSYSTEM: Transport_aa Equation: M_gly[c] + M_thr_L[e] <==> M_gly[e] + M_thr_L[c] genes: LOCUS:PFF1430c# LOCUS:PFL0420w# LOCUS:PFL1515c# LOCUS:PFB0435c# LOCUS:PFE0775c# LOCUS:PF11_0334# proteins: GENE ASSOCIATION: (PFF1430c) or (PFL0420w) or (PFL1515c) or (PFB0435c) or (PFE0775c) or (PF11_0334)
reactant: 810557
product: 810581
reactant: 810569
fast: false

761828
stoichiometry: 1.0
species: 300308
type: SpeciesReference

785750
stoichiometry: 1.0
species: 301276
type: SpeciesReference

307353
units: 756574
value: 999999.0
type: LocalParameter

309292
units: 756622
value: 0.0
type: LocalParameter

757909
stoichiometry: 1.0
species: 300414
type: SpeciesReference

302147
kinetic law: 762782
name: 6-phosphofructokinase
reversible: false
product: 762769
type: Reaction
product: 762757
reactant: 762721
notes: Abbreviation: R_PFK_2 EC Number: 2.7.1.11 SUBSYSTEM: Carbohydrates_Glycolysis Equation: M_atp[c] + M_tag6p_D[c] --> M_adp[c] + M_h[c] + M_tagdp_D[c] genes: LOCUS:PF11_0294# LOCUS:PFI0755c# proteins: GENE ASSOCIATION: (PF11_0294) or (PFI0755c)
product: 762745
fast: false
reactant: 762733

308732
units: 756574
value: 0.0
type: LocalParameter

306265
units: 756574
value: 0.0
type: LocalParameter

771292
stoichiometry: 1.0
species: 300354
type: SpeciesReference

306687
units: 756622
value: 0.0
type: LocalParameter

307903
units: 756574
value: 999999.0
type: LocalParameter

302157
product: 763001
product: 763013
reversible: false
reactant: 762964
name: aldehyde_reductase
fast: false
type: Reaction
reactant: 762988
kinetic law: 763025
reactant: 762976
notes: Abbreviation: R_SBTR EC Number: 1.1.1.21 SUBSYSTEM: Carbohydrates_PyruvateMetabolism ; Carbohydrates_Glycolysis Equation: M_glc_D[c] + M_h[c] + M_nadph[c] --> M_nadp[c] + M_sbt_D[c] genes: LOCUS:MAL13P1_324# proteins: GENE ASSOCIATION: (MAL13P1_324)

304310
kinetic law: 810726
notes: Abbreviation: R_TRPt2r EC Number: SUBSYSTEM: Transport_aa Equation: M_h[e] + M_trp_L[e] <==> M_h[c] + M_trp_L[c] genes: LOCUS:PFF1430c# LOCUS:PFL0420w# LOCUS:PFL1515c# LOCUS:PFB0435c# LOCUS:PFE0775c# LOCUS:PF11_0334# proteins: GENE ASSOCIATION: (PFF1430c) or (PFL0420w) or (PFL1515c) or (PFB0435c) or (PFE0775c) or (PF11_0334)
product: 810714
fast: false
reversible: true
name: R_TRPt2r
reactant: 810690
type: Reaction
reactant: 810678
product: 810702

310117
units: 756622
value: 0.0
type: LocalParameter

307218
value: 0.0
type: LocalParameter

301348
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphatidylglycerol_ditetradecanoyl_n_C140_C34H66O10P1
type: Species

307359
value: 0.0
type: LocalParameter

300548
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Cytidine_C9H13N3O5
type: Species

302849
fast: false
reactant: 778472
product: 778484
type: Reaction
reactant: 778448
kinetic law: 778521
name: beta-ketoacyl-acyl-carrier-protein_synthase_I
product: 778508
reactant: 778460
product: 778496
notes: Abbreviation: R_3OAS181_ap EC Number: 2.3.1.41 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M_hdeACP[ap] + M[m] alACP[ap] --> M_3ocvac11eACP[ap] + M_ACP[ap] + M[c] o2[ap] genes: LOCUS:PFB0505c# LOCUS:PFF1275c# proteins: GENE ASSOCIATION: (PFB0505c) or (PFF1275c)
reversible: false

776253
stoichiometry: 1.0
species: 300458
type: SpeciesReference

763360
stoichiometry: 1.0
species: 301344
type: SpeciesReference

817609
stoichiometry: 0.0437
species: 300536
type: SpeciesReference

777785
stoichiometry: 1.0
species: 301062
type: SpeciesReference

809968
stoichiometry: 1.0
species: 301038
type: SpeciesReference

805318
stoichiometry: 1.0
species: 301569
type: SpeciesReference

306529
units: 756622
value: 0.0
type: LocalParameter

767065
stoichiometry: 1.0
species: 300903
type: SpeciesReference

301098
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1D-myo-Inositol 1,3,4-trisphosphate_C6H9O15P3
type: Species

306264
units: 756622
value: 0.0
type: LocalParameter

310118
units: 756574
value: -999999.0
type: LocalParameter

767354
stoichiometry: 1.0
species: 300644
type: SpeciesReference

309366
units: 756574
value: 999999.0
type: LocalParameter

813873
stoichiometry: 1.0
species: 300745
type: SpeciesReference

309479
units: 756622
value: 0.0
type: LocalParameter

785316
stoichiometry: 1.0
species: 301416
type: SpeciesReference

301234
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: all_trans_Octaprenyl_diphosphate_C40H65O7P2
type: Species

807914
stoichiometry: 1.0
species: 301170
type: SpeciesReference

301914
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Nitrite_NO2
type: Species

306686
value: 0.0
type: LocalParameter

302479
kinetic law: 771861
product: 771849
reactant: 771837
notes: Abbreviation: R_EX_dgsn_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_dgsn <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_dgsn_e_
type: Reaction

303857
name: purine-nucleoside_phosphorylase
type: Reaction
notes: Abbreviation: R_PUNP6 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotides_PurineMetabolism ; AminoAcids_MetPolyamineMetabolism Equation: M_din[c] + M_pi[c] <==> M_2dr1p[c] + M_hxan[c] genes: LOCUS:PFE0660c# proteins: GENE ASSOCIATION: (PFE0660c)
product: 801694
kinetic law: 801706
product: 801682
reactant: 801670
fast: false
reactant: 801658
reversible: true

817755
stoichiometry: 0.06241
species: 300885
type: SpeciesReference

782008
stoichiometry: 1.0
species: 300270
type: SpeciesReference

787397
stoichiometry: 1.0
species: 301450
type: SpeciesReference

773455
stoichiometry: 1.0
species: 301904
type: SpeciesReference

788316
stoichiometry: 1.0
species: 300851
type: SpeciesReference

768787
stoichiometry: 1.0
species: 301390
type: SpeciesReference

310044
value: 0.0
type: LocalParameter

814503
stoichiometry: 1.0
species: 301334
type: SpeciesReference

304748
kinetic law: 816739
product: 816727
reactant: 816715
notes: Abbreviation: R_4MHETZtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_4mhetz[m] <==> M_4mhetz[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_4MHETZtmt
type: Reaction

808591
stoichiometry: 2.0
species: 301547
type: SpeciesReference

307905
value: 0.0
type: LocalParameter

764738
stoichiometry: 1.0
species: 300522
type: SpeciesReference

307357
units: 756574
value: 0.0
type: LocalParameter

766765
stoichiometry: 1.0
species: 301605
type: SpeciesReference

302155
kinetic law: 762952
product: 762940
reactant: 762927
notes: Abbreviation: R_PGMT EC Number: 5.4.2.2 SUBSYSTEM: Carbohydrates_Glycolysis ; Carbohydrates_PentosePhosphateCycle Equation: M_g1p[c] <==> M_g6p[c] genes: LOCUS:PF10_0122# proteins: GENE ASSOCIATION: (PF10_0122)
fast: false
reversible: true
name: Phosphoglucomutase
type: Reaction

300128
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

306528
value: 0.0
type: LocalParameter

300819
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Glutamine_C5H10N2O3
type: Species

771123
stoichiometry: 1.0
species: 301775
type: SpeciesReference

306267
units: 756574
value: 999999.0
type: LocalParameter

792085
stoichiometry: 1.0
species: 301306
type: SpeciesReference

306685
units: 756574
value: 999999.0
type: LocalParameter

309367
value: 0.0
type: LocalParameter

307216
units: 756574
value: 0.0
type: LocalParameter

301346
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphatidylglycerol_didodecanoyl_n_C120_C30H58O10P1
type: Species

310041
units: 756574
value: -999999.0
type: LocalParameter

782214
stoichiometry: 1.0
species: 300849
type: SpeciesReference

763796
stoichiometry: 1.0
species: 301078
type: SpeciesReference

786830
stoichiometry: 1.0
species: 300911
type: SpeciesReference

798594
stoichiometry: 1.0
species: 300757
type: SpeciesReference

307906
units: 756622
value: 0.0
type: LocalParameter

802031
stoichiometry: 1.0
species: 301416
type: SpeciesReference

309078
units: 756574
value: 0.0
type: LocalParameter

788438
stoichiometry: 1.0
species: 300000
type: SpeciesReference

309139
units: 756574
value: 0.0
type: LocalParameter

310114
units: 756574
value: 999999.0
type: LocalParameter

758775
stoichiometry: 1.0
species: 301416
type: SpeciesReference

757518
stoichiometry: 1.0
species: 300410
type: SpeciesReference

807938
stoichiometry: 1.0
species: 301168
type: SpeciesReference

798884
stoichiometry: 1.0
species: 300414
type: SpeciesReference

782092
stoichiometry: 1.0
species: 300849
type: SpeciesReference

304745
kinetic law: 816703
product: 816691
reactant: 816679
notes: Abbreviation: R_DXYL5Ptap EC Number: SUBSYSTEM: Transport_AP Equation: M_dxyl5p[ap] <==> M_dxyl5p[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_DXYL5Ptap
type: Reaction

306527
units: 756574
value: 999999.0
type: LocalParameter

303854
kinetic law: 801646
notes: Abbreviation: R_PUNP5 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotides_PurineMetabolism ; AminoAcids_MetPolyamineMetabolism Equation: M_ins[c] + M_pi[c] <==> M_hxan[c] + M_r1p[c] genes: LOCUS:PFE0660c# proteins: GENE ASSOCIATION: (PFE0660c)
product: 801634
fast: false
reactant: 801598
reactant: 801610
name: purine-nucleoside_phosphorylase
product: 801622
reversible: true
type: Reaction

301232
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: all_trans_Octaprenyl_diphosphate_C40H65O7P2
type: Species

777445
stoichiometry: 1.0
species: 300144
type: SpeciesReference

772791
stoichiometry: 1.0
species: 300897
type: SpeciesReference

307217
units: 756574
value: 999999.0
type: LocalParameter

301912
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Nitric_oxide_NO
type: Species

307358
units: 756574
value: 999999.0
type: LocalParameter

300949
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

768268
stoichiometry: 1.0
species: 301422
type: SpeciesReference

305160
units: 756574
value: 999999.0
type: LocalParameter

785044
stoichiometry: 1.0
species: 300901
type: SpeciesReference

309590
units: 756574
value: -999999.0
type: LocalParameter

307907
units: 756574
value: 0.0
type: LocalParameter

760067
stoichiometry: 1.0
species: 300360
type: SpeciesReference

310042
units: 756574
value: 999999.0
type: LocalParameter

817779
stoichiometry: 0.1063
species: 300965
type: SpeciesReference

310115
value: 0.0
type: LocalParameter

302153
kinetic law: 762915
product: 762903
reactant: 762891
notes: Abbreviation: R_PGM EC Number: 5.4.2.1 SUBSYSTEM: Carbohydrates_Glycolysis Equation: M_2pg[c] <==> M_3pg[c] genes: LOCUS:PF11_0208# LOCUS:PFD0660w# proteins: GENE ASSOCIATION: (PF11_0208) or (PFD0660w)
fast: false
reversible: true
name: Phosphoglycerate_mutase
type: Reaction

302474
kinetic law: 771788
product: 771776
reactant: 771764
notes: Abbreviation: R_EX_dcyt_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_dcyt <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_dcyt_e_
type: Reaction

784511
stoichiometry: 1.0
species: 300911
type: SpeciesReference

300817
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: D_Gluconate_C6H11O7
type: Species

306683
units: 756574
value: -999999.0
type: LocalParameter

762964
stoichiometry: 1.0
species: 300813
type: SpeciesReference

812283
stoichiometry: 1.0
species: 300723
type: SpeciesReference

309076
value: 0.0
type: LocalParameter

792386
stoichiometry: 1.0
species: 299978
type: SpeciesReference

800896
stoichiometry: 1.0
species: 301390
type: SpeciesReference

774003
stoichiometry: 1.0
species: 301934
type: SpeciesReference

817041
stoichiometry: 4.0
species: 300819
type: SpeciesReference

788884
stoichiometry: 1.0
species: 300903
type: SpeciesReference

300282
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Lipid
type: Species

771921
stoichiometry: 1.0
species: 301820
type: SpeciesReference

799810
stoichiometry: 1.0
species: 301390
type: SpeciesReference

797916
stoichiometry: 1.0
species: 299950
type: SpeciesReference

793465
stoichiometry: 1.0
species: 300903
type: SpeciesReference

306682
units: 756622
value: 0.0
type: LocalParameter

302041
kinetic law: 758933
reactant: 758885
name: 3-hydroxyisobutyryl-CoA_hydrolase
fast: false
product: 758897
product: 758909
reversible: false
type: Reaction
reactant: 758873
notes: Abbreviation: R_HIBHr EC Number: 3.1.2.4 SUBSYSTEM: AminoAcids_LeuIleValMetabolism Equation: M_h2o[c] + M_hibcoa[c] --> M_3hmp[c] + M[c] oa[c] + (2.0) M_h[c] genes: LOCUS:PFL1940w# proteins: GENE ASSOCIATION: (PFL1940w)
product: 758921

307215
units: 756622
value: 0.0
type: LocalParameter

301910
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Nicotinamide_C6H6N2O
type: Species

305166
units: 756622
value: 0.0
type: LocalParameter

766861
stoichiometry: 1.0
species: 300911
type: SpeciesReference

301230
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: octanoate_n_C80_C8H15O2
type: Species

767814
stoichiometry: 1.0
species: 301190
type: SpeciesReference

306260
units: 756574
value: 0.0
type: LocalParameter

307909
units: 756574
value: 999999.0
type: LocalParameter

300126
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

763133
stoichiometry: 1.0
species: 301136
type: SpeciesReference

816679
stoichiometry: 1.0
species: 300692
type: SpeciesReference

309077
units: 756622
value: 0.0
type: LocalParameter

802780
stoichiometry: 1.0
species: 300414
type: SpeciesReference

300544
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Cysteinyl_tRNA_Cys_C3H6NOSR
type: Species

809740
stoichiometry: 1.0
species: 300829
type: SpeciesReference

309362
value: 0.0
type: LocalParameter

310040
units: 756622
value: 0.0
type: LocalParameter

302846
type: Reaction
reactant: 778364
name: beta-ketoacyl-acyl-carrier-protein_synthase_I
product: 778424
reversible: false
kinetic law: 778436
notes: Abbreviation: R_3OAS180_ap EC Number: 2.3.1.41 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M[m] alACP[ap] + M_palmACP[ap] --> M_3ooctdACP[ap] + M_ACP[ap] + M[c] o2[ap] genes: LOCUS:PFB0505c# LOCUS:PFF1275c# proteins: GENE ASSOCIATION: (PFB0505c) or (PFF1275c)
product: 778400
product: 778412
reactant: 778376
fast: false
reactant: 778388

806419
stoichiometry: 1.0
species: 300202
type: SpeciesReference

300546
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Cytidine_C9H13N3O5
type: Species

300815
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: D_Glucose_C6H12O6
type: Species

813799
stoichiometry: 1.0
species: 300913
type: SpeciesReference

303851
reactant: 801550
reactant: 801538
type: Reaction
kinetic law: 801586
product: 801574
reversible: true
name: purine-nucleoside_phosphorylase
fast: false
notes: Abbreviation: R_PUNP4 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotides_PurineMetabolism ; AminoAcids_MetPolyamineMetabolism Equation: M_dgsn[c] + M_pi[c] <==> M_2dr1p[c] + M_gua[c] genes: LOCUS:PFE0660c# proteins: GENE ASSOCIATION: (PFE0660c)
product: 801562

783013
stoichiometry: 1.0
species: 300142
type: SpeciesReference

306681
value: 0.0
type: LocalParameter

305163
value: 0.0
type: LocalParameter

302151
fast: false
kinetic law: 762878
reversible: true
product: 762854
notes: Abbreviation: R_PGK EC Number: 2.7.2.3 SUBSYSTEM: Carbohydrates_Glycolysis Equation: M_3pg[c] + M_atp[c] <==> M_13dpg[c] + M_adp[c] genes: LOCUS:PFI1105w# proteins: GENE ASSOCIATION: (PFI1105w)
name: phosphoglycerate_kinase
type: Reaction
reactant: 762830
reactant: 762842
product: 762866

309363
units: 756622
value: 0.0
type: LocalParameter

795625
stoichiometry: 1.0
species: 300478
type: SpeciesReference

302476
kinetic law: 771825
product: 771813
reactant: 771800
notes: Abbreviation: R_EX_ddca_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_ddca <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_ddca_e_
type: Reaction

310119
units: 756574
value: 999999.0
type: LocalParameter

307212
units: 756574
value: 999999.0
type: LocalParameter

305018
units: 756574
value: 999999.0
type: LocalParameter

306263
value: 0.0
type: LocalParameter

309074
units: 756574
value: 999999.0
type: LocalParameter

812816
stoichiometry: 1.0
species: 300903
type: SpeciesReference

815023
stoichiometry: 1.0
species: 300224
type: SpeciesReference

757386
stoichiometry: 1.0
species: 300398
type: SpeciesReference

794697
stoichiometry: 1.0
species: 301352
type: SpeciesReference

300280
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Lipid
type: Species

764810
stoichiometry: 1.0
species: 301042
type: SpeciesReference

309364
units: 756574
value: -999999.0
type: LocalParameter

306680
units: 756574
value: 999999.0
type: LocalParameter

812961
stoichiometry: 1.0
species: 300588
type: SpeciesReference

302843
product: 778340
type: Reaction
product: 778328
notes: Abbreviation: R_3OAS161_ap EC Number: 2.3.1.41 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M[m] alACP[ap] + M_tdeACP[ap] --> M_3ocpalm9eACP[ap] + M_ACP[ap] + M[c] o2[ap] genes: LOCUS:PFB0505c# LOCUS:PFF1275c# proteins: GENE ASSOCIATION: (PFB0505c) or (PFF1275c)
product: 778316
name: beta-ketoacyl-acyl-carrier-protein_synthase_I
reactant: 778279
reactant: 778304
reversible: false
fast: false
reactant: 778292
kinetic law: 778352

779224
stoichiometry: 1.0
species: 300909
type: SpeciesReference

307213
value: 0.0
type: LocalParameter

306262
units: 756574
value: 999999.0
type: LocalParameter

304187
kinetic law: 808350
product: 808337
reactant: 808324
notes: Abbreviation: R_PPAt EC Number: SUBSYSTEM: Transport Equation: M_ppa[e] --> M_ppa[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: false
name: R_PPAt
type: Reaction

802453
stoichiometry: 1.0
species: 300332
type: SpeciesReference

300124
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

760453
stoichiometry: 1.0
species: 300250
type: SpeciesReference

787652
stoichiometry: 1.0
species: 301008
type: SpeciesReference

309289
units: 756574
value: 999999.0
type: LocalParameter

794853
stoichiometry: 1.0
species: 300903
type: SpeciesReference

810654
stoichiometry: 1.0
species: 301619
type: SpeciesReference

759513
stoichiometry: 1.0
species: 300148
type: SpeciesReference

770567
stoichiometry: 1.0
species: 300903
type: SpeciesReference

790657
stoichiometry: 1.0
species: 300911
type: SpeciesReference

310346
value: 0.0
type: LocalParameter

804386
stoichiometry: 1.0
species: 300911
type: SpeciesReference

787930
stoichiometry: 1.0
species: 300775
type: SpeciesReference

769733
stoichiometry: 1.0
species: 300480
type: SpeciesReference

799967
stoichiometry: 1.0
species: 301723
type: SpeciesReference

808362
stoichiometry: 1.0
species: 300913
type: SpeciesReference

309470
units: 756574
value: 999999.0
type: LocalParameter

307609
units: 756574
value: 999999.0
type: LocalParameter

760345
stoichiometry: 1.0
species: 301416
type: SpeciesReference

309133
units: 756574
value: 0.0
type: LocalParameter

761720
stoichiometry: 1.0
species: 301416
type: SpeciesReference

774112
stoichiometry: 1.0
species: 301940
type: SpeciesReference

301340
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: all_trans_Pentaprenyl_diphosphate_C25H41O7P2
type: Species

790862
stoichiometry: 1.0
species: 300775
type: SpeciesReference

766267
stoichiometry: 1.0
species: 300414
type: SpeciesReference

309072
units: 756622
value: 0.0
type: LocalParameter

305016
units: 756622
value: 0.0
type: LocalParameter

784620
stoichiometry: 1.0
species: 300216
type: SpeciesReference

303962
notes: Abbreviation: R_ASPCT EC Number: 2.1.3.2 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; AminoAcids_AsnAspMetabolism Equation: M_asp_L[c] + M[c] bp[c] --> M[c] basp[c] + M_h[c] + M_pi[c] genes: LOCUS:MAL13P1_221# proteins: GENE ASSOCIATION: (MAL13P1_221)
kinetic law: 804154
product: 804118
reactant: 804106
reactant: 804094
reversible: false
type: Reaction
product: 804130
name: aspartate_carbamoyltransferase
fast: false
product: 804142

307105
units: 756574
value: 999999.0
type: LocalParameter

302737
reversible: true
reactant: 775190
product: 775226
product: 775214
product: 775250
type: Reaction
notes: Abbreviation: R_lipid10 EC Number: SUBSYSTEM: Lipids Equation: M_pe[e] <==> M_pe120[e] + M_pe140[e] + M_pe141[e] + M_pe160[e] + M_pe161[e] + M_pe180[e] + M_pe181[e] genes: proteins: GENE ASSOCIATION:
fast: false
product: 775202
name: R_lipid10
product: 775238
kinetic law: 775286
product: 775274
product: 775262

805718
stoichiometry: 1.0
species: 301412
type: SpeciesReference

761996
stoichiometry: 1.0
species: 300306
type: SpeciesReference

799100
stoichiometry: 1.0
species: 301416
type: SpeciesReference

758885
stoichiometry: 1.0
species: 300963
type: SpeciesReference

300122
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

802189
stoichiometry: 1.0
species: 300674
type: SpeciesReference

781117
stoichiometry: 1.0
species: 300512
type: SpeciesReference

301090
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Methionyl_tRNA_Met_C5H10NOSR
type: Species

757494
stoichiometry: 1.0
species: 301651
type: SpeciesReference

309073
units: 756574
value: 0.0
type: LocalParameter

303368
notes: Abbreviation: R_LPLIPAL2E181 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2agpe181[c] + M_h2o[c] --> M_g3pe[c] + M_h[c] + M_ocdcea[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
reactant: 790923
reactant: 790911
reversible: false
type: Reaction
name: lysophospholipase
product: 790959
product: 790935
fast: false
kinetic law: 790971
product: 790947

302045
product: 759053
name: Isoleucine-tRNA_ligase
product: 759041
reactant: 759005
kinetic law: 759078
product: 759065
fast: false
notes: Abbreviation: R_ILETRS EC Number: 6.1.1.5 SUBSYSTEM: AminoAcids_LeuIleValMetabolism Equation: M_atp[c] + M_ile_L[c] + M_trnaile[c] --> M_amp[c] + M_iletrna[c] + M_ppi[c] genes: LOCUS:PF13_0179# proteins: GENE ASSOCIATION: (PF13_0179)
reversible: false
type: Reaction
reactant: 759029
reactant: 759017

305017
units: 756574
value: -999999.0
type: LocalParameter

785498
stoichiometry: 1.0
species: 300414
type: SpeciesReference

307106
value: 0.0
type: LocalParameter

308729
value: 0.0
type: LocalParameter

764967
stoichiometry: 1.0
species: 301042
type: SpeciesReference

310348
units: 756622
value: 0.0
type: LocalParameter

309472
value: 0.0
type: LocalParameter

811222
stoichiometry: 1.0
species: 301282
type: SpeciesReference

806990
stoichiometry: 2.0
species: 301392
type: SpeciesReference

795045
stoichiometry: 1.0
species: 301372
type: SpeciesReference

802672
stoichiometry: 1.0
species: 300903
type: SpeciesReference

310049
value: 0.0
type: LocalParameter

786988
stoichiometry: 1.0
species: 301322
type: SpeciesReference

794588
stoichiometry: 1.0
species: 301390
type: SpeciesReference

803129
stoichiometry: 1.0
species: 300562
type: SpeciesReference

782721
stoichiometry: 1.0
species: 300146
type: SpeciesReference

309131
value: 0.0
type: LocalParameter

303365
kinetic law: 790899
notes: Abbreviation: R_LPLIPAL2E180 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2agpe180[c] + M_h2o[c] --> M_g3pe[c] + M_h[c] + M_ocdca[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
reversible: false
reactant: 790850
reactant: 790838
product: 790862
product: 790874
fast: false
product: 790887
name: lysophospholipase
type: Reaction

309070
value: 0.0
type: LocalParameter

769636
stoichiometry: 1.0
species: 301617
type: SpeciesReference

307103
units: 756622
value: 0.0
type: LocalParameter

302585
kinetic law: 773212
product: 773200
reactant: 773188
notes: Abbreviation: R_EX_lac_D_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_lac_D <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_lac_D_e_
type: Reaction

795516
stoichiometry: 1.0
species: 300911
type: SpeciesReference

790766
stoichiometry: 1.0
species: 300038
type: SpeciesReference

804226
stoichiometry: 1.0
species: 300430
type: SpeciesReference

771668
stoichiometry: 1.0
species: 301805
type: SpeciesReference

310345
units: 756574
value: 999999.0
type: LocalParameter

801199
stoichiometry: 1.0
species: 300911
type: SpeciesReference

802562
stoichiometry: 1.0
species: 300801
type: SpeciesReference

300120
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 3_Dehydrosphinganine_C18H38NO2
type: Species

309132
units: 756622
value: 0.0
type: LocalParameter

307104
units: 756574
value: 0.0
type: LocalParameter

813641
stoichiometry: 1.0
species: 301491
type: SpeciesReference

779899
stoichiometry: 1.0
species: 301134
type: SpeciesReference

301092
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: mannosyl-glucosaminyl-acylphosphatidylinositiol
type: Species

308880
units: 756574
value: 0.0
type: LocalParameter

776034
stoichiometry: 1.0
species: 301208
type: SpeciesReference

302734
fast: false
product: 775153
type: Reaction
reactant: 775043
product: 775093
notes: Abbreviation: R_lipid1 EC Number: SUBSYSTEM: Lipids Equation: M_Rtotal[c] <==> M_dca[c] + M_ddca[c] + M_ttdca[c] + M_ttdcea[c] + M_hdca[c] + M_hdcea[c] + M_ocdca[c] + M_ocdcea[c] + M_hxa[c] + M_octa[c] genes: proteins: GENE ASSOCIATION:
kinetic law: 775177
name: R_lipid1
product: 775068
product: 775117
product: 775055
product: 775081
product: 775129
product: 775165
product: 775105
product: 775141
reversible: true

309473
units: 756622
value: 0.0
type: LocalParameter

302043
fast: false
reversible: true
product: 758969
kinetic law: 758993
reactant: 758945
reactant: 758957
product: 758981
type: Reaction
name: branched-chain-amino-acid_transaminase
notes: Abbreviation: R_ILETA EC Number: 2.6.1.42 SUBSYSTEM: AminoAcids_LeuIleValMetabolism Equation: M_akg[c] + M_ile_L[c] <==> M_3mop[c] + M_glu_L[c] genes: LOCUS:PF14_0557# proteins: GENE ASSOCIATION: (PF14_0557)

301631
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

761552
stoichiometry: 1.0
species: 300544
type: SpeciesReference

787289
stoichiometry: 1.0
species: 301533
type: SpeciesReference

307604
units: 756574
value: 999999.0
type: LocalParameter

309474
units: 756574
value: -999999.0
type: LocalParameter

301344
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphoenolpyruvate_C3H2O6P
type: Species

309369
units: 756622
value: 0.0
type: LocalParameter

768896
stoichiometry: 1.0
species: 300116
type: SpeciesReference

310048
units: 756574
value: 999999.0
type: LocalParameter

309138
units: 756622
value: 0.0
type: LocalParameter

310561
value: 0.0
type: LocalParameter

804943
stoichiometry: 1.0
species: 301501
type: SpeciesReference

305013
value: 0.0
type: LocalParameter

756986
stoichiometry: 2.0
species: 300911
type: SpeciesReference

307605
value: 0.0
type: LocalParameter

301238
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

783123
stoichiometry: 1.0
species: 300520
type: SpeciesReference

814804
stoichiometry: 1.0
species: 300911
type: SpeciesReference

307780
units: 756622
value: 0.0
type: LocalParameter

302588
kinetic law: 773249
product: 773236
reactant: 773224
notes: Abbreviation: R_EX_lac_L_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_lac_L <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_lac_L_e_
type: Reaction

303965
notes: Abbreviation: R_CBPS EC Number: 6.3.5.5 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; AminoAcids_GluMetabolism Equation: (2.0) M_atp[c] + M_gln_L[c] + M_h2o[c] + M_hco3[c] --> (2.0) M_adp[c] + M[c] bp[c] + M_glu_L[c] + (2.0) M_h[c] + M_pi[c] genes: LOCUS:PF13_0044# proteins: GENE ASSOCIATION: (PF13_0044)
kinetic law: 804275
product: 804251
reactant: 804202
product: 804226
name: Carbamoyl-phosphate_synthase_(glutamine-hydrolysing)
reactant: 804190
reversible: false
reactant: 804166
product: 804214
type: Reaction
reactant: 804178
product: 804263
fast: false
product: 804238

302049
product: 759198
product: 759186
product: 759210
reversible: false
reactant: 759150
reactant: 759162
reactant: 759174
type: Reaction
kinetic law: 759222
fast: false
notes: Abbreviation: R_LEUTRS EC Number: 6.1.1.4 SUBSYSTEM: AminoAcids_LeuIleValMetabolism Equation: M_atp[c] + M_leu_L[c] + M_trnaleu[c] --> M_amp[c] + M_leutrna[c] + M_ppi[c] genes: LOCUS:PF08_0011# LOCUS:PFF1095w# proteins: GENE ASSOCIATION: (PF08_0011) or (PFF1095w)
name: Leucine-tRNA_ligase

301094
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1D-myo-Inositol 1,3,4,5,6-pentakisphosphate_C6H7O21P5
type: Species

788547
stoichiometry: 1.0
species: 300911
type: SpeciesReference

774982
stoichiometry: 4.0
species: 300911
type: SpeciesReference

795250
stoichiometry: 1.0
species: 301142
type: SpeciesReference

309135
units: 756574
value: 999999.0
type: LocalParameter

760175
stoichiometry: 1.0
species: 301390
type: SpeciesReference

310045
units: 756622
value: 0.0
type: LocalParameter

810714
stoichiometry: 1.0
species: 301687
type: SpeciesReference

781791
stoichiometry: 1.0
species: 300300
type: SpeciesReference

305559
value: 0.0
type: LocalParameter

786404
stoichiometry: 1.0
species: 301416
type: SpeciesReference

310349
units: 756574
value: -999999.0
type: LocalParameter

301342
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: Phosphoenolpyruvate_C3H2O6P
type: Species

775516
stoichiometry: 1.0
species: 299958
type: SpeciesReference

305010
units: 756574
value: 999999.0
type: LocalParameter

309476
units: 756574
value: 999999.0
type: LocalParameter

778811
stoichiometry: 1.0
species: 300590
type: SpeciesReference

304742
kinetic law: 816667
product: 816655
reactant: 816643
notes: Abbreviation: R_4AHMMPtr EC Number: SUBSYSTEM: Transport Equation: M_4ahmmp[e] <==> M_4ahmmp[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_4AHMMPtr
type: Reaction

306110
units: 756574
value: 0.0
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766656
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species: 301088
type: SpeciesReference

307901
units: 756622
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771232
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species: 301781
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309136
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310046
units: 756574
value: -999999.0
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792506
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species: 300903
type: SpeciesReference

307608
units: 756574
value: 0.0
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801296
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species: 301432
type: SpeciesReference

759210
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species: 301416
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309477
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778195
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species: 300909
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777554
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307108
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301236
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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type: Species

307607
units: 756622
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303362
product: 790802
reactant: 790766
reactant: 790778
fast: false
product: 790814
notes: Abbreviation: R_LPLIPAL2E161 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2agpe161[c] + M_h2o[c] --> M_g3pe[c] + M_h[c] + M_hdcea[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
product: 790790
name: lysophospholipase
kinetic law: 790826
type: Reaction
reversible: false

806129
stoichiometry: 1.0
species: 300911
type: SpeciesReference

301096
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1D-myo-Inositol 1,3,4,5-tetrakisphosphate_C6H8O18P4
type: Species

302047
reactant: 759090
kinetic law: 759138
notes: Abbreviation: R_LEUTA EC Number: 2.6.1.42 SUBSYSTEM: AminoAcids_LeuIleValMetabolism Equation: M_akg[c] + M_leu_L[c] <==> M_4mop[c] + M_glu_L[c] genes: LOCUS:PF14_0557# proteins: GENE ASSOCIATION: (PF14_0557)
product: 759126
name: branched-chain-amino-acid_transaminase
fast: false
reactant: 759102
reversible: true
type: Reaction
product: 759114

307902
units: 756574
value: 0.0
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796395
stoichiometry: 1.0
species: 301559
type: SpeciesReference

306688
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value: -999999.0
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762661
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species: 300707
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300394
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: L_Arginine_C6H15N4O2
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796528
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species: 301224
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310353
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762396
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species: 300911
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787036
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species: 300514
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793025
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species: 301358
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303809
reactant: 800679
fast: false
reactant: 800691
product: 800703
reversible: false
product: 800715
notes: Abbreviation: R_NTD8 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_dgmp[c] + M_h2o[c] --> M_dgsn[c] + M_pi[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
type: Reaction
name: 5'-nucleotidase
kinetic law: 800727

302007
kinetic law: 757458
product: 757446
reactant: 757410
notes: Abbreviation: R_ASNTRS EC Number: 6.1.1.22 SUBSYSTEM: AminoAcids_AsnAspMetabolism Equation: M_asn_L[c] + M_atp[c] + M_trnaasn[c] --> M_amp[c] + M_asntrna[c] + M_ppi[c] genes: LOCUS:PFB0525w# LOCUS:PFE0475w# LOCUS:PFE0715w# proteins: GENE ASSOCIATION: (PFB0525w) or (PFE0475w) or (PFE0715w)
type: Reaction
product: 757434
name: Asparagine-tRNA_ligase
reactant: 757386
fast: false
product: 757422
reactant: 757398
reversible: false

307471
units: 756622
value: 0.0
type: LocalParameter

307752
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308400
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type: LocalParameter

300703
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Ethanolamine_C2H8NO
type: Species

309578
units: 756622
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805465
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species: 300803
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796710
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species: 300775
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807974
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species: 301176
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307647
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757957
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species: 300819
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777348
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species: 300909
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306129
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770169
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species: 300334
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305599
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803817
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species: 300911
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797625
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species: 301390
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310352
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763457
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species: 301493
type: SpeciesReference

300662
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: periplasmic_protein_disulfide_isomerase_I_oxidized_X
type: Species

306966
units: 756622
value: 0.0
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301601
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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type: Species

305866
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310251
units: 756574
value: 999999.0
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307470
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type: LocalParameter

765485
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species: 300300
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308401
units: 756622
value: 0.0
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309151
units: 756574
value: 999999.0
type: LocalParameter

772211
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species: 301836
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310579
units: 756622
value: 0.0
type: LocalParameter

810509
stoichiometry: 1.0
species: 301621
type: SpeciesReference

303131
fast: false
reactant: 785206
product: 785230
kinetic law: 785255
type: Reaction
reactant: 785218
notes: Abbreviation: R_2_1_1_103 EC Number: 2.1.1.103 SUBSYSTEM: AminoAcids_MetPolyamineMetabolism ; Lipids_PhosphatidylcholineMetabolism Equation: M[e] thamp[c] + (3) M_ametam[c] <==> M[c] holp[c] + (3) M_ahcys[c] genes: proteins: GENE ASSOCIATION:
name: phosphoethanolamine_N-methyltransferase
product: 785243
reversible: true

307646
units: 756574
value: 0.0
type: LocalParameter

777881
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species: 301062
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774535
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species: 301689
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305710
units: 756574
value: 0.0
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803745
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species: 301416
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761131
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species: 301707
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306963
units: 756574
value: 999999.0
type: LocalParameter

300396
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Arginyl_tRNA_Arg_C6H14N4OR
type: Species

310254
units: 756622
value: 0.0
type: LocalParameter

804678
stoichiometry: 1.0
species: 300909
type: SpeciesReference

310141
units: 756574
value: 999999.0
type: LocalParameter

759995
stoichiometry: 1.0
species: 300336
type: SpeciesReference

305869
units: 756622
value: 0.0
type: LocalParameter

803166
stoichiometry: 1.0
species: 300638
type: SpeciesReference

309154
units: 756622
value: 0.0
type: LocalParameter

763234
stoichiometry: 1.0
species: 301128
type: SpeciesReference

309792
units: 756622
value: 0.0
type: LocalParameter

301603
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

307473
units: 756574
value: 999999.0
type: LocalParameter

307750
units: 756574
value: 999999.0
type: LocalParameter

784235
stoichiometry: 1.0
species: 300903
type: SpeciesReference

303134
kinetic law: 785328
product: 785304
reactant: 785292
fast: false
type: Reaction
notes: Abbreviation: R_CHLPCTD EC Number: 2.7.7.15 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism Equation: M[c] holp[c] + M[c] tp[c] + M_h[c] --> M[c] dpchol[c] + M_ppi[c] genes: LOCUS:MAL13P1_86# proteins: GENE ASSOCIATION: (MAL13P1_86)
reactant: 785279
name: choline-phosphate_cytidylyltransferase
reversible: false
product: 785316
reactant: 785267

303545
product: 795057
fast: false
kinetic law: 795081
type: Reaction
product: 795069
reactant: 795045
name: phosphatidylglycerophosphatase
notes: Abbreviation: R_PGPP181pp EC Number: 3.1.3.27 SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M_h2o[c] + M_pgp181[c] --> M_pg181[c] + M_pi[c] genes: proteins: GENE ASSOCIATION:
reversible: false
reactant: 795033

306127
units: 756574
value: 999999.0
type: LocalParameter

300705
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Ethanolamine_phosphate_C2H7NO4P
type: Species

307645
units: 756622
value: 0.0
type: LocalParameter

309576
value: 0.0
type: LocalParameter

801802
stoichiometry: 1.0
species: 301753
type: SpeciesReference

805354
stoichiometry: 1.0
species: 300907
type: SpeciesReference

300660
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Dephospho_CoA_C21H33N7O13P2S
type: Species

777409
stoichiometry: 1.0
species: 300184
type: SpeciesReference

310354
units: 756574
value: -999999.0
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310140
units: 756574
value: -999999.0
type: LocalParameter

306964
value: 0.0
type: LocalParameter

302009
name: Aspartate-tRNA_ligase
product: 757506
kinetic law: 757542
reactant: 757482
product: 757518
reversible: false
notes: Abbreviation: R_ASPTRS EC Number: 6.1.1.12 SUBSYSTEM: AminoAcids_AsnAspMetabolism Equation: M_asp_L[c] + M_atp[c] + M_trnaasp[c] --> M_amp[c] + M_asptrna[c] + M_ppi[c] genes: LOCUS:PFA0145c# LOCUS:PFE0715w# proteins: GENE ASSOCIATION: (PFA0145c) or (PFE0715w)
product: 757530
type: Reaction
fast: false
reactant: 757470
reactant: 757494

796107
stoichiometry: 1.0
species: 300751
type: SpeciesReference

310253
value: 0.0
type: LocalParameter

763348
stoichiometry: 1.0
species: 300911
type: SpeciesReference

309791
value: 0.0
type: LocalParameter

783281
stoichiometry: 1.0
species: 300302
type: SpeciesReference

309153
value: 0.0
type: LocalParameter

301360
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphatidylglycerophosphate_didodecanoyl_n_C120_C30H57O13P2
type: Species

307472
units: 756574
value: 0.0
type: LocalParameter

797600
stoichiometry: 1.0
species: 301268
type: SpeciesReference

303347
name: lysophospholipase
notes: Abbreviation: R_LPLIPAL2A181 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2odec11eg3p[c] + M_h2o[c] --> M_glyc3p[c] + (2.0) M_h[c] + M_ocdcea[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
product: 790427
fast: false
type: Reaction
product: 790451
product: 790439
reactant: 790403
kinetic law: 790463
reactant: 790415
reversible: false

792542
stoichiometry: 1.0
species: 300911
type: SpeciesReference

306128
value: 0.0
type: LocalParameter

309575
units: 756574
value: 999999.0
type: LocalParameter

303020
kinetic law: 782905
product: 782893
product: 782881
reactant: 782869
notes: Abbreviation: R_3HAD181_ap EC Number: 4.2.1.61 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3hcvac11eACP[ap] --> M_h2o[ap] + M_t3c11vaceACP[ap] genes: LOCUS:PF13_0128# proteins: GENE ASSOCIATION: (PF13_0128)
fast: false
reversible: false
name: 3-Hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase
type: Reaction

784090
stoichiometry: 1.0
species: 301100
type: SpeciesReference

758473
stoichiometry: 1.0
species: 301132
type: SpeciesReference

791735
stoichiometry: 1.0
species: 300022
type: SpeciesReference

300398
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Asparagine_C4H8N2O3
type: Species

305863
units: 756574
value: 999999.0
type: LocalParameter

306969
value: 0.0
type: LocalParameter

789728
stoichiometry: 1.0
species: 300933
type: SpeciesReference

308747
units: 756622
value: 0.0
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308404
units: 756574
value: 999999.0
type: LocalParameter

306125
units: 756574
value: 0.0
type: LocalParameter

762927
stoichiometry: 1.0
species: 300763
type: SpeciesReference

308852
units: 756622
value: 0.0
type: LocalParameter

302003
reactant: 757216
reversible: false
notes: Abbreviation: R_AMPTASEPG EC Number: 3.4.11.2 SUBSYSTEM: AminoAcids_ArgProMetabolism Equation: M_h2o[c] + M_progly[c] --> M_gly[c] + M_pro_L[c] genes: LOCUS:MAL13P1_56# proteins: GENE ASSOCIATION: (MAL13P1_56)
reactant: 757204
name: membrane_alanyl_aminopeptidase
fast: false
type: Reaction
kinetic law: 757253
product: 757229
product: 757241

307475
value: 0.0
type: LocalParameter

310255
units: 756574
value: -999999.0
type: LocalParameter

785158
stoichiometry: 1.0
species: 300909
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799365
stoichiometry: 1.0
species: 300911
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310574
units: 756574
value: -999999.0
type: LocalParameter

306818
units: 756622
value: 0.0
type: LocalParameter

308748
units: 756574
value: 0.0
type: LocalParameter

308405
value: 0.0
type: LocalParameter

812924
stoichiometry: 1.0
species: 300552
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781250
stoichiometry: 1.0
species: 300520
type: SpeciesReference

785895
stoichiometry: 1.0
species: 301284
type: SpeciesReference

308853
units: 756574
value: 0.0
type: LocalParameter

788776
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species: 300939
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759850
stoichiometry: 1.0
species: 301130
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771849
stoichiometry: 1.0
species: 301816
type: SpeciesReference

310258
value: 0.0
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306967
units: 756574
value: 0.0
type: LocalParameter

306814
units: 756574
value: -999999.0
type: LocalParameter

301791
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Aspartate_C4H6NO4
type: Species

310577
value: 0.0
type: LocalParameter

307649
value: 0.0
type: LocalParameter

809667
stoichiometry: 1.0
species: 300913
type: SpeciesReference

300701
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Ethanolamine_C2H8NO
type: Species

806951
stoichiometry: 2.0
species: 301390
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816691
stoichiometry: 1.0
species: 300694
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794407
stoichiometry: 1.0
species: 301390
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307477
units: 756574
value: -999999.0
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309150
units: 756574
value: -999999.0
type: LocalParameter

308850
value: 0.0
type: LocalParameter

308402
units: 756574
value: 0.0
type: LocalParameter

767643
stoichiometry: 1.0
species: 301186
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306123
value: 0.0
type: LocalParameter

