metaid_0000029
constant: true
value: 1.0E-22
name: j1
type: Parameter

342634
stoichiometry: 1.0
species: metaid_0000105
type: SpeciesReference

metaid_0000106
is version of: P0A9C5
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.014
initial amount: NaN
in compartment: metaid_0000097
name: GS
type: Species

metaid_0000009
constant: true
value: 0.04
name: Kututp
type: Parameter

metaid_0000126
fast: false
name: vad
reversible: true
modifier: 343056
modifier: 343068
reactant: 343030
type: Reaction
product: 343043
modifier: 343080
is version of: GO:0018117
kinetic law: 343092

metaid_0000116
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.1
initial amount: NaN
in compartment: metaid_0000097
name: AZglu
type: Species

343237
stoichiometry: 1.0
species: metaid_0000112
type: SpeciesReference

metaid_0000107
has only substance units: false
initial amount: NaN
initial concentration: 0.0
constant: false
name: AMP
type: Species
is version of: CHEBI:16027
is version of: C00020
in compartment: metaid_0000097
boundary condition: false

343043
stoichiometry: 1.0
species: metaid_0000107
type: SpeciesReference

343453
stoichiometry: 1.0
species: metaid_0000113
type: SpeciesReference

metaid_0000127
reactant: 343105
name: vdead
modifier: 343165
kinetic law: 343177
modifier: 343129
modifier: 343141
modifier: 343153
reversible: true
type: Reaction
fast: false
product: 343117

342898
stoichiometry: 1.0
species: metaid_0000101
type: SpeciesReference

metaid_0000117
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.0
initial amount: NaN
in compartment: metaid_0000097
name: AZGLN
type: Species

metaid_0000108
type: Species
initial concentration: 0.05
constant: true
name: NH4
boundary condition: true
is version of: CHEBI:28938
is version of: C01342
has only substance units: false
initial amount: NaN
in compartment: metaid_0000097

343030
stoichiometry: 1.0
species: metaid_0000106
type: SpeciesReference

343549
stoichiometry: 1.0
species: metaid_0000117
type: SpeciesReference

342790
stoichiometry: 1.0
species: metaid_0000103
type: SpeciesReference

metaid_0000128
fast: false
name: vgdh
reactant: 343213
reversible: true
type: Reaction
reactant: 343201
product: 343237
reactant: 343189
kinetic law: 343249
product: 343225

metaid_0000146
unit: 342478
name: mins
type: SBMLUnitsDef

ORG:
  orgname: EMBL-EBI
n:
  given: Lukas
  family: Endler

metaid_0000114
is version of: C00002
initial concentration: 2.685
boundary condition: false
name: ATP
has only substance units: false
type: Species
in compartment: metaid_0000097
is version of: CHEBI:15422
initial amount: NaN
constant: false

metaid_0000109
is version of: P0AEX3
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.2
initial amount: NaN
in compartment: metaid_0000097
name: KG
type: Species

BIOMD0000000217
species: metaid_0000115
species: metaid_0000113
reaction: metaid_0000123
type: SBMLModel
parameter: metaid_0000076
parameter: metaid_0000008
parameter: metaid_0000078
species: metaid_0000103
species: metaid_0000101
reaction: metaid_0000135
parameter: metaid_0000095
parameter: metaid_0000029
parameter: metaid_0000010
parameter: metaid_0000012
curated: true
parameter: metaid_0000033
units def: metaid_0000146
parameter: metaid_0000024
reaction: metaid_0000127
parameter: metaid_0000040
parameter: metaid_0000060
species: metaid_0000099
parameter: metaid_0000045
parameter: metaid_0000053
parameter: metaid_0000055
species: metaid_0000111
reaction: metaid_0000121
parameter: metaid_0000071
parameter: metaid_0000038
parameter: metaid_0000058
parameter: metaid_0000074
parameter: metaid_0000006
parameter: metaid_0000139
parameter: metaid_0000065
parameter: metaid_0000067
reaction: metaid_0000131
reaction: metaid_0000133
parameter: metaid_0000083
parameter: metaid_0000093
parameter: metaid_0000086
parameter: metaid_0000018
parameter: metaid_0000088
parameter: metaid_0000096
parameter: metaid_0000143
rule: metaid_0000145
occurs in: http://identifiers.org/taxonomy/562
species: metaid_0000104
parameter: metaid_0000020
parameter: metaid_0000022
volume units: metaid_0000069
parameter: metaid_0000015
rule: metaid_0000144
parameter: metaid_0000031
parameter: metaid_0000051
substance units: metaid_0000088
parameter: metaid_0000036
parameter: metaid_0000027
parameter: metaid_0000043
parameter: metaid_0000072
parameter: metaid_0000063
parameter: metaid_0000081
parameter: metaid_0000048
species: metaid_0000118
parameter: metaid_0000091
length unit: length
parameter: metaid_0000084
reaction: metaid_0000124
species: metaid_0000102
parameter: metaid_0000009
parameter: metaid_0000079
is version of: GO:0019676
species: metaid_0000100
parameter: metaid_0000003
parameter: metaid_0000013
species: metaid_0000106
species: metaid_0000109
units def: metaid_0000147
parameter: metaid_0000032
parameter: metaid_0000034
parameter: metaid_0000025

