28
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: VaA536
type: Species

687233
is: SBO:0000010
stoichiometry: 1.0
species: 6
type: SpeciesReference

687135
is: SBO:0000010
stoichiometry: 1.0
species: 2
type: SpeciesReference

687620
is: SBO:0000010
stoichiometry: 1.0
species: 9
type: SpeciesReference

38
kinetic law: 687499
product: 687487
reactant: 687475
fast: false
reversible: false
name: r8
type: Reaction

687547
is: SBO:0000010
stoichiometry: 1.0
species: 11
type: SpeciesReference

687160
is: SBO:0000011
stoichiometry: 1.0
species: 3
type: SpeciesReference

687208
is: SBO:0000011
stoichiometry: 1.0
species: 5
type: SpeciesReference

9
has part: P04070
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: Va53_APC
type: Species

69
is: SBO:0000035
constant: true
value: 0.028
name: k7
type: Parameter

27
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: VaA36
type: Species

37
kinetic law: 687463
product: 687451
reactant: 687439
reactant: 687427
fast: false
reversible: true
name: r7
type: Reaction

10
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: Va56
type: Species

40
kinetic law: 687571
product: 687559
reactant: 687547
fast: false
reversible: false
name: r10
type: Reaction

50
kinetic law: 687982
product: 687969
product: 687957
reactant: 687945
fast: false
reversible: true
name: r20
type: Reaction

687692
is: SBO:0000010
stoichiometry: 1.0
species: 5
type: SpeciesReference

688151
is: SBO:0000010
stoichiometry: 1.0
species: 1
type: SpeciesReference

26
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: VaA53
type: Species

11
has part: P04070
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: Va56_APC
type: Species

687632
is: SBO:0000011
stoichiometry: 1.0
species: 15
type: SpeciesReference

687147
is: SBO:0000010
stoichiometry: 1.0
species: 1
type: SpeciesReference

687921
is: SBO:0000011
stoichiometry: 1.0
species: 17
type: SpeciesReference

687487
is: SBO:0000011
stoichiometry: 1.0
species: 7
type: SpeciesReference

51
kinetic law: 688030
product: 688018
product: 688006
reactant: 687994
fast: false
reversible: true
name: r21
type: Reaction

25
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: VaA3
type: Species

687848
is: SBO:0000010
stoichiometry: 1.0
species: 6
type: SpeciesReference

12
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: Va36
type: Species

39
kinetic law: 687535
product: 687523
reactant: 687511
fast: false
reversible: false
name: r9
type: Reaction

688477
is: SBO:0000010
stoichiometry: 1.0
species: 13
type: SpeciesReference

687897
is: SBO:0000010
stoichiometry: 1.0
species: 4
type: SpeciesReference

688211
is: SBO:0000011
stoichiometry: 1.0
species: 29
type: SpeciesReference

688115
is: SBO:0000011
stoichiometry: 1.0
species: 17
type: SpeciesReference

52
kinetic law: 688078
product: 688066
product: 688054
reactant: 688042
fast: false
reversible: true
name: r22
type: Reaction