769405
stoichiometry: 1.0
species: 301617
type: SpeciesReference

302005
product: 757325
notes: Abbreviation: R_ASNS1 EC Number: 6.3.5.4 SUBSYSTEM: AminoAcids_AsnAspMetabolism Equation: M_asp_L[c] + M_atp[c] + M_gln_L[c] + M_h2o[c] --> M_amp[c] + M_asn_L[c] + M_glu_L[c] + M_h[c] + M_ppi[c] genes: LOCUS:PFC0395w# proteins: GENE ASSOCIATION: (PFC0395w)
product: 757349
product: 757361
reactant: 757301
reactant: 757265
type: Reaction
product: 757337
product: 757313
kinetic law: 757374
reactant: 757277
name: Asparagine_synthase_(glutamine-hydrolysing)
reactant: 757289
fast: false
reversible: false

791152
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species: 300777
type: SpeciesReference

809305
stoichiometry: 1.0
species: 300913
type: SpeciesReference

806261
stoichiometry: 1.0
species: 301503
type: SpeciesReference

310257
units: 756574
value: 999999.0
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768691
stoichiometry: 1.0
species: 300819
type: SpeciesReference

306968
units: 756574
value: 999999.0
type: LocalParameter

310576
units: 756574
value: 999999.0
type: LocalParameter

808132
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species: 301230
type: SpeciesReference

310350
units: 756574
value: 999999.0
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306815
units: 756574
value: 999999.0
type: LocalParameter

768328
stoichiometry: 1.0
species: 301424
type: SpeciesReference

795650
stoichiometry: 1.0
species: 300911
type: SpeciesReference

306816
value: 0.0
type: LocalParameter

308746
value: 0.0
type: LocalParameter

309579
units: 756574
value: 0.0
type: LocalParameter

307476
units: 756622
value: 0.0
type: LocalParameter

812186
stoichiometry: 1.0
species: 300616
type: SpeciesReference

303542
name: phosphatidylglycerophosphatase
fast: false
reactant: 794985
reactant: 794973
type: Reaction
notes: Abbreviation: R_PGPP181 EC Number: 3.1.3.27 SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M_h2o[c] + M_pgp181[c] --> M_pg181[c] + M_pi[c] genes: proteins: GENE ASSOCIATION:
reversible: false
product: 795009
product: 794997
kinetic law: 795021

781984
stoichiometry: 1.0
species: 301122
type: SpeciesReference

306124
units: 756622
value: 0.0
type: LocalParameter

303137
product: 785389
product: 785377
type: Reaction
reactant: 785340
fast: false
reactant: 785352
name: choline_kinase
product: 785364
kinetic law: 785401
notes: Abbreviation: R_CHOLK EC Number: 2.7.1.32 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism Equation: M_atp[c] + M[c] hol[c] --> M_adp[c] + M[c] holp[c] + M_h[c] genes: LOCUS:PF14_0020# proteins: GENE ASSOCIATION: (PF14_0020)
reversible: false

309798
units: 756622
value: 0.0
type: LocalParameter

307241
units: 756574
value: 0.0
type: LocalParameter

301609
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Tetrahydrofolyl_Glu_2_C24H27N8O9
type: Species

306234
units: 756622
value: 0.0
type: LocalParameter

303800
type: Reaction
product: 800535
notes: Abbreviation: R_NTD6pp EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_damp[c] + M_h2o[c] --> M_dad_2[c] + M_pi[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
product: 800522
name: 5'-nucleotidase
reactant: 800498
fast: false
reversible: false
kinetic law: 800547
reactant: 800510

308743
units: 756574
value: 0.0
type: LocalParameter

307366
units: 756622
value: 0.0
type: LocalParameter

308408
units: 756574
value: 0.0
type: LocalParameter

762517
stoichiometry: 1.0
species: 300813
type: SpeciesReference

308856
value: 0.0
type: LocalParameter

813568
stoichiometry: 1.0
species: 300911
type: SpeciesReference

300945
constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 299929
type: Species

775093
stoichiometry: 1.0
species: 301703
type: SpeciesReference

790427
stoichiometry: 1.0
species: 300851
type: SpeciesReference

306812
value: 0.0
type: LocalParameter

789389
stoichiometry: 1.0
species: 299982
type: SpeciesReference

300550
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Deoxyadenosine_C10H13N5O3
type: Species

310147
units: 756574
value: 999999.0
type: LocalParameter

758364
stoichiometry: 1.0
species: 300414
type: SpeciesReference

305592
units: 756622
value: 0.0
type: LocalParameter

301793
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Choline_C5H14NO
type: Species

761432
stoichiometry: 1.0
species: 300414
type: SpeciesReference

306235
units: 756574
value: 0.0
type: LocalParameter

302159
kinetic law: 763061
product: 763049
reactant: 763037
notes: Abbreviation: R_TPI EC Number: 5.3.1.1 SUBSYSTEM: Carbohydrates_Glycolysis ; Lipids_IsoprenoidsMetabolism Equation: M_dhap[c] <==> M_g3p[c] genes: LOCUS:PF14_0378# proteins: GENE ASSOCIATION: (PF14_0378)
fast: false
reversible: true
name: Triose-phosphate_isomerase
type: Reaction

307240
units: 756622
value: 0.0
type: LocalParameter

303026
kinetic law: 783001
product: 782989
product: 782977
reactant: 782965
notes: Abbreviation: R_3HAD60_ap EC Number: 4.2.1.58 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3hhexACP[ap] --> M_h2o[ap] + M_thex2eACP[ap] genes: LOCUS:PF13_0128# proteins: GENE ASSOCIATION: (PF13_0128)
fast: false
reversible: false
name: Crotonoyl-[acyl-carrier-protein]_hydratase
type: Reaction

306500
units: 756574
value: -999999.0
type: LocalParameter

781141
stoichiometry: 1.0
species: 300592
type: SpeciesReference

308857
units: 756622
value: 0.0
type: LocalParameter

307759
units: 756574
value: 0.0
type: LocalParameter

308409
units: 756574
value: 999999.0
type: LocalParameter

308744
units: 756574
value: 999999.0
type: LocalParameter

806841
stoichiometry: 1.0
species: 301028
type: SpeciesReference

771692
stoichiometry: 1.0
species: 300558
type: SpeciesReference

782032
stoichiometry: 1.0
species: 300849
type: SpeciesReference

809511
stoichiometry: 1.0
species: 300911
type: SpeciesReference

302870
reactant: 778979
product: 779016
type: Reaction
notes: Abbreviation: R_AGPAT160_ap EC Number: 2.3.1.51 SUBSYSTEM: Lipids_FattyAcidSynthesis ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_1hdecg3p[ap] + M_palmACP[ap] --> M_ACP[ap] + M_pa160[ap] genes: LOCUS:PF14_0421# proteins: GENE ASSOCIATION: (PF14_0421)
name: 1-acylglycerol-3-phosphate_O-acyltransferase
reversible: false
fast: false
kinetic law: 779029
reactant: 778991
product: 779004

303824
reactant: 800981
notes: Abbreviation: R_PDE2 EC Number: 3.1.4.17 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_35cdamp[c] + M_h2o[c] --> M_damp[c] + M_h[c] genes: LOCUS:MAL13P1_118# LOCUS:MAL13P1_119# LOCUS:PF14_0672# LOCUS:PFL0475w# proteins: GENE ASSOCIATION: (MAL13P1_118) or (MAL13P1_119) or (PF14_0672) or (PFL0475w)
type: Reaction
name: 3',5'-cyclic-nucleotide_phosphodiesterase
fast: false
product: 801017
reactant: 800993
product: 801005
reversible: false
kinetic law: 801029

305446
units: 756574
value: 999999.0
type: LocalParameter

306813
units: 756622
value: 0.0
type: LocalParameter

802648
stoichiometry: 1.0
species: 301641
type: SpeciesReference

300288
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Acetoacetyl_CoA_C25H36N7O18P3S
type: Species

782624
stoichiometry: 1.0
species: 300140
type: SpeciesReference

309034
units: 756574
value: 0.0
type: LocalParameter

307368
units: 756574
value: 999999.0
type: LocalParameter

303029
kinetic law: 783050
product: 783038
product: 783026
reactant: 783013
notes: Abbreviation: R_3HAD80_ap EC Number: 4.2.1.58 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3hoctACP[ap] --> M_h2o[ap] + M_toct2eACP[ap] genes: LOCUS:PF13_0128# proteins: GENE ASSOCIATION: (PF13_0128)
fast: false
reversible: false
name: Crotonoyl-[acyl-carrier-protein]_hydratase
type: Reaction

306232
units: 756574
value: 999999.0
type: LocalParameter

307243
value: 0.0
type: LocalParameter

810617
stoichiometry: 1.0
species: 300913
type: SpeciesReference

302873
kinetic law: 779090
name: 1-acylglycerol-3-phosphate_O-acyltransferase
product: 779066
reactant: 779053
notes: Abbreviation: R_AGPAT161_ap EC Number: 2.3.1.51 SUBSYSTEM: Lipids_FattyAcidSynthesis ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_1hdec9eg3p[ap] + M_hdeACP[ap] --> M_ACP[ap] + M_pa161[ap] genes: LOCUS:PF14_0421# proteins: GENE ASSOCIATION: (PF14_0421)
product: 779078
reactant: 779041
type: Reaction
fast: false
reversible: false

305719
units: 756622
value: 0.0
type: LocalParameter

308854
units: 756574
value: 999999.0
type: LocalParameter

300947
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
type: Species

307758
units: 756622
value: 0.0
type: LocalParameter

305449
value: 0.0
type: LocalParameter

808288
stoichiometry: 1.0
species: 300911
type: SpeciesReference

310460
units: 756574
value: 999999.0
type: LocalParameter

306810
units: 756574
value: 999999.0
type: LocalParameter

304929
units: 756574
value: -999999.0
type: LocalParameter

301795
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: holesterol_C27H46O
type: Species

309037
value: 0.0
type: LocalParameter

802201
stoichiometry: 1.0
species: 300332
type: SpeciesReference

799257
stoichiometry: 1.0
species: 301006
type: SpeciesReference

773711
stoichiometry: 1.0
species: 301918
type: SpeciesReference

778508
stoichiometry: 1.0
species: 300512
type: SpeciesReference

812077
stoichiometry: 1.0
species: 300522
type: SpeciesReference

308742
units: 756622
value: 0.0
type: LocalParameter

306502
units: 756574
value: 999999.0
type: LocalParameter

307367
units: 756574
value: -999999.0
type: LocalParameter

779053
stoichiometry: 1.0
species: 300949
type: SpeciesReference

307242
units: 756574
value: 999999.0
type: LocalParameter

306233
value: 0.0
type: LocalParameter

309799
units: 756574
value: -999999.0
type: LocalParameter

767751
stoichiometry: 2.0
species: 300901
type: SpeciesReference

307757
value: 0.0
type: LocalParameter

308407
units: 756622
value: 0.0
type: LocalParameter

780619
stoichiometry: 1.0
species: 300520
type: SpeciesReference

309036
units: 756574
value: 999999.0
type: LocalParameter

789946
stoichiometry: 1.0
species: 301220
type: SpeciesReference

809414
stoichiometry: 1.0
species: 300538
type: SpeciesReference

781479
stoichiometry: 1.0
species: 300512
type: SpeciesReference

304928
units: 756622
value: 0.0
type: LocalParameter

310148
value: 0.0
type: LocalParameter

305593
units: 756574
value: 0.0
type: LocalParameter

303023
kinetic law: 782953
product: 782941
product: 782929
reactant: 782917
notes: Abbreviation: R_3HAD40_ap EC Number: 4.2.1.58 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3haACP[ap] --> M_but2eACP[ap] + M_h2o[ap] genes: LOCUS:PF13_0128# proteins: GENE ASSOCIATION: (PF13_0128)
fast: false
reversible: false
name: Crotonoyl-[acyl-carrier-protein]_hydratase
type: Reaction

306238
value: 0.0
type: LocalParameter

307643
value: 0.0
type: LocalParameter

307362
units: 756574
value: 0.0
type: LocalParameter

301605
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 5_6_7_8_Tetrahydrofolate_C19H21N7O6
type: Species

307245
units: 756622
value: 0.0
type: LocalParameter

765135
stoichiometry: 1.0
species: 300414
type: SpeciesReference

799509
stoichiometry: 1.0
species: 301390
type: SpeciesReference

309261
units: 756574
value: 999999.0
type: LocalParameter

309039
units: 756622
value: 0.0
type: LocalParameter

305596
units: 756574
value: 999999.0
type: LocalParameter

310143
value: 0.0
type: LocalParameter

304718
kinetic law: 816376
product: 816364
reactant: 816352
notes: Abbreviation: R_PPPG9tmt EC Number: SUBSYSTEM: Transport_MT Equation: M_pppg9[m] <==> M_pppg9[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PPPG9tmt
type: Reaction

813217
stoichiometry: 1.0
species: 300986
type: SpeciesReference

301797
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Citrate_C6H5O7
type: Species

305443
units: 756574
value: -999999.0
type: LocalParameter

794817
stoichiometry: 1.0
species: 301354
type: SpeciesReference

303827
reversible: false
type: Reaction
product: 801078
notes: Abbreviation: R_PDE3 EC Number: 3.1.4.17 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_35cimp[c] + M_h2o[c] --> M_h[c] + M_imp[c] genes: LOCUS:MAL13P1_118# LOCUS:MAL13P1_119# LOCUS:PF14_0672# LOCUS:PFL0475w# proteins: GENE ASSOCIATION: (MAL13P1_118) or (MAL13P1_119) or (PF14_0672) or (PFL0475w)
name: 3',5'-cyclic-nucleotide_phosphodiesterase
reactant: 801041
kinetic law: 801090
fast: false
product: 801066
reactant: 801054

300554
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: dADP_C10H12N5O9P2
type: Species

310462
value: 0.0
type: LocalParameter

813362
stoichiometry: 1.0
species: 301731
type: SpeciesReference

762287
stoichiometry: 1.0
species: 300713
type: SpeciesReference

763565
stoichiometry: 1.0
species: 300805
type: SpeciesReference

309360
units: 756574
value: 999999.0
type: LocalParameter

300811
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Geranylgeranyl diphosphate
type: Species

765063
stoichiometry: 1.0
species: 300903
type: SpeciesReference

778714
stoichiometry: 1.0
species: 300412
type: SpeciesReference

768015
stoichiometry: 4.0
species: 301410
type: SpeciesReference

307755
units: 756574
value: 999999.0
type: LocalParameter

306239
units: 756622
value: 0.0
type: LocalParameter

781020
stoichiometry: 1.0
species: 300566
type: SpeciesReference

796820
stoichiometry: 1.0
species: 300382
type: SpeciesReference

305716
value: 0.0
type: LocalParameter

797341
stoichiometry: 1.0
species: 300054
type: SpeciesReference

309573
units: 756574
value: 0.0
type: LocalParameter

307361
units: 756622
value: 0.0
type: LocalParameter

307642
units: 756574
value: 999999.0
type: LocalParameter

303548
notes: Abbreviation: R_2_7_8_3 EC Number: 2.7.8.3 SUBSYSTEM: Lipids_SphingomyelinCeramideMetabolism Equation: M[c] dpchol[c] + M[c] rm[c] + M_h[c] --> M[c] mp[c] + M_sphmyln[c] genes: LOCUS:PFF1210w# proteins: GENE ASSOCIATION: (PFF1210w)
reactant: 795105
reactant: 795117
name: ceramide_cholinephosphotransferase
reactant: 795093
product: 795129
type: Reaction
fast: false
reversible: false
kinetic law: 795153
product: 795141

309793
units: 756574
value: -999999.0
type: LocalParameter

308740
value: 0.0
type: LocalParameter

309260
units: 756574
value: 0.0
type: LocalParameter

303236
product: 787688
fast: false
name: CDP-diacylglycerol-inositol_3-phosphatidyltransferase
type: Reaction
reactant: 787652
product: 787676
kinetic law: 787700
product: 787664
reversible: false
notes: Abbreviation: R_PINOS EC Number: 2.7.8.11 SUBSYSTEM: Lipids_InositolPhosphateMetabolism Equation: (0.01) M[c] dpdag[c] + M_inost[c] --> M[c] mp[c] + M_h[c] + (0.01) M_ptd1ino[c] genes: LOCUS:MAL13P1_82# proteins: GENE ASSOCIATION: (MAL13P1_82)
reactant: 787640

764508
stoichiometry: 1.0
species: 300414
type: SpeciesReference

774693
stoichiometry: 1.0
species: 301972
type: SpeciesReference

305442
units: 756622
value: 0.0
type: LocalParameter

303806
type: Reaction
reactant: 800631
kinetic law: 800667
notes: Abbreviation: R_NTD7pp EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_amp[c] + M_h2o[c] --> M_adn[c] + M_pi[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
product: 800655
reactant: 800619
product: 800643
name: 5'-nucleotidase
fast: false
reversible: false

300284
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: LipidCoa
type: Species

775624
stoichiometry: 1.0
species: 300460
type: SpeciesReference

757663
stoichiometry: 1.0
species: 300911
type: SpeciesReference

798449
stoichiometry: 1.0
species: 301160
type: SpeciesReference

308858
units: 756574
value: 0.0
type: LocalParameter

300943
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

309572
units: 756622
value: 0.0
type: LocalParameter

307754
units: 756574
value: 0.0
type: LocalParameter

306690
units: 756574
value: 999999.0
type: LocalParameter

794128
stoichiometry: 1.0
species: 300510
type: SpeciesReference

791394
stoichiometry: 1.0
species: 301214
type: SpeciesReference

309263
value: 0.0
type: LocalParameter

307247
units: 756574
value: 999999.0
type: LocalParameter

307364
value: 0.0
type: LocalParameter

301607
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: 5_6_7_8_Tetrahydrofolate_C19H21N7O6
type: Species

303239
kinetic law: 787773
fast: false
name: glycerophosphodiester_phosphodiesterase
type: Reaction
product: 787748
reversible: false
notes: Abbreviation: R_GPDDA1 EC Number: 3.1.4.46 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_g3pc[c] + M_h2o[c] --> M[c] hol[c] + M_glyc3p[c] + M_h[c] genes: LOCUS:PF14_0060# proteins: GENE ASSOCIATION: (PF14_0060)
reactant: 787712
product: 787761
reactant: 787724
product: 787736

309796
value: 0.0
type: LocalParameter

301799
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: CO2_CO2
type: Species

304925
value: 0.0
type: LocalParameter

793176
stoichiometry: 1.0
species: 300903
type: SpeciesReference

782831
stoichiometry: 1.0
species: 300901
type: SpeciesReference

303803
type: Reaction
reactant: 800571
notes: Abbreviation: R_NTD7 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_amp[c] + M_h2o[c] --> M_adn[c] + M_pi[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
reversible: false
product: 800583
kinetic law: 800607
reactant: 800559
product: 800595
fast: false
name: 5'-nucleotidase

310145
units: 756574
value: -999999.0
type: LocalParameter

300552
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Deoxyadenosine_C10H13N5O3
type: Species

777990
stoichiometry: 1.0
species: 300270
type: SpeciesReference

772199
stoichiometry: 1.0
species: 300755
type: SpeciesReference

310464
units: 756574
value: -999999.0
type: LocalParameter

310250
units: 756574
value: 0.0
type: LocalParameter

306237
units: 756574
value: 999999.0
type: LocalParameter

302876
kinetic law: 779152
reversible: false
product: 779128
product: 779140
reactant: 779103
notes: Abbreviation: R_AGPAT180_ap EC Number: 2.3.1.51 SUBSYSTEM: Lipids_FattyAcidSynthesis ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_1odecg3p[ap] + M_ocdcaACP[ap] --> M_ACP[ap] + M_pa180[ap] genes: LOCUS:PF14_0421# proteins: GENE ASSOCIATION: (PF14_0421)
reactant: 779116
fast: false
name: 1-acylglycerol-3-phosphate_O-acyltransferase
type: Reaction

306691
value: 0.0
type: LocalParameter

300813
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: D_Glucose_C6H12O6
type: Species

307246
units: 756574
value: 0.0
type: LocalParameter

309795
units: 756574
value: 999999.0
type: LocalParameter

764183
stoichiometry: 1.0
species: 300414
type: SpeciesReference

307363
units: 756574
value: 999999.0
type: LocalParameter

792651
stoichiometry: 1.0
species: 300903
type: SpeciesReference

307753
units: 756622
value: 0.0
type: LocalParameter

307640
units: 756574
value: 0.0
type: LocalParameter

794709
stoichiometry: 1.0
species: 301390
type: SpeciesReference

798013
stoichiometry: 1.0
species: 300903
type: SpeciesReference

310144
units: 756622
value: 0.0
type: LocalParameter

300286
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: LipidCoa
type: Species

786101
stoichiometry: 1.0
species: 300468
type: SpeciesReference

803274
stoichiometry: 1.0
species: 300829
type: SpeciesReference

310463
units: 756622
value: 0.0
type: LocalParameter

781563
stoichiometry: 3.0
species: 301070
type: SpeciesReference

768994
stoichiometry: 1.0
species: 301541
type: SpeciesReference

309571
value: 0.0
type: LocalParameter

791940
stoichiometry: 1.0
species: 301284
type: SpeciesReference

300941
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Hexadecenoate_n_C161_C16H29O2
type: Species

814732
stoichiometry: 1.0
species: 300332
type: SpeciesReference

796928
stoichiometry: 1.0
species: 301356
type: SpeciesReference

305713
units: 756574
value: 999999.0
type: LocalParameter

302879
reactant: 779164
type: Reaction
fast: false
reversible: false
notes: Abbreviation: R_AGPAT181_ap EC Number: 2.3.1.51 SUBSYSTEM: Lipids_FattyAcidSynthesis ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_1odec11eg3p[ap] + M_octeACP[ap] --> M_ACP[ap] + M_pa181[ap] genes: LOCUS:PF14_0421# proteins: GENE ASSOCIATION: (PF14_0421)
product: 779200
kinetic law: 779212
name: 1-acylglycerol-3-phosphate_O-acyltransferase
product: 779188
reactant: 779176

309351
value: 0.0
type: LocalParameter

779380
stoichiometry: 1.0
species: 301134
type: SpeciesReference

771548
stoichiometry: 1.0
species: 300516
type: SpeciesReference

300292
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Acetate_C2H3O2
type: Species

764822
stoichiometry: 1.0
species: 300879
type: SpeciesReference

804106
stoichiometry: 1.0
species: 300430
type: SpeciesReference

304715
kinetic law: 816339
product: 816327
reactant: 816315
notes: Abbreviation: R_PPP9tmt EC Number: SUBSYSTEM: Transport_MT Equation: M_ppp9[m] <==> M_ppp9[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PPP9tmt
type: Reaction

309252
value: 0.0
type: LocalParameter

302440
kinetic law: 771352
product: 771340
reactant: 771328
notes: Abbreviation: R_EX_arg_L_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_arg_L <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_arg_L_e_
type: Reaction

795938
stoichiometry: 1.0
species: 301020
type: SpeciesReference

304921
units: 756574
value: -999999.0
type: LocalParameter

786842
stoichiometry: 1.0
species: 301448
type: SpeciesReference

305199
units: 756574
value: 0.0
type: LocalParameter

309901
value: 0.0
type: LocalParameter

308627
units: 756574
value: 0.0
type: LocalParameter

300803
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: GDP_C10H12N5O11P2
type: Species

300558
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: diacylglycerol
type: Species

306693
units: 756574
value: -999999.0
type: LocalParameter

813787
stoichiometry: 1.0
species: 301613
type: SpeciesReference

307248
value: 0.0
type: LocalParameter

302163
reactant: 763133
fast: false
notes: Abbreviation: R_G3PD1ir EC Number: 1.1.1.8 SUBSYSTEM: Lipids_FattyAcidSynthesis ; Others_MitochondrialElectronFlow ; Carbohydrates_Glycolysis ; Lipids_UtilizationPhospholipids Equation: M_dhap[c] + M_h[c] + M_nadh[c] --> M_glyc3p[c] + M_nad[c] genes: LOCUS:PFL0780w# proteins: GENE ASSOCIATION: (PFL0780w)
reversible: false
reactant: 763109
product: 763158
product: 763145
kinetic law: 763170
type: Reaction
reactant: 763121
name: glycerol-3-phosphate_dehydrogenase_(NAD+)

790645
stoichiometry: 1.0
species: 300775
type: SpeciesReference

759525
stoichiometry: 1.0
species: 300829
type: SpeciesReference

783415
stoichiometry: 1.0
species: 300574
type: SpeciesReference

310466
units: 756574
value: 999999.0
type: LocalParameter

758251
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species: 300909
type: SpeciesReference

801054
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species: 300903
type: SpeciesReference

309253
units: 756622
value: 0.0
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787664
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species: 300510
type: SpeciesReference

760465
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species: 300911
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815181
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species: 300336
type: SpeciesReference

807526
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species: 300897
type: SpeciesReference

307023
units: 756622
value: 0.0
type: LocalParameter

303245
kinetic law: 787918
notes: Abbreviation: R_GPDDA2 EC Number: 3.1.4.46 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_g3pe[c] + M_h2o[c] --> M[e] tha[c] + M_glyc3p[c] + M_h[c] genes: LOCUS:PF14_0060# proteins: GENE ASSOCIATION: (PF14_0060)
reversible: false
reactant: 787869
product: 787893
name: glycerophosphodiester_phosphodiesterase
product: 787881
reactant: 787857
type: Reaction
product: 787906
fast: false

812804
stoichiometry: 1.0
species: 300414
type: SpeciesReference

304922
units: 756574
value: 999999.0
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800401
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species: 301390
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308199
units: 756574
value: 0.0
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309902
units: 756622
value: 0.0
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309352
units: 756622
value: 0.0
type: LocalParameter

301944
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Pyruvate_C3H3O3
type: Species

308626
units: 756622
value: 0.0
type: LocalParameter

306692
units: 756622
value: 0.0
type: LocalParameter

310467
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type: LocalParameter

771957
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species: 301822
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817368
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species: 300542
type: SpeciesReference

300294
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Acetate_C2H3O2
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769854
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species: 300224
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797904
stoichiometry: 1.0
species: 301276
type: SpeciesReference

788400
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species: 300911
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759429
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species: 301132
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309254
units: 756574
value: -999999.0
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802864
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species: 300370
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760912
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species: 300829
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309040
units: 756574
value: 0.0
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790983
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species: 300044
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305008
units: 756622
value: 0.0
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307024
units: 756574
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792398
stoichiometry: 1.0
species: 300911
type: SpeciesReference

308625
value: 0.0
type: LocalParameter

790584
stoichiometry: 1.0
species: 300911
type: SpeciesReference

302165
name: glycerol-3-phosphate_dehydrogenase_(NAD+)
fast: false
kinetic law: 763247
reactant: 763196
product: 763234
reversible: false
reactant: 763208
type: Reaction
product: 763221
reactant: 763183
notes: Abbreviation: R_G3PD1ir_ap EC Number: 1.1.1.8 SUBSYSTEM: Lipids_FattyAcidSynthesis ; Others_MitochondrialElectronFlow ; Carbohydrates_Glycolysis ; Lipids_UtilizationPhospholipids Equation: M_dhap[ap] + M_h[ap] + M_nadh[ap] --> M_glyc3p[ap] + M_nad[ap] genes: LOCUS:PF11_0157# proteins: GENE ASSOCIATION: (PF11_0157)

800860
stoichiometry: 1.0
species: 300861
type: SpeciesReference

766122
stoichiometry: 1.0
species: 300340
type: SpeciesReference

300805
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
type: Species

306695
units: 756574
value: 999999.0
type: LocalParameter

802792
stoichiometry: 1.0
species: 300801
type: SpeciesReference

300556
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: diacylglycerol
type: Species

817054
stoichiometry: 20.0
species: 300841
type: SpeciesReference

761840
stoichiometry: 1.0
species: 300306
type: SpeciesReference

763121
stoichiometry: 1.0
species: 300911
type: SpeciesReference

307025
units: 756574
value: 999999.0
type: LocalParameter

305009
units: 756574
value: 0.0
type: LocalParameter

303698
reactant: 798425
reactant: 798413
fast: false
reactant: 798401
name: adenosine_deaminase
product: 798437
notes: Abbreviation: R_ADA EC Number: 3.5.4.4 SUBSYSTEM: Nucleotides_PurineMetabolism ; AminoAcids_MetPolyamineMetabolism Equation: M_adn[c] + M_h[c] + M_h2o[c] --> M_ins[c] + M_nh4[c] genes: LOCUS:PF10_0289# proteins: GENE ASSOCIATION: (PF10_0289)
kinetic law: 798461
type: Reaction
product: 798449
reversible: false

304920
units: 756622
value: 0.0
type: LocalParameter

309041
units: 756574
value: 999999.0
type: LocalParameter

301946
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Riboflavin_C17H20N4O6
type: Species

796674
stoichiometry: 1.0
species: 300032
type: SpeciesReference

793453
stoichiometry: 1.0
species: 300504
type: SpeciesReference

310469
units: 756622
value: 0.0
type: LocalParameter

802067
stoichiometry: 1.0
species: 301719
type: SpeciesReference

795371
stoichiometry: 1.0
species: 300284
type: SpeciesReference

309256
units: 756574
value: 999999.0
type: LocalParameter

757506
stoichiometry: 1.0
species: 300370
type: SpeciesReference

763784
stoichiometry: 1.0
species: 301076
type: SpeciesReference

762068
stoichiometry: 1.0
species: 300486
type: SpeciesReference

306697
units: 756622
value: 0.0
type: LocalParameter

792073
stoichiometry: 1.0
species: 300903
type: SpeciesReference

765281
stoichiometry: 1.0
species: 300408
type: SpeciesReference

771740
stoichiometry: 1.0
species: 301810
type: SpeciesReference

778388
stoichiometry: 1.0
species: 301292
type: SpeciesReference

309355
units: 756574
value: 999999.0
type: LocalParameter

810836
stoichiometry: 1.0
species: 301743
type: SpeciesReference

307369
value: 0.0
type: LocalParameter

301358
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphatidylglycerol_dioctadec_11_enoyl_n_C181_C42H78O10P1
type: Species

801910
stoichiometry: 1.0
species: 301390
type: SpeciesReference

770011
stoichiometry: 1.0
species: 300090
type: SpeciesReference

305195
value: 0.0
type: LocalParameter

302167
reactant: 763260
reactant: 763273
product: 763312
notes: Abbreviation: R_HEX7 EC Number: 2.7.1.1 SUBSYSTEM: Carbohydrates_MannoseFructoseMetabolism ; Carbohydrates_Glycolysis Equation: M_atp[c] + M_fru[c] --> M_adp[c] + M_f6p[c] + M_h[c] genes: LOCUS:PFF1155w# proteins: GENE ASSOCIATION: (PFF1155w)
product: 763286
product: 763299
name: hexokinase
type: Reaction
fast: false
reversible: false
kinetic law: 763324

307026
value: 0.0
type: LocalParameter

766777
stoichiometry: 1.0
species: 300332
type: SpeciesReference

300807
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: GDP_L_fucose_C16H23N5O15P2
type: Species

309257
value: 0.0
type: LocalParameter

760055
stoichiometry: 1.0
species: 300062
type: SpeciesReference

305439
value: 0.0
type: LocalParameter

800100
stoichiometry: 1.0
species: 300586
type: SpeciesReference

310030
units: 756574
value: -999999.0
type: LocalParameter

785056
stoichiometry: 1.0
species: 301140
type: SpeciesReference

794274
stoichiometry: 1.0
species: 301346
type: SpeciesReference

813144
stoichiometry: 1.0
species: 300871
type: SpeciesReference

309356
value: 0.0
type: LocalParameter

306696
value: 0.0
type: LocalParameter

301948
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: D_Sorbitol_C6H14O6
type: Species

300937
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: Hexadecenoate_n_C161_C16H29O2
type: Species

780386
stoichiometry: 1.0
species: 300368
type: SpeciesReference

301088
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 5_10_Methenyltetrahydrofolate_C20H20N7O6
type: Species

306230
units: 756574
value: 0.0
type: LocalParameter

309043
value: 0.0
type: LocalParameter

310031
units: 756574
value: 999999.0
type: LocalParameter

309044
units: 756622
value: 0.0
type: LocalParameter

777773
stoichiometry: 1.0
species: 300909
type: SpeciesReference

776289
stoichiometry: 1.0
species: 300903
type: SpeciesReference

785304
stoichiometry: 1.0
species: 300438
type: SpeciesReference

300290
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: Acetyl_ACP_C13H23N2O8PRS
type: Species

307749
units: 756574
value: 0.0
type: LocalParameter

303242
reactant: 787785
fast: false
reactant: 787797
name: glycerophosphodiester_phosphodiesterase
product: 787809
product: 787821
reversible: false
kinetic law: 787845
notes: Abbreviation: R_GPDDA1pp EC Number: 3.1.4.46 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_g3pc[c] + M_h2o[c] --> M[c] hol[c] + M_glyc3p[c] + M_h[c] genes: LOCUS:PF14_0060# proteins: GENE ASSOCIATION: (PF14_0060)
product: 787833
type: Reaction

309353
units: 756574
value: -999999.0
type: LocalParameter

308629
units: 756574
value: 999999.0
type: LocalParameter

303821
name: 3',5'-cyclic-nucleotide_phosphodiesterase
product: 800944
reversible: false
notes: Abbreviation: R_PDE1 EC Number: 3.1.4.17 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M[c] amp[c] + M_h2o[c] --> M_amp[c] + M_h[c] genes: LOCUS:MAL13P1_118# LOCUS:MAL13P1_119# LOCUS:PF14_0672# LOCUS:PFL0475w# proteins: GENE ASSOCIATION: (MAL13P1_118) or (MAL13P1_119) or (PF14_0672) or (PFL0475w)
reactant: 800932
type: Reaction
reactant: 800920
product: 800956
fast: false
kinetic law: 800969

307028
units: 756622
value: 0.0
type: LocalParameter

300809
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: GDP_D_mannose_C16H23N5O16P2
type: Species

304712
kinetic law: 816303
product: 816291
reactant: 816278
notes: Abbreviation: R_PPItmt EC Number: SUBSYSTEM: Transport_MT Equation: M_ppi[m] <==> M_ppi[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PPItmt
type: Reaction

302169
reversible: false
product: 763384
kinetic law: 763397
reactant: 763348
type: Reaction
fast: false
notes: Abbreviation: R_PYK EC Number: 2.7.1.40 SUBSYSTEM: Carbohydrates_Glycolysis ; Carbohydrates_PyruvateMetabolism ; Lipids_IsoprenoidsMetabolism ; Lipids_FattyAcidSynthesis Equation: M_adp[c] + M_h[c] + M_pep[c] --> M_atp[c] + M_pyr[c] genes: proteins: GENE ASSOCIATION:
product: 763372
reactant: 763336
reactant: 763360
name: pyruvate_kinase

779777
stoichiometry: 1.0
species: 301210
type: SpeciesReference

814515
stoichiometry: 1.0
species: 301390
type: SpeciesReference

768775
stoichiometry: 1.0
species: 300480
type: SpeciesReference

797192
stoichiometry: 1.0
species: 300777
type: SpeciesReference

772090
stoichiometry: 1.0
species: 300745
type: SpeciesReference

309259
units: 756622
value: 0.0
type: LocalParameter

309045
units: 756574
value: 0.0
type: LocalParameter

817743
stoichiometry: 0.1827
species: 300841
type: SpeciesReference

761288
stoichiometry: 1.0
species: 300911
type: SpeciesReference

795189
stoichiometry: 1.0
species: 301148
type: SpeciesReference

302443
kinetic law: 771389
product: 771376
reactant: 771364
notes: Abbreviation: R_EX_asn_L_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_asn_L <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_asn_L_e_
type: Reaction

767366
stoichiometry: 1.0
species: 301416
type: SpeciesReference

305198
units: 756622
value: 0.0
type: LocalParameter

813885
stoichiometry: 1.0
species: 300743
type: SpeciesReference

307029
units: 756574
value: -999999.0
type: LocalParameter

818007
stoichiometry: 2.23E-4
species: 301605
type: SpeciesReference

807902
stoichiometry: 1.0
species: 300913
type: SpeciesReference

306698
units: 756574
value: -999999.0
type: LocalParameter

809956
stoichiometry: 1.0
species: 300913
type: SpeciesReference

301086
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Methionine_C5H11NO2S
type: Species

764725
stoichiometry: 1.0
species: 300414
type: SpeciesReference

300939
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Hexadecenoate_n_C161_C16H29O2
type: Species

306122
units: 756574
value: 999999.0
type: LocalParameter

774802
stoichiometry: 1.0
species: 301978
type: SpeciesReference

304601
type: Reaction
reactant: 814864
fast: false
name: R_PIOHex_mt
reversible: false
product: 814888
reactant: 814852
notes: Abbreviation: R_PIOHex_mt EC Number: SUBSYSTEM: Transport_MT Equation: M_oh1[m] + M_pi[c] --> M_oh1[c] + M_pi[m] genes: LOCUS:PFL0110c# proteins: GENE ASSOCIATION: (PFL0110c)
product: 814876
kinetic law: 814900

302448
kinetic law: 771463
product: 771450
reactant: 771438
notes: Abbreviation: R_EX_chol_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M[c] hol <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_chol_e_
type: Reaction

301354
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphatidylglycerol_dihexadec_9_enoyl_n_C161_C38H70O10P1
type: Species

309359
units: 756574
value: -999999.0
type: LocalParameter

785461
stoichiometry: 0.01
species: 301300
type: SpeciesReference

757229
stoichiometry: 1.0
species: 300841
type: SpeciesReference

305191
units: 756574
value: 0.0
type: LocalParameter

310570
units: 756574
value: 999999.0
type: LocalParameter

775503
stoichiometry: 1.0
species: 299954
type: SpeciesReference

305870
units: 756574
value: 0.0
type: LocalParameter

792989
stoichiometry: 1.0
species: 301214
type: SpeciesReference

803962
stoichiometry: 1.0
species: 300414
type: SpeciesReference

788559
stoichiometry: 1.0
species: 301697
type: SpeciesReference

309147
value: 0.0
type: LocalParameter

759318
stoichiometry: 1.0
species: 300150
type: SpeciesReference

310033
value: 0.0
type: LocalParameter

303128
reactant: 785146
type: Reaction
fast: false
reversible: false
reactant: 785158
kinetic law: 785194
name: 2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase
notes: Abbreviation: R_MEPCT_ap EC Number: 2.7.7.60 SUBSYSTEM: Lipids_IsoprenoidsMetabolism Equation: M_2me4p[ap] + M[c] tp[ap] + M_h[ap] --> M_4c2me[ap] + M_ppi[ap] genes: LOCUS:PFA0340w# proteins: GENE ASSOCIATION: (PFA0340w)
product: 785170
reactant: 785134
product: 785182

301084
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Methionine_C5H11NO2S
type: Species

301200
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: Oxaloacetate_C4H2O5
type: Species

777566
stoichiometry: 1.0
species: 300909
type: SpeciesReference

307479
units: 756574
value: 999999.0
type: LocalParameter

768123
stoichiometry: 1.5
species: 301186
type: SpeciesReference

303350
fast: false
product: 790524
product: 790512
reactant: 790475
name: lysophospholipase
reactant: 790487
type: Reaction
product: 790500
kinetic law: 790536
notes: Abbreviation: R_LPLIPAL2E120 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2agpe120[c] + M_h2o[c] --> M_ddca[c] + M_g3pe[c] + M_h[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
reversible: false

302011
kinetic law: 757627
fast: false
name: Glutamine-tRNA_ligase
reversible: false
product: 757591
notes: Abbreviation: R_GLNTRS EC Number: 6.1.1.18 SUBSYSTEM: AminoAcids_GluMetabolism Equation: M_atp[c] + M_gln_L[c] + M_trnagln[c] --> M_amp[c] + M_glntrna[c] + M_ppi[c] genes: LOCUS:PF13_0170# proteins: GENE ASSOCIATION: (PF13_0170)
product: 757603
reactant: 757566
reactant: 757578
type: Reaction
product: 757615
reactant: 757554

305192
units: 756574
value: 999999.0
type: LocalParameter

763674
stoichiometry: 1.0
species: 300885
type: SpeciesReference

784656
stoichiometry: 1.0
species: 300330
type: SpeciesReference

769914
stoichiometry: 1.0
species: 300084
type: SpeciesReference

787181
stoichiometry: 1.0
species: 301444
type: SpeciesReference

801284
stoichiometry: 1.0
species: 300903
type: SpeciesReference

804094
stoichiometry: 1.0
species: 300404
type: SpeciesReference

310034
units: 756622
value: 0.0
type: LocalParameter

302305
kinetic law: 768051
product: 768027
fast: false
product: 768039
reversible: false
reactant: 768003
reactant: 768015
notes: Abbreviation: R_HMBS_ap EC Number: 2.5.1.61 SUBSYSTEM: Cofactors_PorphyrinMetabolism Equation: M_h2o[ap] + (4.0) M_ppbng[ap] --> M_hmbil[ap] + (4.0) M_nh4[ap] genes: LOCUS:PFL0480w# proteins: GENE ASSOCIATION: (PFL0480w)
name: hydroxymethylbilane_synthase
type: Reaction

306120
units: 756574
value: 0.0
type: LocalParameter

305000
units: 756622
value: 0.0
type: LocalParameter

771268
stoichiometry: 1.0
species: 301783
type: SpeciesReference

780496
stoichiometry: 1.0
species: 301414
type: SpeciesReference

301356
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphatidylglycerol_dioctadecanoyl_n_C180_C42H82O10P1
type: Species

302599
kinetic law: 773394
product: 773382
reactant: 773370
notes: Abbreviation: R_EX_malt_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M[m] alt <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_malt_e_
type: Reaction

789196
stoichiometry: 1.0
species: 300775
type: SpeciesReference

302446
kinetic law: 771425
product: 771413
reactant: 771401
notes: Abbreviation: R_EX_asp_L_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_asp_L <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_asp_L_e_
type: Reaction

817633
stoichiometry: 0.02721
species: 300562
type: SpeciesReference

787253
stoichiometry: 1.0
species: 301446
type: SpeciesReference

302728
kinetic law: 774958
product: 774946
reactant: 774934
notes: Abbreviation: R_PTD1INOt EC Number: SUBSYSTEM: Transport_lipid Equation: M_ptd1ino[c] <==> M_ptd1ino[e] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PTD1INOt
type: Reaction

310572
value: 0.0
type: LocalParameter

309149
units: 756622
value: 0.0
type: LocalParameter

790006
stoichiometry: 1.0
species: 300851
type: SpeciesReference

310035
units: 756574
value: -999999.0
type: LocalParameter

761588
stoichiometry: 1.0
species: 300414
type: SpeciesReference

810413
stoichiometry: 1.0
species: 301533
type: SpeciesReference

797770
stoichiometry: 1.0
species: 300903
type: SpeciesReference

301082
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: D_Mannose_C6H12O6
type: Species

758140
stoichiometry: 1.0
species: 300346
type: SpeciesReference

302013
name: glutamate_synthase_(NADH)
product: 757688
product: 757700
reactant: 757663
reactant: 757639
notes: Abbreviation: R_GLUSx EC Number: 1.4.1.14 SUBSYSTEM: AminoAcids_GluMetabolism Equation: M_akg[c] + M_gln_L[c] + M_h[c] + M_nadh[c] --> (2.0) M_glu_L[c] + M_nad[c] genes: LOCUS:PF14_0334# proteins: GENE ASSOCIATION: (PF14_0334)
type: Reaction
fast: false
reactant: 757651
kinetic law: 757712
reversible: false
reactant: 757675

767475
stoichiometry: 1.0
species: 301130
type: SpeciesReference

756950
stoichiometry: 1.0
species: 300825
type: SpeciesReference

301202
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: Octanoyl_ACP_n_C80ACP_C19H35N2O8PRS
type: Species

305001
units: 756574
value: -999999.0
type: LocalParameter

778931
stoichiometry: 1.0
species: 301593
type: SpeciesReference

309358
units: 756622
value: 0.0
type: LocalParameter

303977
fast: false
notes: Abbreviation: R_DHORD2_mt EC Number: 1.3.3.1 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; Others_MitochondrialElectronFlow Equation: M_dhor_S[m] + M_q8[m] --> M_orot[m] + M_q8h2[m] genes: LOCUS:PFF0160c# proteins: GENE ASSOCIATION: (PFF0160c)
reactant: 804484
product: 804508
reactant: 804496
product: 804520
reversible: false
name: dihydroorotate_oxidase
kinetic law: 804532
type: Reaction

310573
units: 756622
value: 0.0
type: LocalParameter

802427
stoichiometry: 1.0
species: 300414
type: SpeciesReference

302307
type: Reaction
product: 768087
fast: false
reactant: 768063
notes: Abbreviation: R_PPBNGS_ap EC Number: 4.2.1.24 SUBSYSTEM: Cofactors_PorphyrinMetabolism Equation: (2.0) M_5aop[ap] --> M_h[ap] + (2.0) M_h2o[ap] + M_ppbng[ap] genes: LOCUS:PF14_0381# proteins: GENE ASSOCIATION: (PF14_0381)
product: 768075
name: porphobilinogen_synthase
kinetic law: 768111
product: 768099
reversible: false

