kisrw
is: SBO:0000261
constant: true
value: 1.5
name: kisrw
type: Parameter

kmik dash
is: SBO:0000009
constant: true
value: 0.01
name: kmik'
type: Parameter

kdcycslp
is: SBO:0000356
constant: true
value: 1.0
name: kdcycslp
type: Parameter

CDMT00168
stoichiometry: 1.0
species: s83
type: SpeciesReference

CDMT00130
stoichiometry: 1.0
species: s75
type: SpeciesReference

s64
boundary condition: false
has only substance units: false
initial concentration: NaN
is version of: P32587
name: Pyp3
type: Species
constant: false
initial amount: 0.0
is: SBO:0000252
in compartment: default

Jipre
is: SBO:0000261
constant: true
value: 0.01
name: Jipre
type: Parameter

s74
is: SBO:0000291
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: 0.0
in compartment: default
name: sa347_degraded
type: Species

CDMT00207
stoichiometry: 1.0
species: s166
type: SpeciesReference

CDMT00140
stoichiometry: 1.0
species: s80
type: SpeciesReference

time
unit: CDMT00227
name: time
type: SBMLUnitsDef

kdrum
is: SBO:0000356
constant: true
value: 0.4
name: kdrum
type: Parameter

s55
is version of: P36630
type: Species
is: SBO:0000252
in compartment: default
initial concentration: NaN
has only substance units: false
constant: false
name: cig2+
boundary condition: true
initial amount: 0.0

Jiwee
is: SBO:0000261
constant: true
value: 0.03
name: Jiwee
type: Parameter

Vi25 dash2
is: SBO:0000261
constant: true
value: 1.0
name: Vi25''
type: Parameter

s65
is version of: O13286
type: Species
constant: false
name: iSrw1
initial amount: 0.0
initial concentration: NaN
is: SBO:0000252
in compartment: default
has only substance units: false
boundary condition: true

s75
name: Cig1
in compartment: default
is: SBO:0000252
has only substance units: false
type: Species
is version of: P24865
constant: false
initial concentration: NaN
initial amount: 0.0
boundary condition: false

Vawee dash2
is: SBO:0000363
constant: true
value: 1.0
name: Vawee''
type: Parameter

k dash
is: SBO:0000009
constant: true
value: 10.0
name: k'
type: Parameter

s56
in compartment: default
has only substance units: false
constant: false
is version of: P10815
initial concentration: NaN
initial amount: 0.0439902
boundary condition: false
type: Species
name: Cdc13
is: SBO:0000252

CDMT00156
stoichiometry: 1.0
species: s137
type: SpeciesReference

s61
is: SBO:0000291
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: 0.0
in compartment: default
name: sa161_degraded
type: Species

kdflp
is: SBO:0000356
constant: true
value: 0.1
name: kdflp
type: Parameter

s76
initial concentration: NaN
is: SBO:0000252
in compartment: default
has only substance units: false
boundary condition: true
is version of: P24865
type: Species
constant: false
initial amount: 0.0
name: cig1+

CDMT00155
stoichiometry: 1.0
species: s161
type: SpeciesReference

s57
boundary condition: true
is: SBO:0000252
is version of: P10815
initial concentration: NaN
in compartment: default
name: cdc13+
constant: false
has only substance units: false
initial amount: 0.0
type: Species

CDMT00169
stoichiometry: 1.0
species: s82
type: SpeciesReference

kdrumci1
is: SBO:0000356
constant: true
value: 1.0
name: kdrumci1
type: Parameter

s63
is version of: P36630
type: Species
boundary condition: false
initial concentration: NaN
constant: false
initial amount: 0.0
in compartment: default
name: Cig2p
has only substance units: false
is: SBO:0000252
is version of: C00562

Srw1T
is: SBO:0000196
constant: true
value: 1.0
name: Srw1T
type: Parameter

Slp1T
is: SBO:0000196
constant: true
value: 1.0
name: Slp1T
type: Parameter

s77
is: SBO:0000291
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: 0.0
in compartment: default
name: sa353_degraded
type: Species

s130
is: SBO:0000252
boundary condition: false
constant: false
is version of: P41411
type: Species
has only substance units: false
initial concentration: NaN
initial amount: 0.0
in compartment: default
name: Vdc18

Jisrw
is: SBO:0000261
constant: true
value: 0.01
name: Jisrw
type: Parameter

CDMT00206
stoichiometry: 1.0
species: s52
type: SpeciesReference

Viwee dash2
is: SBO:0000261
constant: true
value: 1.0
name: Viwee''
type: Parameter

CDMT00164
stoichiometry: 1.0
species: s82
type: SpeciesReference

kdcycsrw dash
is: SBO:0000356
constant: true
value: 1.0E-4
name: kdcycsrw'
type: Parameter

kpyp2
is: SBO:0000009
constant: true
value: 0.01
name: kpyp2
type: Parameter

length
unit: CDMT00226
name: length
type: SBMLUnitsDef

Vdc18
constant: false
value: 0.0
name: Vdc18
type: Parameter

CDMT00121
stoichiometry: 1.0
species: s72
type: SpeciesReference

s88
is: SBO:0000291
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: 0.0
in compartment: default
name: sa386_degraded
type: Species

s78
is: SBO:0000252
initial concentration: NaN
initial amount: 0.0
type: Species
is version of: Q10299
name: Clp1+
in compartment: default
constant: false
has only substance units: false
boundary condition: true

kini dash2
is: SBO:0000009
constant: true
value: 10.0
name: kini''
type: Parameter