687427
is: SBO:0000010
stoichiometry: 1.0
species: 14
type: SpeciesReference

687475
is: SBO:0000010
stoichiometry: 1.0
species: 3
type: SpeciesReference

687523
is: SBO:0000011
stoichiometry: 1.0
species: 11
type: SpeciesReference

65
is: SBO:0000038
constant: true
value: 0.7
name: k2
type: Parameter

688103
is: SBO:0000011
stoichiometry: 1.0
species: 22
type: SpeciesReference

687281
is: SBO:0000010
stoichiometry: 1.0
species: 8
type: SpeciesReference

688054
is: SBO:0000011
stoichiometry: 1.0
species: 21
type: SpeciesReference

688441
is: SBO:0000011
stoichiometry: 1.0
species: 26
type: SpeciesReference

688018
is: SBO:0000011
stoichiometry: 1.0
species: 17
type: SpeciesReference

66
is: SBO:0000035
constant: true
value: 0.064
name: k3
type: Parameter

687184
is: SBO:0000010
stoichiometry: 1.0
species: 4
type: SpeciesReference

687945
is: SBO:0000010
stoichiometry: 1.0
species: 10
type: SpeciesReference

687439
is: SBO:0000010
stoichiometry: 1.0
species: 1
type: SpeciesReference

687511
is: SBO:0000010
stoichiometry: 1.0
species: 7
type: SpeciesReference

687379
is: SBO:0000010
stoichiometry: 1.0
species: 12
type: SpeciesReference

67
is: SBO:0000035
constant: true
value: 1.0
name: k5
type: Parameter

687776
is: SBO:0000011
stoichiometry: 1.0
species: 9
type: SpeciesReference

BIOMD0000000365
species: 14
species: 12
type: SBMLModel
parameter: 68
reaction: 31
parameter: 65
parameter: 71
reaction: 52
is described by: http://identifiers.org/pubmed/10346914
species: 22
species: 5
species: 6
curated: true
reaction: 55
species: 1
reaction: 60
reaction: 34
reaction: 63
species: 18
parameter: 64
reaction: 37
reaction: 42
reaction: 58
volume units: 498095
reaction: 48
species: 28
species: 27
species: 13
species: 11
reaction: 45
species: 21
is: GO:0007596
reaction: 32
parameter: 66
parameter: 72
reaction: 35
parameter: 69
reaction: 40
reaction: 50
reaction: 56
species: 3
species: 4
species: 30
species: 17
reaction: 43
reaction: 53
reaction: 59
reaction: 61
reaction: 38
species: 16
occurs in: http://identifiers.org/taxonomy/2759
species: 10
parameter: 67
reaction: 46
species: 25
species: 23
species: 26
species: 24
species: 9
species: 7
species: 8
compartment: 73
reaction: 51
reaction: 49
species: 20
time units: 628102
substance units: 671381
reaction: 36
parameter: 70
reaction: 33
reaction: 39
reaction: 44
reaction: 54
species: 19
is: MODEL1108260001
species: 2
species: 29
species: 15
name: Hockin1999_BloodCoagulation_VaInactivation
area units: 498119

688163
is: SBO:0000011
stoichiometry: 1.0
species: 23
type: SpeciesReference

688308
is: SBO:0000011
stoichiometry: 1.0
species: 29
type: SpeciesReference

688066
is: SBO:0000011
stoichiometry: 1.0
species: 17
type: SpeciesReference

687873
is: SBO:0000011
stoichiometry: 1.0
species: 17
type: SpeciesReference

29
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: VaLCA1
type: Species

68
is: SBO:0000035
constant: true
value: 5.2E-4
name: k6
type: Parameter

687824
is: SBO:0000011
stoichiometry: 1.0
species: 17
type: SpeciesReference

687196
is: SBO:0000010
stoichiometry: 1.0
species: 1
type: SpeciesReference

49
kinetic law: 687933
product: 687921
product: 687909
reactant: 687897
fast: false
reversible: true
name: r19
type: Reaction

688453
is: SBO:0000011
stoichiometry: 1.0
species: 30
type: SpeciesReference

688357
is: SBO:0000011
stoichiometry: 1.0
species: 29
type: SpeciesReference

687451
is: SBO:0000011
stoichiometry: 1.0
species: 15
type: SpeciesReference

688260
is: SBO:0000011
stoichiometry: 1.0
species: 29
type: SpeciesReference

688006
is: SBO:0000011
stoichiometry: 1.0
species: 24
type: SpeciesReference

58
kinetic law: 688369
product: 688357
product: 688345
reactant: 688332
fast: false
reversible: true
name: r28
type: Reaction

62
kinetic law: 688561
product: 688549
product: 688537
reactant: 688525
fast: false
reversible: true
name: r32
type: Reaction

1
is: P04070
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.0E-8
initial amount: NaN
in compartment: 73
name: APC
type: Species

48
kinetic law: 687885
product: 687873
product: 687860
reactant: 687848
fast: false
reversible: true
name: r18
type: Reaction

30
has part: P04070
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: VaLCA1_APC
type: Species

17
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: LC
type: Species

20
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: HC56
type: Species

687293
is: SBO:0000010
stoichiometry: 1.0
species: 1
type: SpeciesReference

57
kinetic law: 688320
product: 688308
product: 688296
reactant: 688284
fast: false
reversible: true
name: r27
type: Reaction

61
kinetic law: 688513
product: 688501
product: 688489
reactant: 688477
fast: false
reversible: true
name: r31
type: Reaction

688573
is: SBO:0000010
stoichiometry: 1.0
species: 29
type: SpeciesReference

2
is: P12259
constant: false
boundary condition: false
has only substance units: false
initial concentration: 2.0E-7
initial amount: NaN
in compartment: 73
name: Va
type: Species