815469
stoichiometry: 1.0
species: 300538
type: SpeciesReference

305873
units: 756574
value: 999999.0
type: LocalParameter

777663
stoichiometry: 1.0
species: 300136
type: SpeciesReference

308623
units: 756574
value: 999999.0
type: LocalParameter

303353
reactant: 790560
reactant: 790548
product: 790584
reversible: false
kinetic law: 790608
fast: false
product: 790596
name: lysophospholipase
type: Reaction
notes: Abbreviation: R_LPLIPAL2E140 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2agpe140[c] + M_h2o[c] --> M_g3pe[c] + M_h[c] + M_ttdca[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
product: 790572

305002
units: 756574
value: 999999.0
type: LocalParameter

807634
stoichiometry: 1.0
species: 300913
type: SpeciesReference

769624
stoichiometry: 1.0
species: 300332
type: SpeciesReference

302303
notes: Abbreviation: R_FCLT_ap EC Number: 4.99.1.1 SUBSYSTEM: Cofactors_PorphyrinMetabolism Equation: M_fe2[ap] + M_ppp9[ap] --> (2.0) M_h[ap] + M_pheme[ap] genes: LOCUS:MAL13P1_326# proteins: GENE ASSOCIATION: (MAL13P1_326)
reactant: 767942
fast: false
reversible: false
name: ferrochelatase
kinetic law: 767991
product: 767979
type: Reaction
reactant: 767954
product: 767966

301350
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphatidylglycerol_ditetradec_7_enoyl_n_C141_C34H62O10P1
type: Species

816799
stoichiometry: 1.0
species: 301160
type: SpeciesReference

770796
stoichiometry: 1.0
species: 300414
type: SpeciesReference

310037
units: 756574
value: 999999.0
type: LocalParameter

309143
units: 756622
value: 0.0
type: LocalParameter

759633
stoichiometry: 1.0
species: 300198
type: SpeciesReference

301206
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Octanoyl_CoA_n_C80CoA_C29H46N7O17P3S
type: Species

301940
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Proline_C5H9NO2
type: Species

300666
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: protein_disulfide_isomerase_II_oxidized_X
type: Species

306974
value: 0.0
type: LocalParameter

310356
units: 756574
value: 999999.0
type: LocalParameter

786804
stoichiometry: 1.0
species: 301310
type: SpeciesReference

300668
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: protein_disulfide_isomerase_II_reduced_XH2
type: Species

800510
stoichiometry: 1.0
species: 300903
type: SpeciesReference

756598
exponent: -1.0
scale: 0
multipler: 1.0
kind: GRAM
type: SBMLUnit

303971
type: Reaction
name: carbonate_dehydratase
product: 804386
product: 804398
reversible: true
reactant: 804362
kinetic law: 804411
notes: Abbreviation: R_HCO3E EC Number: 4.2.1.1 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; Lipids_FattyAcidSynthesis ; Carbohydrates_PyruvateMetabolism Equation: M[c] o2[c] + M_h2o[c] <==> M_h[c] + M_hco3[c] genes: LOCUS:PF11_0410# proteins: GENE ASSOCIATION: (PF11_0410)
fast: false
reactant: 804374

301204
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: Octanoyl_CoA_n_C80CoA_C29H46N7O17P3S
type: Species

302722
kinetic law: 774886
product: 774874
reactant: 774862
notes: Abbreviation: R_EX_xmp_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_xmp <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_xmp_e_
type: Reaction

813677
stoichiometry: 1.0
species: 301487
type: SpeciesReference

308622
units: 756574
value: 0.0
type: LocalParameter

301080
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: D_Mannose_C6H12O6
type: Species

792771
stoichiometry: 1.0
species: 301703
type: SpeciesReference

304604
kinetic law: 814938
product: 814926
reactant: 814913
notes: Abbreviation: R_3MOBtmt EC Number: SUBSYSTEM: Equation: M_3mob[m] <==> M_3mob[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_3MOBtmt
type: Reaction

310038
value: 0.0
type: LocalParameter

790235
stoichiometry: 1.0
species: 300933
type: SpeciesReference

807188
stoichiometry: 2.0
species: 301390
type: SpeciesReference

309144
units: 756574
value: -999999.0
type: LocalParameter

770688
stoichiometry: 1.0
species: 300911
type: SpeciesReference

774256
stoichiometry: 1.0
species: 301948
type: SpeciesReference

306973
units: 756574
value: 999999.0
type: LocalParameter

817476
stoichiometry: 1.0
species: 300304
type: SpeciesReference

310357
value: 0.0
type: LocalParameter

804214
stoichiometry: 2.0
species: 300332
type: SpeciesReference

800751
stoichiometry: 1.0
species: 300903
type: SpeciesReference

301352
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphatidylglycerol_dihexadecanoyl_n_C160_C38H74O10P1
type: Species

303974
type: Reaction
notes: Abbreviation: R_TMDS EC Number: 2.1.1.45 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; Cofactors_FolateBiosynthesis Equation: M_dump[c] + M[m] lthf[c] --> M_dhf[c] + M_dtmp[c] genes: LOCUS:PFD0830w# proteins: GENE ASSOCIATION: (PFD0830w)
reactant: 804423
reactant: 804435
product: 804459
reversible: false
product: 804447
fast: false
kinetic law: 804471
name: thymidylate_synthase

302161
kinetic law: 763097
product: 763085
reactant: 763073
notes: Abbreviation: R_TPI_ap EC Number: 5.3.1.1 SUBSYSTEM: Carbohydrates_Glycolysis ; Lipids_IsoprenoidsMetabolism Equation: M_dhap[ap] <==> M_g3p[ap] genes: LOCUS:PFC0831w# proteins: GENE ASSOCIATION: (PFC0831w)
fast: false
reversible: true
name: Triose-phosphate_isomerase
type: Reaction

766231
stoichiometry: 1.0
species: 301142
type: SpeciesReference

310359
units: 756622
value: 0.0
type: LocalParameter

790874
stoichiometry: 1.0
species: 300911
type: SpeciesReference

302301
notes: Abbreviation: R_FCLT EC Number: 4.99.1.1 SUBSYSTEM: Cofactors_PorphyrinMetabolism Equation: M_fe2[c] + M_ppp9[c] --> (2.0) M_h[c] + M_pheme[c] genes: LOCUS:MAL13P1_326# proteins: GENE ASSOCIATION: (MAL13P1_326)
product: 767918
kinetic law: 767930
reactant: 767892
reversible: false
product: 767905
reactant: 767879
name: ferrochelatase
fast: false
type: Reaction

307020
units: 756574
value: 999999.0
type: LocalParameter

308621
units: 756622
value: 0.0
type: LocalParameter

774148
stoichiometry: 1.0
species: 301942
type: SpeciesReference

763013
stoichiometry: 1.0
species: 301523
type: SpeciesReference

802575
stoichiometry: 1.0
species: 301641
type: SpeciesReference

306972
units: 756574
value: 0.0
type: LocalParameter

816859
stoichiometry: 1.0
species: 300256
type: SpeciesReference

768546
stoichiometry: 1.0
species: 300739
type: SpeciesReference

300664
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: periplasmic_protein_disulfide_isomerase_I_reduced_XH2
type: Species

301942
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Putrescine_C4H14N2
type: Species

799931
stoichiometry: 1.0
species: 301390
type: SpeciesReference

301208
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Octanoyl_CoA_n_C80CoA_C29H46N7O17P3S
type: Species

793344
stoichiometry: 1.0
species: 301276
type: SpeciesReference

302596
kinetic law: 773358
product: 773346
reactant: 773334
notes: Abbreviation: R_EX_mal_L_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M[m] al_L <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_mal_L_e_
type: Reaction

764304
stoichiometry: 1.0
species: 301517
type: SpeciesReference

303356
notes: Abbreviation: R_LPLIPAL2E141 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2agpe141[c] + M_h2o[c] --> M_g3pe[c] + M_h[c] + M_ttdcea[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
product: 790669
product: 790657
name: lysophospholipase
type: Reaction
fast: false
reversible: false
reactant: 790620
reactant: 790633
product: 790645
kinetic law: 790681

805015
stoichiometry: 1.0
species: 301501
type: SpeciesReference

305005
value: 0.0
type: LocalParameter

307021
value: 0.0
type: LocalParameter

799136
stoichiometry: 1.0
species: 301442
type: SpeciesReference

791515
stoichiometry: 1.0
species: 300556
type: SpeciesReference

309146
units: 756574
value: 999999.0
type: LocalParameter

306971
units: 756622
value: 0.0
type: LocalParameter

794551
stoichiometry: 1.0
species: 300903
type: SpeciesReference

802362
stoichiometry: 1.0
species: 300414
type: SpeciesReference

802177
stoichiometry: 1.0
species: 300414
type: SpeciesReference

768472
stoichiometry: 1.0
species: 300739
type: SpeciesReference

304607
kinetic law: 814974
product: 814962
reactant: 814950
notes: Abbreviation: R_3MOPtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_3mop[m] <==> M_3mop[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_3MOPtmt
type: Reaction

758897
stoichiometry: 1.0
species: 300138
type: SpeciesReference

302725
kinetic law: 774922
product: 774910
reactant: 774898
notes: Abbreviation: R_EX_xtsn_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_xtsn <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_xtsn_e_
type: Reaction

305190
units: 756622
value: 0.0
type: LocalParameter

818152
stoichiometry: 0.7739
species: 301416
type: SpeciesReference

793779
stoichiometry: 1.0
species: 300911
type: SpeciesReference

804666
stoichiometry: 1.0
species: 300731
type: SpeciesReference

310242
value: 0.0
type: LocalParameter

798135
stoichiometry: 1.0
species: 300903
type: SpeciesReference

788340
stoichiometry: 1.0
species: 301008
type: SpeciesReference

803178
stoichiometry: 1.0
species: 301160
type: SpeciesReference

782734
stoichiometry: 1.0
species: 300901
type: SpeciesReference

309780
value: 0.0
type: LocalParameter

309166
units: 756574
value: 0.0
type: LocalParameter

803733
stoichiometry: 1.0
species: 300911
type: SpeciesReference

761143
stoichiometry: 1.0
species: 300104
type: SpeciesReference

799689
stoichiometry: 1.0
species: 301390
type: SpeciesReference

310367
units: 756574
value: 999999.0
type: LocalParameter

306951
units: 756622
value: 0.0
type: LocalParameter

309564
units: 756574
value: 999999.0
type: LocalParameter

303122
product: 785044
type: Reaction
name: R_MECDPDH2_ap
reactant: 785020
product: 785056
fast: false
reactant: 785008
notes: Abbreviation: R_MECDPDH2_ap EC Number: 1.17.7.1 SUBSYSTEM: Lipids_IsoprenoidsMetabolism Equation: M_2mecdp[ap] + M_nadph[ap] --> M_h2mb4p[ap] + M_h2o[ap] + M_nadp[ap] genes: LOCUS:PF10_0221# proteins: GENE ASSOCIATION: (PF10_0221)
product: 785032
reversible: false
kinetic law: 785069

306139
units: 756622
value: 0.0
type: LocalParameter

801814
stoichiometry: 1.0
species: 301416
type: SpeciesReference

306400
units: 756574
value: -999999.0
type: LocalParameter

306807
units: 756622
value: 0.0
type: LocalParameter

805342
stoichiometry: 1.0
species: 300304
type: SpeciesReference

774548
stoichiometry: 1.0
species: 301964
type: SpeciesReference

808579
stoichiometry: 1.0
species: 301258
type: SpeciesReference

303533
reactant: 794793
type: Reaction
product: 794829
notes: Abbreviation: R_PGPP161pp EC Number: 3.1.3.27 SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M_h2o[c] + M_pgp161[c] --> M_pg161[c] + M_pi[c] genes: proteins: GENE ASSOCIATION:
product: 794817
name: phosphatidylglycerophosphatase
fast: false
reactant: 794805
reversible: false
kinetic law: 794841

301615
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Thiamin_monophosphate_C12H16N4O4PS
type: Species

307372
units: 756574
value: 0.0
type: LocalParameter

307371
units: 756622
value: 0.0
type: LocalParameter

763336
stoichiometry: 1.0
species: 300332
type: SpeciesReference

309165
units: 756622
value: 0.0
type: LocalParameter

300672
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: periplasmic_disulfide_isomerasethiol_disulphide_oxidase_reduced_XH2
type: Species

305589
value: 0.0
type: LocalParameter

306952
units: 756574
value: -999999.0
type: LocalParameter

765689
stoichiometry: 1.0
species: 300522
type: SpeciesReference

304502
kinetic law: 813277
product: 813265
reactant: 813253
notes: Abbreviation: R_INSt EC Number: SUBSYSTEM: Transport_base Equation: M_ins[e] <==> M_ins[c] genes: LOCUS:PFA0160c# LOCUS:MAL8P1_32# LOCUS:PF13_0252# LOCUS:PF14_0662# proteins: GENE ASSOCIATION: (PFA0160c) or (MAL8P1_32) or (PF13_0252) or (PF14_0662)
fast: false
reversible: true
name: R_INSt
type: Reaction

783293
stoichiometry: 1.0
species: 300990
type: SpeciesReference

303335
product: 790163
product: 790151
notes: Abbreviation: R_LPLIPAL2A141 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2tdec7eg3p[c] + M_h2o[c] --> M_glyc3p[c] + (2.0) M_h[c] + M_ttdcea[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
reactant: 790127
product: 790139
fast: false
kinetic law: 790175
type: Reaction
reactant: 790115
reversible: false
name: lysophospholipase

797612
stoichiometry: 1.0
species: 299942
type: SpeciesReference

792530
stoichiometry: 1.0
species: 299982
type: SpeciesReference

307484
units: 756574
value: 999999.0
type: LocalParameter

301372
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphatidylglycerophosphate_dioctadec_11_enoyl_n_C181_C42H77O13P2
type: Species

307632
value: 0.0
type: LocalParameter

305879
units: 756622
value: 0.0
type: LocalParameter

787048
stoichiometry: 1.0
species: 301326
type: SpeciesReference

793037
stoichiometry: 1.0
species: 299996
type: SpeciesReference

310240
units: 756574
value: 999999.0
type: LocalParameter

310365
units: 756574
value: -999999.0
type: LocalParameter

306953
units: 756574
value: 999999.0
type: LocalParameter

796516
stoichiometry: 1.0
species: 301142
type: SpeciesReference

762673
stoichiometry: 1.0
species: 300332
type: SpeciesReference

760779
stoichiometry: 1.0
species: 301144
type: SpeciesReference

805453
stoichiometry: 1.0
species: 301567
type: SpeciesReference

801490
stoichiometry: 1.0
species: 301390
type: SpeciesReference

307635
units: 756574
value: 0.0
type: LocalParameter

807962
stoichiometry: 1.0
species: 300913
type: SpeciesReference

769709
stoichiometry: 1.0
species: 301615
type: SpeciesReference

770157
stoichiometry: 1.0
species: 300088
type: SpeciesReference

306809
units: 756574
value: -999999.0
type: LocalParameter

308860
units: 756574
value: 999999.0
type: LocalParameter

302019
kinetic law: 757994
reactant: 757909
product: 757945
name: Glutamate-ammonia_ligase
product: 757982
notes: Abbreviation: R_GLNS EC Number: 6.3.1.2 SUBSYSTEM: AminoAcids_GluMetabolism ; AminoAcids_NitrogenMetabolism Equation: M_atp[c] + M_glu_L[c] + M_nh4[c] --> M_adp[c] + M_gln_L[c] + M_h[c] + M_pi[c] genes: LOCUS:PFI1110w# proteins: GENE ASSOCIATION: (PFI1110w)
product: 757970
type: Reaction
fast: false
reactant: 757933
reversible: false
reactant: 757921
product: 757957

306098
value: 0.0
type: LocalParameter

307483
units: 756574
value: 0.0
type: LocalParameter

309164
value: 0.0
type: LocalParameter

301613
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Thiamin_C12H17N4OS
type: Species

762080
stoichiometry: 2.0
species: 300903
type: SpeciesReference

805888
stoichiometry: 1.0
species: 300899
type: SpeciesReference

815698
stoichiometry: 1.0
species: 300853
type: SpeciesReference

306954
value: 0.0
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300674
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boundary condition: false
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initial concentration: NaN
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305723
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763445
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803805
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310364
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309565
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797490
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806588
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species: 301066
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307634
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307482
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765473
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301370
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphatidylglycerophosphate_dioctadecanoyl_n_C180_C42H81O13P2
type: Species

306099
units: 756622
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782929
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species: 300420
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301509
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: alpha_D_Ribose_1_phosphate_C5H9O8P
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308861
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310363
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306802
units: 756622
value: 0.0
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771837
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species: 300610
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759862
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310246
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772637
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307489
units: 756574
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306404
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309162
units: 756574
value: 999999.0
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767631
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species: 300911
type: SpeciesReference

302017
kinetic law: 757897
reactant: 757821
product: 757871
name: Carbamoyl-phosphate_synthase_(ammonia)
product: 757859
product: 757884
type: Reaction
reactant: 757809
reactant: 757834
fast: false
notes: Abbreviation: R_CBPSam EC Number: 6.3.4.16 SUBSYSTEM: AminoAcids_GluMetabolism ; AminoAcids_NitrogenMetabolism Equation: (2.0) M_atp[c] + M_hco3[c] + M_nh4[c] --> (2.0) M_adp[c] + M[c] bp[c] + (2.0) M_h[c] + M_pi[c] genes: LOCUS:PF13_0044# proteins: GENE ASSOCIATION: (PF13_0044)
product: 757847
reversible: false

306135
units: 756574
value: 0.0
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787809
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species: 300474
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309568
units: 756574
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809655
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species: 300821
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308757
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310588
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306956
units: 756622
value: 0.0
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306803
units: 756574
value: -999999.0
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803539
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species: 300428
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809317
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species: 300404
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305876
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301611
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: Thiamin_C12H17N4OS
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781358
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species: 300512
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781996
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species: 300024
type: SpeciesReference

309161
units: 756574
value: 0.0
type: LocalParameter

303530
notes: Abbreviation: R_PGPP161 EC Number: 3.1.3.27 SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M_h2o[c] + M_pgp161[c] --> M_pg161[c] + M_pi[c] genes: proteins: GENE ASSOCIATION:
name: phosphatidylglycerophosphatase
product: 794769
product: 794757
fast: false
type: Reaction
kinetic law: 794781
reactant: 794745
reversible: false
reactant: 794733

812198
stoichiometry: 1.0
species: 301390
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308863
units: 756622
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307488
units: 756574
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791165
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species: 300911
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306405
units: 756574
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306097
units: 756574
value: 999999.0
type: LocalParameter

303125
kinetic law: 785121
product: 785108
product: 785095
reactant: 785082
notes: Abbreviation: R_MECDPS_ap EC Number: 4.6.1.12 SUBSYSTEM: Lipids_IsoprenoidsMetabolism Equation: M_2p4c2me[ap] --> M_2mecdp[ap] + M[c] mp[ap] genes: LOCUS:PFB0420w# proteins: GENE ASSOCIATION: (PFB0420w)
fast: false
reversible: false
name: 2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase
type: Reaction

800981
stoichiometry: 1.0
species: 300108
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307636
units: 756574
value: 999999.0
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806964
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species: 300709
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308758
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309567
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306804
units: 756574
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789715
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species: 300911
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306957
units: 756574
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310361
units: 756574
value: 999999.0
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305720
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value: -999999.0
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310587
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value: 999999.0
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758485
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species: 301607
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814189
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species: 300957
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757921
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species: 300829
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310244
units: 756574
value: 0.0
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791723
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species: 301272
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306094
units: 756622
value: 0.0
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309160
units: 756622
value: 0.0
type: LocalParameter

303338
name: lysophospholipase
kinetic law: 790247
reversible: false
notes: Abbreviation: R_LPLIPAL2A160 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2hdecg3p[c] + M_h2o[c] --> M_glyc3p[c] + (2.0) M_h[c] + M_hdca[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
product: 790223
fast: false
product: 790211
reactant: 790187
product: 790235
reactant: 790199
type: Reaction

302015
reversible: false
reactant: 757749
product: 757761
product: 757773
reactant: 757736
name: Glutamate-tRNA_ligase
fast: false
product: 757785
kinetic law: 757797
type: Reaction
reactant: 757724
notes: Abbreviation: R_GLUTRS EC Number: 6.1.1.17 SUBSYSTEM: AminoAcids_GluMetabolism Equation: M_atp[c] + M_glu_L[c] + M_trnaglu[c] --> M_amp[c] + M_glutrna[c] + M_ppi[c] genes: LOCUS:MAL13P1_281# LOCUS:PF13_0170# LOCUS:PF13_0257# proteins: GENE ASSOCIATION: (MAL13P1_281) or (PF13_0170) or (PF13_0257)

308864
units: 756574
value: 0.0
type: LocalParameter

307487
units: 756622
value: 0.0
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306402
units: 756574
value: 999999.0
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307639
units: 756622
value: 0.0
type: LocalParameter

306805
value: 0.0
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306137
units: 756574
value: 999999.0
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308759
units: 756574
value: 0.0
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813447
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species: 301749
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772911
stoichiometry: 1.0
species: 301874
type: SpeciesReference

300670
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: periplasmic_disulfide_isomerasethiol_disulphide_oxidase_oxidized_X
type: Species

306958
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value: 999999.0
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799377
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species: 301390
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310360
units: 756574
value: -999999.0
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763221
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species: 300849
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782527
stoichiometry: 1.0
species: 300132
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306095
units: 756574
value: 0.0
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812937
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species: 300550
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310243
units: 756622
value: 0.0
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785883
stoichiometry: 1.0
species: 300911
type: SpeciesReference

309569
units: 756574
value: 999999.0
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307486
value: 0.0
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306403
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308865
units: 756574
value: 999999.0
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307638
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306959
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306138
value: 0.0
type: LocalParameter

777000
stoichiometry: 1.0
species: 301146
type: SpeciesReference

307746
value: 0.0
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308608
value: 0.0
type: LocalParameter

302861
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product: 778835
reactant: 778799
notes: Abbreviation: R_AGPAT120_ap EC Number: 2.3.1.51 SUBSYSTEM: Lipids_FattyAcidSynthesis ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_1ddecg3p[ap] + M_ddcaACP[ap] --> M_ACP[ap] + M_pa120[ap] genes: LOCUS:PF14_0421# proteins: GENE ASSOCIATION: (PF14_0421)
kinetic law: 778847
name: 1-acylglycerol-3-phosphate_O-acyltransferase
product: 778823
reactant: 778811
type: Reaction
fast: false

810629
stoichiometry: 1.0
species: 301621
type: SpeciesReference

300935
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Hexadecanoate_n_C160_C16H31O2
type: Species

308753
units: 756622
value: 0.0
type: LocalParameter

306513
value: 0.0
type: LocalParameter

309271
units: 756574
value: -999999.0
type: LocalParameter

779066
stoichiometry: 1.0
species: 300270
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303017
kinetic law: 782857
product: 782844
product: 782831
reactant: 782819
notes: Abbreviation: R_3HAD180_ap EC Number: 4.2.1.61 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3hoctaACP[ap] --> M_h2o[ap] + M_toctd2eACP[ap] genes: LOCUS:PF13_0128# proteins: GENE ASSOCIATION: (PF13_0128)
fast: false
reversible: false
name: 3-Hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase
type: Reaction

306244
units: 756622
value: 0.0
type: LocalParameter

309788
units: 756574
value: -999999.0
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307231
units: 756574
value: 0.0
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788631
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species: 301703
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811848
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species: 301238
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799269
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species: 301130
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771728
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species: 300570
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802213
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species: 300678
type: SpeciesReference

304917
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310137
value: 0.0
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305582
units: 756622
value: 0.0
type: LocalParameter

301501
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: Ubiquinone_8_C49H74O4
type: Species

808276
stoichiometry: 1.0
species: 301392
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309909
units: 756574
value: -999999.0
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300560
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: dAMP_C10H12N5O6P
type: Species

308193
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value: 0.0
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307745
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value: 999999.0
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790790
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species: 300775
type: SpeciesReference

308867
value: 0.0
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791274
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species: 300052
type: SpeciesReference

307379
value: 0.0
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306514
units: 756622
value: 0.0
type: LocalParameter

301503
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Ubiquinol_8_C49H76O4
type: Species

308754
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value: 0.0
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306245
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value: 0.0
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307230
units: 756622
value: 0.0
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309787
units: 756622
value: 0.0
type: LocalParameter

309270
units: 756622
value: 0.0
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789934
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species: 300911
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781467
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species: 301146
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809426
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species: 300843
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310136
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value: 999999.0
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309048
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310471
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value: 999999.0
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309908
units: 756622
value: 0.0
type: LocalParameter

305436
units: 756574
value: 999999.0
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773020
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species: 301880
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779693
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308868
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value: 0.0
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308755
units: 756574
value: 999999.0
type: LocalParameter

307748
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value: 0.0
type: LocalParameter

762529
stoichiometry: 1.0
species: 300332
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307019
units: 756574
value: -999999.0
type: LocalParameter

301928
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Ornithine_C5H13N2O2
type: Species

300933
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Hexadecanoate_n_C160_C16H31O2
type: Species

813556
stoichiometry: 1.0
species: 301404
type: SpeciesReference

307378
units: 756574
value: 999999.0
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303812
reactant: 800739
type: Reaction
product: 800763
kinetic law: 800787
fast: false
name: 5'-nucleotidase
reactant: 800751
reversible: false
notes: Abbreviation: R_NTD8pp EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_dgmp[c] + M_h2o[c] --> M_dgsn[c] + M_pi[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
product: 800775

310470
units: 756574
value: -999999.0
type: LocalParameter

304508
kinetic law: 813350
product: 813338
reactant: 813326
notes: Abbreviation: R_THYMDt1 EC Number: SUBSYSTEM: Transport_base Equation: M_thymd[e] --> M_thymd[c] genes: LOCUS:PFA0160c# LOCUS:MAL8P1_32# LOCUS:PF13_0252# LOCUS:PF14_0662# proteins: GENE ASSOCIATION: (PFA0160c) or (MAL8P1_32) or (PF13_0252) or (PF14_0662)
fast: false
reversible: false
name: R_THYMDt1
type: Reaction

761420
stoichiometry: 1.0
species: 300352
type: SpeciesReference

309047
units: 756574
value: 999999.0
type: LocalParameter

758376
stoichiometry: 1.0
species: 300538
type: SpeciesReference

306800
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790415
stoichiometry: 1.0
species: 300903
type: SpeciesReference

300562
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: dATP_C10H12N5O12P3
type: Species

308191
value: 0.0
type: LocalParameter

307018
units: 756622
value: 0.0
type: LocalParameter

806853
stoichiometry: 1.0
species: 300911
type: SpeciesReference

308869
units: 756574
value: 0.0
type: LocalParameter

306247
units: 756574
value: 999999.0
type: LocalParameter

300108
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 3_5_Cyclic_dAMP_C10H11N5O5P
type: Species

303014
kinetic law: 782807
product: 782794
product: 782782
reactant: 782770
notes: Abbreviation: R_3HAD161_ap EC Number: 4.2.1.61 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3hcpalm9eACP[ap] --> M_h2o[ap] + M_t3c9palmeACP[ap] genes: LOCUS:PF13_0128# proteins: GENE ASSOCIATION: (PF13_0128)
fast: false
reversible: false
name: 3-Hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase
type: Reaction

309785
value: 0.0
type: LocalParameter

307377
units: 756574
value: 0.0
type: LocalParameter

306512
units: 756574
value: 999999.0
type: LocalParameter

779549
stoichiometry: 1.0
species: 301128
type: SpeciesReference

310134
units: 756574
value: -999999.0
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782636
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species: 300901
type: SpeciesReference

759754
stoichiometry: 1.0
species: 300414
type: SpeciesReference

303836
kinetic law: 801272
reactant: 801235
notes: Abbreviation: R_PPA EC Number: 3.6.1.1 SUBSYSTEM: Nucleotides_PurineMetabolism ; Lipids_TerpenoidMetabolism Equation: M_h2o[c] + M_ppi[c] --> M_h[c] + (2.0) M_pi[c] genes: LOCUS:PF14_0541# LOCUS:PFC0710w# proteins: GENE ASSOCIATION: (PF14_0541) or (PFC0710w)
product: 801259
product: 801247
type: Reaction
reactant: 801223
fast: false
name: inorganic_diphosphatase
reversible: false

816509
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species: 301707
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308192
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value: 0.0
type: LocalParameter

309784
units: 756574
value: 999999.0
type: LocalParameter

307235
units: 756622
value: 0.0
type: LocalParameter

304505
kinetic law: 813313
product: 813301
reactant: 813289
notes: Abbreviation: R_PAPt EC Number: SUBSYSTEM: Transport_base Equation: M_pap[e] <==> M_pap[c] genes: LOCUS:PFA0160c# LOCUS:MAL8P1_32# LOCUS:PF13_0252# LOCUS:PF14_0662# proteins: GENE ASSOCIATION: (PFA0160c) or (MAL8P1_32) or (PF13_0252) or (PF14_0662)
fast: false
reversible: true
name: R_PAPt
type: Reaction

307376
units: 756622
value: 0.0
type: LocalParameter

307742
units: 756622
value: 0.0
type: LocalParameter

303227
kinetic law: 787482
product: 787469
reactant: 787421
product: 787457
reactant: 787433
name: CDP-diacylglycerol-serine_O-phosphatidyltransferase
notes: Abbreviation: R_PSSA161 EC Number: 2.7.8.8 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M[c] dpdhdec9eg[c] + M_ser_L[c] --> M[c] mp[c] + M_h[c] + M_ps161[c] genes: LOCUS:MAL13P1_335# proteins: GENE ASSOCIATION: (MAL13P1_335)
product: 787445
type: Reaction
fast: false
reversible: false

301619
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Threonine_C4H9NO3
type: Species

304912
units: 756622
value: 0.0
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300931
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: Hexadecanoate_n_C160_C16H31O2
type: Species

306248
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781767
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species: 301140
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794116
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species: 300851
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786295
stoichiometry: 1.0
species: 300911
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799798
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species: 300634
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305433
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768981
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species: 301344
type: SpeciesReference

300564
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: Decanoyl_ACP_n_C100ACP_C21H39N2O8PRS
type: Species

309560
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type: LocalParameter

305726
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type: LocalParameter

305586
units: 756574
value: 999999.0
type: LocalParameter

310133
units: 756622
value: 0.0
type: LocalParameter

304913
units: 756574
value: 0.0
type: LocalParameter

804775
stoichiometry: 1.0
species: 301501
type: SpeciesReference

303815
product: 800824
notes: Abbreviation: R_NTD9 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_gmp[c] + M_h2o[c] --> M_gsn[c] + M_pi[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
fast: false
product: 800836
reactant: 800800
reactant: 800812
type: Reaction
name: 5'-nucleotidase
reversible: false
kinetic law: 800848

793188
stoichiometry: 1.0
species: 300911
type: SpeciesReference

309275
units: 756622
value: 0.0
type: LocalParameter

793888
stoichiometry: 1.0
species: 300464
type: SpeciesReference

766569
stoichiometry: 1.0
species: 300903
type: SpeciesReference

309274
value: 0.0
type: LocalParameter

764195
stoichiometry: 1.0
species: 301509
type: SpeciesReference

784379
stoichiometry: 1.0
species: 301102
type: SpeciesReference

780069
stoichiometry: 1.0
species: 301202
type: SpeciesReference

308750
units: 756574
value: 999999.0
type: LocalParameter

307741
value: 0.0
type: LocalParameter

301507
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: D_Ribose_1_5_bisphosphate_C5H8O11P2
type: Species

303695
reactant: 798317
reactant: 798329
product: 798365
notes: Abbreviation: R_CYOOm_mt EC Number: 1.9.3.1 SUBSYSTEM: Others_MitochondrialElectronFlow Equation: (4.0) M_focytc[m] + (6.0) M_h[m] + M_o2[m] --> (6.0) M_h[c] + (4.0) M_ficytc[m] + (2.0) M_h2o[m] genes: LOCUS:COI# LOCUS:COXIII# LOCUS:PF14_0288# LOCUS:PF14_0331# LOCUS:PF14_0721# LOCUS:PFI1365w# LOCUS:PFI1375w# proteins: GENE ASSOCIATION: COI or (COXIII) or (PF14_0288) or (PF14_0331) or (PF14_0721) or (PFI1365w) or (PFI1375w)
fast: false
reversible: false
kinetic law: 798389
product: 798377
name: cytochrome-c_oxidase
product: 798353
reactant: 798341
type: Reaction

306249
units: 756622
value: 0.0
type: LocalParameter

308198
units: 756622
value: 0.0
type: LocalParameter

306510
units: 756574
value: -999999.0
type: LocalParameter

789075
stoichiometry: 1.0
species: 301697
type: SpeciesReference

302864
reactant: 778859
kinetic law: 778907
reactant: 778871
name: 1-acylglycerol-3-phosphate_O-acyltransferase
type: Reaction
product: 778883
fast: false
product: 778895
notes: Abbreviation: R_AGPAT140_ap EC Number: 2.3.1.51 SUBSYSTEM: Lipids_FattyAcidSynthesis ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_1tdecg3p[ap] + M[m] yrsACP[ap] --> M_ACP[ap] + M_pa140[ap] genes: LOCUS:PF14_0421# proteins: GENE ASSOCIATION: (PF14_0421)
reversible: false

309903
units: 756574
value: -999999.0
type: LocalParameter

300801
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: GDP_C10H12N5O11P2
type: Species

781551
stoichiometry: 9.0
species: 300909
type: SpeciesReference

310475
units: 756574
value: -999999.0
type: LocalParameter

791952
stoichiometry: 1.0
species: 300016
type: SpeciesReference

307480
value: 0.0
type: LocalParameter

814744
stoichiometry: 1.0
species: 300414
type: SpeciesReference

300298
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Acetaldehyde_C2H4O
type: Species

305432
units: 756622
value: 0.0
type: LocalParameter

303539
reactant: 794913
product: 794937
name: phosphatidylglycerophosphatase
type: Reaction
reactant: 794925
product: 794949
notes: Abbreviation: R_PGPP180pp EC Number: 3.1.3.27 SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M_h2o[c] + M_pgp180[c] --> M_pg180[c] + M_pi[c] genes: proteins: GENE ASSOCIATION:
reversible: false
kinetic law: 794961
fast: false

310132
value: 0.0
type: LocalParameter

798025
stoichiometry: 1.0
species: 301280
type: SpeciesReference

803286
stoichiometry: 2.0
species: 300911
type: SpeciesReference

782844
stoichiometry: 1.0
species: 301633
type: SpeciesReference

307374
value: 0.0
type: LocalParameter

301617
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Thiamine_diphosphate_C12H16N4O7P2S
type: Species

307631
units: 756574
value: 999999.0
type: LocalParameter

307233
value: 0.0
type: LocalParameter

309782
units: 756574
value: -999999.0
type: LocalParameter

308751
value: 0.0
type: LocalParameter

772357
stoichiometry: 1.0
species: 301844
type: SpeciesReference

309906
value: 0.0
type: LocalParameter

303011
kinetic law: 782758
product: 782746
product: 782734
reactant: 782721
notes: Abbreviation: R_3HAD160_ap EC Number: 4.2.1.61 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3hpalmACP[ap] --> M_h2o[ap] + M_tpalm2eACP[ap] genes: LOCUS:PF13_0128# proteins: GENE ASSOCIATION: (PF13_0128)
fast: false
reversible: false
name: 3-Hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase
type: Reaction

775636
stoichiometry: 1.0
species: 300456
type: SpeciesReference

303692
product: 798293
fast: false
notes: Abbreviation: R_PAPA181pp EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa181[c] --> M_12dgr181[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)
name: phosphatidate_phosphatase
product: 798280
reactant: 798256
reversible: false
kinetic law: 798305
type: Reaction
reactant: 798268

309562
units: 756574
value: 0.0
type: LocalParameter

305729
units: 756622
value: 0.0
type: LocalParameter

760888
stoichiometry: 1.0
species: 300346
type: SpeciesReference

300566
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: Decanoate_n_C100_C10H19O2
type: Species

763553
stoichiometry: 1.0
species: 300809
type: SpeciesReference

308195
units: 756574
value: 999999.0
type: LocalParameter

762299
stoichiometry: 1.0
species: 300853
type: SpeciesReference

310474
units: 756622
value: 0.0
type: LocalParameter

303839
reversible: false
name: inorganic_diphosphatase
product: 801308
product: 801332
notes: Abbreviation: R_PPA2 EC Number: 3.6.1.1 SUBSYSTEM: Nucleotides_PurineMetabolism ; Lipids_TerpenoidMetabolism Equation: M_h2o[c] + M_pppi[c] --> M_h[c] + M_pi[c] + M_ppi[c] genes: LOCUS:PF14_0541# LOCUS:PFC0710w# proteins: GENE ASSOCIATION: (PF14_0541) or (PFC0710w)
reactant: 801284
type: Reaction
fast: false
reactant: 801296
kinetic law: 801344
product: 801320

775780
stoichiometry: 1.0
species: 300570
type: SpeciesReference

762190
stoichiometry: 1.0
species: 300098
type: SpeciesReference

806141
stoichiometry: 1.0
species: 301390
type: SpeciesReference

794829
stoichiometry: 1.0
species: 301390
type: SpeciesReference

303536
product: 794889
reactant: 794865
type: Reaction
reactant: 794853
notes: Abbreviation: R_PGPP180 EC Number: 3.1.3.27 SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M_h2o[c] + M_pgp180[c] --> M_pg180[c] + M_pi[c] genes: proteins: GENE ASSOCIATION:
kinetic law: 794901
fast: false
name: phosphatidylglycerophosphatase
reversible: false
product: 794877

307373
units: 756574
value: 999999.0
type: LocalParameter

307232
units: 756574
value: 999999.0
type: LocalParameter

768027
stoichiometry: 1.0
species: 300972
type: SpeciesReference

303224
product: 787373
name: CDP-diacylglycerol-serine_O-phosphatidyltransferase
fast: false
reactant: 787349
type: Reaction
product: 787397
product: 787385
kinetic law: 787409
notes: Abbreviation: R_PSSA160 EC Number: 2.7.8.8 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M[c] dpdhdecg[c] + M_ser_L[c] --> M[c] mp[c] + M_h[c] + M_ps160[c] genes: LOCUS:MAL13P1_335# proteins: GENE ASSOCIATION: (MAL13P1_335)
reactant: 787361
reversible: false

811424
stoichiometry: 1.0
species: 301416
type: SpeciesReference

301505
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: Ubiquinol_8_C49H76O4
type: Species

309272
units: 756574
value: 999999.0
type: LocalParameter

309781
units: 756622
value: 0.0
type: LocalParameter

302460
kinetic law: 771608
product: 771596
reactant: 771584
notes: Abbreviation: R_EX_cys_L_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M[c] ys_L <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_cys_L_e_
type: Reaction

309905
units: 756574
value: 999999.0
type: LocalParameter

765051
stoichiometry: 1.0
species: 300514
type: SpeciesReference

777204
stoichiometry: 1.0
species: 300909
type: SpeciesReference

307743
units: 756574
value: 0.0
type: LocalParameter

778726
stoichiometry: 1.0
species: 300921
type: SpeciesReference

806697
stoichiometry: 1.0
species: 300476
type: SpeciesReference

309561
units: 756622
value: 0.0
type: LocalParameter

796832
stoichiometry: 1.0
species: 300775
type: SpeciesReference

781032
stoichiometry: 1.0
species: 300901
type: SpeciesReference

757651
stoichiometry: 1.0
species: 300819
type: SpeciesReference

811078
stoichiometry: 1.0
species: 301266
type: SpeciesReference

308196
value: 0.0
type: LocalParameter

774681
stoichiometry: 1.0
species: 301731
type: SpeciesReference

310473
value: 0.0
type: LocalParameter

758606
stoichiometry: 1.0
species: 300859
type: SpeciesReference

776497
stoichiometry: 1.0
species: 301018
type: SpeciesReference

310130
units: 756574
value: 999999.0
type: LocalParameter

303818
reactant: 800872
type: Reaction
kinetic law: 800908
reactant: 800860
notes: Abbreviation: R_NTD9pp EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_gmp[c] + M_h2o[c] --> M_gsn[c] + M_pi[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
fast: false
product: 800884
reversible: false
name: 5'-nucleotidase
product: 800896

305583
units: 756574
value: 0.0
type: LocalParameter

300296
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Acetaldehyde_C2H4O
type: Species

304914
units: 756574
value: 999999.0
type: LocalParameter

802876
stoichiometry: 2.0
species: 300911
type: SpeciesReference

759417
stoichiometry: 1.0
species: 300524
type: SpeciesReference

760900
stoichiometry: 1.0
species: 301374
type: SpeciesReference

808495
stoichiometry: 1.0
species: 301523
type: SpeciesReference

771945
stoichiometry: 1.0
species: 300703
type: SpeciesReference

769866
stoichiometry: 1.0
species: 301234
type: SpeciesReference

799834
stoichiometry: 1.0
species: 300632
type: SpeciesReference

307238
value: 0.0
type: LocalParameter

800872
stoichiometry: 1.0
species: 300903
type: SpeciesReference

790572
stoichiometry: 1.0
species: 300775
type: SpeciesReference

766134
stoichiometry: 3.0
species: 300903
type: SpeciesReference

300568
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Decanoate_n_C100_C10H19O2
type: Species

309052
units: 756574
value: 999999.0
type: LocalParameter

302177
product: 763625
fast: false
type: Reaction
name: hexokinase
reactant: 763613
reversible: false
notes: Abbreviation: R_HEX8 EC Number: 2.7.1.1 SUBSYSTEM: Carbohydrates_MannoseFructoseMetabolism ; Carbohydrates_Glycolysis Equation: M_atp[c] + M[m] an[c] --> M_adp[c] + M[m] an6p[c] + M_h[c] genes: LOCUS:PFF1155w# proteins: GENE ASSOCIATION: (PFF1155w)
product: 763649
kinetic law: 763661
reactant: 763601
product: 763637

805730
stoichiometry: 1.0
species: 301416
type: SpeciesReference

788413
stoichiometry: 1.0
species: 301008
type: SpeciesReference

309267
units: 756574
value: 999999.0
type: LocalParameter

817066
stoichiometry: 19.0
species: 300965
type: SpeciesReference

757361
stoichiometry: 1.0
species: 301416
type: SpeciesReference

762940
stoichiometry: 1.0
species: 300783
type: SpeciesReference

300102
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 2_tetradecanoyl_sn_glycerol_3_phosphate_C17H34O7P1
type: Species

308612
units: 756574
value: 999999.0
type: LocalParameter

301934
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
type: Species

816132
stoichiometry: 1.0
species: 301200
type: SpeciesReference

301078
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: D_Mannose_6_phosphate_C6H11O9P
type: Species

764834
stoichiometry: 1.0
species: 300911
type: SpeciesReference

309912
value: 0.0
type: LocalParameter

308189
units: 756574
value: 999999.0
type: LocalParameter

303686
reversible: false
notes: Abbreviation: R_PAPA180pp EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa180[c] --> M_12dgr180[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)
fast: false
product: 798159
reactant: 798135
reactant: 798147
product: 798171
type: Reaction
kinetic law: 798183
name: phosphatidate_phosphatase

307013
units: 756622
value: 0.0
type: LocalParameter

302451
kinetic law: 771499
product: 771487
reactant: 771475
notes: Abbreviation: R_EX_cholesterol EC Number: SUBSYSTEM: Exchange Equation: [e] : M[c] hsterol <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_cholesterol
type: Reaction

790996
stoichiometry: 1.0
species: 300903
type: SpeciesReference

769502
stoichiometry: 1.0
species: 301611
type: SpeciesReference

758264
stoichiometry: 1.0
species: 301146
type: SpeciesReference

304727
kinetic law: 816485
product: 816473
reactant: 816461
notes: Abbreviation: R_THFtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_thf[m] <==> M_thf[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_THFtmt
type: Reaction

306509
units: 756622
value: 0.0
type: LocalParameter

304091
product: 806914
reactant: 806890
fast: false
product: 806926
notes: Abbreviation: R_ETHAt2pp EC Number: SUBSYSTEM: Transport Equation: M[e] tha[e] + M_h[e] --> M[e] tha[c] + M_h[c] genes: proteins: GENE ASSOCIATION:
reactant: 806902
kinetic law: 806938
type: Reaction
name: R_ETHAt2pp
reversible: false

785170
stoichiometry: 1.0
species: 300216
type: SpeciesReference

309264
units: 756622
value: 0.0
type: LocalParameter

779392
stoichiometry: 1.0
species: 301573
type: SpeciesReference

302867
type: Reaction
reactant: 778919
notes: Abbreviation: R_AGPAT141_ap EC Number: 2.3.1.51 SUBSYSTEM: Lipids_FattyAcidSynthesis ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_1tdec7eg3p[ap] + M_tdeACP[ap] --> M_ACP[ap] + M_pa141[ap] genes: LOCUS:PF14_0421# proteins: GENE ASSOCIATION: (PF14_0421)
fast: false
reactant: 778931
reversible: false
name: 1-acylglycerol-3-phosphate_O-acyltransferase
kinetic law: 778967
product: 778955
product: 778943