CDMT00144
stoichiometry: 1.0
species: s79
type: SpeciesReference

kisrw dash4
is: SBO:0000261
constant: true
value: 4.0
name: kisrw''''
type: Parameter

W3 CDTF: Thu Jan 12 13:27:10 GMT 2012

s149
type: Species
has part: P36630
initial amount: 0.0
has part: P40380
in compartment: default
initial concentration: NaN
constant: false
boundary condition: false
name: Cig2-Rum1
is: SBO:0000297
has only substance units: false

s51
is: SBO:0000014
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: 0.0
in compartment: default
name: iIE
type: Species

s89
type: Species
constant: false
initial amount: 0.0
in compartment: default
boundary condition: true
name: preRC
initial concentration: NaN
is: SBO:0000297
is version of: GO:0005656
has only substance units: false

CDMT00122
stoichiometry: 1.0
species: s74
type: SpeciesReference

Jiie
is: SBO:0000261
constant: true
value: 0.01
name: Jiie
type: Parameter

s50
is: SBO:0000014
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: 0.00127807
in compartment: default
name: IE
type: Species

s79
in compartment: default
initial concentration: NaN
has only substance units: false
boundary condition: true
is: SBO:0000252
constant: true
initial amount: 0.0
type: Species
is version of: P07527
name: iWee1

kini dash3
is: SBO:0000009
constant: true
value: 0.0
name: kini'''
type: Parameter

CDMT00143
stoichiometry: 1.0
species: s80
type: SpeciesReference

W3 CDTF: Wed Jul 11 19:10:05 BST 2012

Vimik dash2
is: SBO:0000261
constant: true
value: 10.0
name: Vimik''
type: Parameter

Vi25 dash
is: SBO:0000261
constant: true
value: 0.24
name: Vi25'
type: Parameter

CDMT00152
stoichiometry: 1.0
species: s46
type: SpeciesReference

s52
initial amount: 0.0
initial concentration: NaN
in compartment: default
constant: false
has only substance units: false
is version of: P40380
type: Species
boundary condition: true
is: SBO:0000252
name: rum1+

CDMT00209
stoichiometry: 1.0
species: s89
type: SpeciesReference

Jaie
is: SBO:0000363
constant: true
value: 0.01
name: Jaie
type: Parameter

s66
is: SBO:0000252
initial amount: 0.0
initial concentration: NaN
is version of: P78972
type: Species
name: iSlp1
in compartment: default
constant: false
has only substance units: false
boundary condition: true

Vimik dash3
is: SBO:0000261
constant: true
value: 0.25
name: Vimik'''
type: Parameter

CDMT00151
stoichiometry: 1.0
species: s56
type: SpeciesReference

CDMT00165
stoichiometry: 1.0
species: s83
type: SpeciesReference

kipre
is: SBO:0000261
constant: true
value: 1.0
name: kipre
type: Parameter

Puc1
is: SBO:0000196
constant: true
value: 1.0
name: Puc1
type: Parameter

ksci1
is: SBO:0000009
constant: true
value: 0.0015
name: ksci1
type: Parameter

CDMT00131
stoichiometry: 1.0
species: s77
type: SpeciesReference

CDMT00110
stoichiometry: 1.0
species: s71
type: SpeciesReference

s67
initial amount: 0.0
boundary condition: false
is version of: P36630
type: Species
name: Cig2
in compartment: default
constant: false
has only substance units: false
initial concentration: NaN
is: SBO:0000252

CDMT00148
stoichiometry: 1.0
species: s46
type: SpeciesReference

CDMT00111
stoichiometry: 1.0
species: s70
type: SpeciesReference

CDMT00075
stoichiometry: 1.0
species: s166
type: SpeciesReference

CDMT00065
stoichiometry: 1.0
species: s67
type: SpeciesReference

CDMT00106
stoichiometry: 1.0
species: s63
type: SpeciesReference

s84
is: SBO:0000252
name: Cdc18T
is version of: P41411
initial concentration: NaN
constant: false
has only substance units: false
boundary condition: false
in compartment: default
initial amount: 0.0
type: Species

Wee1T
is: SBO:0000196
constant: true
value: 1.0
name: Wee1T
type: Parameter

s83
name: Cdc25
has only substance units: false
boundary condition: false
in compartment: default
constant: false
is: SBO:0000252
initial amount: 0.0
initial concentration: NaN
is version of: P06652
type: Species

re58
kinetic law: CDMT00201
product: CDMT00200
reactant: CDMT00199
reactant: CDMT00198
is: SBO:0000526
fast: false
reversible: true
type: Reaction

s166
is version of: P40380
is: SBO:0000252
boundary condition: false
initial amount: 0.0
initial concentration: NaN
type: Species
name: Rum1
has only substance units: false
in compartment: default
constant: false

CDMT00139
stoichiometry: 1.0
species: s79
type: SpeciesReference

Jasrw
is: SBO:0000363
constant: true
value: 0.01
name: Jasrw
type: Parameter

CDMT00177
stoichiometry: 1.0
species: s84
type: SpeciesReference

s93
is: SBO:0000291
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: 0.0
in compartment: default
name: sa370_degraded
type: Species

CDMT00147
stoichiometry: 1.0
species: s60
type: SpeciesReference

CDMT00064
stoichiometry: 1.0
species: s63
type: SpeciesReference

lm
is: SBO:0000361
constant: true
value: 100.0
name: lm
type: Parameter

CDMT00107
stoichiometry: 1.0
species: s94
type: SpeciesReference

CDMT00074
stoichiometry: 1.0
species: s149
type: SpeciesReference

kmik dash2
is: SBO:0000009
constant: true
value: 4.0
name: kmik''
type: Parameter

s85
constant: false
has only substance units: false
in compartment: default
initial amount: 0.0
initial concentration: NaN
name: cdc18+
type: Species
boundary condition: true
is: SBO:0000252
is version of: P41411

re57
product: CDMT00194
modifier: CDMT00195
reactant: CDMT00193
fast: false
modifier: CDMT00196
reversible: false
kinetic law: CDMT00197
is: SBO:0000216
type: Reaction