688332
is: SBO:0000010
stoichiometry: 1.0
species: 14
type: SpeciesReference

47
kinetic law: 687836
product: 687824
product: 687812
reactant: 687800
fast: false
reversible: true
name: r17
type: Reaction

688405
is: SBO:0000011
stoichiometry: 1.0
species: 30
type: SpeciesReference

688284
is: SBO:0000010
stoichiometry: 1.0
species: 12
type: SpeciesReference

18
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: HC5
type: Species

687403
is: SBO:0000011
stoichiometry: 1.0
species: 13
type: SpeciesReference

688345
is: SBO:0000011
stoichiometry: 1.0
species: 28
type: SpeciesReference

64
is: SBO:0000036
constant: true
value: 1.0E8
name: k1
type: Parameter

688501
is: SBO:0000011
stoichiometry: 1.0
species: 30
type: SpeciesReference

46
kinetic law: 687788
product: 687776
reactant: 687764
fast: false
reversible: false
name: r16
type: Reaction

687704
is: SBO:0000011
stoichiometry: 1.0
species: 13
type: SpeciesReference

19
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: HC3
type: Species

3
has only substance units: false
has part: P12259
initial concentration: 0.0
name: Va_APC
boundary condition: false
initial amount: NaN
type: Species
in compartment: 73
has part: P04070
constant: false

687354
is: SBO:0000011
stoichiometry: 1.0
species: 11
type: SpeciesReference

32
kinetic law: 687221
product: 687208
reactant: 687196
reactant: 687184
fast: false
reversible: true
name: r2
type: Reaction

687764
is: SBO:0000010
stoichiometry: 1.0
species: 5
type: SpeciesReference

687668
is: SBO:0000011
stoichiometry: 1.0
species: 5
type: SpeciesReference

59
kinetic law: 688417
product: 688405
product: 688393
reactant: 688381
fast: false
reversible: true
name: r29
type: Reaction

63
kinetic law: 688609
product: 688597
reactant: 688585
reactant: 688573
fast: false
reversible: true
name: r33
type: Reaction

688585
is: SBO:0000010
stoichiometry: 1.0
species: 1
type: SpeciesReference

45
kinetic law: 687752
product: 687740
reactant: 687728
fast: false
reversible: false
name: r15
type: Reaction

73
constant: true
size: 1.0
spatial dimensions: 3.0
name: compartment_1
type: Compartment

4
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: Va3
type: Species

31
kinetic law: 687172
product: 687160
reactant: 687147
reactant: 687135
fast: false
reversible: true
name: r1
type: Reaction

687860
is: SBO:0000011
stoichiometry: 1.0
species: 18
type: SpeciesReference

688091
is: SBO:0000010
stoichiometry: 1.0
species: 14
type: SpeciesReference

688248
is: SBO:0000011
stoichiometry: 1.0
species: 26
type: SpeciesReference

687800
is: SBO:0000010
stoichiometry: 1.0
species: 2
type: SpeciesReference

5
has part: P04070
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: Va3_APC
type: Species

44
kinetic law: 687716
product: 687704
reactant: 687692
fast: false
reversible: false
name: r14
type: Reaction

72
is: SBO:0000039
constant: true
value: 2630.0
name: k10
type: Parameter

54
kinetic law: 688175
product: 688163
reactant: 688151
reactant: 688139
fast: false
reversible: true
name: r24
type: Reaction

688235
is: SBO:0000010
stoichiometry: 1.0
species: 8
type: SpeciesReference

687342
is: SBO:0000010
stoichiometry: 1.0
species: 1
type: SpeciesReference

34
kinetic law: 687318
product: 687305
reactant: 687293
reactant: 687281
fast: false
reversible: true
name: r4
type: Reaction

688042
is: SBO:0000010
stoichiometry: 1.0
species: 12
type: SpeciesReference

688537
is: SBO:0000011
stoichiometry: 1.0
species: 28
type: SpeciesReference

687583
is: SBO:0000010
stoichiometry: 1.0
species: 7
type: SpeciesReference

688187
is: SBO:0000010
stoichiometry: 1.0
species: 4
type: SpeciesReference

13
has part: P04070
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: Va36_APC
type: Species

24
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: HC53
type: Species

688429
is: SBO:0000010
stoichiometry: 1.0
species: 9
type: SpeciesReference

53
kinetic law: 688127
product: 688115
product: 688103
reactant: 688091
fast: false
reversible: true
name: r23
type: Reaction