792109
stoichiometry: 1.0
species: 300594
type: SpeciesReference

310477
units: 756574
value: 999999.0
type: LocalParameter

308188
units: 756574
value: 0.0
type: LocalParameter

305187
value: 0.0
type: LocalParameter

309913
units: 756622
value: 0.0
type: LocalParameter

308615
units: 756622
value: 0.0
type: LocalParameter

302175
kinetic law: 763589
product: 763577
product: 763565
reactant: 763553
notes: Abbreviation: R_GMAND EC Number: 4.2.1.47 SUBSYSTEM: Carbohydrates_MannoseFructoseMetabolism Equation: M_gdpmann[c] --> M_gdpddman[c] + M_h2o[c] genes: LOCUS:PF08_0077# proteins: GENE ASSOCIATION: (PF08_0077)
fast: false
reversible: false
name: GDP-mannose_4,6-dehydratase
type: Reaction

770470
stoichiometry: 1.0
species: 300895
type: SpeciesReference

303980
name: R_DURIPP
type: Reaction
reactant: 804544
product: 804581
notes: Abbreviation: R_DURIPP EC Number: SUBSYSTEM: Nucleotides_PyrimidineMetabolism Equation: M_duri[c] + M_pi[c] <==> M_2dr1p[c] + M_ura[c] genes: LOCUS:PFE0660c# proteins: GENE ASSOCIATION: (PFE0660c)
kinetic law: 804593
reversible: true
fast: false
product: 804569
reactant: 804557

307236
units: 756574
value: 0.0
type: LocalParameter

813775
stoichiometry: 1.0
species: 300911
type: SpeciesReference

307010
units: 756574
value: 999999.0
type: LocalParameter

309050
units: 756622
value: 0.0
type: LocalParameter

767942
stoichiometry: 1.0
species: 300721
type: SpeciesReference

786854
stoichiometry: 1.0
species: 300514
type: SpeciesReference

795926
stoichiometry: 1.0
species: 300961
type: SpeciesReference

306508
value: 0.0
type: LocalParameter

809207
stoichiometry: 1.0
species: 300911
type: SpeciesReference

309265
units: 756574
value: 0.0
type: LocalParameter

300100
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 2_tetradec_7_enoyl_sn_glycerol_3_phosphate_C17H32O7P1
type: Species

801066
stoichiometry: 1.0
species: 300911
type: SpeciesReference

787676
stoichiometry: 1.0
species: 300911
type: SpeciesReference

760477
stoichiometry: 1.0
species: 301553
type: SpeciesReference

767739
stoichiometry: 2.0
species: 300512
type: SpeciesReference

790633
stoichiometry: 1.0
species: 300903
type: SpeciesReference

309340
value: 0.0
type: LocalParameter

310478
value: 0.0
type: LocalParameter

783403
stoichiometry: 1.0
species: 300302
type: SpeciesReference

308187
units: 756622
value: 0.0
type: LocalParameter

800413
stoichiometry: 1.0
species: 301625
type: SpeciesReference

779200
stoichiometry: 1.0
species: 301286
type: SpeciesReference

308614
value: 0.0
type: LocalParameter

309914
units: 756574
value: -999999.0
type: LocalParameter

786707
stoichiometry: 1.0
species: 300911
type: SpeciesReference

307237
units: 756574
value: 999999.0
type: LocalParameter

301932
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
type: Species

807538
stoichiometry: 1.0
species: 300895
type: SpeciesReference

303233
product: 787603
reversible: false
product: 787616
product: 787591
reactant: 787567
name: CDP-diacylglycerol-serine_O-phosphatidyltransferase
type: Reaction
notes: Abbreviation: R_PSSA181 EC Number: 2.7.8.8 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M[c] dpdodec11eg[c] + M_ser_L[c] --> M[c] mp[c] + M_h[c] + M_ps181[c] genes: LOCUS:MAL13P1_335# proteins: GENE ASSOCIATION: (MAL13P1_335)
kinetic law: 787628
fast: false
reactant: 787579

810933
stoichiometry: 1.0
species: 301128
type: SpeciesReference

307011
value: 0.0
type: LocalParameter

300929
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Homocysteine
type: Species

756695
exponent: 1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

309051
units: 756574
value: 0.0
type: LocalParameter

306507
units: 756574
value: 999999.0
type: LocalParameter

804811
stoichiometry: 1.0
species: 301136
type: SpeciesReference

776277
stoichiometry: 0.1
species: 300646
type: SpeciesReference

309056
units: 756574
value: -999999.0
type: LocalParameter

304724
kinetic law: 816449
product: 816437
reactant: 816425
notes: Abbreviation: R_SUCCtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_succ[m] <==> M_succ[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_SUCCtmt
type: Reaction

300106
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 3_5_Cyclic_CMP_C9H11N3O7P
type: Species

307016
value: 0.0
type: LocalParameter

303008
kinetic law: 782709
product: 782697
product: 782684
reactant: 782672
notes: Abbreviation: R_3HAD141_ap EC Number: 4.2.1.61 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3hcmrs7eACP[ap] --> M_h2o[ap] + M_t3c7mrseACP[ap] genes: LOCUS:PF13_0128# proteins: GENE ASSOCIATION: (PF13_0128)
fast: false
reversible: false
name: 3-Hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase
type: Reaction

779765
stoichiometry: 1.0
species: 301128
type: SpeciesReference

303230
type: Reaction
name: CDP-diacylglycerol-serine_O-phosphatidyltransferase
reactant: 787506
notes: Abbreviation: R_PSSA180 EC Number: 2.7.8.8 SUBSYSTEM: Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M[c] dpdodecg[c] + M_ser_L[c] --> M[c] mp[c] + M_h[c] + M_ps180[c] genes: LOCUS:MAL13P1_335# proteins: GENE ASSOCIATION: (MAL13P1_335)
fast: false
product: 787543
kinetic law: 787555
product: 787518
reversible: false
product: 787530
reactant: 787494

302454
kinetic law: 771536
product: 771524
reactant: 771511
notes: Abbreviation: R_EX_cit_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M[c] it <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_cit_e_
type: Reaction

768243
stoichiometry: 3.0
species: 300757
type: SpeciesReference

309341
units: 756622
value: 0.0
type: LocalParameter

756854
stoichiometry: 1.0
species: 300825
type: SpeciesReference

307737
units: 756622
value: 0.0
type: LocalParameter

303833
notes: Abbreviation: R_PDE5 EC Number: 3.1.4.17 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_35ccmp[c] + M_h2o[c] --> M[c] mp[c] + M_h[c] genes: LOCUS:MAL13P1_118# LOCUS:MAL13P1_119# LOCUS:PF14_0672# LOCUS:PFL0475w# proteins: GENE ASSOCIATION: (MAL13P1_118) or (MAL13P1_119) or (PF14_0672) or (PFL0475w)
reactant: 801163
fast: false
type: Reaction
reactant: 801175
product: 801187
kinetic law: 801211
reversible: false
name: 3',5'-cyclic-nucleotide_phosphodiesterase
product: 801199

789292
stoichiometry: 1.0
species: 300939
type: SpeciesReference

795177
stoichiometry: 1.0
species: 300911
type: SpeciesReference

773479
stoichiometry: 1.0
species: 301126
type: SpeciesReference

305291
value: 0.0
type: LocalParameter

305429
value: 0.0
type: LocalParameter

817731
stoichiometry: 0.3505
species: 300829
type: SpeciesReference

768763
stoichiometry: 1.0
species: 300196
type: SpeciesReference

794286
stoichiometry: 1.0
species: 301390
type: SpeciesReference

310020
units: 756574
value: 999999.0
type: LocalParameter

798714
stoichiometry: 1.0
species: 301160
type: SpeciesReference

797180
stoichiometry: 1.0
species: 300380
type: SpeciesReference

306505
units: 756574
value: -999999.0
type: LocalParameter

767041
stoichiometry: 1.0
species: 300644
type: SpeciesReference

764713
stoichiometry: 1.0
species: 300292
type: SpeciesReference

304610
kinetic law: 815011
product: 814999
reactant: 814986
notes: Abbreviation: R_4HBAtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_4hba[m] <==> M_4hba[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_4HBAtmt
type: Reaction

306240
units: 756574
value: 0.0
type: LocalParameter

301074
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Maltose_C12H22O11
type: Species

300927
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Homocysteine_C4H9NO2S
type: Species

309342
units: 756574
value: 0.0
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307738
units: 756574
value: 0.0
type: LocalParameter

301938
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: _R_Pantothenate_C9H16NO5
type: Species

301210
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

308616
units: 756574
value: 0.0
type: LocalParameter

305426
units: 756574
value: 999999.0
type: LocalParameter

811351
stoichiometry: 1.0
species: 301390
type: SpeciesReference

802055
stoichiometry: 1.0
species: 300414
type: SpeciesReference

309268
value: 0.0
type: LocalParameter

798570
stoichiometry: 1.0
species: 300578
type: SpeciesReference

795383
stoichiometry: 1.0
species: 301549
type: SpeciesReference

758751
stoichiometry: 1.0
species: 301677
type: SpeciesReference

303689
fast: false
reactant: 798207
reactant: 798195
name: phosphatidate_phosphatase
type: Reaction
product: 798231
reversible: false
notes: Abbreviation: R_PAPA181 EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa181[c] --> M_12dgr181[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)
kinetic law: 798243
product: 798219

302179
reactant: 763686
reactant: 763699
fast: false
type: Reaction
reversible: false
notes: Abbreviation: R_MAN1PT EC Number: 2.7.7.13 SUBSYSTEM: Carbohydrates_MannoseFructoseMetabolism Equation: M_gtp[c] + M_h[c] + M[m] an1p[c] --> M_gdpmann[c] + M_ppi[c] genes: LOCUS:PF14_0774# proteins: GENE ASSOCIATION: (PF14_0774)
reactant: 763674
kinetic law: 763735
product: 763723
product: 763711
name: mannose-1-phosphate_guanylyltransferase

310139
units: 756622
value: 0.0
type: LocalParameter

306243
value: 0.0
type: LocalParameter

766789
stoichiometry: 1.0
species: 300911
type: SpeciesReference

777869
stoichiometry: 1.0
species: 300909
type: SpeciesReference

309054
value: 0.0
type: LocalParameter

307014
units: 756574
value: -999999.0
type: LocalParameter

306504
units: 756622
value: 0.0
type: LocalParameter

308619
value: 0.0
type: LocalParameter

MODEL1007060000
species: 301531
reaction: 302401
species: 300492
reaction: 302515
species: 301142
species: 301374
reaction: 303428
reaction: 304217
reaction: 302820
species: 301713
species: 300178
reaction: 304706
reaction: 304409
reaction: 303131
species: 300909
reaction: 304670
species: 300464
species: 300827
reaction: 303944
species: 301495
reaction: 302494
reaction: 303755
reaction: 302897
reaction: 303398
species: 301781
reaction: 302409
reaction: 303833
species: 300242
species: 300050
species: 300713
species: 299988
species: 301392
curated: false
reaction: 302293
reaction: 304736
reaction: 304430
reaction: 304199
reaction: 303275
reaction: 302828
species: 301160
species: 300600
species: 301733
species: 300196
reaction: 302227
species: 300114
species: 300400
reaction: 303515
reaction: 304697
species: 301056
reaction: 303200
reaction: 303629
reaction: 302430
reaction: 303593
compartment: 299929
species: 300262
reaction: 302187
species: 300670
reaction: 301991
reaction: 304574
units def: 756683
reaction: 302935
species: 301697
reaction: 303812
reaction: 302362
reaction: 302065
reaction: 304124
reaction: 302440
species: 301675
species: 300622
species: 301182
reaction: 303344
species: 301076
reaction: 304001
units def: 756659
reaction: 304766
reaction: 304469
reaction: 302123
reaction: 303662
reaction: 303995
reaction: 302632

309789
units: 756574
value: 999999.0
type: LocalParameter

786538
stoichiometry: 1.0
species: 301581
type: SpeciesReference

780373
stoichiometry: 1.0
species: 301701
type: SpeciesReference

307739
units: 756574
value: 999999.0
type: LocalParameter

305183
units: 756574
value: 0.0
type: LocalParameter

788124
stoichiometry: 1.0
species: 301533
type: SpeciesReference

302719
kinetic law: 774850
product: 774838
reactant: 774826
notes: Abbreviation: R_EX_xan_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_xan <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_xan_e_
type: Reaction

794262
stoichiometry: 1.0
species: 301360
type: SpeciesReference

300104
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 3_4_Hydroxyphenyl_pyruvate_C9H7O4
type: Species

309055
units: 756622
value: 0.0
type: LocalParameter

306242
units: 756574
value: 999999.0
type: LocalParameter

301076
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: D_Mannose_1_phosphate_C6H11O9P
type: Species

304721
kinetic law: 816412
product: 816400
reactant: 816388
notes: Abbreviation: R_Q8H2tmt EC Number: SUBSYSTEM: Transport_MT Equation: M_q8h2[m] <==> M_q8h2[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_Q8H2tmt
type: Reaction

798860
stoichiometry: 1.0
species: 301160
type: SpeciesReference

306503
value: 0.0
type: LocalParameter

307015
units: 756574
value: 999999.0
type: LocalParameter

777421
stoichiometry: 1.0
species: 300909
type: SpeciesReference

301936
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Phosphate_HO4P
type: Species

795238
stoichiometry: 1.0
species: 300620
type: SpeciesReference

309910
units: 756574
value: 999999.0
type: LocalParameter

308618
units: 756574
value: 999999.0
type: LocalParameter

302457
kinetic law: 771572
product: 771560
reactant: 771548
notes: Abbreviation: R_EX_co2_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M[c] o2 <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_co2_e_
type: Reaction

305184
units: 756574
value: 999999.0
type: LocalParameter

300925
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Bicarbonate_CHO3
type: Species

303830
reversible: false
fast: false
type: Reaction
product: 801127
reactant: 801115
notes: Abbreviation: R_PDE4 EC Number: 3.1.4.17 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_35cgmp[c] + M_h2o[c] --> M_gmp[c] + M_h[c] genes: LOCUS:MAL13P1_118# LOCUS:MAL13P1_119# LOCUS:PF14_0672# LOCUS:PFL0475w# proteins: GENE ASSOCIATION: (MAL13P1_118) or (MAL13P1_119) or (PF14_0672) or (PFL0475w)
reactant: 801102
name: 3',5'-cyclic-nucleotide_phosphodiesterase
kinetic law: 801151
product: 801139

309344
units: 756574
value: 999999.0
type: LocalParameter

780484
stoichiometry: 1.0
species: 301396
type: SpeciesReference

307628
units: 756622
value: 0.0
type: LocalParameter

309498
units: 756574
value: 999999.0
type: LocalParameter

301368
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphatidylglycerophosphate_dihexadec_9_enoyl_n_C161_C38H69O13P2
type: Species

305294
units: 756622
value: 0.0
type: LocalParameter

309345
value: 0.0
type: LocalParameter

789184
stoichiometry: 1.0
species: 300903
type: SpeciesReference

757970
stoichiometry: 1.0
species: 300911
type: SpeciesReference

306132
units: 756574
value: 999999.0
type: LocalParameter

310023
units: 756622
value: 0.0
type: LocalParameter

797072
stoichiometry: 1.0
species: 300777
type: SpeciesReference

810401
stoichiometry: 1.0
species: 300843
type: SpeciesReference

304616
kinetic law: 815084
product: 815072
reactant: 815060
notes: Abbreviation: R_4MPETZtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_4mpetz[m] <==> M_4mpetz[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_4MPETZtmt
type: Reaction

310584
units: 756622
value: 0.0
type: LocalParameter

302716
kinetic law: 774814
product: 774802
reactant: 774790
notes: Abbreviation: R_EX_val_L_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_val_L <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_val_L_e_
type: Reaction

817621
stoichiometry: 0.0674
species: 300538
type: SpeciesReference

783147
stoichiometry: 1.0
species: 300288
type: SpeciesReference

814828
stoichiometry: 1.0
species: 301394
type: SpeciesReference

767487
stoichiometry: 1.0
species: 301148
type: SpeciesReference

305295
units: 756574
value: 0.0
type: LocalParameter

786428
stoichiometry: 1.0
species: 300536
type: SpeciesReference

307629
units: 756574
value: 0.0
type: LocalParameter

778943
stoichiometry: 1.0
species: 300270
type: SpeciesReference

301214
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: octadecanoate_n_C180_C18H35O2
type: Species

309499
value: 0.0
type: LocalParameter

770580
stoichiometry: 1.0
species: 301186
type: SpeciesReference

797782
stoichiometry: 1.0
species: 301272
type: SpeciesReference

301070
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: Malonyl_CoA_C24H33N7O19P3S
type: Species

808797
stoichiometry: 1.0
species: 301699
type: SpeciesReference

811992
stoichiometry: 1.0
species: 301585
type: SpeciesReference

302025
type: Reaction
reactant: 758225
product: 758264
reversible: true
product: 758277
name: glutamate_dehydrogenase_(NADP+)
reactant: 758213
product: 758238
notes: Abbreviation: R_GLUDy_ap EC Number: 1.4.1.4 SUBSYSTEM: AminoAcids_GluMetabolism ; AminoAcids_NitrogenMetabolism Equation: M_glu_L[ap] + M_h2o[ap] + M_nadp[ap] <==> M_akg[ap] + M_h[ap] + M_nadph[ap] + M_nh4[ap] genes: LOCUS:PF14_0286# proteins: GENE ASSOCIATION: (PF14_0286)
product: 758251
reactant: 758201
fast: false
kinetic law: 758290

777978
stoichiometry: 1.0
species: 300156
type: SpeciesReference

758152
stoichiometry: 1.0
species: 300911
type: SpeciesReference

776387
stoichiometry: 1.0
species: 300656
type: SpeciesReference

310024
units: 756574
value: -999999.0
type: LocalParameter

757216
stoichiometry: 1.0
species: 301438
type: SpeciesReference

777651
stoichiometry: 1.0
species: 301146
type: SpeciesReference

305182
units: 756622
value: 0.0
type: LocalParameter

310585
units: 756574
value: -999999.0
type: LocalParameter

301366
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphatidylglycerophosphate_dihexadecanoyl_n_C160_C38H73O13P2
type: Species

309347
units: 756622
value: 0.0
type: LocalParameter

764605
stoichiometry: 1.0
species: 300522
type: SpeciesReference

766632
stoichiometry: 1.0
species: 301112
type: SpeciesReference

306134
units: 756622
value: 0.0
type: LocalParameter

771256
stoichiometry: 1.0
species: 300348
type: SpeciesReference

304613
kinetic law: 815047
product: 815035
reactant: 815023
notes: Abbreviation: R_4HBZtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_4hbz[m] <==> M_4hbz[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_4HBZtmt
type: Reaction

806021
stoichiometry: 2.0
species: 301196
type: SpeciesReference

310247
value: 0.0
type: LocalParameter

303989
product: 804775
reactant: 804739
notes: Abbreviation: R_CYOR_u6m_mt EC Number: 1.10.2.2 SUBSYSTEM: Others_MitochondrialElectronFlow Equation: (2.0) M_ficytc[m] + M_q8h2[m] --> (2.0) M_focytc[m] + M_q8[m] genes: LOCUS:PF14_0248# LOCUS:PF14_0373# proteins: GENE ASSOCIATION: (PF14_0248) or (PF14_0373)
fast: false
reactant: 804751
reversible: false
name: ubiquinol-cytochrome-c_reductase
type: Reaction
product: 804763
kinetic law: 804787

309348
units: 756574
value: -999999.0
type: LocalParameter

301212
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: octadecanoate_n_C180_C18H35O2
type: Species

777578
stoichiometry: 1.0
species: 301146
type: SpeciesReference

768135
stoichiometry: 1.0
species: 301428
type: SpeciesReference

796940
stoichiometry: 1.0
species: 300386
type: SpeciesReference

303116
type: Reaction
product: 784884
kinetic law: 784908
product: 784896
fast: false
notes: Abbreviation: R_DXPS_ap EC Number: 2.2.1.7 SUBSYSTEM: Lipids_IsoprenoidsMetabolism Equation: M_g3p[ap] + M_h[ap] + M_pyr[ap] --> M[c] o2[ap] + M_dxyl5p[ap] genes: LOCUS:MAL13P1_186# proteins: GENE ASSOCIATION: (MAL13P1_186)
reversible: false
reactant: 784860
reactant: 784872
name: 1-deoxy-D-xylulose-5-phosphate_synthase
reactant: 784848

302023
notes: Abbreviation: R_GLUDy EC Number: 1.4.1.4 SUBSYSTEM: AminoAcids_GluMetabolism ; AminoAcids_NitrogenMetabolism Equation: M_glu_L[c] + M_h2o[c] + M_nadp[c] <==> M_akg[c] + M_h[c] + M_nadph[c] + M_nh4[c] genes: LOCUS:PF14_0164# proteins: GENE ASSOCIATION: (PF14_0164)
reactant: 758104
reactant: 758116
type: Reaction
reversible: true
name: glutamate_dehydrogenase_(NADP+)
product: 758176
product: 758164
product: 758152
reactant: 758128
product: 758140
kinetic law: 758188
fast: false

310249
units: 756622
value: 0.0
type: LocalParameter

306133
value: 0.0
type: LocalParameter

301072
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Maltose_C12H22O11
type: Species

310022
value: 0.0
type: LocalParameter

769926
stoichiometry: 1.0
species: 300364
type: SpeciesReference

814309
stoichiometry: 1.0
species: 301222
type: SpeciesReference

310583
value: 0.0
type: LocalParameter

778171
stoichiometry: 1.0
species: 300512
type: SpeciesReference

305883
units: 756574
value: 999999.0
type: LocalParameter

309349
units: 756574
value: 999999.0
type: LocalParameter

304097
kinetic law: 807042
product: 807029
reactant: 807016
notes: Abbreviation: R_FE2t EC Number: SUBSYSTEM: Transport Equation: M_fe2[e] --> M_fe2[c] genes: LOCUS:PFF0450c# proteins: GENE ASSOCIATION: (PFF0450c)
fast: false
reversible: false
name: R_FE2t
type: Reaction

800763
stoichiometry: 1.0
species: 300608
type: SpeciesReference

302173
reactant: 763505
product: 763517
type: Reaction
notes: Abbreviation: R_GFUCS EC Number: 1.1.1.271 SUBSYSTEM: Carbohydrates_MannoseFructoseMetabolism Equation: M_gdpddman[c] + M_h[c] + M_nadph[c] --> M_gdpfuc[c] + M_nadp[c] genes: LOCUS:PF10_0137# proteins: GENE ASSOCIATION: (PF10_0137)
kinetic law: 763541
reversible: false
product: 763529
fast: false
name: GDP-L-fucose_synthase
reactant: 763481
reactant: 763493

784644
stoichiometry: 1.0
species: 300096
type: SpeciesReference

766243
stoichiometry: 1.0
species: 301605
type: SpeciesReference

766993
stoichiometry: 1.0
species: 300911
type: SpeciesReference

301364
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Phosphatidylglycerophosphate_ditetradec_7_enoyl_n_C141_C34H61O13P2
type: Species

303986
type: Reaction
reversible: false
name: ferredoxin-NADP+_reductase
kinetic law: 804727
notes: Abbreviation: R_FLDR_ap EC Number: 1.18.1.2 SUBSYSTEM: Others_BiosynthesisCytochrome Equation: M_fldox[ap] + M_h[ap] + M_nadph[ap] --> M_fldrd[ap] + M_nadp[ap] genes: LOCUS:PF07_0085# LOCUS:PF11_0407# LOCUS:PFF1115w# proteins: GENE ASSOCIATION: (PF07_0085) or (PF11_0407) or (PFF1115w)
reactant: 804666
product: 804715
reactant: 804678
product: 804703
fast: false
reactant: 804690

768558
stoichiometry: 1.0
species: 300911
type: SpeciesReference

816847
stoichiometry: 1.0
species: 300984
type: SpeciesReference

300676
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: dTMP_C10H13N2O8P
type: Species

809872
stoichiometry: 1.0
species: 300965
type: SpeciesReference

305880
units: 756574
value: 0.0
type: LocalParameter

301930
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Phenylalanine_C9H11NO2
type: Species

766849
stoichiometry: 1.0
species: 300204
type: SpeciesReference

309494
value: 0.0
type: LocalParameter

816992
stoichiometry: 10.0
species: 300398
type: SpeciesReference

309157
units: 756574
value: 999999.0
type: LocalParameter

768485
stoichiometry: 1.0
species: 300903
type: SpeciesReference

760321
stoichiometry: 1.0
species: 300370
type: SpeciesReference

774136
stoichiometry: 1.0
species: 301475
type: SpeciesReference

310580
units: 756574
value: 0.0
type: LocalParameter

802587
stoichiometry: 1.0
species: 300604
type: SpeciesReference

310027
value: 0.0
type: LocalParameter

763001
stoichiometry: 1.0
species: 301142
type: SpeciesReference

805027
stoichiometry: 1.0
species: 301132
type: SpeciesReference

310029
units: 756622
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790887
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species: 301214
type: SpeciesReference

303344
reversible: false
kinetic law: 790391
fast: false
notes: Abbreviation: R_LPLIPAL2A180 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2odecg3p[c] + M_h2o[c] --> M_glyc3p[c] + (2.0) M_h[c] + M_ocdca[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
product: 790367
product: 790355
product: 790379
reactant: 790343
reactant: 790331
name: lysophospholipase
type: Reaction

809728
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species: 300913
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810738
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species: 300913
type: SpeciesReference

309495
units: 756622
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808905
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species: 300821
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793332
stoichiometry: 1.0
species: 300911
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766098
stoichiometry: 1.0
species: 301416
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816241
stoichiometry: 1.0
species: 301382
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302021
notes: Abbreviation: R_GLUDxi EC Number: 1.4.1.2 SUBSYSTEM: AminoAcids_GluMetabolism ; AminoAcids_NitrogenMetabolism Equation: M_glu_L[c] + M_h2o[c] + M_nad[c] --> M_akg[c] + M_h[c] + M_nadh[c] + M_nh4[c] genes: LOCUS:PF08_0132# proteins: GENE ASSOCIATION: (PF08_0132)
type: Reaction
product: 758068
fast: false
reactant: 758006
reactant: 758031
reactant: 758019
name: glutamate_dehydrogenase
product: 758056
reversible: false
product: 758044
product: 758080
kinetic law: 758092

300678
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boundary condition: false
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initial concentration: NaN
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name: dTTP_C10H13N2O14P3
type: Species

305299
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310581
units: 756574
value: 999999.0
type: LocalParameter

818140
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species: 301390
type: SpeciesReference

302713
kinetic law: 774778
product: 774766
reactant: 774754
notes: Abbreviation: R_EX_uri_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_uri <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_uri_e_
type: Reaction

792217
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species: 300903
type: SpeciesReference

791503
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species: 301290
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799124
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309158
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304619
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product: 815108
reactant: 815096
notes: Abbreviation: R_4MOPtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_4mop[m] <==> M_4mop[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_4MOPtmt
type: Reaction

303119
name: 4-hydroxy-3-methylbut-2-enyl_diphosphate_reductase
reactant: 784944
reactant: 784920
kinetic law: 784995
product: 784982
fast: false
product: 784956
product: 784969
reversible: false
reactant: 784932
type: Reaction
notes: Abbreviation: R_IPDPS_ap EC Number: 1.17.1.2 SUBSYSTEM: Lipids_IsoprenoidsMetabolism Equation: M_h[ap] + M_h2mb4p[ap] + M_nadph[ap] --> M_h2o[ap] + M_ipdp[ap] + M_nadp[ap] genes: LOCUS:PFA0225w# proteins: GENE ASSOCIATION: (PFA0225w)

306130
units: 756574
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769612
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308611
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301362
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boundary condition: false
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initial concentration: NaN
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name: Phosphatidylglycerophosphate_ditetradecanoyl_n_C140_C34H65O13P2
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816096
stoichiometry: 1.0
species: 301190
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302171
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reactant: 763409
fast: false
reactant: 763421
type: Reaction
name: pyruvate_kinase
product: 763457
kinetic law: 763469
reversible: false
product: 763445
reactant: 763433

305296
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770361
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309496
units: 756574
value: -999999.0
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303341
reactant: 790271
reversible: false
product: 790295
type: Reaction
fast: false
notes: Abbreviation: R_LPLIPAL2A161 EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_2hdec9eg3p[c] + M_h2o[c] --> M_glyc3p[c] + (2.0) M_h[c] + M_hdcea[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
name: lysophospholipase
product: 790283
product: 790307
reactant: 790259
kinetic law: 790319

759645
stoichiometry: 1.0
species: 300903
type: SpeciesReference

301218
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: octadecenoate_n_C181_C18H33O2
type: Species

773587
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species: 301182
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803105
stoichiometry: 1.0
species: 301390
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306962
units: 756574
value: -999999.0
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764943
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species: 300879
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310368
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795069
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species: 301390
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794564
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species: 301364
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309155
units: 756574
value: 0.0
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807647
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species: 301032
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308610
units: 756622
value: 0.0
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304094
product: 806990
reactant: 806964
product: 806977
reactant: 806951
kinetic law: 807003
fast: false
type: Reaction
reversible: false
notes: Abbreviation: R_F6Pt6_2pp EC Number: SUBSYSTEM: Transport Equation: (2.0) M_pi[c] + M_f6p[e] --> M_f6p[c] + (2.0) M_pi[e] genes: proteins: GENE ASSOCIATION:
name: R_F6Pt6_2pp

756586
exponent: 1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

766423
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species: 300885
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776058
stoichiometry: 1.0
species: 300558
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800522
stoichiometry: 1.0
species: 300550
type: SpeciesReference

301216
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: octadecanoate_n_C180_C18H35O2
type: Species

303983
fast: false
name: pseudouridylate_synthase
reactant: 804605
type: Reaction
product: 804641
kinetic law: 804654
reversible: true
product: 804629
reactant: 804617
notes: Abbreviation: R_YUMPS EC Number: 4.2.1.70 SUBSYSTEM: Nucleotides_PyrimidineMetabolism Equation: M_r5p[c] + M_ura[c] <==> M_h2o[c] + M_psd5p[c] genes: LOCUS:PF10_0175# LOCUS:PFB0890c# LOCUS:PFE1080w# LOCUS:PFI0420c# LOCUS:PFI0685w# LOCUS:PFL1350w# proteins: GENE ASSOCIATION: (PF10_0175) or (PFB0890c) or (PFE1080w) or (PFI0420c) or (PFI0685w) or (PFL1350w)

302710
kinetic law: 774742
product: 774730
reactant: 774717
notes: Abbreviation: R_EX_urea_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_urea <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_urea_e_
type: Reaction

774244
stoichiometry: 1.0
species: 301525
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810521
stoichiometry: 1.0
species: 300821
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804202
stoichiometry: 1.0
species: 300923
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785738
stoichiometry: 1.0
species: 300911
type: SpeciesReference

310026
units: 756574
value: 999999.0
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306961
units: 756622
value: 0.0
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790223
stoichiometry: 2.0
species: 300911
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791808
stoichiometry: 1.0
species: 300008
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787785
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species: 300773
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805985
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786670
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810497
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species: 300819
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808651
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species: 301545
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309014
units: 756574
value: 999999.0
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310166
units: 756622
value: 0.0
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784788
stoichiometry: 1.0
species: 300909
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759330
stoichiometry: 1.0
species: 300524
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794104
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species: 300460
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758618
stoichiometry: 1.0
species: 301416
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766692
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species: 300340
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305131
value: 0.0
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306215
units: 756574
value: 0.0
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770253
stoichiometry: 1.0
species: 300086
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307731
units: 756622
value: 0.0
type: LocalParameter

301517
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: D_Ribulose_5_phosphate_C5H9O8P
type: Species

773128
stoichiometry: 1.0
species: 301886
type: SpeciesReference

307268
units: 756574
value: 0.0
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308764
units: 756622
value: 0.0
type: LocalParameter

306568
value: 0.0
type: LocalParameter

775792
stoichiometry: 1.0
species: 300596
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776216
stoichiometry: 1.0
species: 300454
type: SpeciesReference

309015
value: 0.0
type: LocalParameter

310167
units: 756574
value: -999999.0
type: LocalParameter

806177
stoichiometry: 1.0
species: 301148
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757688
stoichiometry: 2.0
species: 300829
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796613
stoichiometry: 1.0
species: 300030
type: SpeciesReference

300578
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: N6_1_2_Dicarboxyethyl_AMP_C14H14N5O11P
type: Species

772029
stoichiometry: 1.0
species: 301826
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773406
stoichiometry: 1.0
species: 301082
type: SpeciesReference

303680
product: 798049
reversible: false
reactant: 798013
notes: Abbreviation: R_PAPA161pp EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa161[c] --> M_12dgr161[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)
fast: false
reactant: 798025
kinetic law: 798061
product: 798037
name: phosphatidate_phosphatase
type: Reaction

306214
units: 756622
value: 0.0
type: LocalParameter

307732
units: 756574
value: 0.0
type: LocalParameter

307386
units: 756622
value: 0.0
type: LocalParameter

798630
stoichiometry: 1.0
species: 300342
type: SpeciesReference

303458
kinetic law: 793151
notes: Abbreviation: R_CLPNH120pp EC Number: SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M[c] lpn120[c] + M_h2o[c] --> M_h[c] + M_pa120[c] + M_pg120[c] genes: proteins: GENE ASSOCIATION:
reactant: 793099
product: 793112
product: 793125
reactant: 793086
type: Reaction
fast: false
reversible: false
product: 793138
name: R_CLPNH120pp

309770
units: 756622
value: 0.0
type: LocalParameter

307269
units: 756574
value: 999999.0
type: LocalParameter

306567
units: 756574
value: 999999.0
type: LocalParameter

778147
stoichiometry: 1.0
species: 300158
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814756
stoichiometry: 1.0
species: 300334
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790139
stoichiometry: 1.0
species: 300851
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801259
stoichiometry: 2.0
species: 301390
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774063
stoichiometry: 1.0
species: 301404
type: SpeciesReference

306879
units: 756622
value: 0.0
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759489
stoichiometry: 1.0
species: 300346
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810473
stoichiometry: 1.0
species: 301533
type: SpeciesReference

817500
stoichiometry: 2.23E-4
species: 299936
type: SpeciesReference

305060
units: 756574
value: 999999.0
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303683
product: 798099
name: phosphatidate_phosphatase
kinetic law: 798123
type: Reaction
reactant: 798074
reactant: 798086
product: 798111
reversible: false
fast: false
notes: Abbreviation: R_PAPA180 EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa180[c] --> M_12dgr180[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)

783269
stoichiometry: 1.0
species: 300522
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817380
stoichiometry: 1.0
species: 300697
type: SpeciesReference

308762
value: 0.0
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309771
units: 756574
value: -999999.0
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307387
units: 756574
value: 0.0
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306213
value: 0.0
type: LocalParameter

301519
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Sedoheptulose_7_phosphate_C7H13O10P
type: Species

797367
stoichiometry: 1.0
species: 300386
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813543
stoichiometry: 1.0
species: 300913
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307150
units: 756622
value: 0.0
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798968
stoichiometry: 1.0
species: 300332
type: SpeciesReference

304949
value: 0.0
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310169
units: 756574
value: 999999.0
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309017
units: 756622
value: 0.0
type: LocalParameter

310440
value: 0.0
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307509
units: 756574
value: 0.0
type: LocalParameter

798533
stoichiometry: 1.0
species: 300424
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761046
stoichiometry: 1.0
species: 301681
type: SpeciesReference

300576
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initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Decanoyl_CoA_n_C100CoA_C31H50N7O17P3S
type: Species

772175
stoichiometry: 1.0
species: 301834
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305134
units: 756622
value: 0.0
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784560
stoichiometry: 0.01
species: 301464
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307508
units: 756622
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771981
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species: 300709
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789062
stoichiometry: 1.0
species: 300911
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302291
fast: false
reactant: 767475
product: 767511
name: NAD(P)+_transhydrogenase_(AB-specific)
type: Reaction
notes: Abbreviation: R_NADTRHD EC Number: 1.6.1.2 SUBSYSTEM: Cofactors_NicotinateNicotinamideMetabolism Equation: M_nad[c] + M_nadph[c] --> M_nadh[c] + M_nadp[c] genes: LOCUS:PF14_0508# proteins: GENE ASSOCIATION: (PF14_0508)
reversible: false
reactant: 767487
kinetic law: 767523
product: 767499

774934
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species: 301464
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306569
units: 756622
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307388
units: 756574
value: 999999.0
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791370
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307730
value: 0.0
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308761
units: 756574
value: 999999.0
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306212
units: 756574
value: 999999.0
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759766
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species: 301046
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759065
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species: 301416
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804287
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757132
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780520
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816400
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782600
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815277
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307151
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307264
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309010
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308530
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307389
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309773
units: 756574
value: 999999.0
type: LocalParameter

303455
notes: Abbreviation: R_PLIPA2G181pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pg181[c] --> M_1agpg181[c] + M_h[c] + M_ocdcea[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
product: 793037
name: phospholipase_A2
product: 793049
reactant: 793013
reactant: 793025
type: Reaction
product: 793061
reversible: false
fast: false
kinetic law: 793073

779537
stoichiometry: 1.0
species: 301575
type: SpeciesReference

308768
value: 0.0
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305135
units: 756574
value: 0.0
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307735
value: 0.0
type: LocalParameter

790403
stoichiometry: 1.0
species: 300080
type: SpeciesReference

815891
stoichiometry: 1.0
species: 300911
type: SpeciesReference

300574
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name: Decanoyl_CoA_n_C100CoA_C31H50N7O17P3S
type: Species

301511
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initial concentration: NaN
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name: alpha_D_Ribose_5_phosphate_C5H9O8P
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789365
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species: 301214
type: SpeciesReference

300378
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boundary condition: false
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initial amount: NaN
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name: acyl_phosphatidylglycerol_n_C140_C48H92O11P
type: Species

309011
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value: 0.0
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758388
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species: 300829
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306210
units: 756574
value: 0.0
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807768
stoichiometry: 1.0
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305136
units: 756574
value: 999999.0
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307265
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309774
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307152
units: 756574
value: 999999.0
type: LocalParameter

302293
kinetic law: 767607
notes: Abbreviation: R_ALAS_mt EC Number: 2.3.1.37 SUBSYSTEM: AminoAcids_GlySerMetabolism ; Cofactors_PorphyrinMetabolism Equation: M_gly[m] + M_h[m] + M_succoa[m] --> M_5aop[m] + M[c] o2[m] + M[c] oa[m] genes: LOCUS:PFL2210w# proteins: GENE ASSOCIATION: (PFL2210w)
fast: false
reactant: 767547
name: 5-aminolevulinate_synthase
product: 767595
product: 767583
type: Reaction
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reversible: false
reactant: 767559
product: 767571

769685
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species: 300911
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300921
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name: Bicarbonate_CHO3
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771304
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300797
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name: lycocholate_C26H43NO6
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817295
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309012
units: 756574
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766207
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species: 300911
type: SpeciesReference

301515
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: Riboflavin_C17H20N4O6
type: Species

307153
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772273
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species: 300785
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308766
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value: 999999.0
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768412
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species: 300909
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300572
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name: Decanoyl_CoA_n_C100CoA_C31H50N7O17P3S
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816205
stoichiometry: 1.0
species: 301256
type: SpeciesReference

785292
stoichiometry: 1.0
species: 300911
type: SpeciesReference

301513
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Riboflavin_C17H20N4O6
type: Species

308765
units: 756574
value: 0.0
type: LocalParameter

307267
units: 756622
value: 0.0
type: LocalParameter

309776
units: 756622
value: 0.0
type: LocalParameter

809607
stoichiometry: 1.0
species: 301533
type: SpeciesReference

799919
stoichiometry: 1.0
species: 300686
type: SpeciesReference

307734
units: 756574
value: 999999.0
type: LocalParameter

302295
product: 767655
notes: Abbreviation: R_CPPPGO EC Number: 1.3.3.3 SUBSYSTEM: Cofactors_PorphyrinMetabolism Equation: M[c] pppg3[c] + (2.0) M_h[c] + M_o2[c] --> (2.0) M[c] o2[c] + (2.0) M_h2o[c] + M_pppg9[c] genes: LOCUS:PF11_0436# proteins: GENE ASSOCIATION: (PF11_0436)
name: coproporphyrinogen_oxidase
reversible: false
type: Reaction
reactant: 767619
product: 767679
product: 767667
fast: false
reactant: 767631
kinetic law: 767691
reactant: 767643

300923
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Bicarbonate_CHO3
type: Species

304337
kinetic law: 811102
product: 811090
reactant: 811078
notes: Abbreviation: R_PA140tap EC Number: SUBSYSTEM: Transport_AP Equation: M_pa140[ap] <==> M_pa140[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PA140tap
type: Reaction

779476
stoichiometry: 1.0
species: 301122
type: SpeciesReference

300799
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: lycocholate_C26H43NO6
type: Species

305066
units: 756622
value: 0.0
type: LocalParameter

804130
stoichiometry: 1.0
species: 300911
type: SpeciesReference

308067
units: 756574
value: 0.0
type: LocalParameter

306560
units: 756574
value: -999999.0
type: LocalParameter

812598
stoichiometry: 1.0
species: 301342
type: SpeciesReference

777012
stoichiometry: 1.0
species: 300132
type: SpeciesReference

779320
stoichiometry: 1.0
species: 301591
type: SpeciesReference

305139
value: 0.0
type: LocalParameter

307155
units: 756622
value: 0.0
type: LocalParameter

309171
units: 756622
value: 0.0
type: LocalParameter

764220
stoichiometry: 1.0
species: 300911
type: SpeciesReference

773991
stoichiometry: 1.0
species: 301302
type: SpeciesReference

306415
units: 756574
value: -999999.0
type: LocalParameter

757241
stoichiometry: 1.0
species: 301434
type: SpeciesReference

789475
stoichiometry: 1.0
species: 300903
type: SpeciesReference

794310
stoichiometry: 1.0
species: 300903
type: SpeciesReference

308390
units: 756622
value: 0.0
type: LocalParameter

810909
stoichiometry: 1.0
species: 301142
type: SpeciesReference

300220
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: 4_Hydroxy_benzyl_alcohol_C7H8O2
type: Species

810750
stoichiometry: 1.0
species: 301709
type: SpeciesReference

307260
units: 756622
value: 0.0
type: LocalParameter

775129
stoichiometry: 1.0
species: 301214
type: SpeciesReference

310598
units: 756574
value: 999999.0
type: LocalParameter

305067
units: 756574
value: 0.0
type: LocalParameter

308066
units: 756622
value: 0.0
type: LocalParameter

302297
reactant: 767727
fast: false
type: Reaction
kinetic law: 767775
product: 767763
product: 767751
notes: Abbreviation: R_CPPPGO_ap EC Number: 1.3.3.3 SUBSYSTEM: Cofactors_PorphyrinMetabolism Equation: M[c] pppg3[ap] + (2.0) M_h[ap] + M_o2[ap] --> (2.0) M[c] o2[ap] + (2.0) M_h2o[ap] + M_pppg9[ap] genes: LOCUS:PF11_0436# proteins: GENE ASSOCIATION: (PF11_0436)
reactant: 767703
reversible: false
product: 767739
name: coproporphyrinogen_oxidase
reactant: 767715

307156
units: 756574
value: 0.0
type: LocalParameter

309883
units: 756574
value: 999999.0
type: LocalParameter

306414
units: 756622
value: 0.0
type: LocalParameter

301669
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: tRNA_Met_R
type: Species

306628
value: 0.0
type: LocalParameter

303563
reactant: 795468
reversible: false
reactant: 795456
reactant: 795444
product: 795492
type: Reaction
name: UTP-glucose-1-phosphate_uridylyltransferase
product: 795480
kinetic law: 795504
fast: false
notes: Abbreviation: R_GALUi EC Number: 2.7.7.9 SUBSYSTEM: Lipids_SphingomyelinCeramideMetabolism Equation: M_g1p[c] + M_h[c] + M_utp[c] --> M_ppi[c] + M_udpg[c] genes: LOCUS:MAL13P1_218# proteins: GENE ASSOCIATION: (MAL13P1_218)

804034
stoichiometry: 1.0
species: 300903
type: SpeciesReference

309172
units: 756574
value: -999999.0
type: LocalParameter

306629
units: 756622
value: 0.0
type: LocalParameter

300570
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Decanoate_n_C100_C10H19O2
type: Species