CDMT00188
stoichiometry: 1.0
species: s60
type: SpeciesReference

kisrw dash
is: SBO:0000261
constant: true
value: 40.0
name: kisrw'
type: Parameter

ksc18
is: SBO:0000009
constant: true
value: 0.005
name: ksc18
type: Parameter

s94
is: SBO:0000291
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: 0.0
in compartment: default
name: sa44_degraded
type: Species

CDMT00178
stoichiometry: 1.0
species: s88
type: SpeciesReference

Cdc10T
is: SBO:0000196
constant: true
value: 1.0
name: Cdc10T
type: Parameter

kisrw dash2
is: SBO:0000261
constant: true
value: 1.0
name: kisrw''
type: Parameter

CDMT00136
stoichiometry: 1.0
species: s81
type: SpeciesReference

s137
boundary condition: false
initial amount: 0.0432273
has part: P40380
in compartment: default
initial concentration: NaN
constant: false
has only substance units: false
has part: P10815
is: SBO:0000297
type: Species
name: Cdc13p-Rum1

CDMT00103
stoichiometry: 1.0
species: s61
type: SpeciesReference

s81
in compartment: default
boundary condition: false
name: Clp1
constant: false
is: SBO:0000252
is version of: Q10299
initial concentration: NaN
initial amount: 0.0
type: Species
has only substance units: false

CDMT00189
stoichiometry: 1.0
species: s56
type: SpeciesReference

CDMT00076
stoichiometry: 1.0
species: s94
type: SpeciesReference

kisrw dash3
is: SBO:0000261
constant: true
value: 4.0
name: kisrw'''
type: Parameter

CDMT00114
stoichiometry: 1.0
species: s70
type: SpeciesReference

s157
boundary condition: true
has only substance units: false
in compartment: default
name: UDNA
type: Species
is: SBO:0000251
is version of: CHEBI:16991
constant: true
initial concentration: NaN
initial amount: 0.0

CDMT00135
stoichiometry: 1.0
species: s78
type: SpeciesReference

Viwee dash
is: SBO:0000261
constant: true
value: 0.0
name: Viwee'
type: Parameter

http://identifiers.org/biomodels.db/BIOMD0000000406#n
is: SBO:0000361
constant: true
value: 4.0
name: n
type: Parameter

s82
name: iCdc25
has only substance units: false
in compartment: default
initial concentration: NaN
is version of: P06652
constant: false
is: SBO:0000252
initial amount: 0.0
boundary condition: true
type: Species

ksc18 dash
is: SBO:0000009
constant: true
value: 0.075
name: ksc18'
type: Parameter

default
is version of: GO:0005623
is: SBO:0000290
constant: true
units: volume
size: 1.0
spatial dimensions: 3.0
type: Compartment

CDMT00071
stoichiometry: 1.0
species: s67
type: SpeciesReference

re53
kinetic law: CDMT00183
product: CDMT00182
reactant: CDMT00181
is: SBO:0000179
fast: false
reversible: false
type: Reaction

CDMT00115
stoichiometry: 1.0
species: s71
type: SpeciesReference

kic10 dash
is: SBO:0000261
constant: true
value: 3.0
name: kic10'
type: Parameter

CDMT00061
stoichiometry: 1.0
species: s63
type: SpeciesReference

lp
is: SBO:0000361
constant: true
value: 500.0
name: lp
type: Parameter

CDMT00041
stoichiometry: 1.0
species: s161
type: SpeciesReference

re68
kinetic law: CDMT00222
product: CDMT00221
reactant: CDMT00220
is: SBO:0000204
fast: false
reversible: false
type: Reaction

Vamik
is: SBO:0000363
constant: true
value: 0.25
name: Vamik
type: Parameter

Ja25
is: SBO:0000363
constant: true
value: 0.03
name: Ja25
type: Parameter

CDMT00101
stoichiometry: 1.0
species: s149
type: SpeciesReference

CDMT00051
stoichiometry: 1.0
species: s137
type: SpeciesReference

ORG:
  orgname: Okayama University
n:
  given: Hisao
  family: Moriya

CDMT00070
stoichiometry: 1.0
species: s166
type: SpeciesReference

CDMT00060
stoichiometry: 1.0
species: s67
type: SpeciesReference

s60
is version of: P10815
initial amount: 0.1147007
initial concentration: NaN
is version of: C00562
in compartment: default
type: Species
name: pCdc13
constant: false
is: SBO:0000252
has only substance units: false
boundary condition: false

kscig
is: SBO:0000009
constant: true
value: 0.002
name: kscig
type: Parameter

s90
initial concentration: NaN
is version of: GO:0000808
initial amount: 0.0
boundary condition: false
has only substance units: false
constant: false
is: SBO:0000297
in compartment: default
name: postRC
type: Species

krepl
is: SBO:0000009
constant: true
value: 2.0
name: krepl
type: Parameter

kwee
constant: false
value: 0.0
name: kwee
type: Parameter

CDMT00117
stoichiometry: 1.0
species: s73
type: SpeciesReference

re67
modifier: CDMT00218
kinetic law: CDMT00219
modifier: CDMT00216
reactant: CDMT00214
fast: false
is: SBO:0000204
product: CDMT00215
reversible: false
type: Reaction
modifier: CDMT00217

s80
has only substance units: false
name: Wee1
is version of: P07527
initial concentration: NaN
type: Species
in compartment: default
constant: false
boundary condition: false
is: SBO:0000252
initial amount: 0.0