6
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: Va5
type: Species

71
is: SBO:0000035
constant: true
value: 1.72E-5
name: k9
type: Parameter

687994
is: SBO:0000010
stoichiometry: 1.0
species: 8
type: SpeciesReference

43
kinetic law: 687680
product: 687668
reactant: 687656
fast: false
reversible: false
name: r13
type: Reaction

688381
is: SBO:0000010
stoichiometry: 1.0
species: 5
type: SpeciesReference

688597
is: SBO:0000011
stoichiometry: 1.0
species: 30
type: SpeciesReference

687257
is: SBO:0000011
stoichiometry: 1.0
species: 7
type: SpeciesReference

687305
is: SBO:0000011
stoichiometry: 1.0
species: 9
type: SpeciesReference

33
kinetic law: 687269
product: 687257
reactant: 687245
reactant: 687233
fast: false
reversible: true
name: r3
type: Reaction

687969
is: SBO:0000011
stoichiometry: 1.0
species: 17
type: SpeciesReference

14
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: Va536
type: Species

687909
is: SBO:0000011
stoichiometry: 1.0
species: 19
type: SpeciesReference

687656
is: SBO:0000010
stoichiometry: 1.0
species: 3
type: SpeciesReference

23
has part: P04070
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: LC_APC
type: Species

70
is: SBO:0000039
constant: true
value: 2570.0
name: k8
type: Parameter

7
has part: P04070
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: Va5_APC
type: Species

687391
is: SBO:0000010
stoichiometry: 1.0
species: 1
type: SpeciesReference

687728
is: SBO:0000010
stoichiometry: 1.0
species: 13
type: SpeciesReference

687330
is: SBO:0000010
stoichiometry: 1.0
species: 10
type: SpeciesReference

688139
is: SBO:0000010
stoichiometry: 1.0
species: 17
type: SpeciesReference

56
kinetic law: 688272
product: 688260
product: 688248
reactant: 688235
fast: false
reversible: true
name: r26
type: Reaction

42
kinetic law: 687644
product: 687632
reactant: 687620
fast: false
reversible: false
name: r12
type: Reaction

60
kinetic law: 688465
product: 688453
product: 688441
reactant: 688429
fast: false
reversible: true
name: r30
type: Reaction

687812
is: SBO:0000011
stoichiometry: 1.0
species: 16
type: SpeciesReference

688489
is: SBO:0000011
stoichiometry: 1.0
species: 27
type: SpeciesReference

688525
is: SBO:0000010
stoichiometry: 1.0
species: 15
type: SpeciesReference

36
kinetic law: 687415
product: 687403
reactant: 687391
reactant: 687379
fast: false
reversible: true
name: r6
type: Reaction

15
has part: P04070
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: Va536_APC
type: Species

22
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: HC536
type: Species

688549
is: SBO:0000011
stoichiometry: 1.0
species: 30
type: SpeciesReference

688199
is: SBO:0000011
stoichiometry: 1.0
species: 25
type: SpeciesReference

688393
is: SBO:0000011
stoichiometry: 1.0
species: 25
type: SpeciesReference

8
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: Va53
type: Species

688296
is: SBO:0000011
stoichiometry: 1.0
species: 27
type: SpeciesReference

55
kinetic law: 688223
product: 688211
product: 688199
reactant: 688187
fast: false
reversible: true
name: r25
type: Reaction

41
kinetic law: 687608
product: 687596
reactant: 687583
fast: false
reversible: false
name: r11
type: Reaction

687559
is: SBO:0000011
stoichiometry: 1.0
species: 15
type: SpeciesReference

687596
is: SBO:0000011
stoichiometry: 1.0
species: 9
type: SpeciesReference

21
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: HC36
type: Species

35
kinetic law: 687366
product: 687354
reactant: 687342
reactant: 687330
fast: false
reversible: true
name: r5
type: Reaction

687245
is: SBO:0000010
stoichiometry: 1.0
species: 1
type: SpeciesReference

687957
is: SBO:0000011
stoichiometry: 1.0
species: 20
type: SpeciesReference

16
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 73
name: HC
type: Species

687740
is: SBO:0000011
stoichiometry: 1.0
species: 15
type: SpeciesReference

given: Michael
family: Schubert

ORG:
  orgname: EBI

W3 CDTF: Fri Apr 20 21:02:12 BST 2012

W3 CDTF: Fri Aug 26 17:38:00 BST 2011