300374
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
type: Species

790512
stoichiometry: 1.0
species: 300775
type: SpeciesReference

791759
stoichiometry: 1.0
species: 301703
type: SpeciesReference

770446
stoichiometry: 1.0
species: 301186
type: SpeciesReference

310599
value: 0.0
type: LocalParameter

300160
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

800993
stoichiometry: 1.0
species: 300903
type: SpeciesReference

772382
stoichiometry: 1.0
species: 300815
type: SpeciesReference

306562
units: 756574
value: 999999.0
type: LocalParameter

309173
units: 756574
value: 999999.0
type: LocalParameter

303566
name: serine_C-palmitoyltransferase
type: Reaction
fast: false
reactant: 795540
reactant: 795528
reactant: 795516
notes: Abbreviation: R_SERPT EC Number: 2.3.1.50 SUBSYSTEM: Lipids_SphingomyelinCeramideMetabolism Equation: M_h[c] + M_pmtcoa[c] + M_ser_L[c] --> M_3dsphgn[c] + M[c] o2[c] + M[c] oa[c] genes: LOCUS:PF14_0155# proteins: GENE ASSOCIATION: (PF14_0155)
product: 795564
kinetic law: 795589
reversible: false
product: 795552
product: 795577

307157
units: 756574
value: 999999.0
type: LocalParameter

306417
units: 756574
value: 999999.0
type: LocalParameter

800836
stoichiometry: 1.0
species: 301390
type: SpeciesReference

307262
units: 756574
value: 0.0
type: LocalParameter

789328
stoichiometry: 1.0
species: 300903
type: SpeciesReference

303113
reactant: 784776
product: 784812
reactant: 784788
product: 784824
reactant: 784800
fast: false
type: Reaction
kinetic law: 784836
reversible: false
notes: Abbreviation: R_DXPRIi_ap EC Number: 1.1.1.267 SUBSYSTEM: Lipids_IsoprenoidsMetabolism Equation: M_dxyl5p[ap] + M_h[ap] + M_nadph[ap] --> M_2me4p[ap] + M_nadp[ap] genes: LOCUS:PF14_0641# proteins: GENE ASSOCIATION: (PF14_0641)
name: 1-deoxy-D-xylulose-5-phosphate_reductoisomerase

309884
value: 0.0
type: LocalParameter

809329
stoichiometry: 1.0
species: 300911
type: SpeciesReference

300222
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 4_Hydroxybenzoate_C7H5O3
type: Species

768304
stoichiometry: 3.0
species: 300761
type: SpeciesReference

803527
stoichiometry: 1.0
species: 300903
type: SpeciesReference

771413
stoichiometry: 1.0
species: 301791
type: SpeciesReference

780106
stoichiometry: 1.0
species: 300520
type: SpeciesReference

799040
stoichiometry: 1.0
species: 301160
type: SpeciesReference

769987
stoichiometry: 1.0
species: 300086
type: SpeciesReference

308068
units: 756574
value: 999999.0
type: LocalParameter

308769
units: 756622
value: 0.0
type: LocalParameter

307158
value: 0.0
type: LocalParameter

302299
name: coproporphyrinogen_oxidase
notes: Abbreviation: R_CPPPGO_mt EC Number: 1.3.3.3 SUBSYSTEM: Cofactors_PorphyrinMetabolism Equation: M[c] pppg3[m] + (2.0) M_h[m] + M_o2[m] --> (2.0) M[c] o2[m] + (2.0) M_h2o[m] + M_pppg9[m] genes: LOCUS:PF11_0436# proteins: GENE ASSOCIATION: (PF11_0436)
product: 767827
reactant: 767801
kinetic law: 767866
type: Reaction
reversible: false
reactant: 767814
reactant: 767788
product: 767840
product: 767853
fast: false

300376
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: acyl_phosphatidylglycerol_n_C120_C42H80O11P
type: Species

817187
stoichiometry: 31.0
species: 301743
type: SpeciesReference

788099
stoichiometry: 1.0
species: 300851
type: SpeciesReference

308391
units: 756574
value: 0.0
type: LocalParameter

301880
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Hypoxanthine_C5H4N4O
type: Species

802732
stoichiometry: 1.0
species: 300682
type: SpeciesReference

300162
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

310161
units: 756622
value: 0.0
type: LocalParameter

782917
stoichiometry: 1.0
species: 300122
type: SpeciesReference

781080
stoichiometry: 3.0
species: 300909
type: SpeciesReference

310018
units: 756622
value: 0.0
type: LocalParameter

765461
stoichiometry: 1.0
species: 301128
type: SpeciesReference

306625
units: 756574
value: -999999.0
type: LocalParameter

309175
value: 0.0
type: LocalParameter

306564
units: 756622
value: 0.0
type: LocalParameter

306219
units: 756622
value: 0.0
type: LocalParameter

778255
stoichiometry: 1.0
species: 300512
type: SpeciesReference

784896
stoichiometry: 1.0
species: 300692
type: SpeciesReference

305288
units: 756574
value: 999999.0
type: LocalParameter

793260
stoichiometry: 1.0
species: 300911
type: SpeciesReference

310162
units: 756574
value: 0.0
type: LocalParameter

788268
stoichiometry: 1.0
species: 300911
type: SpeciesReference

775684
stoichiometry: 1.0
species: 301310
type: SpeciesReference

300224
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: 4_Hydroxybenzoate_C7H5O3
type: Species

792747
stoichiometry: 1.0
species: 299988
type: SpeciesReference

770724
stoichiometry: 1.0
species: 300414
type: SpeciesReference

309018
units: 756574
value: -999999.0
type: LocalParameter

757578
stoichiometry: 1.0
species: 301655
type: SpeciesReference

307381
units: 756622
value: 0.0
type: LocalParameter

768859
stoichiometry: 1.0
species: 301390
type: SpeciesReference

306624
units: 756622
value: 0.0
type: LocalParameter

310019
units: 756574
value: -999999.0
type: LocalParameter

776082
stoichiometry: 1.0
species: 299944
type: SpeciesReference

307942
units: 756574
value: 999999.0
type: LocalParameter

306410
units: 756574
value: -999999.0
type: LocalParameter

306563
value: 0.0
type: LocalParameter

304781
kinetic law: 817488
product: 817476
reactant: 817464
notes: Abbreviation: R_ACCOAtm EC Number: SUBSYSTEM: Transport_MT Equation: M_accoa[c] <==> M_accoa[m] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_ACCOAtm
type: Reaction

805441
stoichiometry: 1.0
species: 300887
type: SpeciesReference

306218
value: 0.0
type: LocalParameter

758509
stoichiometry: 1.0
species: 301114
type: SpeciesReference

305063
value: 0.0
type: LocalParameter

782056
stoichiometry: 1.0
species: 300020
type: SpeciesReference

770145
stoichiometry: 1.0
species: 301132
type: SpeciesReference

796504
stoichiometry: 2.0
species: 300903
type: SpeciesReference

300370
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: AMP_C10H12N5O7P
type: Species

784932
stoichiometry: 1.0
species: 300893
type: SpeciesReference

306989
value: 0.0
type: LocalParameter

794214
stoichiometry: 1.0
species: 300911
type: SpeciesReference

309019
units: 756574
value: 999999.0
type: LocalParameter

787012
stoichiometry: 1.0
species: 300911
type: SpeciesReference

301882
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Isoleucine_C6H13NO2
type: Species

309176
units: 756622
value: 0.0
type: LocalParameter

310163
units: 756574
value: 999999.0
type: LocalParameter

307382
units: 756574
value: 0.0
type: LocalParameter

786015
stoichiometry: 1.0
species: 301264
type: SpeciesReference

309880
units: 756622
value: 0.0
type: LocalParameter

306627
units: 756574
value: 999999.0
type: LocalParameter

306413
value: 0.0
type: LocalParameter

800571
stoichiometry: 1.0
species: 300903
type: SpeciesReference

767161
stoichiometry: 1.0
species: 300903
type: SpeciesReference

304784
reactant: 817875
reactant: 817779
reactant: 818019
reactant: 818104
reactant: 818043
product: 818128
reactant: 817863
reactant: 817694
reactant: 817959
fast: false
reactant: 818031
reactant: 817597
reactant: 817755
reactant: 817645
reactant: 817670
reactant: 817935
product: 818116
reactant: 817560
kinetic law: 818164
reactant: 817536
name: R_biomass
reactant: 817839
reactant: 817512
reactant: 817791
reactant: 817995
reversible: false
reactant: 818007
reactant: 817827
reactant: 817971
reactant: 817851
reactant: 817767
notes: Abbreviation: R_biomass EC Number: SUBSYSTEM: Equation: (2.23E-4) M_10fthf[c] + (2.23E-4) M_2ohph[m] + (0.1364) M_ala_L[c] + (2.23E-4) M_amet[c] + (0.1349) M_arg_L[c] + (0.6245) M_asn_L[c] + (0.2994) M_asp_L[c] + (60.01) M_atp[c] + (5.76E-4) M[c] oa[c] + (0.0437) M[c] tp[c] + (0.0674) M[c] ys_L[c] + (0.02721) M_datp[c] + (0.00655) M_dctp[c] + (0.00655) M_dgtp[c] + (0.02721) M_dttp[c] + (2.23E-4) M_fad[c] + (0.007106) M_fe2[c] + (0.007106) M_fe3[c] + (0.1353) M_gln_L[c] + (0.3505) M_glu_L[c] + (0.1827) M_gly[c] + (0.06241) M_gtp[c] + (54.462) M_h2o[c] + (0.1063) M_his_L[c] + (0.3566) M_ile_L[c] + (0.3405) M_leu_L[c] + (0.5124) M_lys_L[c] + (0.1019) M[m] et_L[c] + (2.23E-4) M[m] lthf[c] + (0.001831) M_nad[c] + (4.47E-4) M_nadp[c] + (0.011843) M_nh4[c] + (0.12342) M_pe[c] + (0.1481) M_pc[c] + (0.0519) M[c] hsterol[e] + (0.1823) M_phe_L[c] + (2.23E-4) M_pheme[m] + (0.1085) M_pro_L[c] + (2.23E-4) M_pydx5p[c] + (2.23E-4) M_ribflv[c] + (0.3055) M_ser_L[c] + (0.003948) M_so4[c] + (2.23E-4) M_thf[c] + (2.23E-4) M_thmpp[c] + (0.2045) M_thr_L[c] + (0.02095) M_trp_L[c] + (0.1379) M_tyr_L[c] + (0.2219) M_utp[c] + (0.2030) M_val_L[c] + (0.0479) M_ptrc[c] + (0.00959) M_spmd[c] --> (59.81) M_adp[c] + (59.81) M_h[c] + (59.806) M_pi[c] + (0.7739) M_ppi[c] genes: proteins: GENE ASSOCIATION:
reactant: 817657
reactant: 817682
reactant: 817500
reactant: 817947
reactant: 817803
reactant: 817572
reactant: 817719
reactant: 817609
reactant: 817585
reactant: 817743
reactant: 818079
reactant: 817633
reactant: 817923
reactant: 817887
product: 818140
reactant: 817731
product: 818152
reactant: 817621
reactant: 818055
reactant: 817983
reactant: 817815
type: Reaction
reactant: 817548
reactant: 817899
reactant: 817911
reactant: 817707
reactant: 817524
reactant: 818092
reactant: 818067

307383
units: 756574
value: 999999.0
type: LocalParameter

783378
stoichiometry: 1.0
species: 300166
type: SpeciesReference

306217
units: 756574
value: 999999.0
type: LocalParameter

790814
stoichiometry: 1.0
species: 300939
type: SpeciesReference

807999
stoichiometry: 1.0
species: 301174
type: SpeciesReference

306988
units: 756574
value: 999999.0
type: LocalParameter

774172
stoichiometry: 1.0
species: 301944
type: SpeciesReference

787530
stoichiometry: 1.0
species: 300911
type: SpeciesReference

814647
stoichiometry: 1.0
species: 300618
type: SpeciesReference

309177
units: 756574
value: -999999.0
type: LocalParameter

801368
stoichiometry: 1.0
species: 301390
type: SpeciesReference

300226
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 4_Methyl_5_2_hydroxyethyl_thiazole_C6H9NOS
type: Species

808543
stoichiometry: 2.0
species: 300925
type: SpeciesReference

784211
stoichiometry: 1.0
species: 301390
type: SpeciesReference

777749
stoichiometry: 1.0
species: 301140
type: SpeciesReference

306412
units: 756574
value: 999999.0
type: LocalParameter

795806
stoichiometry: 1.0
species: 300642
type: SpeciesReference

300228
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: 4_Methyl_5_2_hydroxyethyl_thiazole_C6H9NOS
type: Species

309881
units: 756574
value: -999999.0
type: LocalParameter

765869
stoichiometry: 1.0
species: 300911
type: SpeciesReference

303569
product: 795650
reversible: false
reactant: 795601
fast: false
type: Reaction
name: sphingomyelin_phosphodiesterase
kinetic law: 795662
product: 795625
notes: Abbreviation: R_SMPD3l EC Number: 3.1.4.12 SUBSYSTEM: Lipids_SphingomyelinCeramideMetabolism Equation: M_h2o[c] + M_sphmyln[c] --> M[c] holp[c] + M[c] rm[c] + M_h[c] genes: LOCUS:PFL1870c# proteins: GENE ASSOCIATION: (PFL1870c)
reactant: 795613
product: 795637

307384
value: 0.0
type: LocalParameter

303110
type: Reaction
product: 784728
reversible: false
kinetic law: 784764
product: 784740
notes: Abbreviation: R_DMPPS_ap EC Number: 1.17.1.2 SUBSYSTEM: Lipids_IsoprenoidsMetabolism Equation: M_h[ap] + M_h2mb4p[ap] + M_nadph[ap] --> M_dmpp[ap] + M_h2o[ap] + M_nadp[ap] genes: LOCUS:PFA0225w# proteins: GENE ASSOCIATION: (PFA0225w)
reactant: 784692
name: 4-hydroxy-3-methylbut-2-enyl_diphosphate_reductase
reactant: 784704
product: 784752
reactant: 784716
fast: false

303791
reversible: false
notes: Abbreviation: R_NTD5 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_dtmp[c] + M_h2o[c] --> M_pi[c] + M_thymd[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
product: 800353
type: Reaction
reactant: 800329
reactant: 800317
fast: false
product: 800341
name: 5'-nucleotidase
kinetic law: 800365

782311
stoichiometry: 1.0
species: 300270
type: SpeciesReference

307940
units: 756574
value: 0.0
type: LocalParameter

306565
units: 756574
value: -999999.0
type: LocalParameter

761155
stoichiometry: 1.0
species: 300829
type: SpeciesReference

306987
units: 756574
value: 0.0
type: LocalParameter

786392
stoichiometry: 1.0
species: 300460
type: SpeciesReference

300372
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Anthranilate_C7H6NO2
type: Species

773334
stoichiometry: 1.0
species: 301066
type: SpeciesReference

788376
stoichiometry: 1.0
species: 300903
type: SpeciesReference

782746
stoichiometry: 1.0
species: 301635
type: SpeciesReference

301884
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
type: Species

310165
value: 0.0
type: LocalParameter

310591
units: 756574
value: -999999.0
type: LocalParameter

301886
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: myo_Inositol_C6H12O6
type: Species

790259
stoichiometry: 1.0
species: 300068
type: SpeciesReference

304082
kinetic law: 806781
product: 806769
type: Reaction
reactant: 806733
reactant: 806745
notes: Abbreviation: R_CITt2r EC Number: SUBSYSTEM: Transport Equation: M[c] it[e] + M_h[e] <==> M[c] it[c] + M_h[c] genes: proteins: GENE ASSOCIATION:
reversible: true
name: R_CITt2r
fast: false
product: 806757

300156
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

785726
stoichiometry: 1.0
species: 300332
type: SpeciesReference

309168
units: 756574
value: 999999.0
type: LocalParameter

807164
stoichiometry: 1.0
species: 300911
type: SpeciesReference

763260
stoichiometry: 1.0
species: 300414
type: SpeciesReference

771632
stoichiometry: 1.0
species: 301803
type: SpeciesReference

306997
units: 756574
value: 0.0
type: LocalParameter

795202
stoichiometry: 1.0
species: 301142
type: SpeciesReference

308070
value: 0.0
type: LocalParameter

308989
units: 756622
value: 0.0
type: LocalParameter

303995
product: 804907
reactant: 804871
name: succinate_dehydrogenase_(ubiquinone)
notes: Abbreviation: R_SUCD2_u6m_mt EC Number: 1.3.5.1 SUBSYSTEM: Others_MitochondrialElectronFlow Equation: M_q8[m] + M_succ[m] <==> M_fum[m] + M_q8h2[m] genes: LOCUS:PF10_0334# proteins: GENE ASSOCIATION: (PF10_0334)
reversible: true
reactant: 804883
fast: false
type: Reaction
kinetic law: 804919
product: 804895

779103
stoichiometry: 1.0
species: 300014
type: SpeciesReference

302079
product: 760333
reactant: 760309
notes: Abbreviation: R_METTRS EC Number: 6.1.1.10 SUBSYSTEM: AminoAcids_MetPolyamineMetabolism Equation: M_atp[c] + M[m] et_L[c] + M_trnamet[c] --> M_amp[c] + M[m] ettrna[c] + M_ppi[c] genes: LOCUS:PF10_0053# LOCUS:PF10_0340# LOCUS:PF14_0401# proteins: GENE ASSOCIATION: (PF10_0053) or (PF10_0340) or (PF14_0401)
reversible: false
kinetic law: 760357
product: 760321
type: Reaction
reactant: 760297
name: Methionine-tRNA_ligase
reactant: 760285
fast: false
product: 760345

308385
units: 756622
value: 0.0
type: LocalParameter

307934
units: 756622
value: 0.0
type: LocalParameter

773772
stoichiometry: 1.0
species: 301216
type: SpeciesReference

778424
stoichiometry: 1.0
species: 300512
type: SpeciesReference

306632
units: 756574
value: 999999.0
type: LocalParameter

812004
stoichiometry: 1.0
species: 301587
type: SpeciesReference

775274
stoichiometry: 1.0
species: 301332
type: SpeciesReference

301661
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: tRNA_His_R
type: Species

310013
units: 756574
value: 0.0
type: LocalParameter

304837
value: 0.0
type: LocalParameter

816775
stoichiometry: 1.0
species: 300903
type: SpeciesReference

310590
units: 756622
value: 0.0
type: LocalParameter

812719
stoichiometry: 1.0
species: 300903
type: SpeciesReference

760718
stoichiometry: 1.0
species: 300915
type: SpeciesReference

300002
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: 1_hexadec_9_enoyl_sn_glycerol_3_phosphate_C19H35O7P1
type: Species

301964
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Tryptophan_C11H12N2O2
type: Species

789643
stoichiometry: 1.0
species: 300911
type: SpeciesReference

308071
units: 756622
value: 0.0
type: LocalParameter

306998
units: 756574
value: 999999.0
type: LocalParameter

773551
stoichiometry: 1.0
species: 301156
type: SpeciesReference

762649
stoichiometry: 1.0
species: 300414
type: SpeciesReference

302183
kinetic law: 763808
product: 763796
reactant: 763784
notes: Abbreviation: R_PMANM EC Number: 5.4.2.8 SUBSYSTEM: Carbohydrates_MannoseFructoseMetabolism Equation: M[m] an1p[c] <==> M[m] an6p[c] genes: LOCUS:PF10_0169# proteins: GENE ASSOCIATION: (PF10_0169)
fast: false
reversible: true
name: Phosphomannomutase
type: Reaction

303782
product: 800160
type: Reaction
reactant: 800136
product: 800172
notes: Abbreviation: R_NTD3pp EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_dcmp[c] + M_h2o[c] --> M_dcyt[c] + M_pi[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
reactant: 800148
kinetic law: 800184
reversible: false
fast: false
name: 5'-nucleotidase

308647
value: 0.0
type: LocalParameter

303107
name: 4-(cytidine_5'-diphospho)-2-C-methyl-D-erythritol_kinase
reversible: false
notes: Abbreviation: R_CDPMEK_ap EC Number: 2.7.1.148 SUBSYSTEM: Lipids_IsoprenoidsMetabolism Equation: M_4c2me[ap] + M_atp[ap] --> M_2p4c2me[ap] + M_adp[ap] + M_h[ap] genes: LOCUS:PFE0150c# proteins: GENE ASSOCIATION: (PFE0150c)
reactant: 784620
product: 784668
reactant: 784632
product: 784656
product: 784644
type: Reaction
fast: false
kinetic law: 784680

778594
stoichiometry: 1.0
species: 300512
type: SpeciesReference

304340
kinetic law: 811138
product: 811126
reactant: 811114
notes: Abbreviation: R_PA141tap EC Number: SUBSYSTEM: Transport_AP Equation: M_pa141[ap] <==> M_pa141[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PA141tap
type: Reaction

791650
stoichiometry: 1.0
species: 301268
type: SpeciesReference

308386
units: 756574
value: 0.0
type: LocalParameter

797478
stoichiometry: 1.0
species: 301264
type: SpeciesReference

760405
stoichiometry: 1.0
species: 301473
type: SpeciesReference

308499
value: 0.0
type: LocalParameter

301888
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Inosine_C10H12N4O5
type: Species

300158
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

310016
value: 0.0
type: LocalParameter

802153
stoichiometry: 1.0
species: 300536
type: SpeciesReference

300380
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: acyl_phosphatidylglycerol_n_C141_C48H86O11P
type: Species

788691
stoichiometry: 1.0
species: 300911
type: SpeciesReference

308072
units: 756574
value: 0.0
type: LocalParameter

780325
stoichiometry: 1.0
species: 301585
type: SpeciesReference

303884
type: Reaction
notes: Abbreviation: R_NDPK6 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; Nucleotides_PurineMetabolism ; Lipids_DolicholMetabolism Equation: M_atp[c] + M_dudp[c] <==> M_adp[c] + M_dutp[c] genes: LOCUS:PF13_0349# LOCUS:PFF0275c# proteins: GENE ASSOCIATION: (PF13_0349) or (PFF0275c)
name: nucleoside-diphosphate_kinase
kinetic law: 802349
fast: false
reactant: 802311
product: 802336
reversible: true
reactant: 802299
product: 802323

301966
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: tetradecanoate_n_C140_C14H27O2
type: Species

762008
stoichiometry: 1.0
species: 300911
type: SpeciesReference

305287
units: 756574
value: 0.0
type: LocalParameter

808228
stoichiometry: 2.0
species: 300925
type: SpeciesReference

306634
value: 0.0
type: LocalParameter

309338
units: 756574
value: 999999.0
type: LocalParameter

809475
stoichiometry: 1.0
species: 300540
type: SpeciesReference

304775
kinetic law: 817356
product: 817344
product: 817332
reactant: 817320
notes: Abbreviation: R_PTHPS2 EC Number: 4.2.3.12 SUBSYSTEM: Cofactors_FolateBiosynthesis Equation: M_ahdt[c] --> M_6hmhpt[c] + M_pppi[c] genes: LOCUS:PFF1360w# proteins: GENE ASSOCIATION: (PFF1360w)
fast: false
reversible: false
name: 6-pyruvoyltetrahydropterin_synthase
type: Reaction

801670
stoichiometry: 1.0
species: 301390
type: SpeciesReference

308644
units: 756574
value: 0.0
type: LocalParameter

308387
units: 756574
value: 999999.0
type: LocalParameter

307932
value: 0.0
type: LocalParameter

300004
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1_hexadec_9_enoyl_sn_glycerol_3_phosphate_C19H35O7P1
type: Species

309169
value: 0.0
type: LocalParameter

301663
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: tRNA_Ile_R
type: Species

793900
stoichiometry: 1.0
species: 300851
type: SpeciesReference

310015
units: 756574
value: 999999.0
type: LocalParameter

802599
stoichiometry: 1.0
species: 300903
type: SpeciesReference

310592
units: 756574
value: 999999.0
type: LocalParameter

306996
units: 756622
value: 0.0
type: LocalParameter

764328
stoichiometry: 1.0
species: 300771
type: SpeciesReference

816835
stoichiometry: 1.0
species: 301390
type: SpeciesReference

766837
stoichiometry: 1.0
species: 300208
type: SpeciesReference

308645
units: 756574
value: 999999.0
type: LocalParameter

306780
value: 0.0
type: LocalParameter

302185
kinetic law: 763857
product: 763845
product: 763833
reactant: 763821
notes: Abbreviation: R_DRPA EC Number: 4.1.2.4 SUBSYSTEM: Carbohydrates_PentosePhosphateCycle Equation: M_2dr5p[c] --> M_acald[c] + M_g3p[c] genes: LOCUS:PF10_0210# proteins: GENE ASSOCIATION: (PF10_0210)
fast: false
reversible: false
name: Deoxyribose-phosphate_aldolase
type: Reaction

308988
value: 0.0
type: LocalParameter

303998
reactant: 804931
notes: Abbreviation: R_SUCD3_u6m_mt EC Number: 1.3.5.1 SUBSYSTEM: Others_MitochondrialElectronFlow Equation: M_fadh2[m] + M_q8[m] <==> M_fad[m] + M_q8h2[m] genes: LOCUS:PF10_0334# proteins: GENE ASSOCIATION: (PF10_0334)
kinetic law: 804979
reversible: true
product: 804955
type: Reaction
fast: false
product: 804967
name: succinate_dehydrogenase_(ubiquinone)
reactant: 804943

305286
units: 756622
value: 0.0
type: LocalParameter

309337
units: 756574
value: 0.0
type: LocalParameter

794648
stoichiometry: 1.0
species: 301390
type: SpeciesReference

793049
stoichiometry: 1.0
species: 300911
type: SpeciesReference

304834
units: 756574
value: 999999.0
type: LocalParameter

304085
kinetic law: 806817
product: 806805
reactant: 806793
notes: Abbreviation: R_CO2t EC Number: SUBSYSTEM: Transport Equation: M[c] o2[e] <==> M[c] o2[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_CO2t
type: Reaction

307931
units: 756574
value: 999999.0
type: LocalParameter

760501
stoichiometry: 1.0
species: 299936
type: SpeciesReference

300152
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: _S_3_Methyl_2_oxopentanoate_C6H9O3
type: Species

308074
units: 756574
value: 999999.0
type: LocalParameter

310595
units: 756622
value: 0.0
type: LocalParameter

762154
stoichiometry: 1.0
species: 300855
type: SpeciesReference

798317
stoichiometry: 4.0
species: 300741
type: SpeciesReference

306993
units: 756574
value: 999999.0
type: LocalParameter

307939
units: 756622
value: 0.0
type: LocalParameter

786233
stoichiometry: 1.0
species: 301276
type: SpeciesReference

306880
units: 756574
value: -999999.0
type: LocalParameter

800015
stoichiometry: 1.0
species: 300903
type: SpeciesReference

307510
units: 756574
value: 999999.0
type: LocalParameter

303785
fast: false
reversible: false
name: 5'-nucleotidase
type: Reaction
reactant: 800208
notes: Abbreviation: R_NTD4 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M[c] mp[c] + M_h2o[c] --> M[c] ytd[c] + M_pi[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
kinetic law: 800244
product: 800232
product: 800220
reactant: 800196

303104
notes: Abbreviation: R_PIN4K EC Number: 2.7.1.67 SUBSYSTEM: Lipids_InositolPhosphateMetabolism Equation: M_atp[c] + (0.01) M_ptd1ino[c] --> M_adp[c] + M_h[c] + (0.01) M_ptd4ino[c] genes: LOCUS:PFE0485w# proteins: GENE ASSOCIATION: (PFE0485w)
product: 784596
reactant: 784560
type: Reaction
reversible: false
name: 1-phosphatidylinositol_4-kinase
reactant: 784548
kinetic law: 784608
fast: false
product: 784572
product: 784584

309887
units: 756574
value: -999999.0
type: LocalParameter

300008
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1_hexadecanoyl_sn_glycerol_3_phosphate_C19H37O7P1
type: Species

304833
units: 756574
value: 0.0
type: LocalParameter

309336
units: 756622
value: 0.0
type: LocalParameter

309441
units: 756574
value: -999999.0
type: LocalParameter

796952
stoichiometry: 1.0
species: 300775
type: SpeciesReference

768147
stoichiometry: 3.0
species: 300903
type: SpeciesReference

308075
value: 0.0
type: LocalParameter

305280
units: 756574
value: 999999.0
type: LocalParameter

795286
stoichiometry: 1.0
species: 301148
type: SpeciesReference

301960
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Threonine_C4H9NO3
type: Species

758727
stoichiometry: 1.0
species: 300414
type: SpeciesReference

310594
value: 0.0
type: LocalParameter

803986
stoichiometry: 1.0
species: 300332
type: SpeciesReference

761372
stoichiometry: 1.0
species: 300370
type: SpeciesReference

763699
stoichiometry: 1.0
species: 301076
type: SpeciesReference

806033
stoichiometry: 1.0
species: 300899
type: SpeciesReference

300006
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: 1_hexadecanoyl_sn_glycerol_3_phosphate_C19H37O7P1
type: Species

307938
value: 0.0
type: LocalParameter

306881
units: 756574
value: 999999.0
type: LocalParameter

306994
value: 0.0
type: LocalParameter

794949
stoichiometry: 1.0
species: 301390
type: SpeciesReference

301665
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: tRNA_Leu_R
type: Species

308382
units: 756574
value: 999999.0
type: LocalParameter

301739
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Uridine_C9H12N2O6
type: Species

774826
stoichiometry: 1.0
species: 301751
type: SpeciesReference

763109
stoichiometry: 1.0
species: 300616
type: SpeciesReference

308643
units: 756622
value: 0.0
type: LocalParameter

304625
kinetic law: 815193
product: 815181
reactant: 815169
notes: Abbreviation: R_AHCYStmt EC Number: SUBSYSTEM: Transport_MT Equation: M_ahcys[m] <==> M_ahcys[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_AHCYStmt
type: Reaction

304778
product: 817404
product: 817416
reversible: false
reactant: 817392
type: Reaction
fast: false
name: cysteine_desulfurase
reactant: 817368
kinetic law: 817452
product: 817440
product: 817428
reactant: 817380
notes: Abbreviation: R_THZPSN_mt EC Number: 2.8.1.7 SUBSYSTEM: Cofactors_ThiamineMetabolism Equation: M[c] ys_L[m] + M_dxyl5p[m] + M_tyr_L[m] --> M_4hba[m] + M_4mhetz[m] + M_ala_L[m] + M[c] o2[m] genes: LOCUS:MAL7P1_150# LOCUS:PF07_0068# proteins: GENE ASSOCIATION: (MAL7P1_150) or (PF07_0068)

309886
units: 756622
value: 0.0
type: LocalParameter

306407
units: 756574
value: 999999.0
type: LocalParameter

304832
units: 756622
value: 0.0
type: LocalParameter

765003
stoichiometry: 1.0
species: 301501
type: SpeciesReference

303260
reactant: 788220
reversible: false
name: glycerophosphodiester_phosphodiesterase
product: 788268
reactant: 788232
product: 788244
type: Reaction
fast: false
notes: Abbreviation: R_GPDDA4pp EC Number: 3.1.4.46 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_g3pg[c] + M_h2o[c] --> M_glyc[c] + M_glyc3p[c] + M_h[c] genes: LOCUS:PF14_0060# proteins: GENE ASSOCIATION: (PF14_0060)
kinetic law: 788280
product: 788256

781647
stoichiometry: 1.0
species: 301693
type: SpeciesReference

805222
stoichiometry: 1.0
species: 300907
type: SpeciesReference

306782
units: 756622
value: 0.0
type: LocalParameter

303572
product: 795710
reversible: false
fast: false
product: 795698
name: sphingomyelin_synthase
notes: Abbreviation: R_SMS EC Number: 2.7.8.27 SUBSYSTEM: Lipids_SphingomyelinCeramideMetabolism Equation: M[c] rm[c] + M_pc[c] --> M_dag[c] + M_sphmyln[c] genes: LOCUS:PFF1215w# proteins: GENE ASSOCIATION: (PFF1215w)
reactant: 795686
type: Reaction
kinetic law: 795722
reactant: 795674

302701
kinetic law: 774633
product: 774621
reactant: 774608
notes: Abbreviation: R_EX_ttdcea_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_ttdcea <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_ttdcea_e_
type: Reaction

309440
units: 756622
value: 0.0
type: LocalParameter

776375
stoichiometry: 1.0
species: 300436
type: SpeciesReference

776642
stoichiometry: 1.0
species: 300911
type: SpeciesReference

300154
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: _S_3_Methyl_2_oxopentanoate_C6H9O3
type: Species

310012
units: 756622
value: 0.0
type: LocalParameter

308383
value: 0.0
type: LocalParameter

306409
units: 756622
value: 0.0
type: LocalParameter

306991
units: 756622
value: 0.0
type: LocalParameter

304088
product: 806853
notes: Abbreviation: R_D_LACt2 EC Number: SUBSYSTEM: Transport Equation: M_h[e] + M_lac_D[e] <==> M_h[c] + M_lac_D[c] genes: proteins: GENE ASSOCIATION:
reactant: 806829
reactant: 806841
product: 806866
kinetic law: 806878
reversible: true
name: R_D_LACt2
fast: false
type: Reaction

308640
units: 756574
value: 999999.0
type: LocalParameter

307936
units: 756574
value: 999999.0
type: LocalParameter

306408
value: 0.0
type: LocalParameter

305283
value: 0.0
type: LocalParameter

303263
type: Reaction
notes: Abbreviation: R_GPDDA5 EC Number: 3.1.4.46 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_g3pi[c] + M_h2o[c] --> M_glyc3p[c] + M_h[c] + M_inost[c] genes: LOCUS:PF14_0060# proteins: GENE ASSOCIATION: (PF14_0060)
name: glycerophosphodiester_phosphodiesterase
reversible: false
reactant: 788304
fast: false
reactant: 788292
product: 788316
product: 788328
kinetic law: 788352
product: 788340

778955
stoichiometry: 1.0
species: 301270
type: SpeciesReference

306630
units: 756574
value: -999999.0
type: LocalParameter

306783
units: 756574
value: -999999.0
type: LocalParameter

770592
stoichiometry: 1.0
species: 301477
type: SpeciesReference

813970
stoichiometry: 1.0
species: 300244
type: SpeciesReference

309334
value: 0.0
type: LocalParameter

797794
stoichiometry: 1.0
species: 299946
type: SpeciesReference

810196
stoichiometry: 1.0
species: 300913
type: SpeciesReference

786173
stoichiometry: 1.0
species: 300464
type: SpeciesReference

302817
type: Reaction
kinetic law: 777614
reactant: 777566
name: 3-oxoacyl-[acyl-carrier-protein]_reductase
reversible: true
reactant: 777578
fast: false
notes: Abbreviation: R_3OAR40_ap EC Number: 1.1.1.100 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_actACP[ap] + M_h[ap] + M_nadph[ap] <==> M_3haACP[ap] + M_nadp[ap] genes: LOCUS:PFI1125c# proteins: GENE ASSOCIATION: (PFI1125c)
reactant: 777554
product: 777602
product: 777590

758238
stoichiometry: 1.0
species: 300344
type: SpeciesReference

310596
units: 756574
value: -999999.0
type: LocalParameter

301962
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Thymidine_C10H14N2O5
type: Species

302704
kinetic law: 774669
product: 774657
reactant: 774645
notes: Abbreviation: R_EX_tyr_L_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_tyr_L <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_tyr_L_e_
type: Reaction

794733
stoichiometry: 1.0
species: 300903
type: SpeciesReference

310011
value: 0.0
type: LocalParameter

301667
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: tRNA_Lys_R
type: Species

306992
units: 756574
value: 0.0
type: LocalParameter

787603
stoichiometry: 1.0
species: 300911
type: SpeciesReference

304628
reactant: 815217
product: 815241
kinetic law: 815253
reversible: false
fast: false
type: Reaction
product: 815229
notes: Abbreviation: R_AKGtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_akg[m] + M[m] al_L[c] --> M_akg[c] + M[m] al_L[m] genes: LOCUS:PF08_0031# proteins: GENE ASSOCIATION: (PF08_0031)
name: R_AKGtmt
reactant: 815205

307935
units: 756574
value: 0.0
type: LocalParameter

757982
stoichiometry: 1.0
species: 301390
type: SpeciesReference

764050
stoichiometry: 1.0
species: 300911
type: SpeciesReference

308641
value: 0.0
type: LocalParameter

303788
kinetic law: 800305
reversible: false
name: 5'-nucleotidase
notes: Abbreviation: R_NTD4pp EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M[c] mp[c] + M_h2o[c] --> M[c] ytd[c] + M_pi[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
product: 800293
fast: false
product: 800281
reactant: 800269
type: Reaction
reactant: 800256

303881
reactant: 802237
product: 802274
notes: Abbreviation: R_NDPK5 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; Nucleotides_PurineMetabolism ; Lipids_DolicholMetabolism Equation: M_atp[c] + M_dgdp[c] <==> M_adp[c] + M_dgtp[c] genes: LOCUS:PF13_0349# LOCUS:PFF0275c# proteins: GENE ASSOCIATION: (PF13_0349) or (PFF0275c)
fast: false
kinetic law: 802286
name: nucleoside-diphosphate_kinase
reversible: true
reactant: 802249
type: Reaction
product: 802262

780472
stoichiometry: 1.0
species: 300368
type: SpeciesReference

308077
units: 756622
value: 0.0
type: LocalParameter

309333
units: 756574
value: 999999.0
type: LocalParameter

306784
units: 756574
value: 999999.0
type: LocalParameter

302181
kinetic law: 763772
product: 763759
reactant: 763747
notes: Abbreviation: R_MAN6PI EC Number: 5.3.1.8 SUBSYSTEM: Carbohydrates_MannoseFructoseMetabolism Equation: M[m] an6p[c] <==> M_f6p[c] genes: LOCUS:MAL8P1_156# proteins: GENE ASSOCIATION: (MAL8P1_156)
fast: false
reversible: true
name: Mannose-6-phosphate_isomerase
type: Reaction

309888
units: 756574
value: 999999.0
type: LocalParameter

796698
stoichiometry: 1.0
species: 300378
type: SpeciesReference

309778
units: 756574
value: 999999.0
type: LocalParameter

306785
value: 0.0
type: LocalParameter

310447
units: 756622
value: 0.0
type: LocalParameter

302071
name: adenosylhomocysteinase
product: 760019
kinetic law: 760043
reactant: 759995
reactant: 760007
product: 760031
type: Reaction
notes: Abbreviation: R_AHCi EC Number: 3.3.1.1 SUBSYSTEM: AminoAcids_MetPolyamineMetabolism Equation: M_ahcys[c] + M_h2o[c] --> M_adn[c] + M_hcys_L[c] genes: LOCUS:PFE1050w# proteins: GENE ASSOCIATION: (PFE1050w)
reversible: false
fast: false

785931
stoichiometry: 1.0
species: 300414
type: SpeciesReference

302811
type: Reaction
fast: false
notes: Abbreviation: R_3OAR180_ap EC Number: 1.1.1.100 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3ooctdACP[ap] + M_h[ap] + M_nadph[ap] <==> M_3hoctaACP[ap] + M_nadp[ap] genes: LOCUS:PFI1125c# proteins: GENE ASSOCIATION: (PFI1125c)
reactant: 777433
product: 777445
reactant: 777421
product: 777457
reactant: 777409
name: 3-oxoacyl-[acyl-carrier-protein]_reductase
reversible: true
kinetic law: 777469

307514
units: 756574
value: 0.0
type: LocalParameter

300913
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: H_H
type: Species

307728
units: 756574
value: 999999.0
type: LocalParameter

308981
units: 756574
value: 999999.0
type: LocalParameter

306884
units: 756622
value: 0.0
type: LocalParameter

301733
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Urea_CH4N2O
type: Species

806395
stoichiometry: 1.0
species: 300873
type: SpeciesReference

308490
units: 756574
value: 0.0
type: LocalParameter

792627
stoichiometry: 1.0
species: 300911
type: SpeciesReference

817935
stoichiometry: 2.23E-4
species: 301382
type: SpeciesReference

302707
kinetic law: 774705
product: 774693
reactant: 774681
notes: Abbreviation: R_EX_ura_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_ura <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_ura_e_
type: Reaction

786453
stoichiometry: 1.0
species: 301288
type: SpeciesReference

309444
value: 0.0
type: LocalParameter

775419
stoichiometry: 1.0
species: 301206
type: SpeciesReference

770035
stoichiometry: 1.0
species: 300915
type: SpeciesReference

307513
units: 756622
value: 0.0
type: LocalParameter

307727
units: 756574
value: 0.0
type: LocalParameter

814926
stoichiometry: 1.0
species: 300148
type: SpeciesReference

309331
units: 756574
value: 0.0
type: LocalParameter

303677
kinetic law: 798001
reversible: false
notes: Abbreviation: R_PAPA161 EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa161[c] --> M_12dgr161[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)
type: Reaction
product: 797977
fast: false
reactant: 797953
reactant: 797965
product: 797989
name: phosphatidate_phosphatase

774717
stoichiometry: 1.0
species: 301735
type: SpeciesReference

304941
value: 0.0
type: LocalParameter

308982
value: 0.0
type: LocalParameter

309777
units: 756574
value: -999999.0
type: LocalParameter

301735
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Urea_CH4N2O
type: Species

805767
stoichiometry: 1.0
species: 300915
type: SpeciesReference

780742
stoichiometry: 1.0
species: 301238
type: SpeciesReference

300795
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: D_Glucosamine_C6H14NO5
type: Species

760657
stoichiometry: 1.0
species: 301138
type: SpeciesReference

795395
stoichiometry: 1.0
species: 300522
type: SpeciesReference

306885
units: 756574
value: -999999.0
type: LocalParameter

310445
value: 0.0
type: LocalParameter

300915
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: H_H
type: Species

307726
units: 756622
value: 0.0
type: LocalParameter

309443
units: 756574
value: 999999.0
type: LocalParameter

309330
units: 756622
value: 0.0
type: LocalParameter

797685
stoichiometry: 1.0
species: 301390
type: SpeciesReference

302073
reactant: 760055
product: 760079
product: 760103
reactant: 760067
type: Reaction
notes: Abbreviation: R_AMMQLT8 EC Number: SUBSYSTEM: AminoAcids_MetPolyamineMetabolism Equation: M_2dmmql8[c] + M_amet[c] --> M_ahcys[c] + M_h[c] + M[m] ql8[c] genes: LOCUS:PFE1115c# proteins: GENE ASSOCIATION: (PFE1115c)
name: R_AMMQLT8
kinetic law: 760115
fast: false
product: 760091
reversible: false

801935
stoichiometry: 1.0
species: 300414
type: SpeciesReference

310449
units: 756574
value: 999999.0
type: LocalParameter

309021
value: 0.0
type: LocalParameter

306787
units: 756622
value: 0.0
type: LocalParameter

303464
reversible: false
product: 793260
kinetic law: 793296
product: 793272
name: R_CLPNH141pp
product: 793284
reactant: 793248
fast: false
notes: Abbreviation: R_CLPNH141pp EC Number: SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M[c] lpn141[c] + M_h2o[c] --> M_h[c] + M_pa141[c] + M_pg141[c] genes: proteins: GENE ASSOCIATION:
reactant: 793236
type: Reaction

792410
stoichiometry: 1.0
species: 300939
type: SpeciesReference

304622
kinetic law: 815157
product: 815145
reactant: 815133
notes: Abbreviation: R_5AOPtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_5aop[m] <==> M_5aop[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_5AOPtmt
type: Reaction

809932
stoichiometry: 1.0
species: 301000
type: SpeciesReference

308492
units: 756574
value: 999999.0
type: LocalParameter

306882
value: 0.0
type: LocalParameter

810040
stoichiometry: 1.0
species: 300911
type: SpeciesReference

803878
stoichiometry: 1.0
species: 301723
type: SpeciesReference

761264
stoichiometry: 1.0
species: 301531
type: SpeciesReference

302814
product: 777517
type: Reaction
name: 3-oxoacyl-[acyl-carrier-protein]_reductase
notes: Abbreviation: R_3OAR181_ap EC Number: 1.1.1.100 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3ocvac11eACP[ap] + M_h[ap] + M_nadph[ap] --> M_3hcvac11eACP[ap] + M_nadp[ap] genes: LOCUS:PFI1125c# proteins: GENE ASSOCIATION: (PFI1125c)
reactant: 777481
product: 777530
reactant: 777505
reversible: false
fast: false
reactant: 777493
kinetic law: 777542

304346
kinetic law: 811210
product: 811198
reactant: 811186
notes: Abbreviation: R_PA161tap EC Number: SUBSYSTEM: Transport_AP Equation: M_pa161[ap] <==> M_pa161[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PA161tap
type: Reaction

310448
units: 756574
value: -999999.0
type: LocalParameter

301737
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Uridine_C9H12N2O6
type: Species

306788
units: 756574
value: -999999.0
type: LocalParameter

308532
value: 0.0
type: LocalParameter

303266
reversible: false
reactant: 788376
type: Reaction
name: glycerophosphodiester_phosphodiesterase
reactant: 788364
fast: false
product: 788413
notes: Abbreviation: R_GPDDA5pp EC Number: 3.1.4.46 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_g3pi[c] + M_h2o[c] --> M_glyc3p[c] + M_h[c] + M_inost[c] genes: LOCUS:PF14_0060# proteins: GENE ASSOCIATION: (PF14_0060)
kinetic law: 788426
product: 788400
product: 788388