CDMT00102
stoichiometry: 1.0
species: s67
type: SpeciesReference

s70
name: iCdc10
in compartment: default
type: Species
is version of: P01129
initial amount: 0.0
boundary condition: true
constant: false
has only substance units: true
initial concentration: NaN
is: SBO:0000252

Ji25
is: SBO:0000261
constant: true
value: 0.03
name: Ji25
type: Parameter

CDMT00127
stoichiometry: 1.0
species: s76
type: SpeciesReference

CDMT00199
stoichiometry: 1.0
species: s60
type: SpeciesReference

k25 dash2
is: SBO:0000009
constant: true
value: 1.0
name: k25''
type: Parameter

s91
constant: false
is version of: CHEBI:16991
initial amount: 0.0
name: repldna
has only substance units: false
type: Species
boundary condition: false
in compartment: default
is: SBO:0000251
initial concentration: NaN

re66
fast: false
kinetic law: CDMT00213
type: Reaction
reversible: false
modifier: CDMT00211
modifier: CDMT00001
modifier: CDMT00212
product: CDMT00210
reactant: CDMT00209
is: SBO:0000344

CDMT00118
stoichiometry: 1.0
species: s72
type: SpeciesReference

Jac10
is: SBO:0000363
constant: true
value: 0.01
name: Jac10
type: Parameter

kdrumc13
is: SBO:0000356
constant: true
value: 50.0
name: kdrumc13
type: Parameter

s71
is: SBO:0000252
name: Cdc10
has only substance units: false
type: Species
initial amount: 0.0
in compartment: default
is version of: P01129
initial concentration: NaN
boundary condition: false
constant: false

http://identifiers.org/biomodels.db/BIOMD0000000406#k
is: SBO:0000009
constant: true
value: 0.1
name: k
type: Parameter

Vimik dash
is: SBO:0000261
constant: true
value: 10.0
name: Vimik'
type: Parameter

re56
is: SBO:0000330
type: Reaction
modifier: CDMT00191
kinetic law: CDMT00192
fast: false
product: CDMT00189
modifier: CDMT00190
reversible: false
reactant: CDMT00188

CDMT00128
stoichiometry: 1.0
species: s75
type: SpeciesReference

re54
kinetic law: CDMT00187
product: CDMT00186
reactant: CDMT00185
reactant: CDMT00184
is: SBO:0000526
fast: false
reversible: true
type: Reaction

Vdrum
constant: false
value: 0.0
name: Vdrum
type: Parameter

CDMT00072
stoichiometry: 1.0
species: s149
type: SpeciesReference

Vi25
is: SBO:0000261
constant: true
value: 0.3
name: Vi25
type: Parameter

s73
is version of: P30290
has only substance units: false
boundary condition: true
type: Species
is: SBO:0000252
in compartment: default
constant: false
initial concentration: NaN
initial amount: 0.0
name: mik1+

s153
is: SBO:0000297
constant: false
initial amount: 0.0
type: Species
has only substance units: false
in compartment: default
name: Cig2p-Rum1
initial concentration: NaN
has part: P40380
boundary condition: false
has part: P36630

s92
initial amount: 0.0
is: SBO:0000251
initial concentration: NaN
has only substance units: false
type: Species
in compartment: default
name: irepldna
boundary condition: true
constant: false
is version of: CHEBI:16991

s72
type: Species
is version of: P30290
initial amount: 0.0
in compartment: default
constant: false
is: SBO:0000252
has only substance units: false
boundary condition: false
name: Mik1
initial concentration: NaN

CDMT00052
stoichiometry: 1.0
species: s161
type: SpeciesReference

kdrumcig dash
is: SBO:0000356
constant: true
value: 10.0
name: kdrumcig_dash
type: Parameter

Jislp
is: SBO:0000261
constant: true
value: 0.01
name: Jislp
type: Parameter

CDMT00224
exponent: 1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

re35
modifier: CDMT00123
reversible: false
fast: false
kinetic law: CDMT00126
product: CDMT00122
modifier: CDMT00124
is: SBO:0000179
modifier: CDMT00125
reactant: CDMT00121
type: Reaction

re45
kinetic law: CDMT00167
modifier: CDMT00166
product: CDMT00165
reactant: CDMT00164
is: SBO:0000344
fast: false
reversible: false
type: Reaction

s9
has only substance units: false
initial concentration: NaN
in compartment: default
type: Species
name: Vdcyc
constant: true
is version of: P25009
boundary condition: true
initial amount: 0.0
is: SBO:0000252

CDMT00198
stoichiometry: 1.0
species: s166
type: SpeciesReference

re60
kinetic law: CDMT00205
modifier: CDMT00204
product: CDMT00203
reactant: CDMT00202
is: SBO:0000179
fast: false
reversible: false
type: Reaction

Cdc18
constant: false
value: 0.0
name: Cdc18
type: Parameter

re36
kinetic law: CDMT00129
product: CDMT00128
reactant: CDMT00127
is: SBO:0000344
fast: false
reversible: false
type: Reaction