metaid_0000147
unit: 342502
unit: 342490
name: mM
type: SBMLUnitsDef

342694
stoichiometry: 1.0
species: metaid_0000100
type: SpeciesReference

metaid_0000129
reactant: 343261
reversible: true
fast: false
modifier: 343321
reactant: 343285
name: vgog
type: Reaction
reactant: 343273
product: 343297
kinetic law: 343333
product: 343309

metaid_0000115
in compartment: metaid_0000097
name: ADP
has only substance units: false
type: Species
initial concentration: 2.685
is version of: C00008
initial amount: NaN
constant: false
is version of: CHEBI:16761
boundary condition: false

343297
stoichiometry: 2.0
species: metaid_0000111
type: SpeciesReference

342730
stoichiometry: 1.0
species: metaid_0000101
type: SpeciesReference

metaid_0000071
constant: true
value: 8.0
name: Kgludemglu
type: Parameter

metaid_0000059
constant: true
value: 10.8688
name: damp
type: Parameter

metaid_0000102
is version of: C00303
initial concentration: 1.0
has only substance units: false
constant: false
initial amount: NaN
in compartment: metaid_0000097
boundary condition: false
is version of: CHEBI:30011
type: Species
name: GLN

metaid_0000044
constant: true
value: 0.04
name: Kgdhnadph
type: Parameter

metaid_0000069
constant: true
units: dimensionless
value: 460.0
name: Keq
type: Parameter

343381
stoichiometry: 1.0
species: metaid_0000119
type: SpeciesReference

metaid_0000081
constant: true
value: 0.5
name: Kazglndemazinter
type: Parameter

343213
stoichiometry: 1.0
species: metaid_0000110
type: SpeciesReference

metaid_0000019
constant: true
value: 0.0387
name: d1
type: Parameter

342718
stoichiometry: 1.0
species: metaid_0000103
type: SpeciesReference

metaid_0000005
constant: true
value: 0.07
name: Kglnut
type: Parameter

metaid_0000003
constant: true
value: 6.0E-4
name: UT
type: Parameter

metaid_0000043
constant: true
value: 10.0
name: Kgdhglu
type: Parameter

metaid_0000070
constant: true
value: 120.0
name: Vgludem
type: Parameter

metaid_0000103
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000097
name: PIIUMP2
type: Species

metaid_0000098
is version of: P0A9Z1
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.003
initial amount: NaN
in compartment: metaid_0000097
name: PII
type: Species

metaid_0000080
constant: true
value: 1.0E10
name: Kazglndemeq
type: Parameter

metaid_0000004
constant: true
value: 137.0
name: kcatut
type: Parameter

metaid_0000006
constant: true
value: 0.0018
name: Kutipii
type: Parameter

metaid_0000099
initial concentration: 0.5
name: UTP
has only substance units: false
type: Species
is version of: C00075
in compartment: metaid_0000097
constant: true
is version of: CHEBI:15713
initial amount: NaN
boundary condition: true

metaid_0000042
constant: true
value: 1.1
name: Kgdhnh
type: Parameter

metaid_0000104
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000097
name: PIIUMP3
type: Species

metaid_0000057
constant: true
value: 2.3667
name: bamp
type: Parameter

343393
stoichiometry: 1.0
species: metaid_0000102
type: SpeciesReference

343225
stoichiometry: 1.0
species: metaid_0000111
type: SpeciesReference

metaid_0000083
constant: true
value: 0.3
name: Kazgludemazglu
type: Parameter

metaid_0000097
constant: true
size: 1.0
spatial dimensions: 3.0
name: compartment
type: Compartment

metaid_0000031
constant: true
value: 0.02316
name: l1
type: Parameter

342706
stoichiometry: 1.0
species: metaid_0000099
type: SpeciesReference

342970
stoichiometry: 1.0
species: metaid_0000103
type: SpeciesReference

metaid_0000007
constant: true
value: 0.003
name: Kutpii
type: Parameter

metaid_0000017
constant: true
value: 0.5166
name: b1
type: Parameter

metaid_0000118
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.1
initial amount: NaN
in compartment: metaid_0000097
name: AZgln
type: Species