307511
value: 0.0
type: LocalParameter

308493
value: 0.0
type: LocalParameter

810328
stoichiometry: 1.0
species: 301535
type: SpeciesReference

783849
stoichiometry: 1.0
species: 300903
type: SpeciesReference

300793
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: D_Glucosamine_C6H14NO5
type: Species

303269
product: 788462
type: Reaction
reversible: false
reactant: 788450
notes: Abbreviation: R_LPLIPAL1A120pp EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_1ddecg3p[c] + M_h2o[c] --> M_ddca[c] + M_glyc3p[c] + M_h[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
reactant: 788438
name: lysophospholipase
product: 788486
fast: false
product: 788474
kinetic law: 788498

304343
kinetic law: 811174
product: 811162
reactant: 811150
notes: Abbreviation: R_PA160tap EC Number: SUBSYSTEM: Transport_AP Equation: M_pa160[ap] <==> M_pa160[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PA160tap
type: Reaction

809075
stoichiometry: 1.0
species: 300360
type: SpeciesReference

300917
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Hemoglobin_R
type: Species

308389
value: 0.0
type: LocalParameter

773881
stoichiometry: 1.0
species: 301250
type: SpeciesReference

306789
units: 756574
value: 999999.0
type: LocalParameter

308985
units: 756574
value: 0.0
type: LocalParameter

307518
units: 756622
value: 0.0
type: LocalParameter

765569
stoichiometry: 1.0
species: 300334
type: SpeciesReference

301968
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: tetradecenoate_n_C141_C14H25O2
type: Species

302075
notes: Abbreviation: R_METAT EC Number: 2.5.1.6 SUBSYSTEM: AminoAcids_MetPolyamineMetabolism Equation: M_atp[c] + M_h2o[c] + M[m] et_L[c] --> M_amet[c] + M_pi[c] + M_ppi[c] genes: LOCUS:PFI1090w# proteins: GENE ASSOCIATION: (PFI1090w)
product: 760187
fast: false
name: methionine_adenosyltransferase
reactant: 760139
reversible: false
reactant: 760127
type: Reaction
kinetic law: 760199
reactant: 760151
product: 760175
product: 760163

794889
stoichiometry: 1.0
species: 301390
type: SpeciesReference

799497
stoichiometry: 1.0
species: 300686
type: SpeciesReference

310442
units: 756574
value: 0.0
type: LocalParameter

783559
stoichiometry: 1.0
species: 300186
type: SpeciesReference

814068
stoichiometry: 1.0
species: 300911
type: SpeciesReference

802489
stoichiometry: 1.0
species: 300332
type: SpeciesReference

807695
stoichiometry: 1.0
species: 300913
type: SpeciesReference

767727
stoichiometry: 1.0
species: 301184
type: SpeciesReference

308495
units: 756622
value: 0.0
type: LocalParameter

767511
stoichiometry: 1.0
species: 301142
type: SpeciesReference

309448
units: 756574
value: 999999.0
type: LocalParameter

304945
units: 756574
value: 0.0
type: LocalParameter

770880
stoichiometry: 1.0
species: 301483
type: SpeciesReference

781383
stoichiometry: 1.0
species: 300901
type: SpeciesReference

307517
value: 0.0
type: LocalParameter

308986
units: 756574
value: 999999.0
type: LocalParameter

303887
reversible: true
reactant: 802362
fast: false
name: nucleoside-diphosphate_kinase
kinetic law: 802414
product: 802401
product: 802388
type: Reaction
reactant: 802375
notes: Abbreviation: R_NDPK7 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; Nucleotides_PurineMetabolism ; Lipids_DolicholMetabolism Equation: M_atp[c] + M_dcdp[c] <==> M_adp[c] + M_dctp[c] genes: LOCUS:PF13_0349# LOCUS:PFF0275c# proteins: GENE ASSOCIATION: (PF13_0349) or (PFF0275c)

303992
reactant: 804799
reversible: false
name: NADH_dehydrogenase_(ubiquinone)
product: 804835
notes: Abbreviation: R_NADH5 EC Number: 1.6.5.3 SUBSYSTEM: Others_MitochondrialElectronFlow Equation: M_h[c] + M_nadh[c] + M_q8[c] --> M_nad[c] + M_q8h2[c] genes: LOCUS:PFI0735c# proteins: GENE ASSOCIATION: (PFI0735c)
fast: false
reactant: 804823
reactant: 804811
kinetic law: 804859
product: 804847
type: Reaction

811496
stoichiometry: 1.0
species: 301428
type: SpeciesReference

302187
reversible: true
fast: false
product: 763893
name: glucose-6-phosphate_dehydrogenase
type: Reaction
reactant: 763869
kinetic law: 763929
product: 763905
notes: Abbreviation: R_G6PDH2r EC Number: 1.1.1.49 SUBSYSTEM: Carbohydrates_PentosePhosphateCycle Equation: M_g6p[c] + M_nadp[c] <==> M_6pgl[c] + M_h[c] + M_nadph[c] genes: LOCUS:PF14_0511# proteins: GENE ASSOCIATION: (PF14_0511)
product: 763917
reactant: 763881

310441
units: 756622
value: 0.0
type: LocalParameter

306889
units: 756622
value: 0.0
type: LocalParameter

756938
stoichiometry: 1.0
species: 300829
type: SpeciesReference

789752
stoichiometry: 1.0
species: 299992
type: SpeciesReference

771524
stoichiometry: 1.0
species: 301797
type: SpeciesReference

300791
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: D_Glucosamine_6_phosphate_C6H13NO8P
type: Species

304946
units: 756574
value: 999999.0
type: LocalParameter

758957
stoichiometry: 1.0
species: 301000
type: SpeciesReference

304944
units: 756622
value: 0.0
type: LocalParameter

797588
stoichiometry: 1.0
species: 300903
type: SpeciesReference

303674
notes: Abbreviation: R_PAPA160pp EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa160[c] --> M_12dgr160[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)
product: 797916
type: Reaction
kinetic law: 797941
reactant: 797904
fast: false
reactant: 797892
reversible: false
product: 797929
name: phosphatidate_phosphatase

308496
units: 756574
value: 0.0
type: LocalParameter

300919
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Hemoglobin_R
type: Species

764919
stoichiometry: 1.0
species: 301130
type: SpeciesReference

302077
reactant: 760211
kinetic law: 760273
fast: false
name: methionine_synthase
notes: Abbreviation: R_METS EC Number: 2.1.1.13 SUBSYSTEM: AminoAcids_MetPolyamineMetabolism Equation: M_5mthf[c] + M_hcys_L[c] --> M_h[c] + M[m] et_L[c] + M_thf[c] genes: proteins: GENE ASSOCIATION:
reactant: 760223
type: Reaction
product: 760261
reversible: false
product: 760248
product: 760235

762757
stoichiometry: 1.0
species: 300911
type: SpeciesReference

308648
units: 756622
value: 0.0
type: LocalParameter

309447
units: 756574
value: -999999.0
type: LocalParameter

812307
stoichiometry: 1.0
species: 300901
type: SpeciesReference

310444
units: 756574
value: 999999.0
type: LocalParameter

306886
units: 756574
value: 999999.0
type: LocalParameter

775564
stoichiometry: 1.0
species: 300444
type: SpeciesReference

817078
stoichiometry: 36.0
species: 301036
type: SpeciesReference

781238
stoichiometry: 1.0
species: 300512
type: SpeciesReference

301731
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Uracil_C4H4N2O2
type: Species

778534
stoichiometry: 1.0
species: 300422
type: SpeciesReference

308984
units: 756622
value: 0.0
type: LocalParameter

791020
stoichiometry: 1.0
species: 300777
type: SpeciesReference

302189
notes: Abbreviation: R_GND EC Number: 1.1.1.44 SUBSYSTEM: Carbohydrates_PentosePhosphateCycle Equation: M_6pgc[c] + M_nadp[c] --> M[c] o2[c] + M_nadph[c] + M_ru5p_D[c] genes: LOCUS:PF14_0520# proteins: GENE ASSOCIATION: (PF14_0520)
name: phosphogluconate_dehydrogenase_(decarboxylating)
reversible: false
product: 763965
type: Reaction
reactant: 763953
reactant: 763941
product: 763989
fast: false
product: 763977
kinetic law: 764001

308497
units: 756574
value: 999999.0
type: LocalParameter

812998
stoichiometry: 1.0
species: 300610
type: SpeciesReference

303461
reactant: 793176
product: 793188
fast: false
product: 793200
product: 793212
notes: Abbreviation: R_CLPNH140pp EC Number: SUBSYSTEM: Lipids_PhosphatidylethanolaminePhosphatidylserineMetabolism Equation: M[c] lpn140[c] + M_h2o[c] --> M_h[c] + M_pa140[c] + M_pg140[c] genes: proteins: GENE ASSOCIATION:
type: Reaction
kinetic law: 793224
name: R_CLPNH140pp
reversible: false
reactant: 793164

772491
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species: 300843
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307515
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309446
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308649
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776794
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306887
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787833
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300000
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306867
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310451
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810461
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815999
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307399
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307258
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308209
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303449
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name: phospholipase_A2
reactant: 792868
kinetic law: 792929
product: 792904
notes: Abbreviation: R_PLIPA2G161pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pg161[c] --> M_1agpg161[c] + M_h[c] + M_hdcea[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
product: 792917
reactant: 792880
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product: 792892

793791
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species: 301360
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303671
name: phosphatidate_phosphatase
reactant: 797843
product: 797856
type: Reaction
reactant: 797830
product: 797868
notes: Abbreviation: R_PAPA160 EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa160[c] --> M_12dgr160[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)
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fast: false
kinetic law: 797880

306225
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817392
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757349
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310452
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name: phosphatidylethanolamine_didodecanoyl_n_C120_C29H58N1O8P1
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300588
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805973
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792868
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309026
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304938
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310154
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768739
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301529
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303248
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kinetic law: 787990
reactant: 787930
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reversible: false
reactant: 787942
name: glycerophosphodiester_phosphodiesterase
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product: 787978
notes: Abbreviation: R_GPDDA2pp EC Number: 3.1.4.46 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_g3pe[c] + M_h2o[c] --> M[e] tha[c] + M_glyc3p[c] + M_h[c] genes: LOCUS:PF14_0060# proteins: GENE ASSOCIATION: (PF14_0060)
product: 787954

307256
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776509
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species: 300811
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308776
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770241
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306227
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768003
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804907
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760864
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301306
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name: phosphatidylethanolamine_didodecanoyl_n_C120_C29H58N1O8P1
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306868
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787133
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813374
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806165
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310155
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306000
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307720
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303446
notes: Abbreviation: R_PLIPA2G160pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pg160[c] --> M_1agpg160[c] + M_h[c] + M_hdca[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
product: 792832
type: Reaction
product: 792844
name: phospholipase_A2
product: 792820
kinetic law: 792856
fast: false
reversible: false
reactant: 792796
reactant: 792808

306579
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308775
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778159
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307398
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307257
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305120
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784776
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773418
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300230
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: 4_Methyl_2_oxopentanoate_C6H9O3
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804338
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301527
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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766219
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779041
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species: 300002
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808930
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309763
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791250
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307141
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309025
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773116
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species: 301010
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300584
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initial concentration: NaN
initial amount: NaN
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name: dCTP_C9H12N3O13P3
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768424
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species: 301727
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763941
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species: 300264
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758837
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816217
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812452
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302081
type: Reaction
reactant: 760369
fast: false
name: Ornithine_decarboxylase
notes: Abbreviation: R_ORNDC EC Number: 4.1.1.17 SUBSYSTEM: AminoAcids_MetPolyamineMetabolism Equation: M_h[c] + M_orn[c] --> M[c] o2[c] + M_ptrc[c] genes: LOCUS:PF10_0322# proteins: GENE ASSOCIATION: (PF10_0322)
reactant: 760381
product: 760393
kinetic law: 760417
product: 760405
reversible: false

779488
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species: 301128
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300911
constant: false
boundary condition: false
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name: H_H
type: Species

304349
kinetic law: 811246
product: 811234
reactant: 811222
notes: Abbreviation: R_PA180tap EC Number: SUBSYSTEM: Transport_AP Equation: M_pa180[ap] <==> M_pa180[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PA180tap
type: Reaction

308204
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value: 0.0
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308777
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value: 999999.0
type: LocalParameter

307255
units: 756622
value: 0.0
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306220
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value: 0.0
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307142
units: 756574
value: 999999.0
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305126
units: 756622
value: 0.0
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309182
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802636
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species: 300436
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791104
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310158
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785606
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species: 300903
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780532
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309022
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759778
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307723
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305123
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779525
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species: 301134
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306223
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307252
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value: 999999.0
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303443
notes: Abbreviation: R_PLIPA2G141pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pg141[c] --> M_1agpg141[c] + M_h[c] + M_ttdcea[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
reactant: 792723
type: Reaction
product: 792771
reversible: false
product: 792747
fast: false
name: phospholipase_A2
kinetic law: 792783
reactant: 792735
product: 792759

308990
units: 756574
value: 0.0
type: LocalParameter

301525
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: D_Sorbitol_C6H14O6
type: Species

308207
value: 0.0
type: LocalParameter

310159
value: 0.0
type: LocalParameter

301523
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boundary condition: false
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initial amount: NaN
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name: D_Sorbitol_C6H14O6
type: Species

309023
units: 756574
value: -999999.0
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307140
units: 756622
value: 0.0
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770301
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791638
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species: 300903
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300586
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initial concentration: NaN
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name: Deoxycytidine_C9H13N3O4
type: Species

308779
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769673
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species: 300234
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307724
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306222
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309180
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307253
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309762
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308206
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309872
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307145
units: 756622
value: 0.0
type: LocalParameter

303554
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notes: Abbreviation: R_DHCRD1 EC Number: SUBSYSTEM: Lipids_SphingomyelinCeramideMetabolism Equation: M_dhcrm[c] + M_nadp[c] --> M[c] rm[c] + M_h[c] + M_nadph[c] genes: proteins: GENE ASSOCIATION:
product: 795262
fast: false
name: R_DHCRD1
kinetic law: 795298
reactant: 795250
reactant: 795238
reversible: false
product: 795274
type: Reaction

781972
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species: 300849
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303101
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notes: Abbreviation: R_PIN3K EC Number: 2.7.1.137 SUBSYSTEM: Lipids_InositolPhosphateMetabolism Equation: M_atp[c] + (0.01) M_ptd1ino[c] --> M_adp[c] + M_h[c] + (0.01) M_ptd3ino[c] genes: LOCUS:PFE0765w# proteins: GENE ASSOCIATION: (PFE0765w)
product: 784499
reactant: 784487
type: Reaction
fast: false
name: phosphatidylinositol_3-kinase
kinetic law: 784536
product: 784523
reversible: false
reactant: 784475

306429
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308057
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304792
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305056
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306574
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768316
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803515
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305496
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307391
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307250
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300234
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306428
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309873
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307251
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793574
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306573
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308056
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305057
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300174
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name: 3_Oxohexadecanoyl_CoA_C37H60N7O18P3S
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771813
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306979
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817090
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300388
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name: acyl_phosphatidylglycerol_n_C181_C60H110O11P
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802744
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species: 300903
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301892
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name: L_Lactate_C3H5O3
type: Species

300580
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name: dCDP_C9H12N3O10P2
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value: 0.0
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306427
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305127
units: 756574
value: 0.0
type: LocalParameter

304079
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product: 806709
reactant: 806697
notes: Abbreviation: R_CHOLtu EC Number: SUBSYSTEM: Transport Equation: M[c] hol[e] <==> M[c] hol[c] genes: LOCUS:PFL0620c# proteins: GENE ASSOCIATION: (PFL0620c)
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reversible: true
name: R_CHOLtu
type: Reaction

309870
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value: -999999.0
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309183
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308055
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781803
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779332
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810762
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794322
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300232
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775117
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779633
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800293
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305128
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804046
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812173
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309184
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303551
type: Reaction
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reversible: false
reactant: 795189
product: 795214
product: 795202
kinetic law: 795226
reactant: 795165
name: 3-dehydrosphinganine_reductase
reactant: 795177
notes: Abbreviation: R_3DSPHR EC Number: 1.1.1.102 SUBSYSTEM: Lipids_SphingomyelinCeramideMetabolism Equation: M_3dsphgn[c] + M_h[c] + M_nadph[c] --> M_nadp[c] + M_sphgn[c] genes: LOCUS:PFD0465c# proteins: GENE ASSOCIATION: (PFD0465c)

307950
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766002
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770458
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301890
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name: 3_Oxohexanoyl_CoA_C27H40N7O18P3S
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790500
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815133
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300386
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name: acyl_phosphatidylglycerol_n_C180_C60H116O11P
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787543
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species: 301454
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807987
stoichiometry: 1.0
species: 300911
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306229
units: 756622
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813812
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species: 301611
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307951
units: 756574
value: 0.0
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306578
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type: LocalParameter

767173
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species: 301124
type: SpeciesReference

306425
units: 756574
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type: LocalParameter

309329
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800583
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species: 300326
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310008
units: 756574
value: -999999.0
type: LocalParameter

814659
stoichiometry: 1.0
species: 300616
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310152
units: 756574
value: 999999.0
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801356
stoichiometry: 1.0
species: 300326
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306976
units: 756622
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306228
value: 0.0
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756720
stoichiometry: 1.0
species: 300903
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305053
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818128
stoichiometry: 59.81
species: 300911
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813837
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species: 301156
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306577
units: 756574
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306638
units: 756574
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791491
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species: 300903
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808555
stoichiometry: 1.0
species: 301545
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306424
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310009
units: 756574
value: 999999.0
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307396
units: 756622
value: 0.0
type: LocalParameter

303557
reactant: 795323
product: 795347
kinetic law: 795359
name: R_DHCRD2
reversible: false
reactant: 795311
type: Reaction
notes: Abbreviation: R_DHCRD2 EC Number: SUBSYSTEM: Lipids_SphingomyelinCeramideMetabolism Equation: M_dhcrm[c] + M_fad[c] --> M[c] rm[c] + M_fadh2[c] genes: proteins: GENE ASSOCIATION:
fast: false
product: 795335

300384
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: acyl_phosphatidylglycerol_n_C161_C54H98O11P
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788364
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species: 300779
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798847
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species: 300634
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301896
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: L_Lysine_C6H15N2O2
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777736
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species: 300142
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777893
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species: 300168
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773346
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species: 301898
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767390
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species: 301136
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300170
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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786380
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species: 301284
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798111
stoichiometry: 1.0
species: 301390
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304794
units: 756574
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780240
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species: 301414
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305276
units: 756622
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784884
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308059
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306423
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307147
units: 756574
value: 999999.0
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307953
units: 756574
value: 999999.0
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792759
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species: 300911
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805864
stoichiometry: 2.0
species: 300907
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309187
units: 756622
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770736
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species: 301485
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304829
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300236
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: 4_Methyl_5_2_phosphoethyl_thiazole_C6H8NO4PS
type: Species

307393
units: 756574
value: 999999.0
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795093
stoichiometry: 1.0
species: 300438
type: SpeciesReference

310005
value: 0.0
type: LocalParameter

801502
stoichiometry: 1.0
species: 300889
type: SpeciesReference

757566
stoichiometry: 1.0
species: 300819
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768847
stoichiometry: 1.0
species: 300058
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793272
stoichiometry: 1.0
species: 301272
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310150
units: 756622
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305050
units: 756574
value: 999999.0
type: LocalParameter

788256
stoichiometry: 1.0
species: 300851
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798546
stoichiometry: 1.0
species: 301416
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306978
units: 756574
value: 999999.0
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775696
stoichiometry: 1.0
species: 301314
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306422
units: 756574
value: 999999.0
type: LocalParameter

782044
stoichiometry: 1.0
species: 301593
type: SpeciesReference

306575
units: 756574
value: -999999.0
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304793
units: 756574
value: 0.0
type: LocalParameter

305277
units: 756574
value: 0.0
type: LocalParameter

770133
stoichiometry: 3.0
species: 300907
type: SpeciesReference

310007
units: 756622
value: 0.0
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307394
value: 0.0
type: LocalParameter

783994
stoichiometry: 1.0
species: 300332
type: SpeciesReference

781093
stoichiometry: 1.0
species: 301070
type: SpeciesReference

307954
value: 0.0
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306636
units: 756622
value: 0.0
type: LocalParameter

307148
value: 0.0
type: LocalParameter

300238
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: D_4_Phosphopantothenate_C9H15NO8P
type: Species

301894
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Leucine_C6H13NO2
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787024
stoichiometry: 1.0
species: 301454
type: SpeciesReference

776070
stoichiometry: 1.0
species: 299940
type: SpeciesReference

309188
units: 756574
value: 0.0
type: LocalParameter

764774
stoichiometry: 1.0
species: 301416
type: SpeciesReference

786003
stoichiometry: 1.0
species: 300911
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784944
stoichiometry: 1.0
species: 301146
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305499
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310151
units: 756574
value: -999999.0
type: LocalParameter

300382
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: acyl_phosphatidylglycerol_n_C160_C54H104O11P
type: Species

794202
stoichiometry: 1.0
species: 300510
type: SpeciesReference

306977
units: 756574
value: 0.0
type: LocalParameter

813265
stoichiometry: 1.0
species: 301012
type: SpeciesReference

799281
stoichiometry: 1.0
species: 300911
type: SpeciesReference

300392
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Arginine_C6H15N4O2
type: Species

308060
units: 756622
value: 0.0
type: LocalParameter

780313
stoichiometry: 1.0
species: 301414
type: SpeciesReference

799148
stoichiometry: 1.0
species: 300861
type: SpeciesReference

785082
stoichiometry: 1.0
species: 300096
type: SpeciesReference

306983
units: 756574
value: 999999.0
type: LocalParameter

310004
units: 756574
value: 999999.0
type: LocalParameter

802141
stoichiometry: 1.0
species: 300332
type: SpeciesReference

306646
value: 0.0
type: LocalParameter

302905
product: 779839
name: enoyl-[acyl-carrier-protein]_reductase_(NADH)
type: Reaction
reversible: false
reactant: 779802
product: 779851
reactant: 779827
kinetic law: 779863
reactant: 779814
notes: Abbreviation: R_EAR181x_ap EC Number: 1.3.1.9 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M_nadh[ap] + M_t3c11vaceACP[ap] --> M_nad[ap] + M_octeACP[ap] genes: LOCUS:PFF0730c# proteins: GENE ASSOCIATION: (PFF0730c)
fast: false

300018
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1_Pyrroline_5_carboxylate_C5H6NO2
type: Species

308632
units: 756622
value: 0.0
type: LocalParameter

804690
stoichiometry: 1.0
species: 301146
type: SpeciesReference

805003
stoichiometry: 1.0
species: 301138
type: SpeciesReference

809487
stoichiometry: 1.0
species: 300913
type: SpeciesReference

301954
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Spermidine_C7H22N3
type: Species

303896
reactant: 802575
product: 802599
type: Reaction
product: 802612
product: 802587
fast: false
name: ribonucleoside-diphosphate_reductase
notes: Abbreviation: R_RNDR2 EC Number: 1.17.4.1 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; Nucleotides_PurineMetabolism ; Redox_RedoxMetabolism Equation: M_gdp[c] + M_trdrd[c] --> M_dgdp[c] + M_h2o[c] + M_trdox[c] genes: LOCUS:PF10_0154# LOCUS:PF14_0053# LOCUS:PF14_0352# proteins: GENE ASSOCIATION: (PF10_0154) or (PF14_0053) or (PF14_0352)
reversible: false
kinetic law: 802624
reactant: 802562

808216
stoichiometry: 1.0
species: 301260
type: SpeciesReference

793356
stoichiometry: 1.0
species: 301352
type: SpeciesReference

787978
stoichiometry: 1.0
species: 300911
type: SpeciesReference

811594
stoichiometry: 1.0
species: 300412
type: SpeciesReference

304490
kinetic law: 813132
product: 813120
reactant: 813108
notes: Abbreviation: R_DURIt EC Number: SUBSYSTEM: Transport_base Equation: M_duri[e] <==> M_duri[c] genes: LOCUS:PFA0160c# LOCUS:MAL8P1_32# LOCUS:PF13_0252# LOCUS:PF14_0662# proteins: GENE ASSOCIATION: (PFA0160c) or (MAL8P1_32) or (PF13_0252) or (PF14_0662)
fast: false
reversible: true
name: R_DURIt
type: Reaction

309326
units: 756574
value: 0.0
type: LocalParameter

308999
value: 0.0
type: LocalParameter

306984
value: 0.0
type: LocalParameter

762432
stoichiometry: 1.0
species: 300414
type: SpeciesReference

816823
stoichiometry: 1.0
species: 300254
type: SpeciesReference

308061
units: 756574
value: 0.0
type: LocalParameter

301675
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: tRNA_SeCys_R
type: Species

814213
stoichiometry: 1.0
species: 300913
type: SpeciesReference

300016
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1_octadecanoyl_sn_glycerol_3_phosphate_C21H41O7P1
type: Species

793912
stoichiometry: 1.0
species: 300510
type: SpeciesReference

780694
stoichiometry: 1.0
species: 300412
type: SpeciesReference

767715
stoichiometry: 2.0
species: 300909
type: SpeciesReference

306647
units: 756622
value: 0.0
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307943
value: 0.0
type: LocalParameter

308633
units: 756574
value: 0.0
type: LocalParameter

304073
name: R_AKGMAL
notes: Abbreviation: R_AKGMAL EC Number: SUBSYSTEM: Transport Equation: M_akg[c] + M[m] al_L[e] <==> M[m] al_L[c] + M_akg[e] genes: proteins: GENE ASSOCIATION:
product: 806612
reactant: 806576
product: 806600
type: Reaction
fast: false
reversible: true
kinetic law: 806624
reactant: 806588

769236
stoichiometry: 1.0
species: 300911
type: SpeciesReference

306792
units: 756622
value: 0.0
type: LocalParameter

302197
notes: Abbreviation: R_R1PK EC Number: SUBSYSTEM: Carbohydrates_PentosePhosphateCycle Equation: M_atp[c] + M_r1p[c] --> M_adp[c] + M_h[c] + M_r15bp[c] genes: proteins: GENE ASSOCIATION:
name: R_R1PK
kinetic law: 764244
fast: false
product: 764208
reversible: false
reactant: 764183
product: 764220
product: 764232
type: Reaction
reactant: 764195

308528
units: 756622
value: 0.0
type: LocalParameter

309325
units: 756622
value: 0.0
type: LocalParameter

809896
stoichiometry: 1.0
species: 300913
type: SpeciesReference

300390
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: apoprotein_acyl_carrier_protein_RHO
type: Species

761480
stoichiometry: 1.0
species: 301416
type: SpeciesReference

804496
stoichiometry: 1.0
species: 301501
type: SpeciesReference

795214
stoichiometry: 1.0
species: 301549
type: SpeciesReference

302808
reactant: 777336
notes: Abbreviation: R_3OAR161_ap EC Number: 1.1.1.100 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3ocpalm9eACP[ap] + M_h[ap] + M_nadph[ap] --> M_3hcpalm9eACP[ap] + M_nadp[ap] genes: LOCUS:PFI1125c# proteins: GENE ASSOCIATION: (PFI1125c)
reversible: false
name: 3-oxoacyl-[acyl-carrier-protein]_reductase
kinetic law: 777397
product: 777372
fast: false
product: 777385
type: Reaction
reactant: 777348
reactant: 777360

300168
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

301898
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Malate_C4H4O5
type: Species

310002
units: 756574
value: -999999.0
type: LocalParameter

304826
units: 756574
value: 999999.0
type: LocalParameter

787761
stoichiometry: 1.0
species: 300911
type: SpeciesReference

304070
reactant: 806516
reactant: 806528
type: Reaction
reversible: true
kinetic law: 806564
notes: Abbreviation: R_ACt2r EC Number: SUBSYSTEM: Transport Equation: M_ac[e] + M_h[e] <==> M_ac[c] + M_h[c] genes: proteins: GENE ASSOCIATION:
product: 806540
name: R_ACt2r
fast: false
product: 806552

785714
stoichiometry: 1.0
species: 300414
type: SpeciesReference

308397
units: 756574
value: 0.0
type: LocalParameter

773784
stoichiometry: 1.0
species: 301922
type: SpeciesReference

300909
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: H_H
type: Species

304785
units: 756574
value: 0.0
type: LocalParameter

307946
units: 756574
value: 0.0
type: LocalParameter

778412
stoichiometry: 1.0
species: 300270
type: SpeciesReference

805429
stoichiometry: 1.0
species: 300524
type: SpeciesReference

308529
units: 756574
value: 0.0
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309879
value: 0.0
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308634
units: 756574
value: 999999.0
type: LocalParameter

305273
value: 0.0
type: LocalParameter

813689
stoichiometry: 1.0
species: 301485
type: SpeciesReference

301952
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Sulfate_O4S
type: Species

789631
stoichiometry: 1.0
species: 300777
type: SpeciesReference

773563
stoichiometry: 1.0
species: 301910
type: SpeciesReference

306986
units: 756622
value: 0.0
type: LocalParameter

812707
stoichiometry: 1.0
species: 300424
type: SpeciesReference

300014
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: 1_octadecanoyl_sn_glycerol_3_phosphate_C21H41O7P1
type: Species

304825
units: 756574
value: 0.0
type: LocalParameter

301673
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: tRNA_Pro_R
type: Species

816787
stoichiometry: 1.0
species: 300254
type: SpeciesReference

309179
units: 756574
value: 999999.0
type: LocalParameter

310001
units: 756622
value: 0.0
type: LocalParameter

304352
kinetic law: 811285
product: 811272
reactant: 811259
notes: Abbreviation: R_PA181tap EC Number: SUBSYSTEM: Transport_AP Equation: M_pa181[ap] <==> M_pa181[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PA181tap
type: Reaction

304786
units: 756574
value: 999999.0
type: LocalParameter

797466
stoichiometry: 1.0
species: 300903
type: SpeciesReference

308398
units: 756574
value: 999999.0
type: LocalParameter

309327
units: 756574
value: 999999.0
type: LocalParameter

304824
units: 756622
value: 0.0
type: LocalParameter

778582
stoichiometry: 1.0
species: 300270
type: SpeciesReference

307945
units: 756622
value: 0.0
type: LocalParameter

306645
units: 756574
value: 999999.0
type: LocalParameter

797252
stoichiometry: 1.0
species: 300777
type: SpeciesReference

771620
stoichiometry: 1.0
species: 300548
type: SpeciesReference

303770
type: Reaction
kinetic law: 799943
product: 799931
notes: Abbreviation: R_NTD1pp EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_dump[c] + M_h2o[c] --> M_duri[c] + M_pi[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
name: 5'-nucleotidase
product: 799919
reactant: 799895
reversible: false
reactant: 799907
fast: false

302195
reactant: 764110
product: 764134
product: 764146
reversible: true
fast: false
product: 764159
notes: Abbreviation: R_PRPPS EC Number: 2.7.6.1 SUBSYSTEM: Carbohydrates_PentosePhosphateCycle Equation: M_atp[c] + M_r5p[c] <==> M_amp[c] + M_h[c] + M_prpp[c] genes: LOCUS:PF13_0143# LOCUS:PF13_0157# proteins: GENE ASSOCIATION: (PF13_0143) or (PF13_0157)
kinetic law: 764171
reactant: 764122
name: ribose-phosphate_diphosphokinase
type: Reaction

765449
stoichiometry: 1.0
species: 300520
type: SpeciesReference

306790
value: 0.0
type: LocalParameter

304493
kinetic law: 813168
product: 813156
reactant: 813144
notes: Abbreviation: R_GSNt EC Number: SUBSYSTEM: Transport_base Equation: M_gsn[e] <==> M_gsn[c] genes: LOCUS:PFA0160c# LOCUS:MAL8P1_32# LOCUS:PF13_0252# LOCUS:PF14_0662# proteins: GENE ASSOCIATION: (PFA0160c) or (MAL8P1_32) or (PF13_0252) or (PF14_0662)
fast: false
reversible: true
name: R_GSNt
type: Reaction

310000
value: 0.0
type: LocalParameter

817719
stoichiometry: 0.1353
species: 300819
type: SpeciesReference

305493
units: 756574
value: -999999.0
type: LocalParameter

300166
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 3_Oxododecanoyl_CoA_C33H52N7O18P3S
type: Species

307949
value: 0.0
type: LocalParameter

302806
reactant: 777276
kinetic law: 777324
reactant: 777288
reversible: true
product: 777300
notes: Abbreviation: R_3OAR160_ap EC Number: 1.1.1.100 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3opalmACP[ap] + M_h[ap] + M_nadph[ap] <==> M_3hpalmACP[ap] + M_nadp[ap] genes: LOCUS:PFI1125c# proteins: GENE ASSOCIATION: (PFI1125c)
reactant: 777264
product: 777312
type: Reaction
fast: false
name: 3-oxoacyl-[acyl-carrier-protein]_reductase

797168
stoichiometry: 1.0
species: 301350
type: SpeciesReference

776654
stoichiometry: 0.1
species: 301054
type: SpeciesReference

308064
value: 0.0
type: LocalParameter

303251
type: Reaction
name: glycerophosphodiester_phosphodiesterase
reactant: 788003
reversible: false
fast: false
product: 788027
notes: Abbreviation: R_GPDDA3 EC Number: 3.1.4.46 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_g3ps[c] + M_h2o[c] --> M_glyc3p[c] + M_h[c] + M_ser_L[c] genes: LOCUS:PF14_0060# proteins: GENE ASSOCIATION: (PF14_0060)
product: 788039
kinetic law: 788063
reactant: 788015
product: 788051

309322
units: 756574
value: 999999.0
type: LocalParameter

309877
units: 756574
value: 999999.0
type: LocalParameter

306642
units: 756622
value: 0.0
type: LocalParameter

310304
units: 756622
value: 0.0
type: LocalParameter

306795
value: 0.0
type: LocalParameter

813982
stoichiometry: 1.0
species: 300911
type: SpeciesReference

304076
reactant: 806636
reactant: 806649
name: R_AKGt2r
product: 806673
notes: Abbreviation: R_AKGt2r EC Number: SUBSYSTEM: Transport Equation: M_akg[e] + M_h[e] <==> M_akg[c] + M_h[c] genes: proteins: GENE ASSOCIATION:
kinetic law: 806685
reversible: true
type: Reaction
fast: false
product: 806661

301679
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: tRNA_Thr_R
type: Species

305492
units: 756622
value: 0.0
type: LocalParameter

785943
stoichiometry: 1.0
species: 300332
type: SpeciesReference

776362
stoichiometry: 1.0
species: 300648
type: SpeciesReference

310302
value: 0.0
type: LocalParameter

794745
stoichiometry: 1.0
species: 301368
type: SpeciesReference

305270
units: 756574
value: 999999.0
type: LocalParameter

786161
stoichiometry: 1.0
species: 301272
type: SpeciesReference

301950
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Serine_C3H7NO3
type: Species

303893
reactant: 802489
reactant: 802501
product: 802525
fast: false
type: Reaction
notes: Abbreviation: R_RNDR1 EC Number: 1.17.4.1 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; Nucleotides_PurineMetabolism ; Redox_RedoxMetabolism Equation: M_adp[c] + M_trdrd[c] --> M_dadp[c] + M_h2o[c] + M_trdox[c] genes: LOCUS:PF10_0154# LOCUS:PF14_0053# LOCUS:PF14_0352# proteins: GENE ASSOCIATION: (PF10_0154) or (PF14_0053) or (PF14_0352)
reversible: false
product: 802513
product: 802537
kinetic law: 802549
name: ribonucleoside-diphosphate_reductase

776939
stoichiometry: 1.0
species: 300134
type: SpeciesReference

306570
units: 756574
value: -999999.0
type: LocalParameter

796686
stoichiometry: 1.0
species: 301348
type: SpeciesReference

302193
kinetic law: 764098
product: 764086
reactant: 764074
notes: Abbreviation: R_PGMT_2 EC Number: 5.4.2.2 SUBSYSTEM: Carbohydrates_PentosePhosphateCycle ; Carbohydrates_Glycolysis Equation: M_r1p[c] <==> M_r5p[c] genes: LOCUS:PF10_0122# proteins: GENE ASSOCIATION: (PF10_0122)
fast: false
reversible: true
name: Phosphoglucomutase
type: Reaction

780460
stoichiometry: 1.0
species: 300931
type: SpeciesReference

307947
units: 756574
value: 999999.0
type: LocalParameter

306643
units: 756574
value: -999999.0
type: LocalParameter

309876
units: 756574
value: -999999.0
type: LocalParameter

787616
stoichiometry: 1.0
species: 301456
type: SpeciesReference

303776
reactant: 800015
reactant: 800028
reversible: false
product: 800052
name: 5'-nucleotidase
notes: Abbreviation: R_NTD2pp EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_h2o[c] + M_ump[c] --> M_pi[c] + M_uri[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
type: Reaction
fast: false
product: 800040
kinetic law: 800064

308396
units: 756622
value: 0.0
type: LocalParameter

779116
stoichiometry: 1.0
species: 301210
type: SpeciesReference

302900
notes: Abbreviation: R_EAR161x_ap EC Number: 1.3.1.9 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M_nadh[ap] + M_t3c9palmeACP[ap] --> M_hdeACP[ap] + M_nad[ap] genes: LOCUS:PFF0730c# proteins: GENE ASSOCIATION: (PFF0730c)
fast: false
product: 779705
name: enoyl-[acyl-carrier-protein]_reductase_(NADH)
kinetic law: 779717
reversible: false
reactant: 779681
reactant: 779657
product: 779693
type: Reaction
reactant: 779669

306981
units: 756622
value: 0.0
type: LocalParameter

300164
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 3_Oxodecanoyl_CoA_C31H48N7O18P3S
type: Species

308393
units: 756574
value: 999999.0
type: LocalParameter

786221
stoichiometry: 1.0
species: 300911
type: SpeciesReference

796808
stoichiometry: 1.0
species: 301352
type: SpeciesReference

757785
stoichiometry: 1.0
species: 301416
type: SpeciesReference

784668
stoichiometry: 1.0
species: 300909
type: SpeciesReference

762166
stoichiometry: 1.0
species: 301142
type: SpeciesReference

786598
stoichiometry: 1.0
species: 300705
type: SpeciesReference

763686
stoichiometry: 1.0
species: 300911
type: SpeciesReference

310301
units: 756574
value: 999999.0
type: LocalParameter

304496
kinetic law: 813205
product: 813192
reactant: 813180
notes: Abbreviation: R_GUAt EC Number: SUBSYSTEM: Transport_base Equation: M_gua[e] <==> M_gua[c] genes: LOCUS:PFA0160c# LOCUS:MAL8P1_32# LOCUS:PF13_0252# LOCUS:PF14_0662# proteins: GENE ASSOCIATION: (PFA0160c) or (MAL8P1_32) or (PF13_0252) or (PF14_0662)
fast: false
reversible: true
name: R_GUAt
type: Reaction

306793
units: 756574
value: 0.0
type: LocalParameter

306640
units: 756574
value: 999999.0
type: LocalParameter

304202
fast: false
reactant: 808591
notes: Abbreviation: R_SO4OXAtex2 EC Number: SUBSYSTEM: Transport Equation: M_oxa[c] + (2.0) M_so4[e] --> M_oxa[e] + (2.0) M_so4[c] genes: proteins: GENE ASSOCIATION:
product: 808615
reactant: 808579
kinetic law: 808627
type: Reaction
product: 808603
name: R_SO4OXAtex2
reversible: false

768159
stoichiometry: 1.0
species: 301422
type: SpeciesReference

303890
product: 802465
notes: Abbreviation: R_NDPK8 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; Nucleotides_PurineMetabolism ; Lipids_DolicholMetabolism Equation: M_atp[c] + M_dadp[c] <==> M_adp[c] + M_datp[c] genes: LOCUS:PF13_0349# LOCUS:PFF0275c# proteins: GENE ASSOCIATION: (PF13_0349) or (PFF0275c)
kinetic law: 802477
type: Reaction
reactant: 802427
reactant: 802441
name: nucleoside-diphosphate_kinase
product: 802453
reversible: true
fast: false

777481
stoichiometry: 1.0
species: 300162
type: SpeciesReference

303668
type: Reaction
name: phosphatidate_phosphatase
product: 797806
product: 797794
reactant: 797782
reactant: 797770
fast: false
reversible: false
kinetic law: 797818
notes: Abbreviation: R_PAPA141pp EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa141[c] --> M_12dgr141[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)

308630
value: 0.0
type: LocalParameter

304821
value: 0.0
type: LocalParameter

304789
value: 0.0
type: LocalParameter

306418
value: 0.0
type: LocalParameter

309875
units: 756622
value: 0.0
type: LocalParameter

303773
notes: Abbreviation: R_NTD2 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_h2o[c] + M_ump[c] --> M_pi[c] + M_uri[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
product: 799979
reactant: 799967
name: 5'-nucleotidase
product: 799991
reversible: false
kinetic law: 800003
fast: false
reactant: 799955
type: Reaction

803974
stoichiometry: 1.0
species: 301723
type: SpeciesReference

306982
units: 756574
value: 0.0
type: LocalParameter

805646
stoichiometry: 1.0
species: 301412
type: SpeciesReference

806045
stoichiometry: 1.0
species: 301190
type: SpeciesReference

815456
stoichiometry: 1.0
species: 300542
type: SpeciesReference

301677
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: tRNA_Ser_R
type: Species

308394
value: 0.0
type: LocalParameter

302803
fast: false
type: Reaction
name: 3-oxoacyl-[acyl-carrier-protein]_reductase
notes: Abbreviation: R_3OAR141_ap EC Number: 1.1.1.100 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3ocmrs7eACP[ap] + M_h[ap] + M_nadph[ap] --> M_3hcmrs7eACP[ap] + M_nadp[ap] genes: LOCUS:PFI1125c# proteins: GENE ASSOCIATION: (PFI1125c)
reversible: false
reactant: 777204
product: 777228
reactant: 777192
kinetic law: 777252
product: 777240
reactant: 777216

308063
units: 756574
value: 999999.0
type: LocalParameter

761384
stoichiometry: 1.0
species: 301390
type: SpeciesReference

758739
stoichiometry: 1.0
species: 301533
type: SpeciesReference

302191
reactant: 764026
reactant: 764013
type: Reaction
product: 764038
product: 764050
fast: false
kinetic law: 764062
notes: Abbreviation: R_PGL EC Number: 3.1.1.31 SUBSYSTEM: Carbohydrates_PentosePhosphateCycle Equation: M_6pgl[c] + M_h2o[c] --> M_6pgc[c] + M_h[c] genes: LOCUS:PF14_0511# proteins: GENE ASSOCIATION: (PF14_0511)
reversible: false
name: 6-phosphogluconolactonase

309323
value: 0.0
type: LocalParameter

765184
stoichiometry: 1.0
species: 301344
type: SpeciesReference

306641
value: 0.0
type: LocalParameter

306794
units: 756574
value: 999999.0
type: LocalParameter

805210
stoichiometry: 1.0
species: 300318
type: SpeciesReference

781635
stoichiometry: 6.0
species: 301140
type: SpeciesReference

798329
stoichiometry: 6.0
species: 300915
type: SpeciesReference

303560
reactant: 795383
product: 795420
kinetic law: 795432
type: Reaction
product: 795395
product: 795408
notes: Abbreviation: R_DSAT EC Number: 2.3.1.24 SUBSYSTEM: Lipids_SphingomyelinCeramideMetabolism Equation: M_Rtotalcoa[c] + M_sphgn[c] --> M[c] oa[c] + M_dhcrm[c] + M_h[c] genes: LOCUS:PFE0405c# proteins: GENE ASSOCIATION: (PFE0405c)
name: sphingosine_N-acyltransferase
reversible: false
reactant: 795371
fast: false

774838
stoichiometry: 1.0
species: 301980
type: SpeciesReference

302902
reactant: 779753
fast: false
product: 779765
notes: Abbreviation: R_EAR180x_ap EC Number: 1.3.1.9 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M_nadh[ap] + M_toctd2eACP[ap] --> M_nad[ap] + M_ocdcaACP[ap] genes: LOCUS:PFF0730c# proteins: GENE ASSOCIATION: (PFF0730c)
reactant: 779741
name: enoyl-[acyl-carrier-protein]_reductase_(NADH)
type: Reaction
reversible: false
reactant: 779729
kinetic law: 779790
product: 779777

306419
units: 756622
value: 0.0
type: LocalParameter

304637
kinetic law: 815363
product: 815351
reactant: 815339
notes: Abbreviation: R_CO2tmt EC Number: SUBSYSTEM: Transport_MT Equation: M[c] o2[m] <==> M[c] o2[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_CO2tmt
type: Reaction