CDMT00225
exponent: 2.0
scale: 0
multipler: 1.0
kind: METRE
type: SBMLUnit

kdcig
is: SBO:0000356
constant: true
value: 0.02
name: kdcig
type: Parameter

kini dash
is: SBO:0000009
constant: true
value: 10.0
name: kini_dash
type: Parameter

re46
modifier: CDMT00171
is: SBO:0000344
reversible: false
fast: false
type: Reaction
reactant: CDMT00168
kinetic law: CDMT00172
modifier: CDMT00170
product: CDMT00169

CDMT00097
stoichiometry: 1.0
species: s153
type: SpeciesReference

CDMT00083
stoichiometry: 1.0
species: s153
type: SpeciesReference

kmik
is: SBO:0000009
constant: false
value: 0.0
name: kmik
type: Parameter

k25 dash
is: SBO:0000009
constant: true
value: 0.01
name: k25'
type: Parameter

CDMT00014
stoichiometry: 1.0
species: s50
type: SpeciesReference

CDMT00226
exponent: 1.0
scale: 0
multipler: 1.0
kind: METRE
type: SBMLUnit

re33
kinetic law: CDMT00116
product: CDMT00115
reactant: CDMT00114
is: SBO:0000344
fast: false
reversible: false
type: Reaction

kdc18cig
is: SBO:0000356
constant: true
value: 1.0
name: kdc18cig
type: Parameter

CDMT00018
stoichiometry: 1.0
species: s50
type: SpeciesReference

re47
kinetic law: CDMT00176
modifier: CDMT00175
product: CDMT00174
reactant: CDMT00173
is: SBO:0000344
fast: false
reversible: false
type: Reaction

CDMT00042
stoichiometry: 1.0
species: s56
type: SpeciesReference

CDMT00056
stoichiometry: 1.0
species: s55
type: SpeciesReference

CDMT00182
stoichiometry: 1.0
species: s93
type: SpeciesReference

CDMT00094
stoichiometry: 1.0
species: s94
type: SpeciesReference

CDMT00003
stoichiometry: 1.0
species: s47
type: SpeciesReference

re32
kinetic law: CDMT00113
modifier: CDMT00112
product: CDMT00111
reactant: CDMT00110
is: SBO:0000344
fast: false
reversible: false
type: Reaction

CDMT00227
exponent: 1.0
scale: 0
multipler: 1.0
kind: SECOND
type: SBMLUnit

s161
has part: P40380
name: Cdc13-Rum1
initial amount: 0.0165018
type: Species
has part: P10815
has only substance units: false
is: SBO:0000297
in compartment: default
initial concentration: NaN
constant: false
boundary condition: false

re62
kinetic law: CDMT00208
product: CDMT00207
reactant: CDMT00206
is: SBO:0000344
fast: false
reversible: false
type: Reaction

CDMT00084
stoichiometry: 1.0
species: s166
type: SpeciesReference

CDMT00043
stoichiometry: 1.0
species: s61
type: SpeciesReference

Jawee
is: SBO:0000363
constant: true
value: 0.04
name: Jawee
type: Parameter

re34
kinetic law: CDMT00120
modifier: CDMT00119
product: CDMT00118
reactant: CDMT00117
is: SBO:0000344
fast: false
reversible: false
type: Reaction

BIOMD0000000406
reaction: re41
parameter: kdcig
species: s72
parameter: lm
reaction: re5
reaction: re53
reaction: re34
parameter: Vawee dash
parameter: Jawee
parameter: Jipre
reaction: re18
parameter: Vi25
parameter: Vdc18
parameter: kdcycsrw
parameter: lp
reaction: re66
reaction: re38
species: s65
parameter: lcm
reaction: re30
parameter: kdcycslp
parameter: k255
reaction: re4
parameter: Srw1T
reaction: re23
parameter: kini dash2
parameter: Viwee dash
parameter: kdrumpuc
species: s47
parameter: kori
parameter: kmik
is: MODEL1111040000
parameter: kislp
curated: true
reaction: re8
parameter: kdcycsrw dash
parameter: Vimik dash3
units def: area
parameter: ksci1
reaction: re27
species: s89
species: s93
reaction: re60
parameter: Vdcyc
species: s149
parameter: kasrw dash
reaction: re22
parameter: kisrw dash4
reaction: re47
parameter: Vimik dash
compartment: default
rule: CDMT00230
volume units: volume
species: s153
species: s67
parameter: k25 dash
species: s77
species: s137
parameter: kaslp
species: s48
reaction: re46
parameter: kiie
parameter: kdcig dash
parameter: kscyc
species: s55
parameter: Jac10
parameter: kini dash3
species: s74
reaction: re15
parameter: kdci1
species: s80
species: s84
reaction: re42
parameter: ksrum
parameter: Vi25 dash2
reaction: re35
parameter: Jiwee
parameter: kipre
species: s79
species: s161

CDMT00181
stoichiometry: 1.0
species: s81
type: SpeciesReference

CDMT00057
stoichiometry: 1.0
species: s67
type: SpeciesReference

re48
kinetic law: CDMT00180
modifier: CDMT00179
product: CDMT00178
reactant: CDMT00177
is: SBO:0000179
fast: false
reversible: false
type: Reaction