343525
stoichiometry: 1.0
species: metaid_0000117
type: SpeciesReference

metaid_0000041
constant: true
value: 0.32
name: Kgdhkg
type: Parameter

metaid_0000058
constant: true
value: 0.1012
name: camp
type: Parameter

metaid_0000142
constant: false
value: NaN
name: PIIKG1
type: Parameter

metaid_0000105
type: Species
in compartment: metaid_0000097
boundary condition: true
has only substance units: false
initial concentration: 0.01
initial amount: NaN
is version of: CHEBI:16695
name: UMP
is version of: C00105
constant: true

342982
stoichiometry: 1.0
species: metaid_0000105
type: SpeciesReference

metaid_0000082
constant: true
value: 30.0
name: Vazgludem
type: Parameter

metaid_0000096
constant: true
value: 0.15
name: Kd3piiump
type: Parameter

metaid_0000030
constant: true
value: 1.0E-22
name: k1
type: Parameter

metaid_0000119
is version of: CHEBI:43474
constant: false
boundary condition: true
has only substance units: false
initial concentration: 10.0
initial amount: NaN
in compartment: metaid_0000097
name: P_i
type: Species

metaid_0000018
constant: true
value: 0.5974
name: c1
type: Parameter

metaid_0000008
constant: true
value: 0.0035
name: Kutpiiump
type: Parameter

metaid_0000040
constant: true
value: 360.0
name: Vgdh
type: Parameter

metaid_0000143
constant: false
value: NaN
name: PIIUMP3KG3
type: Parameter

343441
stoichiometry: 1.0
species: metaid_0000111
type: SpeciesReference

metaid_0000054
constant: true
value: 0.65
name: Kgogaz
type: Parameter

metaid_0000028
constant: true
value: 1.0E-22
name: i1
type: Parameter

metaid_0000121
modifier: 342646
reversible: true
product: 342622
modifier: 342658
reactant: 342610
product: 342634
fast: false
type: Reaction
modifier: 342670
is version of: GO:0008773
kinetic law: 342682
name: vur1

metaid_0000014
constant: true
value: 8.4
name: Kurump
type: Parameter

metaid_0000064
constant: true
value: 4.1
name: Kgsglu
type: Parameter

343261
stoichiometry: 1.0
species: metaid_0000102
type: SpeciesReference

metaid_0000101
is version of: CHEBI:18361
boundary condition: true
initial amount: NaN
initial concentration: 0.05
in compartment: metaid_0000097
has only substance units: false
type: Species
constant: true
name: PPi
is version of: C00013

metaid_0000034
constant: true
value: 0.8791
name: o1
type: Parameter

343357
stoichiometry: 1.0
species: metaid_0000114
type: SpeciesReference

metaid_0000094
constant: true
value: 0.025
name: Kd1piiump
type: Parameter

metaid_0000120
is version of: GO:0008773
name: vut1
type: Reaction
modifier: 342562
product: 342550
reactant: 342514
modifier: 342574
reactant: 342526
modifier: 342586
kinetic law: 342598
product: 342538
reversible: true
fast: false

metaid_0000084
constant: true
units: dimensionless
value: 1.0E10
name: Kazgludemeq
type: Parameter

metaid_0000048
constant: true
value: 85.0
name: Vgog
type: Parameter

metaid_0000130
kinetic law: 343429
reactant: 343357
reactant: 343369
fast: false
product: 343381
reversible: true
modifier: 343417
product: 343393
name: vgs
type: Reaction
product: 343405
reactant: 343345

metaid_0000074
constant: true
value: 70.0
name: Vglndem
type: Parameter

metaid_0000111
is version of: C00025
name: GLU
in compartment: metaid_0000097
has only substance units: false
constant: false
initial amount: NaN
type: Species
boundary condition: false
initial concentration: 1.0
is version of: CHEBI:16015