764629
stoichiometry: 1.0
species: 300414
type: SpeciesReference

306799
units: 756574
value: 999999.0
type: LocalParameter

304634
kinetic law: 815326
product: 815314
reactant: 815302
notes: Abbreviation: R_ASPtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_asp_L[m] <==> M_asp_L[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_ASPtmt
type: Reaction

307500
units: 756574
value: 999999.0
type: LocalParameter

809920
stoichiometry: 1.0
species: 300911
type: SpeciesReference

303779
fast: false
reactant: 800088
name: 5'-nucleotidase
product: 800100
notes: Abbreviation: R_NTD3 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_dcmp[c] + M_h2o[c] --> M_dcyt[c] + M_pi[c] genes: LOCUS:PFL0305c# proteins: GENE ASSOCIATION: (PFL0305c)
type: Reaction
reactant: 800076
kinetic law: 800124
product: 800112
reversible: false

307714
value: 0.0
type: LocalParameter

302085
type: Reaction
reversible: false
product: 760537
kinetic law: 760561
product: 760549
name: methionyl-tRNA_formyltransferase
reactant: 760513
fast: false
reactant: 760501
notes: Abbreviation: R_FMETTRS EC Number: 2.1.2.9 SUBSYSTEM: Cofactors_FolateBiosynthesis ; AminoAcids_MetPolyamineMetabolism Equation: M_10fthf[c] + M[m] ettrna[c] --> M_fmettrna[c] + M_h[c] + M_thf[c] genes: LOCUS:MAL13P1_67# proteins: GENE ASSOCIATION: (MAL13P1_67)
product: 760525

310308
value: 0.0
type: LocalParameter

814913
stoichiometry: 1.0
species: 300150
type: SpeciesReference

300903
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: H2O_H2O
type: Species

303452
reactant: 792953
reversible: false
name: phospholipase_A2
type: Reaction
product: 792965
kinetic law: 793001
reactant: 792941
product: 792977
notes: Abbreviation: R_PLIPA2G180pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pg180[c] --> M_1agpg180[c] + M_h[c] + M_ocdca[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
fast: false
product: 792989

801947
stoichiometry: 1.0
species: 300819
type: SpeciesReference

818019
stoichiometry: 2.23E-4
species: 301617
type: SpeciesReference

308200
units: 756574
value: 999999.0
type: LocalParameter

803866
stoichiometry: 1.0
species: 300514
type: SpeciesReference

761276
stoichiometry: 1.0
species: 301539
type: SpeciesReference

810052
stoichiometry: 1.0
species: 301046
type: SpeciesReference

778859
stoichiometry: 1.0
species: 300024
type: SpeciesReference

788920
stoichiometry: 1.0
species: 301220
type: SpeciesReference

798738
stoichiometry: 1.0
species: 300374
type: SpeciesReference

301521
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Saccharopine_C11H19N2O6
type: Species

306870
value: 0.0
type: LocalParameter

309033
units: 756622
value: 0.0
type: LocalParameter

309032
value: 0.0
type: LocalParameter

783160
stoichiometry: 1.0
species: 300522
type: SpeciesReference

304499
kinetic law: 813241
product: 813229
reactant: 813217
notes: Abbreviation: R_HYXNt EC Number: SUBSYSTEM: Transport_base Equation: M_hxan[e] <==> M_hxan[c] genes: LOCUS:PFA0160c# LOCUS:MAL8P1_32# LOCUS:PF13_0252# LOCUS:PF14_0662# proteins: GENE ASSOCIATION: (PFA0160c) or (MAL8P1_32) or (PF13_0252) or (PF14_0662)
fast: false
reversible: true
name: R_HYXNt
type: Reaction

308992
units: 756574
value: 999999.0
type: LocalParameter

301749
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Xanthine_C5H4N4O2
type: Species

304358
kinetic law: 811363
product: 811351
reactant: 811337
notes: Abbreviation: R_PItap EC Number: SUBSYSTEM: Transport_AP Equation: M_pi[ap] <==> M_pi[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PItap
type: Reaction

309430
units: 756574
value: 0.0
type: LocalParameter

306007
units: 756574
value: 999999.0
type: LocalParameter

807418
stoichiometry: 1.0
species: 300855
type: SpeciesReference

303254
reversible: false
product: 788112
reactant: 788087
kinetic law: 788136
product: 788099
fast: false
name: glycerophosphodiester_phosphodiesterase
notes: Abbreviation: R_GPDDA3pp EC Number: 3.1.4.46 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_g3ps[c] + M_h2o[c] --> M_glyc3p[c] + M_h[c] + M_ser_L[c] genes: LOCUS:PF14_0060# proteins: GENE ASSOCIATION: (PF14_0060)
product: 788124
reactant: 788075
type: Reaction

302800
product: 777168
product: 777156
name: 3-oxoacyl-[acyl-carrier-protein]_reductase
reactant: 777120
kinetic law: 777180
reactant: 777132
fast: false
notes: Abbreviation: R_3OAR140_ap EC Number: 1.1.1.100 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_3omrsACP[ap] + M_h[ap] + M_nadph[ap] <==> M_3hmrsACP[ap] + M_nadp[ap] genes: LOCUS:PFI1125c# proteins: GENE ASSOCIATION: (PFI1125c)
reversible: true
type: Reaction
reactant: 777144

301300
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
type: Species

309767
units: 756574
value: 999999.0
type: LocalParameter

797012
stoichiometry: 1.0
species: 300775
type: SpeciesReference

769393
stoichiometry: 2.0
species: 300903
type: SpeciesReference

810316
stoichiometry: 1.0
species: 300819
type: SpeciesReference

777590
stoichiometry: 1.0
species: 300122
type: SpeciesReference

304930
units: 756574
value: 999999.0
type: LocalParameter

308521
value: 0.0
type: LocalParameter

308993
value: 0.0
type: LocalParameter

306797
units: 756622
value: 0.0
type: LocalParameter

309766
units: 756574
value: -999999.0
type: LocalParameter

302083
reactant: 760429
product: 760453
kinetic law: 760489
name: spermidine_synthase
type: Reaction
fast: false
reactant: 760441
product: 760477
reversible: false
notes: Abbreviation: R_SPMS EC Number: 2.5.1.16 SUBSYSTEM: AminoAcids_MetPolyamineMetabolism Equation: M_ametam[c] + M_ptrc[c] --> M_5mta[c] + M_h[c] + M_spmd[c] genes: LOCUS:PF11_0301# proteins: GENE ASSOCIATION: (PF11_0301)
product: 760465

310306
units: 756574
value: 999999.0
type: LocalParameter

300901
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: H2O_H2O
type: Species

309433
value: 0.0
type: LocalParameter

310459
units: 756574
value: -999999.0
type: LocalParameter

781527
stoichiometry: 1.0
species: 301212
type: SpeciesReference

309320
units: 756574
value: 0.0
type: LocalParameter

308202
value: 0.0
type: LocalParameter

306008
value: 0.0
type: LocalParameter

307716
units: 756574
value: 0.0
type: LocalParameter

800112
stoichiometry: 1.0
species: 301390
type: SpeciesReference

817947
stoichiometry: 0.1085
species: 301434
type: SpeciesReference

306872
units: 756622
value: 0.0
type: LocalParameter

816931
stoichiometry: 1.0
species: 300917
type: SpeciesReference

792615
stoichiometry: 1.0
species: 300594
type: SpeciesReference

806383
stoichiometry: 1.0
species: 300672
type: SpeciesReference

814321
stoichiometry: 1.0
species: 301220
type: SpeciesReference

308522
units: 756622
value: 0.0
type: LocalParameter

309765
units: 756622
value: 0.0
type: LocalParameter

306798
units: 756574
value: -999999.0
type: LocalParameter

301747
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Valyl_tRNA_Val_C5H10NOR
type: Species

309030
units: 756574
value: 999999.0
type: LocalParameter

303665
notes: Abbreviation: R_PAPA141 EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa141[c] --> M_12dgr141[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)
reversible: false
product: 797746
reactant: 797722
product: 797734
name: phosphatidate_phosphatase
kinetic law: 797758
fast: false
type: Reaction
reactant: 797709

775407
stoichiometry: 1.0
species: 300990
type: SpeciesReference

765293
stoichiometry: 1.0
species: 300833
type: SpeciesReference

310305
units: 756574
value: -999999.0
type: LocalParameter

310458
units: 756622
value: 0.0
type: LocalParameter

306009
units: 756622
value: 0.0
type: LocalParameter

308203
units: 756622
value: 0.0
type: LocalParameter

307501
value: 0.0
type: LocalParameter

307715
units: 756622
value: 0.0
type: LocalParameter

309432
units: 756574
value: 999999.0
type: LocalParameter

770023
stoichiometry: 1.0
species: 300338
type: SpeciesReference

760645
stoichiometry: 1.0
species: 301178
type: SpeciesReference

786440
stoichiometry: 1.0
species: 300911
type: SpeciesReference

805755
stoichiometry: 1.0
species: 300877
type: SpeciesReference

815565
stoichiometry: 1.0
species: 300761
type: SpeciesReference

780754
stoichiometry: 1.0
species: 301414
type: SpeciesReference

762769
stoichiometry: 1.0
species: 301583
type: SpeciesReference

307504
units: 756574
value: 0.0
type: LocalParameter

308636
value: 0.0
type: LocalParameter

309435
units: 756622
value: 0.0
type: LocalParameter

301958
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Thiamin_C12H17N4OS
type: Species

809788
stoichiometry: 1.0
species: 300913
type: SpeciesReference

308995
units: 756622
value: 0.0
type: LocalParameter

816570
stoichiometry: 1.0
species: 300256
type: SpeciesReference

303662
type: Reaction
reactant: 797649
kinetic law: 797697
notes: Abbreviation: R_PAPA140pp EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa140[c] --> M_12dgr140[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)
fast: false
name: phosphatidate_phosphatase
product: 797673
reversible: false
reactant: 797661
product: 797685

781370
stoichiometry: 1.0
species: 300520
type: SpeciesReference

306002
units: 756574
value: 999999.0
type: LocalParameter

308523
units: 756574
value: 0.0
type: LocalParameter

300907
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: H2O_H2O
type: Species

302089
product: 760682
fast: false
reactant: 760657
product: 760669
reactant: 760645
kinetic law: 760706
reversible: false
name: nitrate_reductase_(NADH)
product: 760694
notes: Abbreviation: R_1_7_1_1_mt EC Number: 1.7.1.1 SUBSYSTEM: AminoAcids_NitrogenMetabolism Equation: M_h[m] + M_no3[m] + M_nadh[m] --> M_h2o[m] + M_no2[m] + M_nad[m] genes: LOCUS:PF13_0353# proteins: GENE ASSOCIATION: (PF13_0353)
reactant: 760633
type: Reaction

781226
stoichiometry: 2.0
species: 301146
type: SpeciesReference

301743
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Valine_C5H11NO2
type: Species

764208
stoichiometry: 1.0
species: 300332
type: SpeciesReference

306874
units: 756574
value: -999999.0
type: LocalParameter

310456
value: 0.0
type: LocalParameter

307719
value: 0.0
type: LocalParameter

775552
stoichiometry: 1.0
species: 300440
type: SpeciesReference

308637
units: 756622
value: 0.0
type: LocalParameter

766933
stoichiometry: 1.0
species: 300829
type: SpeciesReference

307717
units: 756574
value: 999999.0
type: LocalParameter

307503
units: 756622
value: 0.0
type: LocalParameter

301304
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Pyridoxine_5_phosphate_C8H10NO6P
type: Species

808108
stoichiometry: 1.0
species: 301186
type: SpeciesReference

301745
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Valine_C5H11NO2
type: Species

308770
units: 756574
value: 0.0
type: LocalParameter

308996
units: 756574
value: -999999.0
type: LocalParameter

791032
stoichiometry: 1.0
species: 300911
type: SpeciesReference

306003
value: 0.0
type: LocalParameter

304631
kinetic law: 815290
product: 815277
reactant: 815265
notes: Abbreviation: R_ALALtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_ala_L[m] <==> M_ala_L[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_ALALtmt
type: Reaction

300012
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1_octadec_11_enoyl_sn_glycerol_3_phosphate_C21H39O7P1
type: Species

760924
stoichiometry: 1.0
species: 301386
type: SpeciesReference

301671
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: tRNA_Phe_R
type: Species

310455
units: 756574
value: 999999.0
type: LocalParameter

787821
stoichiometry: 1.0
species: 300851
type: SpeciesReference

762541
stoichiometry: 1.0
species: 300783
type: SpeciesReference

308638
units: 756574
value: 0.0
type: LocalParameter

307506
value: 0.0
type: LocalParameter

308997
units: 756574
value: 999999.0
type: LocalParameter

301956
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Succinate_C4H4O4
type: Species

300905
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: H2O_H2O
type: Species

800437
stoichiometry: 1.0
species: 300560
type: SpeciesReference

304355
kinetic law: 811324
product: 811311
reactant: 811298
notes: Abbreviation: R_PHEMEtap EC Number: SUBSYSTEM: Transport_AP Equation: M_pheme[ap] <==> M_pheme[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_PHEMEtap
type: Reaction

302087
reversible: false
type: Reaction
kinetic law: 760621
reactant: 760585
product: 760597
product: 760609
fast: false
notes: Abbreviation: R_FMETDF EC Number: 3.5.1.31 SUBSYSTEM: AminoAcids_MetPolyamineMetabolism Equation: M_fmet[c] + M_h2o[c] --> M_for[c] + M[m] et_L[c] genes: LOCUS:PFI0380c# proteins: GENE ASSOCIATION: (PFI0380c)
name: formylmethionine_deformylase
reactant: 760573

308525
units: 756574
value: 999999.0
type: LocalParameter

765557
stoichiometry: 1.0
species: 301567
type: SpeciesReference

303257
type: Reaction
product: 788184
name: glycerophosphodiester_phosphodiesterase
kinetic law: 788208
reversible: false
product: 788172
reactant: 788148
notes: Abbreviation: R_GPDDA4 EC Number: 3.1.4.46 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism Equation: M_g3pg[c] + M_h2o[c] --> M_glyc[c] + M_glyc3p[c] + M_h[c] genes: LOCUS:PF14_0060# proteins: GENE ASSOCIATION: (PF14_0060)
reactant: 788160
product: 788196
fast: false

809063
stoichiometry: 1.0
species: 300913
type: SpeciesReference

306004
units: 756622
value: 0.0
type: LocalParameter

760309
stoichiometry: 1.0
species: 301669
type: SpeciesReference

773893
stoichiometry: 1.0
species: 301928
type: SpeciesReference

309437
units: 756574
value: 999999.0
type: LocalParameter

814056
stoichiometry: 1.0
species: 300484
type: SpeciesReference

301741
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: UTP_C9H11N2O15P3
type: Species

785823
stoichiometry: 1.0
species: 301280
type: SpeciesReference

807285
stoichiometry: 1.0
species: 300795
type: SpeciesReference

771511
stoichiometry: 1.0
species: 300490
type: SpeciesReference

306876
units: 756574
value: 999999.0
type: LocalParameter

307505
units: 756574
value: 999999.0
type: LocalParameter

303899
reactant: 802636
type: Reaction
fast: false
reversible: false
kinetic law: 802696
notes: Abbreviation: R_RNDR3 EC Number: 1.17.4.1 SUBSYSTEM: Nucleotides_PyrimidineMetabolism ; Nucleotides_PurineMetabolism ; Redox_RedoxMetabolism Equation: M[c] dp[c] + M_trdrd[c] --> M_dcdp[c] + M_h2o[c] + M_trdox[c] genes: LOCUS:PF10_0154# LOCUS:PF14_0053# LOCUS:PF14_0352# proteins: GENE ASSOCIATION: (PF10_0154) or (PF14_0053) or (PF14_0352)
product: 802684
name: ribonucleoside-diphosphate_reductase
product: 802660
reactant: 802648
product: 802672

309769
value: 0.0
type: LocalParameter

309436
units: 756574
value: -999999.0
type: LocalParameter

811484
stoichiometry: 1.0
species: 301426
type: SpeciesReference

301302
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
type: Species

308526
value: 0.0
type: LocalParameter

306005
units: 756574
value: 0.0
type: LocalParameter

310309
units: 756622
value: 0.0
type: LocalParameter

302199
kinetic law: 764280
product: 764268
reactant: 764256
notes: Abbreviation: R_RPE EC Number: 5.1.3.1 SUBSYSTEM: Carbohydrates_PentosePhosphateCycle Equation: M_ru5p_D[c] <==> M_xu5p_D[c] genes: LOCUS:PFL0960w# proteins: GENE ASSOCIATION: (PFL0960w)
fast: false
reversible: true
name: Ribulose-phosphate_3-epimerase
type: Reaction

308772
units: 756574
value: 999999.0
type: LocalParameter

769527
stoichiometry: 1.0
species: 300414
type: SpeciesReference

795902
stoichiometry: 1.0
species: 301416
type: SpeciesReference

770892
stoichiometry: 1.0
species: 301390
type: SpeciesReference

304933
value: 0.0
type: LocalParameter

804118
stoichiometry: 1.0
species: 300428
type: SpeciesReference

758945
stoichiometry: 1.0
species: 300346
type: SpeciesReference

300010
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: 1_octadec_11_enoyl_sn_glycerol_3_phosphate_C21H39O7P1
type: Species

306877
value: 0.0
type: LocalParameter

310453
units: 756574
value: -999999.0
type: LocalParameter

305159
units: 756574
value: 0.0
type: LocalParameter

306548
value: 0.0
type: LocalParameter

806914
stoichiometry: 1.0
species: 300701
type: SpeciesReference

309191
value: 0.0
type: LocalParameter

805791
stoichiometry: 2.0
species: 300883
type: SpeciesReference

303431
name: phospholipase_A2
type: Reaction
notes: Abbreviation: R_PLIPA2E180pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pe180[c] --> M_1agpe180[c] + M_h[c] + M_ocdca[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
product: 792470
fast: false
reversible: false
product: 792482
product: 792458
kinetic law: 792494
reactant: 792434
reactant: 792446

307288
units: 756574
value: 0.0
type: LocalParameter

301537
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Seryl_tRNA_Ser_C3H6NO2R
type: Species

804263
stoichiometry: 1.0
species: 301390
type: SpeciesReference

304316
type: Reaction
kinetic law: 810848
notes: Abbreviation: R_VALt2r EC Number: SUBSYSTEM: Transport_aa Equation: M_h[e] + M_val_L[e] <==> M_h[c] + M_val_L[c] genes: LOCUS:PFF1430c# LOCUS:PFL0420w# LOCUS:PFL1515c# LOCUS:PFB0435c# LOCUS:PFE0775c# LOCUS:PF11_0334# proteins: GENE ASSOCIATION: (PFF1430c) or (PFL0420w) or (PFL1515c) or (PFB0435c) or (PFE0775c) or (PF11_0334)
reactant: 810799
product: 810836
product: 810824
name: R_VALt2r
fast: false
reactant: 810811
reversible: true

307711
units: 756574
value: 0.0
type: LocalParameter

300240
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: N_R_4_Phosphopantothenoyl_L_cysteine_C12H20N2O9PS
type: Species

310291
value: 0.0
type: LocalParameter

802019
stoichiometry: 2.0
species: 300911
type: SpeciesReference

773200
stoichiometry: 1.0
species: 301890
type: SpeciesReference

802311
stoichiometry: 1.0
species: 300682
type: SpeciesReference

794443
stoichiometry: 1.0
species: 301362
type: SpeciesReference

780544
stoichiometry: 1.0
species: 300937
type: SpeciesReference

779512
stoichiometry: 1.0
species: 300909
type: SpeciesReference

306547
units: 756574
value: 999999.0
type: LocalParameter

308218
value: 0.0
type: LocalParameter

307289
units: 756574
value: 999999.0
type: LocalParameter

812743
stoichiometry: 1.0
species: 300426
type: SpeciesReference

789619
stoichiometry: 1.0
species: 300903
type: SpeciesReference

307712
units: 756574
value: 999999.0
type: LocalParameter

769661
stoichiometry: 1.0
species: 300072
type: SpeciesReference

770313
stoichiometry: 1.0
species: 300518
type: SpeciesReference

300598
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: Dodecanoyl_CoA_n_C120CoA_C33H54N7O17P3S
type: Species

302614
kinetic law: 773575
product: 773563
reactant: 773551
notes: Abbreviation: R_EX_nicotinamide1 EC Number: SUBSYSTEM: Exchange Equation: [e] : M_ncam <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_nicotinamide1
type: Reaction

768703
stoichiometry: 1.0
species: 300372
type: SpeciesReference

301535
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Serine_C3H7NO3
type: Species

768583
stoichiometry: 1.0
species: 301416
type: SpeciesReference

300354
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: L_Alanine_C3H7NO2
type: Species

308217
units: 756574
value: 999999.0
type: LocalParameter

301539
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Seryl_tRNA_Sec_C3H6NO2R
type: Species

309751
units: 756574
value: 999999.0
type: LocalParameter

808942
stoichiometry: 1.0
species: 300841
type: SpeciesReference

800703
stoichiometry: 1.0
species: 300608
type: SpeciesReference

309193
units: 756622
value: 0.0
type: LocalParameter

781948
stoichiometry: 1.0
species: 300270
type: SpeciesReference

796287
stoichiometry: 1.0
species: 301186
type: SpeciesReference

783571
stoichiometry: 1.0
species: 300522
type: SpeciesReference

306859
units: 756574
value: 999999.0
type: LocalParameter

310293
units: 756622
value: 0.0
type: LocalParameter

300242
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: 5_Amino_4_oxopentanoate_C5H9NO3
type: Species

309194
units: 756574
value: -999999.0
type: LocalParameter

764352
stoichiometry: 1.0
species: 300699
type: SpeciesReference

306549
units: 756622
value: 0.0
type: LocalParameter

302491
kinetic law: 772005
product: 771993
reactant: 771981
notes: Abbreviation: R_EX_f6p_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_f6p <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_f6p_e_
type: Reaction

307130
units: 756622
value: 0.0
type: LocalParameter

309752
value: 0.0
type: LocalParameter

779452
stoichiometry: 1.0
species: 301134
type: SpeciesReference

812464
stoichiometry: 1.0
species: 301018
type: SpeciesReference

307710
units: 756622
value: 0.0
type: LocalParameter

809908
stoichiometry: 1.0
species: 301002
type: SpeciesReference

304313
reactant: 810750
product: 810762
name: R_TYRt2r
type: Reaction
reversible: true
reactant: 810738
kinetic law: 810787
notes: Abbreviation: R_TYRt2r EC Number: SUBSYSTEM: Transport_aa Equation: M_h[e] + M_tyr_L[e] <==> M_h[c] + M_tyr_L[c] genes: LOCUS:PFF1430c# LOCUS:PFL0420w# LOCUS:PFL1515c# LOCUS:PFB0435c# LOCUS:PFE0775c# LOCUS:PF11_0334# proteins: GENE ASSOCIATION: (PFF1430c) or (PFL0420w) or (PFL1515c) or (PFB0435c) or (PFE0775c) or (PF11_0334)
fast: false
product: 810774

302271
kinetic law: 766729
product: 766717
product: 766704
reactant: 766692
notes: Abbreviation: R_PTHPS EC Number: 4.2.3.12 SUBSYSTEM: Cofactors_FolateBiosynthesis Equation: M_ahdt[c] --> M_6pthp[c] + M_pppi[c] genes: LOCUS:PFF1360w# proteins: GENE ASSOCIATION: (PFF1360w)
fast: false
reversible: false
name: 6-pyruvoyltetrahydropterin_synthase
type: Reaction

802129
stoichiometry: 1.0
species: 300436
type: SpeciesReference

818043
stoichiometry: 0.02095
species: 301687
type: SpeciesReference

300596
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Dodecanoate_n_C120_C12H23O2
type: Species

768436
stoichiometry: 4.0
species: 300512
type: SpeciesReference

306858
units: 756574
value: -999999.0
type: LocalParameter

808240
stoichiometry: 1.0
species: 301258
type: SpeciesReference

758849
stoichiometry: 1.0
species: 301533
type: SpeciesReference

310294
units: 756574
value: 0.0
type: LocalParameter

768727
stoichiometry: 1.0
species: 300911
type: SpeciesReference

816425
stoichiometry: 1.0
species: 301567
type: SpeciesReference

788667
stoichiometry: 1.0
species: 300903
type: SpeciesReference

300356
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: L_Alanine_C3H7NO2
type: Species

308788
units: 756574
value: 999999.0
type: LocalParameter

782443
stoichiometry: 1.0
species: 300520
type: SpeciesReference

781068
stoichiometry: 1.0
species: 300566
type: SpeciesReference

770277
stoichiometry: 1.0
species: 300190
type: SpeciesReference

305155
value: 0.0
type: LocalParameter

306544
units: 756622
value: 0.0
type: LocalParameter

310295
units: 756574
value: 999999.0
type: LocalParameter

780447
stoichiometry: 1.0
species: 300520
type: SpeciesReference

798401
stoichiometry: 1.0
species: 300326
type: SpeciesReference

302617
kinetic law: 773612
product: 773599
reactant: 773587
notes: Abbreviation: R_EX_no_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_no <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_no_e_
type: Reaction

306857
units: 756622
value: 0.0
type: LocalParameter

302497
kinetic law: 772078
product: 772065
reactant: 772053
notes: Abbreviation: R_EX_folate1 EC Number: SUBSYSTEM: Exchange Equation: [e] : M_6hmhpt <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_folate1
type: Reaction

778123
stoichiometry: 1.0
species: 300909
type: SpeciesReference

306543
value: 0.0
type: LocalParameter

306430
units: 756574
value: -999999.0
type: LocalParameter

765593
stoichiometry: 1.0
species: 301569
type: SpeciesReference

306757
units: 756574
value: -999999.0
type: LocalParameter

308787
units: 756574
value: 0.0
type: LocalParameter

783391
stoichiometry: 1.0
species: 300522
type: SpeciesReference

303434
name: phospholipase_A2
product: 792555
reactant: 792518
product: 792542
kinetic law: 792567
fast: false
reversible: false
reactant: 792506
product: 792530
notes: Abbreviation: R_PLIPA2E181pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pe181[c] --> M_1agpe181[c] + M_h[c] + M_ocdcea[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
type: Reaction

300358
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Alanyl_tRNA_Ala_C3H6NOR
type: Species

787145
stoichiometry: 1.0
species: 301533
type: SpeciesReference

764653
stoichiometry: 1.0
species: 300292
type: SpeciesReference

759355
stoichiometry: 1.0
species: 300518
type: SpeciesReference

760852
stoichiometry: 3.0
species: 301132
type: SpeciesReference

769805
stoichiometry: 1.0
species: 300338
type: SpeciesReference

781671
stoichiometry: 3.0
species: 300909
type: SpeciesReference

301318
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: phosphatidylethanolamine_dihexadecanoyl_n_C160_C37H74N1O8P1
type: Species

306433
value: 0.0
type: LocalParameter

790947
stoichiometry: 1.0
species: 300911
type: SpeciesReference

784343
stoichiometry: 0.01
species: 301462
type: SpeciesReference

302494
kinetic law: 772041
product: 772029
reactant: 772017
notes: Abbreviation: R_EX_fe2_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_fe2 <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_fe2_e_
type: Reaction

308786
units: 756622
value: 0.0
type: LocalParameter

767294
stoichiometry: 1.0
species: 301160
type: SpeciesReference

303437
product: 792615
reversible: false
product: 792627
kinetic law: 792639
product: 792603
name: phospholipase_A2
reactant: 792579
fast: false
reactant: 792591
type: Reaction
notes: Abbreviation: R_PLIPA2G120pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pg120[c] --> M_1agpg120[c] + M_ddca[c] + M_h[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)

789340
stoichiometry: 1.0
species: 300775
type: SpeciesReference

780032
stoichiometry: 1.0
species: 301134
type: SpeciesReference

310297
value: 0.0
type: LocalParameter

790115
stoichiometry: 1.0
species: 300100
type: SpeciesReference

786149
stoichiometry: 1.0
species: 300911
type: SpeciesReference

801235
stoichiometry: 1.0
species: 301416
type: SpeciesReference

304319
kinetic law: 810885
product: 810872
reactant: 810860
notes: Abbreviation: R_DPCOAtap EC Number: SUBSYSTEM: Transport_AP Equation: M_dpcoa[ap] <==> M_dpcoa[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_DPCOAtap
type: Reaction

306855
value: 0.0
type: LocalParameter

796638
stoichiometry: 1.0
species: 300376
type: SpeciesReference

759465
stoichiometry: 1.0
species: 301138
type: SpeciesReference

781923
stoichiometry: 1.0
species: 300849
type: SpeciesReference

306432
units: 756574
value: 999999.0
type: LocalParameter

787518
stoichiometry: 1.0
species: 300510
type: SpeciesReference

760960
stoichiometry: 1.0
species: 301374
type: SpeciesReference

813958
stoichiometry: 1.0
species: 300913
type: SpeciesReference

306759
units: 756574
value: 999999.0
type: LocalParameter

306545
units: 756574
value: -999999.0
type: LocalParameter

808676
stoichiometry: 1.0
species: 300913
type: SpeciesReference

774910
stoichiometry: 1.0
species: 301984
type: SpeciesReference

309190
units: 756574
value: 999999.0
type: LocalParameter

305158
units: 756622
value: 0.0
type: LocalParameter

310298
units: 756622
value: 0.0
type: LocalParameter

301751
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Xanthine_C5H4N4O2
type: Species

761696
stoichiometry: 1.0
species: 301679
type: SpeciesReference

757337
stoichiometry: 1.0
species: 300829
type: SpeciesReference

306854
units: 756574
value: 999999.0
type: LocalParameter

757554
stoichiometry: 1.0
species: 300414
type: SpeciesReference

782335
stoichiometry: 1.0
species: 300290
type: SpeciesReference

309199
units: 756574
value: -999999.0
type: LocalParameter

310299
units: 756574
value: 0.0
type: LocalParameter

805852
stoichiometry: 1.0
species: 300877
type: SpeciesReference

775660
stoichiometry: 1.0
species: 301334
type: SpeciesReference

300248
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: 5_Amino_4_oxopentanoate_C5H9NO3
type: Species

770748
stoichiometry: 1.0
species: 300332
type: SpeciesReference

792723
stoichiometry: 1.0
species: 300903
type: SpeciesReference

801514
stoichiometry: 1.0
species: 301509
type: SpeciesReference

304817
units: 756574
value: 0.0
type: LocalParameter

307280
value: 0.0
type: LocalParameter

788244
stoichiometry: 1.0
species: 300855
type: SpeciesReference

791358
stoichiometry: 1.0
species: 300903
type: SpeciesReference

793284
stoichiometry: 1.0
species: 301350
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795480
stoichiometry: 1.0
species: 301416
type: SpeciesReference

305486
units: 756574
value: 999999.0
type: LocalParameter

798762
stoichiometry: 1.0
species: 300370
type: SpeciesReference

779911
stoichiometry: 1.0
species: 300422
type: SpeciesReference

309319
units: 756622
value: 0.0
type: LocalParameter

306435
units: 756574
value: -999999.0
type: LocalParameter

778279
stoichiometry: 1.0
species: 300909
type: SpeciesReference

307135
units: 756622
value: 0.0
type: LocalParameter

308897
units: 756574
value: 0.0
type: LocalParameter

306540
units: 756574
value: -999999.0
type: LocalParameter

763917
stoichiometry: 1.0
species: 301148
type: SpeciesReference

784956
stoichiometry: 1.0
species: 300901
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760743
stoichiometry: 1.0
species: 301150
type: SpeciesReference

813253
stoichiometry: 1.0
species: 301014
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786039
stoichiometry: 1.0
species: 301416
type: SpeciesReference

300590
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: Dodecanoyl_ACP_n_C120ACP_C23H43N2O8PRS
type: Species

780658
stoichiometry: 1.0
species: 301414
type: SpeciesReference

304818
units: 756574
value: 999999.0
type: LocalParameter

310187
value: 0.0
type: LocalParameter

764762
stoichiometry: 1.0
species: 300370
type: SpeciesReference

302277
reactant: 766897
product: 766921
kinetic law: 766945
fast: false
name: aminodeoxychorismate_synthase
notes: Abbreviation: R_ADCS EC Number: 2.6.1.85 SUBSYSTEM: Cofactors_FolateBiosynthesis Equation: M[c] hor[c] + M_gln_L[c] --> M_4adcho[c] + M_glu_L[c] genes: LOCUS:PFI1100w# proteins: GENE ASSOCIATION: (PFI1100w)
reactant: 766909
product: 766933
type: Reaction
reversible: false

308896
units: 756622
value: 0.0
type: LocalParameter

305903
units: 756574
value: 999999.0
type: LocalParameter

306648
units: 756574
value: -999999.0
type: LocalParameter

301649
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: tRNA_Asn_C10H17O10PR2
type: Species

306434
units: 756622
value: 0.0
type: LocalParameter

307136
units: 756574
value: 0.0
type: LocalParameter

777300
stoichiometry: 1.0
species: 300146
type: SpeciesReference

770121
stoichiometry: 2.0
species: 300416
type: SpeciesReference

765990
stoichiometry: 1.0
species: 300240
type: SpeciesReference

310188
units: 756622
value: 0.0
type: LocalParameter

814623
stoichiometry: 1.0
species: 301757
type: SpeciesReference

307282
units: 756622
value: 0.0
type: LocalParameter

307137
units: 756574
value: 999999.0
type: LocalParameter

767185
stoichiometry: 1.0
species: 301442
type: SpeciesReference

306437
units: 756574
value: 999999.0
type: LocalParameter

813410
stoichiometry: 1.0
species: 301737
type: SpeciesReference

302908
name: enoyl-[acyl-carrier-protein]_reductase_(NADH)
fast: false
reactant: 779875
reactant: 779887
type: Reaction
reactant: 779899
product: 779911
kinetic law: 779936
product: 779924
notes: Abbreviation: R_EAR40x_ap EC Number: 1.3.1.9 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_but2eACP[ap] + M_h[ap] + M_nadh[ap] --> M_butACP[ap] + M_nad[ap] genes: LOCUS:PFF0730c# proteins: GENE ASSOCIATION: (PFF0730c)
reversible: false

784692
stoichiometry: 1.0
species: 300909
type: SpeciesReference

305266
units: 756622
value: 0.0
type: LocalParameter

305040
units: 756622
value: 0.0
type: LocalParameter

304760
kinetic law: 816943
product: 816931
reactant: 816919
notes: Abbreviation: R_HBtr EC Number: SUBSYSTEM: Transport Equation: M_hb[e] --> M_hb[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: false
name: R_HBtr
type: Reaction

306542
units: 756574
value: 999999.0
type: LocalParameter

790838
stoichiometry: 1.0
species: 300040
type: SpeciesReference

773310
stoichiometry: 1.0
species: 301896
type: SpeciesReference

810341
stoichiometry: 1.0
species: 300821
type: SpeciesReference

305489
value: 0.0
type: LocalParameter

307283
units: 756574
value: 0.0
type: LocalParameter

304816
units: 756622
value: 0.0
type: LocalParameter

798835
stoichiometry: 1.0
species: 300903
type: SpeciesReference

777724
stoichiometry: 1.0
species: 301146
type: SpeciesReference

301860
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Reduced_glutathione_C10H16N3O6S
type: Species

305900
units: 756574
value: -999999.0
type: LocalParameter

310189
units: 756574
value: 0.0
type: LocalParameter

813849
stoichiometry: 1.0
species: 301154
type: SpeciesReference

308894
value: 0.0
type: LocalParameter

309318
value: 0.0
type: LocalParameter

302279
reactant: 766969
reversible: false
fast: false
notes: Abbreviation: R_NADK EC Number: 2.7.1.23 SUBSYSTEM: Cofactors_NicotinateNicotinamideMetabolism Equation: M_atp[c] + M_nad[c] --> M_adp[c] + M_h[c] + M_nadp[c] genes: proteins: GENE ASSOCIATION:
kinetic law: 767017
reactant: 766957
product: 766981
name: NAD+_kinase
type: Reaction
product: 767005
product: 766993

793380
stoichiometry: 1.0
species: 300502
type: SpeciesReference

305267
units: 756574
value: 0.0
type: LocalParameter

304208
reactant: 808688
notes: Abbreviation: R_SPMDt2 EC Number: SUBSYSTEM: Transport Equation: M_h[e] + M_spmd[e] --> M_h[c] + M_spmd[c] genes: proteins: GENE ASSOCIATION:
name: R_SPMDt2
type: Reaction
product: 808700
fast: false
reactant: 808676
product: 808712
kinetic law: 808724
reversible: false

305041
units: 756574
value: 0.0
type: LocalParameter

818116
stoichiometry: 59.81
species: 300332
type: SpeciesReference

307138
value: 0.0
type: LocalParameter

301645
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: tRNA_Ala_R
type: Species

816533
stoichiometry: 1.0
species: 301340
type: SpeciesReference

305482
units: 756622
value: 0.0
type: LocalParameter

775105
stoichiometry: 1.0
species: 300933
type: SpeciesReference

757265
stoichiometry: 1.0
species: 300404
type: SpeciesReference

300244
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 5_Amino_4_oxopentanoate_C5H9NO3
type: Species

810774
stoichiometry: 1.0
species: 301707
type: SpeciesReference

301980
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Xanthine_C5H4N4O2
type: Species

759198
stoichiometry: 1.0
species: 301040
type: SpeciesReference

789499
stoichiometry: 1.0
species: 300777
type: SpeciesReference

305042
units: 756574
value: 999999.0
type: LocalParameter

779344
stoichiometry: 1.0
species: 301128
type: SpeciesReference

307602
units: 756574
value: -999999.0
type: LocalParameter

812574
stoichiometry: 1.0
species: 301344
type: SpeciesReference

306439
units: 756622
value: 0.0
type: LocalParameter

307284
units: 756574
value: 999999.0
type: LocalParameter

304067
kinetic law: 806504
product: 806492
reactant: 806479
notes: Abbreviation: R_ACALDt EC Number: SUBSYSTEM: Transport Equation: M_acald[e] <==> M_acald[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_ACALDt
type: Reaction

307131
units: 756574
value: 0.0
type: LocalParameter

806805
stoichiometry: 1.0
species: 300514
type: SpeciesReference

309195
units: 756574
value: 999999.0
type: LocalParameter

308663
value: 0.0
type: LocalParameter

305483
units: 756574
value: -999999.0
type: LocalParameter

815879
stoichiometry: 1.0
species: 300915
type: SpeciesReference

815145
stoichiometry: 1.0
species: 300244
type: SpeciesReference

771438
stoichiometry: 1.0
species: 300476
type: SpeciesReference

770422
stoichiometry: 1.0
species: 301479
type: SpeciesReference

300350
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: 2_Oxoglutarate_C5H4O5
type: Species

310183
units: 756622
value: 0.0
type: LocalParameter

300594
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Dodecanoate_n_C120_C12H23O2
type: Species

769552
stoichiometry: 1.0
species: 300370
type: SpeciesReference

762408
stoichiometry: 1.0
species: 301136
type: SpeciesReference

302273
product: 766777
notes: Abbreviation: R_THFGLUS EC Number: 6.3.2.17 SUBSYSTEM: Cofactors_FolateBiosynthesis Equation: M_atp[c] + M_glu_L[c] + M_thf[c] <==> M_adp[c] + M_h[c] + M_pi[c] + M_thfglu[c] genes: LOCUS:PF13_0140# proteins: GENE ASSOCIATION: (PF13_0140)
product: 766813
kinetic law: 766825
name: tetrahydrofolate_synthase
reversible: true
reactant: 766753
reactant: 766741
product: 766789
reactant: 766765
product: 766801
fast: false
type: Reaction

765713
stoichiometry: 1.0
species: 300911
type: SpeciesReference

794973
stoichiometry: 1.0
species: 300903
type: SpeciesReference

307132
units: 756574
value: 999999.0
type: LocalParameter

307285
value: 0.0
type: LocalParameter

306438
value: 0.0
type: LocalParameter

308662
units: 756574
value: 999999.0
type: LocalParameter

779669
stoichiometry: 1.0
species: 301134
type: SpeciesReference

804058
stoichiometry: 1.0
species: 301741
type: SpeciesReference

303587
type: Reaction
product: 796022
product: 796010
kinetic law: 796034
fast: false
name: trans-pentaprenyltranstransferase
reversible: false
notes: Abbreviation: R_PPTT_mt EC Number: 2.5.1.33 SUBSYSTEM: Lipids_TerpenoidMetabolism Equation: M_ipdp[m] + M_pendp[m] --> M_hexdp[m] + M_ppi[m] genes: LOCUS:PFB0130w# proteins: GENE ASSOCIATION: (PFB0130w)
reactant: 795998
reactant: 795986

812852
stoichiometry: 1.0
species: 300911
type: SpeciesReference

814080
stoichiometry: 1.0
species: 301390
type: SpeciesReference

817162
stoichiometry: 3.0
species: 301687
type: SpeciesReference

300246
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: 5_Amino_4_oxopentanoate_C5H9NO3
type: Species

771800
stoichiometry: 1.0
species: 300596
type: SpeciesReference

769963
stoichiometry: 1.0
species: 300915
type: SpeciesReference

310184
units: 756574
value: 0.0
type: LocalParameter

301982
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Xanthosine_5_phosphate_C10H11N4O9P
type: Species

307600
value: 0.0
type: LocalParameter

790693
stoichiometry: 1.0
species: 300036
type: SpeciesReference

304205
kinetic law: 808664
product: 808651
reactant: 808639
notes: Abbreviation: R_SO4ti EC Number: SUBSYSTEM: Transport Equation: M_so4[e] --> M_so4[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: false
name: R_SO4ti
type: Reaction

783680
stoichiometry: 1.0
species: 300292
type: SpeciesReference

309197
value: 0.0
type: LocalParameter

307133
value: 0.0
type: LocalParameter

800812
stoichiometry: 1.0
species: 300903
type: SpeciesReference

310185
units: 756574
value: 999999.0
type: LocalParameter

300352
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Alanine_C3H7NO2
type: Species

791226
stoichiometry: 1.0
species: 300777
type: SpeciesReference

802756
stoichiometry: 1.0
species: 301637
type: SpeciesReference

309198
units: 756622
value: 0.0
type: LocalParameter

300592
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: Dodecanoate_n_C120_C12H23O2
type: Species

759898
stoichiometry: 1.0
species: 301046
type: SpeciesReference

302275
product: 766861
kinetic law: 766885
reactant: 766837
product: 766849
product: 766873
reversible: false
type: Reaction
name: aminodeoxychorismate_lyase
fast: false
notes: Abbreviation: R_ADCL EC Number: 4.1.3.38 SUBSYSTEM: Cofactors_ShikimateBiosynthesis Equation: M_4adcho[c] --> M_4abz[c] + M_h[c] + M_pyr[c] genes: LOCUS:PFI1100w# proteins: GENE ASSOCIATION: (PFI1100w)

307601
units: 756622
value: 0.0
type: LocalParameter

305045
value: 0.0
type: LocalParameter

308898
units: 756574
value: 999999.0
type: LocalParameter

301647
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: tRNA_Arg_R
type: Species

307287
units: 756622
value: 0.0
type: LocalParameter

308660
units: 756574
value: 0.0
type: LocalParameter

308666
units: 756574
value: 0.0
type: LocalParameter

303656
reactant: 797538
fast: false
product: 797550
notes: Abbreviation: R_PAPA120pp EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa120[c] --> M_12dgr120[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)
reactant: 797526
reversible: false
kinetic law: 797575
type: Reaction
product: 797563
name: phosphatidate_phosphatase

302059
fast: false
product: 759585
reversible: false
name: Valine-tRNA_ligase
reactant: 759549
reactant: 759573
reactant: 759561
kinetic law: 759621
notes: Abbreviation: R_VALTRS EC Number: 6.1.1.9 SUBSYSTEM: AminoAcids_LeuIleValMetabolism Equation: M_atp[c] + M_trnaval[c] + M_val_L[c] --> M_amp[c] + M_ppi[c] + M_valtrna[c] genes: LOCUS:PF14_0589# LOCUS:PFC0470w# proteins: GENE ASSOCIATION: (PF14_0589) or (PFC0470w)
product: 759597
type: Reaction
product: 759609

304962
units: 756574
value: 999999.0
type: LocalParameter

303398
kinetic law: 791699
fast: false
product: 791663
notes: Abbreviation: R_PLIPA2A140pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa140[c] --> M_1tdecg3p[c] + M_h[c] + M_ttdca[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
name: phospholipase_A2
product: 791687
reactant: 791638
reactant: 791650
product: 791675
type: Reaction
reversible: false

307914
units: 756574
value: 999999.0
type: LocalParameter

306652
units: 756622
value: 0.0
type: LocalParameter

310427
units: 756574
value: 999999.0
type: LocalParameter

309312
value: 0.0
type: LocalParameter

309465
units: 756574
value: 999999.0
type: LocalParameter

304214
kinetic law: 808821
product: 808809
reactant: 808797
notes: Abbreviation: R_TTDCAt EC Number: SUBSYSTEM: Transport Equation: M_ttdca[e] --> M_ttdca[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: false
name: R_TTDCAt
type: Reaction