Vdcyc
constant: false
value: 0.0
name: Vdcyc
type: Parameter

kac10
is: SBO:0000363
constant: true
value: 0.125
name: kac10
type: Parameter

CDMT00002
stoichiometry: 1.0
species: s65
type: SpeciesReference

area
unit: CDMT00225
name: area
type: SBMLUnitsDef

kdcyc
is: SBO:0000356
constant: true
value: 0.018
name: kdcyc
type: Parameter

kaie dash
is: SBO:0000363
constant: true
value: 0.05
name: kaie'
type: Parameter

CDMT00085
stoichiometry: 1.0
species: s94
type: SpeciesReference

kiie
is: SBO:0000261
constant: true
value: 0.04
name: kiie
type: Parameter

CDMT00184
stoichiometry: 1.0
species: s56
type: SpeciesReference

re20
kinetic law: CDMT00063
modifier: CDMT00062
product: CDMT00061
reactant: CDMT00060
is: SBO:0000216
fast: false
reversible: false
name: Cdc13_Phosphorylation
type: Reaction

beta
is: SBO:0000361
constant: true
value: 10.0
name: beta
type: Parameter

lcm
is: SBO:0000361
constant: true
value: 1.0
name: lcm
type: Parameter

ko18r
is: SBO:0000009
constant: true
value: 1.0
name: ko18r
type: Parameter

CDMT00048
stoichiometry: 1.0
species: s46
type: SpeciesReference

CDMT00174
stoichiometry: 1.0
species: s84
type: SpeciesReference

CDMT00220
stoichiometry: 1.0
species: s90
type: SpeciesReference

re30
fast: false
modifier: CDMT00104
reversible: false
product: CDMT00102
is: SBO:0000180
product: CDMT00103
type: Reaction
reactant: CDMT00101
kinetic law: CDMT00105

CDMT00194
stoichiometry: 1.0
species: s60
type: SpeciesReference

re40
kinetic law: CDMT00146
modifier: CDMT00145
product: CDMT00144
reactant: CDMT00143
is: SBO:0000344
fast: false
reversible: false
type: Reaction

kdc18c13
is: SBO:0000356
constant: true
value: 0.45
name: kdc18c13
type: Parameter

re21
fast: false
kinetic law: CDMT00069
is: SBO:0000330
modifier: CDMT00066
type: Reaction
reversible: false
modifier: CDMT00068
name: Cdc13_Dephosphorylation
product: CDMT00065
reactant: CDMT00064
modifier: CDMT00067

CDMT00028
stoichiometry: 1.0
species: s57
type: SpeciesReference

Vimik
is: SBO:0000261
constant: true
value: 0.75
name: Vimik
type: Parameter

kaslp
is: SBO:0000363
constant: true
value: 1.0
name: kaslp
type: Parameter

CDMT00019
stoichiometry: 1.0
species: s51
type: SpeciesReference

CDMT00038
stoichiometry: 1.0
species: s46
type: SpeciesReference

CDMT00221
stoichiometry: 1.0
species: s91
type: SpeciesReference

CDMT00173
stoichiometry: 1.0
species: s85
type: SpeciesReference

re12
kinetic law: CDMT00030
product: CDMT00029
reactant: CDMT00028
is: SBO:0000393
fast: false
reversible: false
name: Cdc13_Synthesis
type: Reaction

re31
kinetic law: CDMT00109
modifier: CDMT00108
product: CDMT00107
reactant: CDMT00106
is: SBO:0000179
fast: false
reversible: false
type: Reaction

CDMT00193
stoichiometry: 1.0
species: s56
type: SpeciesReference

k25
constant: false
value: 0.0
name: k25
type: Parameter

kic10
is: SBO:0000261
constant: true
value: 0.01
name: kic10
type: Parameter

CDMT00079
stoichiometry: 1.0
species: s166
type: SpeciesReference

re41
kinetic law: CDMT00150
modifier: CDMT00149
product: CDMT00148
reactant: CDMT00147
is: SBO:0000179
fast: false
reversible: false
type: Reaction

CDMT00029
stoichiometry: 1.0
species: s56
type: SpeciesReference

re22
kinetic law: CDMT00073
product: CDMT00072
reactant: CDMT00071
reactant: CDMT00070
is: SBO:0000526
fast: false
reversible: true
name: Rum1+Cdc13_association
type: Reaction

ksflp dash
is: SBO:0000009
constant: true
value: 0.015
name: ksflp'
type: Parameter

CDMT00046
stoichiometry: 1.0
species: s137
type: SpeciesReference

CDMT00186
stoichiometry: 1.0
species: s161
type: SpeciesReference

kasrw dash
is: SBO:0000363
constant: true
value: 30.0
name: kasrw'
type: Parameter

ksflp
is: SBO:0000009
constant: true
value: 0.0015
name: ksflp
type: Parameter

CDMT00098
stoichiometry: 1.0
species: s63
type: SpeciesReference

re23
fast: false
product: CDMT00076
reversible: false
modifier: CDMT00077
type: Reaction
reactant: CDMT00074
is: SBO:0000180
product: CDMT00075
kinetic law: CDMT00078

CDMT00088
stoichiometry: 1.0
species: s153
type: SpeciesReference

re42
kinetic law: CDMT00154
modifier: CDMT00153
product: CDMT00152
reactant: CDMT00151
is: SBO:0000179
fast: false
reversible: false
type: Reaction

CDMT00007
stoichiometry: 1.0
species: s65
type: SpeciesReference

lcp
is: SBO:0000361
constant: true
value: 3.0
name: lcp
type: Parameter

chrom
constant: false
value: 0.0
name: chrom
type: Parameter

re44
kinetic law: CDMT00163
modifier: CDMT00162
product: CDMT00161
reactant: CDMT00160
is: SBO:0000216
fast: false
reversible: false
type: Reaction

kwee dash
is: SBO:0000009
constant: true
value: 0.01
name: kwee'
type: Parameter

CDMT00026
stoichiometry: 1.0
species: s66
type: SpeciesReference

CDMT00185
stoichiometry: 1.0
species: s166
type: SpeciesReference

preRC
constant: false
value: 0.0
name: preRC
type: Parameter

CDMT00223
exponent: 1.0
scale: 0
multipler: 1.0
kind: MOLE
type: SBMLUnit

CDMT00047
stoichiometry: 1.0
species: s166
type: SpeciesReference

Vawee dash
is: SBO:0000363
constant: true
value: 0.24
name: Vawee'
type: Parameter

kdrumcig
is: SBO:0000356
constant: true
value: 15.0
name: kdrumcig
type: Parameter

kislp
is: SBO:0000261
constant: true
value: 0.2
name: kislp
type: Parameter

re24
kinetic law: CDMT00082
product: CDMT00081
reactant: CDMT00080
reactant: CDMT00079
is: SBO:0000526
fast: false
reversible: true
name: Rum1+Cdc13_association
type: Reaction

k255
is: SBO:0000009
constant: true
value: 0.1
name: k255
type: Parameter

CDMT00089
stoichiometry: 1.0
species: s149
type: SpeciesReference

re43
reversible: false
kinetic law: CDMT00159
modifier: CDMT00158
is: SBO:0000216
product: CDMT00156
modifier: CDMT00157
reactant: CDMT00155
fast: false
type: Reaction

kaie
is: SBO:0000363
constant: true
value: 0.0975
name: kaie
type: Parameter

CDMT00006
stoichiometry: 1.0
species: s47
type: SpeciesReference

kdc18
is: SBO:0000356
constant: true
value: 0.001
name: kdc18
type: Parameter

re8
kinetic law: CDMT00027
product: CDMT00026
reactant: CDMT00025
is: SBO:0000344
fast: false
reversible: false
type: Reaction

kwee dash2
is: SBO:0000009
constant: true
value: 0.5
name: kwee''
type: Parameter

re25
kinetic law: CDMT00087
reversible: false
type: Reaction
product: CDMT00084
is: SBO:0000180
modifier: CDMT00086
product: CDMT00085
fast: false
reactant: CDMT00083

kdcycslp dash
is: SBO:0000356
constant: true
value: 3.0E-4
name: kdcycslp'
type: Parameter

Vamik dash
is: SBO:0000363
constant: true
value: 0.75
name: Vamik'
type: Parameter

Rad3
is: SBO:0000361
constant: true
value: 1.0
name: Rad3
type: Parameter

re15
is: SBO:0000180
modifier: CDMT00039
type: Reaction
product: CDMT00037
reversible: false
fast: false
product: CDMT00038
kinetic law: CDMT00040
reactant: CDMT00036

kdrumc13 dash
is: SBO:0000356
constant: true
value: 5.0
name: kdrumc13'
type: Parameter

CDMT00025
stoichiometry: 1.0
species: s48
type: SpeciesReference

re7
kinetic law: CDMT00024
modifier: CDMT00023
product: CDMT00022
reactant: CDMT00021
is: SBO:0000344
fast: false
reversible: false
type: Reaction

re16
name: Trim_Dissociation_Rum1degradation
type: Reaction
is: SBO:0000180
product: CDMT00042
reactant: CDMT00041
product: CDMT00043
reversible: false
fast: false
modifier: CDMT00044
kinetic law: CDMT00045

CDMT00210
stoichiometry: 1.0
species: s90
type: SpeciesReference

kpyp
is: SBO:0000009
constant: true
value: 0.6
name: kpyp
type: Parameter

CDMT00160
stoichiometry: 1.0
species: s149
type: SpeciesReference

oriT
is: SBO:0000361
constant: true
value: 1.0
name: oriT
type: Parameter

BB
constant: false
value: 0.0
name: BB
type: Parameter

kdc18cig dash
is: SBO:0000356
constant: true
value: 0.0
name: kdc18cig'
type: Parameter

re6
kinetic law: CDMT00020
product: CDMT00019
reactant: CDMT00018
is: SBO:0000344
fast: false
reversible: false
type: Reaction

re27
name: Cdc13_Dephosphorylation
reversible: false
fast: false
type: Reaction
kinetic law: CDMT00092
product: CDMT00089
reactant: CDMT00088
modifier: CDMT00091
modifier: CDMT00090
is: SBO:0000330

kdrumpuc
is: SBO:0000356
constant: true
value: 0.1
name: kdrumpuc
type: Parameter

CDMT00037
stoichiometry: 1.0
species: s166
type: SpeciesReference

CDMT00161
stoichiometry: 1.0
species: s153
type: SpeciesReference

UDNA
constant: false
value: 0.0
name: UDNA
type: Parameter

re5
type: Reaction
modifier: CDMT00016
product: CDMT00014
is: SBO:0000344
reactant: CDMT00013
modifier: CDMT00015
kinetic law: CDMT00017
fast: false
reversible: false

re28
kinetic law: CDMT00096
modifier: CDMT00095
product: CDMT00094
reactant: CDMT00093
is: SBO:0000179
fast: false
reversible: false
type: Reaction

Jaslp
is: SBO:0000363
constant: true
value: 0.01
name: Jaslp
type: Parameter

re14
is: SBO:0000180
type: Reaction
name: Trim_Dissociation_Rum1degradation
reactant: CDMT00031
fast: false
product: CDMT00032
product: CDMT00033
modifier: CDMT00034
kinetic law: CDMT00035
reversible: false

CDMT00036
stoichiometry: 1.0
species: s161
type: SpeciesReference

ko18
is: SBO:0000009
constant: true
value: 100.0
name: ko18
type: Parameter

Va25 dash2
is: SBO:0000363
constant: true
value: 1.0
name: Va25''
type: Parameter