310191
units: 756574
value: 999999.0
type: LocalParameter

760525
stoichiometry: 1.0
species: 300737
type: SpeciesReference

757773
stoichiometry: 1.0
species: 300839
type: SpeciesReference

776240
stoichiometry: 1.0
species: 300462
type: SpeciesReference

310313
value: 0.0
type: LocalParameter

786586
stoichiometry: 1.0
species: 300332
type: SpeciesReference

304649
kinetic law: 815517
product: 815505
reactant: 815493
notes: Abbreviation: R_DHORtmt EC Number: SUBSYSTEM: Transport_MT Equation: M_dhor_S[m] <==> M_dhor_S[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_DHORtmt
type: Reaction

780876
stoichiometry: 1.0
species: 300520
type: SpeciesReference

813108
stoichiometry: 1.0
species: 300688
type: SpeciesReference

782881
stoichiometry: 1.0
species: 300901
type: SpeciesReference

302914
notes: Abbreviation: R_EAR80x_ap EC Number: 1.3.1.9 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M_nadh[ap] + M_toct2eACP[ap] --> M_nad[ap] + M_ocACP[ap] genes: LOCUS:PFF0730c# proteins: GENE ASSOCIATION: (PFF0730c)
reactant: 780020
kinetic law: 780081
reactant: 780032
product: 780069
fast: false
reversible: false
name: enoyl-[acyl-carrier-protein]_reductase_(NADH)
type: Reaction
product: 780057
reactant: 780045

304754
notes: Abbreviation: R_PUNP8 EC Number: 2.4.2.1 SUBSYSTEM: AminoAcids_MetPolyamineMetabolism Equation: M_5mti[c] + M_pi[c] --> M_hxan[c] + M_5mtr1p[c] genes: LOCUS:PFE0660c# proteins: GENE ASSOCIATION: (PFE0660c)
reactant: 816823
product: 816847
reversible: false
fast: false
kinetic law: 816871
name: purine-nucleoside_phosphorylase
product: 816859
type: Reaction
reactant: 816835

303596
product: 796227
notes: Abbreviation: R_DESAT14 EC Number: 1.14.19.1 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h[c] + M_nadph[c] + M_o2[c] + M_tdcoa[c] --> (2.0) M_h2o[c] + M_nadp[c] + M_tdecoa[c] genes: LOCUS:PFE0555w# proteins: GENE ASSOCIATION: (PFE0555w)
product: 796239
fast: false
type: Reaction
reactant: 796179
reactant: 796167
reactant: 796191
kinetic law: 796251
reactant: 796203
name: stearoyl-CoA_9-desaturase
reversible: false
product: 796215

304961
units: 756574
value: 0.0
type: LocalParameter

765027
stoichiometry: 1.0
species: 301505
type: SpeciesReference

301868
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Hydrogen_peroxide_H2O2
type: Species

782190
stoichiometry: 1.0
species: 300270
type: SpeciesReference

766668
stoichiometry: 1.0
species: 301148
type: SpeciesReference

307913
units: 756574
value: 0.0
type: LocalParameter

765172
stoichiometry: 1.0
species: 300514
type: SpeciesReference

310426
units: 756574
value: -999999.0
type: LocalParameter

306653
units: 756574
value: -999999.0
type: LocalParameter

308667
units: 756574
value: 999999.0
type: LocalParameter

778823
stoichiometry: 1.0
species: 300270
type: SpeciesReference

798980
stoichiometry: 1.0
species: 300801
type: SpeciesReference

303284
product: 788836
type: Reaction
product: 788848
name: lysophospholipase
reversible: false
notes: Abbreviation: R_LPLIPAL1A180pp EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_1odecg3p[c] + M_h2o[c] --> M_glyc3p[c] + M_h[c] + M_ocdca[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
product: 788824
reactant: 788800
fast: false
reactant: 788812
kinetic law: 788860

309311
units: 756574
value: 999999.0
type: LocalParameter

308099
units: 756622
value: 0.0
type: LocalParameter

301984
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Xanthosine_C10H12N4O6
type: Species

758703
stoichiometry: 1.0
species: 301539
type: SpeciesReference

761396
stoichiometry: 1.0
species: 301531
type: SpeciesReference

310312
units: 756574
value: 999999.0
type: LocalParameter

805634
stoichiometry: 1.0
species: 301390
type: SpeciesReference

301641
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Reduced_thioredoxin_XH2
type: Species

795262
stoichiometry: 1.0
species: 300532
type: SpeciesReference

798618
stoichiometry: 1.0
species: 300028
type: SpeciesReference

307912
units: 756622
value: 0.0
type: LocalParameter

305909
units: 756622
value: 0.0
type: LocalParameter

304960
units: 756622
value: 0.0
type: LocalParameter

304064
reactant: 806419
reactant: 806431
name: R_ABUTt2r
type: Reaction
reversible: true
product: 806443
kinetic law: 806467
fast: false
notes: Abbreviation: R_ABUTt2r EC Number: SUBSYSTEM: Transport Equation: M_4abut[e] + M_h[e] <==> M_4abut[c] + M_h[c] genes: proteins: GENE ASSOCIATION:
product: 806455

305049
units: 756574
value: 0.0
type: LocalParameter

309463
units: 756574
value: -999999.0
type: LocalParameter

778979
stoichiometry: 1.0
species: 300006
type: SpeciesReference

310429
value: 0.0
type: LocalParameter

303287
name: lysophospholipase
reactant: 788872
kinetic law: 788932
reactant: 788884
reversible: false
product: 788920
type: Reaction
notes: Abbreviation: R_LPLIPAL1A181pp EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_1odec11eg3p[c] + M_h2o[c] --> M_glyc3p[c] + M_h[c] + M_ocdcea[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
product: 788896
fast: false
product: 788908

308519
units: 756574
value: 999999.0
type: LocalParameter

310316
units: 756574
value: -999999.0
type: LocalParameter

797156
stoichiometry: 1.0
species: 300048
type: SpeciesReference

809499
stoichiometry: 1.0
species: 300538
type: SpeciesReference

300130
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

303659
reactant: 797588
product: 797625
kinetic law: 797637
notes: Abbreviation: R_PAPA140 EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa140[c] --> M_12dgr140[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)
product: 797612
reactant: 797600
name: phosphatidate_phosphatase
fast: false
type: Reaction
reversible: false

817707
stoichiometry: 0.007106
species: 300727
type: SpeciesReference

758213
stoichiometry: 1.0
species: 300901
type: SpeciesReference

763286
stoichiometry: 1.0
species: 300332
type: SpeciesReference

307808
units: 756574
value: 0.0
type: LocalParameter

306655
units: 756574
value: 999999.0
type: LocalParameter

764074
stoichiometry: 1.0
species: 301509
type: SpeciesReference

305048
units: 756622
value: 0.0
type: LocalParameter

779128
stoichiometry: 1.0
species: 300270
type: SpeciesReference

308665
units: 756622
value: 0.0
type: LocalParameter

776927
stoichiometry: 1.0
species: 301146
type: SpeciesReference

309462
units: 756622
value: 0.0
type: LocalParameter

310315
units: 756622
value: 0.0
type: LocalParameter

306760
value: 0.0
type: LocalParameter

776350
stoichiometry: 1.0
species: 300536
type: SpeciesReference

310192
value: 0.0
type: LocalParameter

810172
stoichiometry: 1.0
species: 301084
type: SpeciesReference

783716
stoichiometry: 1.0
species: 300865
type: SpeciesReference

796976
stoichiometry: 1.0
species: 300042
type: SpeciesReference

301986
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: 4_Amino_5_hydroxymethyl_2_methylpyrimidine_C6H9N3O
type: Species

794757
stoichiometry: 1.0
species: 301354
type: SpeciesReference

301643
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299933
name: Reduced_thioredoxin_XH2
type: Species

308360
units: 756574
value: 999999.0
type: LocalParameter

307807
units: 756622
value: 0.0
type: LocalParameter

786258
stoichiometry: 1.0
species: 301416
type: SpeciesReference

303281
type: Reaction
name: lysophospholipase
product: 788764
reactant: 788727
kinetic law: 788788
reactant: 788739
fast: false
product: 788752
notes: Abbreviation: R_LPLIPAL1A161pp EC Number: 3.1.1.5 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_1hdec9eg3p[c] + M_h2o[c] --> M_glyc3p[c] + M_h[c] + M_hdcea[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
product: 788776
reversible: false

779016
stoichiometry: 1.0
species: 301274
type: SpeciesReference

308517
units: 756622
value: 0.0
type: LocalParameter

812028
stoichiometry: 1.0
species: 300598
type: SpeciesReference

301988
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Hemoglobin_R
type: Species

302055
reactant: 759429
kinetic law: 759477
name: R_OIVD3_mt
product: 759441
fast: false
reversible: false
product: 759453
notes: Abbreviation: R_OIVD3_mt EC Number: 1.2.4.4+2.3.1.168+1.8.1.4 (~1.2.1.25) SUBSYSTEM: AminoAcids_LeuIleValMetabolism Equation: M_3mop[m] + M[c] oa[m] + M_nad[m] --> M_2mbcoa[m] + M[c] o2[m] + M_nadh[m] genes: LOCUS:PFE0225w# LOCUS:PFC0170c# LOCUS:PF08_0066# LOCUS:PFL1550w# proteins: GENE ASSOCIATION: (PFE0225w) and (PFC0170c) and ((PF08_0066) or (PFL1550w))
reactant: 759417
type: Reaction
reactant: 759404
product: 759465

302269
kinetic law: 766680
product: 766656
reactant: 766632
reactant: 766644
reversible: true
fast: false
type: Reaction
name: methylenetetrahydrofolate_dehydrogenase_(NADP+)
notes: Abbreviation: R_MTHFD EC Number: 1.5.1.5 SUBSYSTEM: Cofactors_FolateBiosynthesis Equation: M[m] lthf[c] + M_nadp[c] <==> M[m] ethf[c] + M_nadph[c] genes: LOCUS:PFF1490w# proteins: GENE ASSOCIATION: (PFF1490w)
product: 766668

307910
value: 0.0
type: LocalParameter

304813
value: 0.0
type: LocalParameter

778400
stoichiometry: 1.0
species: 300184
type: SpeciesReference

306656
value: 0.0
type: LocalParameter

309316
units: 756574
value: 999999.0
type: LocalParameter

777192
stoichiometry: 1.0
species: 300158
type: SpeciesReference

807140
stoichiometry: 1.0
species: 300913
type: SpeciesReference

301862
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Guanine_C5H5N5O
type: Species

807562
stoichiometry: 1.0
species: 300905
type: SpeciesReference

785702
stoichiometry: 1.0
species: 299950
type: SpeciesReference

308361
value: 0.0
type: LocalParameter

300132
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

308094
units: 756574
value: 0.0
type: LocalParameter

309461
value: 0.0
type: LocalParameter

804484
stoichiometry: 1.0
species: 300628
type: SpeciesReference

771656
stoichiometry: 1.0
species: 300552
type: SpeciesReference

308518
units: 756574
value: 0.0
type: LocalParameter

309315
units: 756574
value: 0.0
type: LocalParameter

797240
stoichiometry: 1.0
species: 300382
type: SpeciesReference

301989
product: 756732
notes: Abbreviation: R_ARGN EC Number: 3.5.3.1 SUBSYSTEM: AminoAcids_ArgProMetabolism Equation: M_arg_L[c] + M_h2o[c] --> M_orn[c] + M_urea[c] genes: LOCUS:PFI0320w# proteins: GENE ASSOCIATION: (PFI0320w)
kinetic law: 756756
fast: false
reactant: 756708
reactant: 756720
product: 756744
reversible: false
name: arginase
type: Reaction

305260
units: 756574
value: 999999.0
type: LocalParameter

762625
stoichiometry: 1.0
species: 301495
type: SpeciesReference

304211
reversible: true
name: R_SUCCt2r
reactant: 808748
notes: Abbreviation: R_SUCCt2r EC Number: SUBSYSTEM: Transport Equation: M_h[e] + M_succ[e] <==> M_h[c] + M_succ[c] genes: proteins: GENE ASSOCIATION:
reactant: 808736
fast: false
product: 808773
type: Reaction
kinetic law: 808785
product: 808760

305906
value: 0.0
type: LocalParameter

308893
units: 756574
value: 999999.0
type: LocalParameter

306657
units: 756622
value: 0.0
type: LocalParameter

778570
stoichiometry: 1.0
species: 300176
type: SpeciesReference

760429
stoichiometry: 1.0
species: 300366
type: SpeciesReference

300026
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1_tetradecanoyl_sn_glycerol_3_phosphate_C17H33O7P1
type: Species

816751
stoichiometry: 1.0
species: 300250
type: SpeciesReference

775298
stoichiometry: 1.0
species: 300284
type: SpeciesReference

756805
stoichiometry: 1.0
species: 300370
type: SpeciesReference

303593
fast: false
type: Reaction
notes: Abbreviation: R_OCTDPS EC Number: SUBSYSTEM: Lipids_TerpenoidMetabolism Equation: M_frdp[c] + (5.0) M_ipdp[c] --> M_octdp[c] + (5.0) M_ppi[c] genes: proteins: GENE ASSOCIATION:
product: 796143
reactant: 796107
product: 796131
reversible: false
kinetic law: 796155
reactant: 796119
name: R_OCTDPS

766813
stoichiometry: 1.0
species: 301609
type: SpeciesReference

303860
notes: Abbreviation: R_PUNP7 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotides_PurineMetabolism ; AminoAcids_MetPolyamineMetabolism Equation: M_pi[c] + M_xtsn[c] <==> M_r1p[c] + M_xan[c] genes: LOCUS:PFE0660c# proteins: GENE ASSOCIATION: (PFE0660c)
reversible: true
reactant: 801730
product: 801754
type: Reaction
product: 801742
name: purine-nucleoside_phosphorylase
reactant: 801718
fast: false
kinetic law: 801766

305263
value: 0.0
type: LocalParameter

308515
value: 0.0
type: LocalParameter

309314
units: 756622
value: 0.0
type: LocalParameter

778075
stoichiometry: 1.0
species: 300270
type: SpeciesReference

308890
units: 756622
value: 0.0
type: LocalParameter

801694
stoichiometry: 1.0
species: 300984
type: SpeciesReference

809451
stoichiometry: 1.0
species: 300841
type: SpeciesReference

302917
product: 780131
product: 780155
product: 780143
name: Long-chain-fatty-acid-CoA_ligase
fast: false
reactant: 780119
type: Reaction
reversible: false
notes: Abbreviation: R_FACOAL100t2pp_ap EC Number: 6.2.1.3 SUBSYSTEM: Lipids_FattyAcidSynthesis ; Lipids_SphingomyelinCeramideMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_atp[ap] + M[c] oa[ap] + M_dca[ap] --> M_amp[ap] + M_dcacoa[ap] + M_ppi[ap] genes: LOCUS:MAL13P1_485# LOCUS:PF07_0129# LOCUS:PF14_0751# LOCUS:PF14_0761# LOCUS:PFB0685c# LOCUS:PFB0695c# LOCUS:PFC0050c# LOCUS:PFD0085c# LOCUS:PFE1250w# LOCUS:PFF0945c# LOCUS:PFL1880w# LOCUS:PFL2570w# proteins: GENE ASSOCIATION: (MAL13P1_485) or (PF07_0129) or (PF14_0751) or (PF14_0761) or (PFB0685c) or (PFB0695c) or (PFC0050c) or (PFD0085c) or (PFE1250w) or (PFF0945c) or (PFL1880w) or (PFL2570w)
reactant: 780106
kinetic law: 780167
reactant: 780094

302057
name: branched-chain-amino-acid_transaminase
fast: false
reactant: 759489
product: 759525
reversible: true
reactant: 759501
kinetic law: 759537
notes: Abbreviation: R_VALTA EC Number: 2.6.1.42 SUBSYSTEM: AminoAcids_LeuIleValMetabolism Equation: M_akg[c] + M_val_L[c] <==> M_3mob[c] + M_glu_L[c] genes: LOCUS:PF14_0557# proteins: GENE ASSOCIATION: (PF14_0557)
product: 759513
type: Reaction

304751
name: adenosine_deaminase
notes: Abbreviation: R_MTAADA EC Number: 3.5.4.4 SUBSYSTEM: AminoAcids_MetPolyamineMetabolism Equation: M_5mta[c] + M_h[c] + M_h2o[c] --> M_5mti[c] + M_nh4[c] genes: LOCUS:PF10_0289# proteins: GENE ASSOCIATION: (PF10_0289)
reactant: 816763
type: Reaction
reversible: false
reactant: 816751
fast: false
product: 816787
reactant: 816775
product: 816799
kinetic law: 816811

785630
stoichiometry: 1.0
species: 299946
type: SpeciesReference

306658
units: 756574
value: -999999.0
type: LocalParameter

308363
units: 756622
value: 0.0
type: LocalParameter

300134
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

791008
stoichiometry: 1.0
species: 300594
type: SpeciesReference

788510
stoichiometry: 1.0
species: 300026
type: SpeciesReference

307291
value: 0.0
type: LocalParameter

781105
stoichiometry: 2.0
species: 301146
type: SpeciesReference

757482
stoichiometry: 1.0
species: 300414
type: SpeciesReference

301864
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: H_H
type: Species

780349
stoichiometry: 1.0
species: 300412
type: SpeciesReference

799293
stoichiometry: 1.0
species: 301136
type: SpeciesReference

308096
units: 756574
value: 999999.0
type: LocalParameter

308669
value: 0.0
type: LocalParameter

800559
stoichiometry: 1.0
species: 300370
type: SpeciesReference

304810
units: 756574
value: 999999.0
type: LocalParameter

301866
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: H2O_H2O
type: Species

308891
units: 756574
value: 0.0
type: LocalParameter

767703
stoichiometry: 1.0
species: 300526
type: SpeciesReference

304061
notes: Abbreviation: R_DSBGGT EC Number: 5.3.4.1 SUBSYSTEM: Redox_RedoxMetabolism Equation: M_dsbgox[c] + (2.0) M_gthrd[c] --> M_dsbgrd[c] + M_gthox[c] genes: LOCUS:MAL8P1_17# LOCUS:PF11_0352# LOCUS:PF13_0272# LOCUS:PF14_0694# LOCUS:PFI0950w# proteins: GENE ASSOCIATION: (MAL8P1_17) or (PF11_0352) or (PF13_0272) or (PF14_0694) or (PFI0950w)
reversible: false
kinetic law: 806407
name: Protein_disulfide-isomerase
product: 806395
product: 806383
type: Reaction
reactant: 806359
fast: false
reactant: 806371

769224
stoichiometry: 1.0
species: 300332
type: SpeciesReference

308364
units: 756574
value: 0.0
type: LocalParameter

807298
stoichiometry: 1.0
species: 300793
type: SpeciesReference

785095
stoichiometry: 1.0
species: 300078
type: SpeciesReference

795830
stoichiometry: 1.0
species: 300867
type: SpeciesReference

761180
stoichiometry: 1.0
species: 300414
type: SpeciesReference

300028
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: _S_2_5_Amino_1_5_phospho_D_ribosyl_imidazole_4_carboxamidosuccinate_C13H15N4O12P
type: Species

804374
stoichiometry: 1.0
species: 300903
type: SpeciesReference

808398
stoichiometry: 1.0
species: 301473
type: SpeciesReference

310310
units: 756574
value: -999999.0
type: LocalParameter

308097
value: 0.0
type: LocalParameter

787966
stoichiometry: 1.0
species: 300851
type: SpeciesReference

817803
stoichiometry: 0.3405
species: 301036
type: SpeciesReference

794865
stoichiometry: 1.0
species: 301370
type: SpeciesReference

306864
units: 756574
value: 999999.0
type: LocalParameter

308090
units: 756574
value: 999999.0
type: LocalParameter

807671
stoichiometry: 1.0
species: 301030
type: SpeciesReference

301753
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Xanthosine_5_phosphate_C10H11N4O9P
type: Species

785859
stoichiometry: 1.0
species: 300414
type: SpeciesReference

802465
stoichiometry: 1.0
species: 300562
type: SpeciesReference

300136
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
type: Species

779236
stoichiometry: 1.0
species: 301134
type: SpeciesReference

308365
units: 756574
value: 999999.0
type: LocalParameter

306765
value: 0.0
type: LocalParameter

308783
units: 756574
value: 999999.0
type: LocalParameter

792880
stoichiometry: 1.0
species: 301354
type: SpeciesReference

796070
stoichiometry: 8.0
species: 301416
type: SpeciesReference

302051
reactant: 759234
type: Reaction
reactant: 759258
fast: false
product: 759270
notes: Abbreviation: R_OIVD1_mt EC Number: 1.2.4.4+2.3.1.168+1.8.1.4 (~1.2.1.25) SUBSYSTEM: AminoAcids_LeuIleValMetabolism Equation: M_4mop[m] + M[c] oa[m] + M_nad[m] <==> M[c] o2[m] + M_ivcoa[m] + M_nadh[m] genes: LOCUS:PFE0225w# LOCUS:PFC0170c# LOCUS:PF08_0066# LOCUS:PFL1550w# proteins: GENE ASSOCIATION: (PFE0225w) and (PFC0170c) and ((PF08_0066) or (PFL1550w))
name: R_OIVD1_mt
product: 759294
kinetic law: 759306
product: 759282
reactant: 759246
reversible: true

812137
stoichiometry: 1.0
species: 300534
type: SpeciesReference

308210
units: 756574
value: 0.0
type: LocalParameter

309758
value: 0.0
type: LocalParameter

304640
kinetic law: 815402
product: 815389
reactant: 815376
notes: Abbreviation: R_COAtmt EC Number: SUBSYSTEM: Transport_MT Equation: M[c] oa[m] <==> M[c] oa[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_COAtmt
type: Reaction

305152
units: 756574
value: 999999.0
type: LocalParameter

302831
reactant: 777941
reactant: 777966
reactant: 777953
reversible: false
name: beta-ketoacyl-acyl-carrier-protein_synthase_I
product: 777978
product: 778003
product: 777990
type: Reaction
kinetic law: 778015
fast: false
notes: Abbreviation: R_3OAS121_ap EC Number: 2.3.1.41 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M[c] dec3eACP[ap] + M_h[ap] + M[m] alACP[ap] --> M_3ocddec5eACP[ap] + M_ACP[ap] + M[c] o2[ap] genes: LOCUS:PFB0505c# LOCUS:PFF1275c# proteins: GENE ASSOCIATION: (PFB0505c) or (PFF1275c)

307708
value: 0.0
type: LocalParameter

789776
stoichiometry: 1.0
species: 300777
type: SpeciesReference

756914
stoichiometry: 1.0
species: 300346
type: SpeciesReference

306865
value: 0.0
type: LocalParameter

300022
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 1_tetradec_7_enoyl_sn_glycerol_3_phosphate_C17H31O7P1
type: Species

815035
stoichiometry: 1.0
species: 300222
type: SpeciesReference

791783
stoichiometry: 1.0
species: 300903
type: SpeciesReference

307800
value: 0.0
type: LocalParameter

784127
stoichiometry: 1.0
species: 301102
type: SpeciesReference

308784
value: 0.0
type: LocalParameter

308211
units: 756574
value: 999999.0
type: LocalParameter

303863
fast: false
name: hypoxanthine_phosphoribosyltransferase
product: 801802
type: Reaction
kinetic law: 801826
notes: Abbreviation: R_XPRT EC Number: 2.4.2.8 SUBSYSTEM: Nucleotides_PurineMetabolism Equation: M_xan[c] + M_prpp[c] --> M_xmp[c] + M_ppi[c] genes: LOCUS:PF10_0121# proteins: GENE ASSOCIATION: (PF10_0121)
product: 801814
reactant: 801790
reversible: false
reactant: 801778

308514
units: 756574
value: 999999.0
type: LocalParameter

795613
stoichiometry: 1.0
species: 301551
type: SpeciesReference

301314
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: phosphatidylethanolamine_ditetradec_7_enoyl_n_C141_C33H62N1O8P1
type: Species

305151
units: 756574
value: 0.0
type: LocalParameter

302488
kinetic law: 771969
product: 771957
reactant: 771945
notes: Abbreviation: R_EX_etha_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M tha[e] <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_etha_e_
type: Reaction

310420
units: 756574
value: -999999.0
type: LocalParameter

308092
value: 0.0
type: LocalParameter

307707
units: 756574
value: 999999.0
type: LocalParameter

815429
stoichiometry: 1.0
species: 300528
type: SpeciesReference

302834
name: beta-ketoacyl-acyl-carrier-protein_synthase_I
reactant: 778027
product: 778087
kinetic law: 778099
product: 778075
reactant: 778051
fast: false
notes: Abbreviation: R_3OAS140_ap EC Number: 2.3.1.41 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_ddcaACP[ap] + M_h[ap] + M[m] alACP[ap] --> M_3omrsACP[ap] + M_ACP[ap] + M[c] o2[ap] genes: LOCUS:PFB0505c# LOCUS:PFF1275c# proteins: GENE ASSOCIATION: (PFB0505c) or (PFF1275c)
product: 778063
type: Reaction
reversible: false
reactant: 778039

301316
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: phosphatidylethanolamine_ditetradec_7_enoyl_n_C141_C33H62N1O8P1
type: Species

306862
units: 756622
value: 0.0
type: LocalParameter

816643
stoichiometry: 1.0
species: 300212
type: SpeciesReference

300138
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 3-Hydroxy-2-methylpropanoate_C4H7O3
type: Species

301755
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: Xanthosine_5_phosphate_C10H11N4O9P
type: Species

781214
stoichiometry: 1.0
species: 301070
type: SpeciesReference

304969
units: 756574
value: 0.0
type: LocalParameter

306767
units: 756622
value: 0.0
type: LocalParameter

308367
value: 0.0
type: LocalParameter

308781
units: 756574
value: 0.0
type: LocalParameter

308511
units: 756622
value: 0.0
type: LocalParameter

302053
kinetic law: 759391
reversible: false
product: 759379
product: 759367
reactant: 759318
reactant: 759342
product: 759355
fast: false
reactant: 759330
notes: Abbreviation: R_OIVD2_mt EC Number: 1.2.4.4+2.3.1.168+1.8.1.4 (~1.2.1.25) SUBSYSTEM: AminoAcids_LeuIleValMetabolism Equation: M_3mob[m] + M[c] oa[m] + M_nad[m] --> M[c] o2[m] + M_ibcoa[m] + M_nadh[m] genes: LOCUS:PFE0225w# LOCUS:PFC0170c# LOCUS:PF08_0066# LOCUS:PFL1550w# proteins: GENE ASSOCIATION: (PFE0225w) and (PFC0170c) and ((PF08_0066) or (PFL1550w))
type: Reaction
name: R_OIVD2_mt

769116
stoichiometry: 1.0
species: 300414
type: SpeciesReference

787857
stoichiometry: 1.0
species: 300775
type: SpeciesReference

303650
fast: false
name: R_LPLIPAL2ATG181
notes: Abbreviation: R_LPLIPAL2ATG181 EC Number: SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_2agpg181[c] + M_pg181[c] --> M[ap] g181[c] + M_g3pg[c] genes: LOCUS:PF07_0005# LOCUS:PF07_0040# LOCUS:PF10_0379# LOCUS:PF14_0017# LOCUS:PF14_0737# LOCUS:PF14_0738# proteins: GENE ASSOCIATION: (PF07_0005) or (PF07_0040) or (PF10_0379) or (PF14_0017) or (PF14_0737) or (PF14_0738)
kinetic law: 797454
type: Reaction
product: 797430
reactant: 797406
product: 797442
reversible: false
reactant: 797418

809776
stoichiometry: 1.0
species: 300843
type: SpeciesReference

303392
name: phospholipase_C
fast: false
notes: Abbreviation: R_PIPLC EC Number: 3.1.4.3 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pail[c] --> M_dag[c] + M_h[c] + M[m] i1p_D[c] genes: LOCUS:PF10_0132# proteins: GENE ASSOCIATION: (PF10_0132)
reversible: false
product: 791539
product: 791527
reactant: 791503
reactant: 791491
product: 791515
type: Reaction
kinetic law: 791552

306863
units: 756574
value: -999999.0
type: LocalParameter

762553
stoichiometry: 1.0
species: 300911
type: SpeciesReference

308093
units: 756622
value: 0.0
type: LocalParameter

784548
stoichiometry: 1.0
species: 300414
type: SpeciesReference

300024
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: 1_tetradecanoyl_sn_glycerol_3_phosphate_C17H33O7P1
type: Species

791904
stoichiometry: 1.0
species: 300939
type: SpeciesReference

799028
stoichiometry: 1.0
species: 300903
type: SpeciesReference

304968
units: 756622
value: 0.0
type: LocalParameter

776770
stoichiometry: 0.1
species: 301056
type: SpeciesReference

774039
stoichiometry: 1.0
species: 301936
type: SpeciesReference

762976
stoichiometry: 1.0
species: 300911
type: SpeciesReference

308368
units: 756622
value: 0.0
type: LocalParameter

301757
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: cholesterol_ester
type: Species

306768
units: 756574
value: -999999.0
type: LocalParameter

794515
stoichiometry: 1.0
species: 301350
type: SpeciesReference

812974
stoichiometry: 1.0
species: 300586
type: SpeciesReference

778558
stoichiometry: 1.0
species: 301062
type: SpeciesReference

304643
kinetic law: 815442
product: 815429
reactant: 815415
notes: Abbreviation: R_CPPPG3tmt EC Number: SUBSYSTEM: Transport_MT Equation: M[c] pppg3[m] <==> M[c] pppg3[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_CPPPG3tmt
type: Reaction

308512
units: 756574
value: 0.0
type: LocalParameter

307705
units: 756574
value: 0.0
type: LocalParameter

309759
units: 756622
value: 0.0
type: LocalParameter

303590
kinetic law: 796094
name: R_UDCPDPS
reactant: 796058
type: Reaction
notes: Abbreviation: R_UDCPDPS EC Number: SUBSYSTEM: Lipids_TerpenoidMetabolism Equation: M_frdp[c] + (8.0) M_ipdp[c] --> (8.0) M_ppi[c] + M_udcpdp[c] genes: proteins: GENE ASSOCIATION:
fast: false
reactant: 796046
reversible: false
product: 796082
product: 796070

307806
value: 0.0
type: LocalParameter

301531
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Selenophosphate_H2O3PSe
type: Species

306860
value: 0.0
type: LocalParameter

792603
stoichiometry: 1.0
species: 299984
type: SpeciesReference

800148
stoichiometry: 1.0
species: 300903
type: SpeciesReference

817911
stoichiometry: 0.0519
species: 300484
type: SpeciesReference

766969
stoichiometry: 1.0
species: 301130
type: SpeciesReference

793061
stoichiometry: 1.0
species: 301220
type: SpeciesReference

796419
stoichiometry: 1.0
species: 301142
type: SpeciesReference

816967
stoichiometry: 36.0
species: 300352
type: SpeciesReference

786477
stoichiometry: 1.0
species: 301416
type: SpeciesReference

310422
units: 756574
value: 999999.0
type: LocalParameter

777457
stoichiometry: 1.0
species: 301140
type: SpeciesReference

781515
stoichiometry: 2.0
species: 301140
type: SpeciesReference

309469
units: 756574
value: -999999.0
type: LocalParameter

803708
stoichiometry: 1.0
species: 300903
type: SpeciesReference

303866
kinetic law: 801923
product: 801886
fast: false
product: 801898
reactant: 801838
reversible: false
name: Adenylosuccinate_synthase
type: Reaction
reactant: 801862
notes: Abbreviation: R_ADSS EC Number: 6.3.4.4 SUBSYSTEM: Nucleotides_PurineMetabolism ; AminoAcids_AsnAspMetabolism Equation: M_asp_L[c] + M_gtp[c] + M_imp[c] --> M_dcamp[c] + M_gdp[c] + (2.0) M_h[c] + M_pi[c] genes: LOCUS:PF13_0287# proteins: GENE ASSOCIATION: (PF13_0287)
product: 801910
reactant: 801850
product: 801874

306761
units: 756622
value: 0.0
type: LocalParameter

307704
units: 756622
value: 0.0
type: LocalParameter

308214
units: 756622
value: 0.0
type: LocalParameter

302911
reactant: 779948
reactant: 779960
kinetic law: 780008
fast: false
product: 779984
reversible: false
type: Reaction
product: 779996
name: enoyl-[acyl-carrier-protein]_reductase_(NADH)
reactant: 779972
notes: Abbreviation: R_EAR60x_ap EC Number: 1.3.1.9 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M_h[ap] + M_nadh[ap] + M_thex2eACP[ap] --> M_hexACP[ap] + M_nad[ap] genes: LOCUS:PFF0730c# proteins: GENE ASSOCIATION: (PFF0730c)

789048
stoichiometry: 1.0
species: 300775
type: SpeciesReference

309754
units: 756622
value: 0.0
type: LocalParameter

306539
units: 756622
value: 0.0
type: LocalParameter

304757
kinetic law: 816907
product: 816895
reactant: 816883
notes: Abbreviation: R_EX_hb EC Number: SUBSYSTEM: Exchange Equation: [e] : --> M_hb genes: proteins: GENE ASSOCIATION:
fast: false
reversible: false
name: R_EX_hb
type: Reaction

308369
units: 756574
value: 0.0
type: LocalParameter

803853
stoichiometry: 1.0
species: 301252
type: SpeciesReference

307918
units: 756574
value: 0.0
type: LocalParameter

762020
stoichiometry: 1.0
species: 301741
type: SpeciesReference

815577
stoichiometry: 1.0
species: 300757
type: SpeciesReference

760633
stoichiometry: 1.0
species: 300915
type: SpeciesReference

768883
stoichiometry: 1.0
species: 300058
type: SpeciesReference

801959
stoichiometry: 1.0
species: 300903
type: SpeciesReference

309468
units: 756622
value: 0.0
type: LocalParameter

310317
units: 756574
value: 999999.0
type: LocalParameter

306762
units: 756574
value: -999999.0
type: LocalParameter

301310
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: phosphatidylethanolamine_ditetradecanoyl_n_C140_C33H66N1O8P1
type: Species

308215
units: 756574
value: 0.0
type: LocalParameter

307703
value: 0.0
type: LocalParameter

308510
value: 0.0
type: LocalParameter

789909
stoichiometry: 1.0
species: 300903
type: SpeciesReference

301759
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: cholesterol_ester
type: Species

307804
units: 756574
value: 999999.0
type: LocalParameter

304965
value: 0.0
type: LocalParameter

303653
kinetic law: 797514
reversible: false
notes: Abbreviation: R_PAPA120 EC Number: 3.1.3.4 SUBSYSTEM: Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa120[c] --> M_12dgr120[c] + M_pi[c] genes: LOCUS:PFC0995c# proteins: GENE ASSOCIATION: (PFC0995c)
reactant: 797478
fast: false
name: phosphatidate_phosphatase
product: 797490
product: 797502
type: Reaction
reactant: 797466

308780
units: 756622
value: 0.0
type: LocalParameter

758104
stoichiometry: 1.0
species: 300829
type: SpeciesReference

301533
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: L_Serine_C3H7NO3
type: Species

786368
stoichiometry: 1.0
species: 300911
type: SpeciesReference

307917
units: 756622
value: 0.0
type: LocalParameter

303869
reversible: false
type: Reaction
product: 801995
notes: Abbreviation: R_GMPS2 EC Number: 6.3.5.2 SUBSYSTEM: AminoAcids_GluMetabolism Equation: M_atp[c] + M_gln_L[c] + M_h2o[c] + M_xmp[c] --> M_amp[c] + M_glu_L[c] + M_gmp[c] + (2.0) M_h[c] + M_ppi[c] genes: LOCUS:PF10_0123# proteins: GENE ASSOCIATION: (PF10_0123)
reactant: 801971
fast: false
product: 802031
product: 802019
name: GMP_synthase_(glutamine-hydrolysing)
reactant: 801959
product: 801983
reactant: 801947
kinetic law: 802043
reactant: 801935
product: 802007

761240
stoichiometry: 1.0
species: 301713
type: SpeciesReference

305150
units: 756622
value: 0.0
type: LocalParameter

783026
stoichiometry: 1.0
species: 300901
type: SpeciesReference

303440
reversible: false
product: 792675
type: Reaction
name: phospholipase_A2
reactant: 792651
fast: false
product: 792687
product: 792699
reactant: 792663
kinetic law: 792711
notes: Abbreviation: R_PLIPA2G140pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pg140[c] --> M_1agpg140[c] + M_h[c] + M_ttdca[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)

302611
kinetic law: 773539
product: 773527
reactant: 773515
notes: Abbreviation: R_EX_nh4_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M_nh4 <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_nh4_e_
type: Reaction

309756
units: 756574
value: 999999.0
type: LocalParameter

306650
units: 756574
value: 999999.0
type: LocalParameter

310425
units: 756622
value: 0.0
type: LocalParameter

797661
stoichiometry: 1.0
species: 301268
type: SpeciesReference

307803
units: 756574
value: 0.0
type: LocalParameter

787736
stoichiometry: 1.0
species: 300474
type: SpeciesReference

304646
kinetic law: 815481
product: 815469
reactant: 815456
notes: Abbreviation: R_CYSLtmt EC Number: SUBSYSTEM: Transport_MT Equation: M[c] ys_L[m] <==> M[c] ys_L[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_CYSLtmt
type: Reaction

805306
stoichiometry: 1.0
species: 301138
type: SpeciesReference

767077
stoichiometry: 1.0
species: 300370
type: SpeciesReference

307916
value: 0.0
type: LocalParameter

310423
value: 0.0
type: LocalParameter

783825
stoichiometry: 1.0
species: 301092
type: SpeciesReference

797048
stoichiometry: 1.0
species: 301346
type: SpeciesReference

300020
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: 1_tetradec_7_enoyl_sn_glycerol_3_phosphate_C17H31O7P1
type: Species

775888
stoichiometry: 1.0
species: 301230
type: SpeciesReference

302837
name: beta-ketoacyl-acyl-carrier-protein_synthase_I
reactant: 778135
kinetic law: 778183
reactant: 778111
product: 778159
reversible: false
product: 778147
reactant: 778123
fast: false
product: 778171
notes: Abbreviation: R_3OAS141_ap EC Number: 2.3.1.41 SUBSYSTEM: Lipids_FattyAcidSynthesis Equation: M[c] ddec5eACP[ap] + M_h[ap] + M[m] alACP[ap] --> M_3ocmrs7eACP[ap] + M_ACP[ap] + M[c] o2[ap] genes: LOCUS:PFB0505c# LOCUS:PFF1275c# proteins: GENE ASSOCIATION: (PFB0505c) or (PFF1275c)
type: Reaction

310319
value: 0.0
type: LocalParameter

301312
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299931
name: phosphatidylethanolamine_ditetradecanoyl_n_C140_C33H66N1O8P1
type: Species

303395
reactant: 791576
reversible: false
reactant: 791564
kinetic law: 791625
product: 791588
type: Reaction
notes: Abbreviation: R_PLIPA2A120pp EC Number: 3.1.1.4 SUBSYSTEM: Lipids_PhosphatidylcholineMetabolism ; Lipids_PhosphatidyletanolaminePhosphatidylserineMetabolism ; Lipids_UtilizationPhospholipids Equation: M_h2o[c] + M_pa120[c] --> M_1ddecg3p[c] + M_ddca[c] + M_h[c] genes: LOCUS:PFB0410c# proteins: GENE ASSOCIATION: (PFB0410c)
product: 791600
fast: false
product: 791613
name: phospholipase_A2

304322
kinetic law: 810921
product: 810909
reactant: 810897
notes: Abbreviation: R_NADPtap EC Number: SUBSYSTEM: Transport_AP Equation: M_nadp[ap] <==> M_nadp[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_NADPtap
type: Reaction

308213
value: 0.0
type: LocalParameter

309466
value: 0.0
type: LocalParameter

307701
units: 756574
value: 999999.0
type: LocalParameter

306651
value: 0.0
type: LocalParameter

763529
stoichiometry: 1.0
species: 301142
type: SpeciesReference

801392
stoichiometry: 1.0
species: 301509
type: SpeciesReference

306764
units: 756574
value: 999999.0
type: LocalParameter

783172
stoichiometry: 2.0
species: 300302
type: SpeciesReference

309755
units: 756574
value: -999999.0
type: LocalParameter

307802
units: 756622
value: 0.0
type: LocalParameter

782770
stoichiometry: 1.0
species: 300128
type: SpeciesReference

793138
stoichiometry: 1.0
species: 301346
type: SpeciesReference

790271
stoichiometry: 1.0
species: 300903
type: SpeciesReference

796299
stoichiometry: 1.0
species: 301398
type: SpeciesReference

814491
stoichiometry: 1.0
species: 300911
type: SpeciesReference

302602
kinetic law: 773431
product: 773418
reactant: 773406
notes: Abbreviation: R_EX_man_e_ EC Number: SUBSYSTEM: Exchange Equation: [e] : M[m] an <==> genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_EX_man_e_
type: Reaction

760840
stoichiometry: 2.0
species: 300907
type: SpeciesReference

808809
stoichiometry: 1.0
species: 301697
type: SpeciesReference

783583
stoichiometry: 1.0
species: 300302
type: SpeciesReference

808954
stoichiometry: 1.0
species: 300352
type: SpeciesReference

308229
value: 0.0
type: LocalParameter

307278
units: 756574
value: 0.0
type: LocalParameter

800715
stoichiometry: 1.0
species: 301390
type: SpeciesReference

300254
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 5_methylthioinosine_C11H14N4O4S
type: Species

309000
units: 756622
value: 0.0
type: LocalParameter

791613
stoichiometry: 1.0
species: 300911
type: SpeciesReference

300040
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: 2_Acyl_sn_glycero_3_phosphoethanolamine_n_C180_C23H48NO7P1
type: Species

306847
units: 756622
value: 0.0
type: LocalParameter

780227
stoichiometry: 1.0
species: 300598
type: SpeciesReference

810897
stoichiometry: 1.0
species: 301140
type: SpeciesReference

779464
stoichiometry: 1.0
species: 301629
type: SpeciesReference

306440
units: 756574
value: -999999.0
type: LocalParameter

799907
stoichiometry: 1.0
species: 300903
type: SpeciesReference

302283
product: 767221
reactant: 767149
reactant: 767161
fast: false
kinetic law: 767246
type: Reaction
reactant: 767185
reactant: 767173
name: nicotinate_phosphoribosyltransferase
reversible: false
notes: Abbreviation: R_NAMNPP EC Number: 2.4.2.11 SUBSYSTEM: Cofactors_NicotinateNicotinamideMetabolism Equation: M_atp[c] + M_h2o[c] + M_nac[c] + M_prpp[c] --> M_adp[c] + M_nicrnt[c] + M_pi[c] + M_ppi[c] genes: LOCUS:PFF1410c# proteins: GENE ASSOCIATION: (PFF1410c)
product: 767209
product: 767233
product: 767197

304325
kinetic law: 810957
product: 810945
reactant: 810933
notes: Abbreviation: R_NADtap EC Number: SUBSYSTEM: Transport_AP Equation: M_nad[ap] <==> M_nad[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_NADtap
type: Reaction

309740
units: 756574
value: 999999.0
type: LocalParameter

764340
stoichiometry: 1.0
species: 301519
type: SpeciesReference

308228
units: 756574
value: 999999.0
type: LocalParameter

307279
units: 756574
value: 999999.0
type: LocalParameter

809619
stoichiometry: 1.0
species: 300276
type: SpeciesReference

768715
stoichiometry: 1.0
species: 300829
type: SpeciesReference

309001
units: 756574
value: -999999.0
type: LocalParameter

300368
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299935
name: AMP_C10H12N5O7P
type: Species

788679
stoichiometry: 1.0
species: 300851
type: SpeciesReference

816437
stoichiometry: 1.0
species: 301563
type: SpeciesReference

802117
stoichiometry: 1.0
species: 300414
type: SpeciesReference

768448
stoichiometry: 1.0
species: 300526
type: SpeciesReference

818031
stoichiometry: 0.2045
species: 301619
type: SpeciesReference

310282
units: 756622
value: 0.0
type: LocalParameter

799160
stoichiometry: 1.0
species: 301416
type: SpeciesReference

804251
stoichiometry: 2.0
species: 300911
type: SpeciesReference

304328
kinetic law: 810994
product: 810981
reactant: 810969
notes: Abbreviation: R_NH4tap EC Number: SUBSYSTEM: Transport_AP Equation: M_nh4[ap] <==> M_nh4[c] genes: proteins: GENE ASSOCIATION:
fast: false
reversible: true
name: R_NH4tap
type: Reaction

305147
value: 0.0
type: LocalParameter

761804
stoichiometry: 1.0
species: 300911
type: SpeciesReference

806926
stoichiometry: 1.0
species: 300911
type: SpeciesReference

301549
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 299929
name: Sphinganine_C18H40NO2
type: Species

797228
stoichiometry: 1.0
species: 301352
type: SpeciesReference

781936
stoichiometry: 1.0
species: 299998
type: SpeciesReference