CDMT00022
stoichiometry: 1.0
species: s48
type: SpeciesReference

re29
kinetic law: CDMT00100
modifier: CDMT00099
product: CDMT00098
reactant: CDMT00097
is: SBO:0000180
fast: false
reversible: false
type: Reaction

re19
kinetic law: CDMT00059
modifier: CDMT00058
product: CDMT00057
reactant: CDMT00056
is: SBO:0000393
fast: false
reversible: false
name: Cdc13_Synthesis
type: Reaction

re4
modifier: CDMT00009
modifier: CDMT00010
kinetic law: CDMT00012
type: Reaction
product: CDMT00007
is: SBO:0000344
reactant: CDMT00006
modifier: CDMT00011
fast: false
modifier: CDMT00008
reversible: false

substance
unit: CDMT00223
name: substance
type: SBMLUnitsDef

CDMT00021
stoichiometry: 1.0
species: s66
type: SpeciesReference

CDMT00031
stoichiometry: 1.0
species: s137
type: SpeciesReference

s47
is version of: O13286
has only substance units: false
initial concentration: NaN
is: SBO:0000252
constant: false
in compartment: default
boundary condition: false
type: Species
initial amount: 0.00239076
name: Srw1

re39
kinetic law: CDMT00142
modifier: CDMT00141
product: CDMT00140
reactant: CDMT00139
is: SBO:0000344
fast: false
reversible: false
type: Reaction

kdci1 dash
is: SBO:0000356
constant: true
value: 5.0
name: kdci1'
type: Parameter

CDMT00215
stoichiometry: 1.0
species: s92
type: SpeciesReference

Cdc25T
is: SBO:0000196
constant: true
value: 1.0
name: Cdc25T
type: Parameter

kasrw
is: SBO:0000363
constant: true
value: 1.25
name: kasrw
type: Parameter

kdci1 dash2
is: SBO:0000356
constant: true
value: 0.2
name: kdci1''
type: Parameter

CDMT00093
stoichiometry: 1.0
species: s67
type: SpeciesReference

re3
kinetic law: CDMT00005
modifier: CDMT00004
product: CDMT00003
reactant: CDMT00002
is: SBO:0000344
fast: false
reversible: false
type: Reaction

volume
unit: CDMT00224
name: volume
type: SBMLUnitsDef

CDMT00200
stoichiometry: 1.0
species: s137
type: SpeciesReference

s4
is: SBO:0000252
constant: true
type: Species
initial concentration: NaN
boundary condition: true
in compartment: default
has only substance units: false
is version of: P40380
name: Vdrum
initial amount: 0.0

ksrum
is: SBO:0000009
constant: true
value: 1.0
name: ksrum
type: Parameter

s46
is: SBO:0000291
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: 0.0
in compartment: default
name: sa4_degraded
type: Species

CDMT00214
stoichiometry: 1.0
species: s91
type: SpeciesReference

re17
reactant: CDMT00046
kinetic law: CDMT00050
is: SBO:0000180
reversible: false
product: CDMT00048
fast: false
type: Reaction
modifier: CDMT00049
product: CDMT00047

CDMT00080
stoichiometry: 1.0
species: s63
type: SpeciesReference

CDMT00013
stoichiometry: 1.0
species: s51
type: SpeciesReference

kdcycsrw
is: SBO:0000356
constant: true
value: 1.0
name: kdcycsrw
type: Parameter

s49
type: Species
boundary condition: false
is version of: P25009
initial concentration: NaN
in compartment: default
name: Puc1
initial amount: 0.0
has only substance units: false
is: SBO:0000252
constant: false

Jic10
is: SBO:0000261
constant: true
value: 0.01
name: Jic10
type: Parameter

CDMT00203
stoichiometry: 1.0
species: s61
type: SpeciesReference

re37
fast: false
type: Reaction
is: SBO:0000179
reactant: CDMT00130
kinetic law: CDMT00134
modifier: CDMT00133
reversible: false
product: CDMT00131
modifier: CDMT00132

CDMT00033
stoichiometry: 1.0
species: s61
type: SpeciesReference

kori
is: SBO:0000009
constant: true
value: 125.0
name: kori
type: Parameter

CDMT00081
stoichiometry: 1.0
species: s153
type: SpeciesReference

re18
product: CDMT00052
kinetic law: CDMT00055
type: Reaction
modifier: CDMT00053
reactant: CDMT00051
name: Cdc13_Dephosphorylation
reversible: false
fast: false
modifier: CDMT00054
is: SBO:0000330

kdci1
is: SBO:0000356
constant: true
value: 0.1
name: kdci1
type: Parameter

s48
has only substance units: false
initial amount: 6.33821E-5
is: SBO:0000252
constant: false
is version of: P78972
type: Species
in compartment: default
name: Slp1A
boundary condition: false
initial concentration: NaN

CDMT00202
stoichiometry: 1.0
species: s166
type: SpeciesReference

kscig dash
is: SBO:0000009
constant: true
value: 0.04
name: kscig'
type: Parameter

re38
kinetic law: CDMT00138
modifier: CDMT00137
product: CDMT00136
reactant: CDMT00135
is: SBO:0000344
fast: false
reversible: false
type: Reaction

kipre dash
is: SBO:0000261
constant: true
value: 1.0
name: kipre'
type: Parameter

kscyc
is: SBO:0000009
constant: true
value: 0.03
name: kscyc
type: Parameter

kdcig dash
is: SBO:0000356
constant: true
value: 1.0
name: kdcig'
type: Parameter

CDMT00032
stoichiometry: 1.0
species: s60
type: SpeciesReference

given: Vijayalakshmi
family: Chelliah

orgname: EMBL-EBI