342814
stoichiometry: 1.0
species: metaid_0000105
type: SpeciesReference

metaid_0000055
constant: true
value: 600.0
name: Vgs
type: Parameter

343585
stoichiometry: 1.0
species: metaid_0000115
type: SpeciesReference

342502
exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

343513
stoichiometry: 1.0
species: metaid_0000102
type: SpeciesReference

metaid_0000027
constant: true
value: 0.2148
name: h1
type: Parameter

metaid_0000013
constant: true
value: 0.0023
name: Kurpiiump
type: Parameter

metaid_0000032
constant: true
value: 0.8821
name: m1
type: Parameter

metaid_0000065
constant: true
value: 0.1
name: Kgsnh
type: Parameter

metaid_0000066
constant: true
value: 0.0585
name: Kgsadp
type: Parameter

metaid_0000100
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000097
name: PIIUMP
type: Species

metaid_0000033
constant: true
value: 8.491
name: n1
type: Parameter

342958
stoichiometry: 1.0
species: metaid_0000104
type: SpeciesReference

metaid_0000085
constant: true
units: dimensionless
value: 0.5
name: Kazgludemazinter
type: Parameter

metaid_0000095
constant: true
value: 0.15
name: Kd2piiump
type: Parameter

metaid_0000075
constant: true
value: 2.0
name: Kglndemgln
type: Parameter

343117
stoichiometry: 1.0
species: metaid_0000106
type: SpeciesReference

W3 CDTF: Thu Aug 09 17:34:03 BST 2012

metaid_0000056
constant: true
value: 10.0
name: aamp
type: Parameter

metaid_0000110
in compartment: metaid_0000097
boundary condition: true
is version of: C00005
has only substance units: false
constant: true
initial concentration: 0.15
initial amount: NaN
is version of: CHEBI:16474
type: Species
name: NADPH

metaid_0000047
constant: true
value: 2.5
name: Kgdhazglu
type: Parameter

metaid_0000133
kinetic law: 343537
product: 343525
reactant: 343513
fast: false
reversible: true
name: vglndem
type: Reaction

metaid_0000026
constant: true
value: 3.323
name: g1
type: Parameter

metaid_0000052
constant: true
value: 11.0
name: Kgogglu
type: Parameter

metaid_0000016
constant: true
value: 1.0E-22
name: a1
type: Parameter

342490
exponent: 1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

metaid_0000086
constant: true
value: 100.0
name: Vadp
type: Parameter

342862
stoichiometry: 1.0
species: metaid_0000103
type: SpeciesReference

metaid_0000092
constant: true
value: 0.15
name: Kd2
type: Parameter

343597
stoichiometry: 1.0
species: metaid_0000114
type: SpeciesReference

metaid_0000067
constant: true
value: 3.7
name: Kgspi
type: Parameter

metaid_0000036
constant: true
value: 2.274E-6
name: Kdeadpiikg
type: Parameter

metaid_0000113
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.0
initial amount: NaN
in compartment: metaid_0000097
name: AZGLU
type: Species

342802
stoichiometry: 1.0
species: metaid_0000100
type: SpeciesReference

metaid_0000072
constant: true
value: 1.0E10
name: Kgludemeq
type: Parameter

W3 CDTF: Fri Nov 28 17:24:29 GMT 2008

metaid_0000046
constant: true
value: 1290.0
name: Keqgdh
type: Parameter

343345
stoichiometry: 1.0
species: metaid_0000111
type: SpeciesReference

metaid_0000132
kinetic law: 343501
product: 343489
reactant: 343477
fast: false
reversible: true
name: vazgludem
type: Reaction

metaid_0000025
constant: true
value: 2.766
name: f1
type: Parameter

metaid_0000053
constant: true
value: 0.0037
name: Kgognadp
type: Parameter

343201
stoichiometry: 1.0
species: metaid_0000109
type: SpeciesReference

342514
stoichiometry: 1.0
species: metaid_0000098
type: SpeciesReference

metaid_0000015
constant: true
value: 0.07
name: Kglnur
type: Parameter

metaid_0000088
constant: true
value: 5.37
name: ATPtot
type: Parameter

metaid_0000087
constant: true
value: 0.5
name: Kadp
type: Parameter

343105
stoichiometry: 1.0
species: metaid_0000107
type: SpeciesReference

metaid_0000035
constant: true
value: 0.5
name: Vdead
type: Parameter

metaid_0000093
constant: true
value: 0.15
name: Kd3
type: Parameter

metaid_0000068
constant: true
value: 5.65
name: Kgsgln
type: Parameter

metaid_0000045
constant: true
value: 0.042
name: Kgdhnadp
type: Parameter

metaid_0000112
is version of: CHEBI:18009
in compartment: metaid_0000097
is version of: C00006
initial concentration: 0.05
boundary condition: true
initial amount: NaN
constant: true
name: NADP
has only substance units: false
type: Species

metaid_0000073
constant: true
value: 0.5
name: Kgludemazglu
type: Parameter

metaid_0000131
kinetic law: 343465
product: 343453
reactant: 343441
fast: false
reversible: true
name: vgludem
type: Reaction

metaid_0000060
constant: true
value: 1.1456
name: n1amp
type: Parameter

343189
stoichiometry: 1.0
species: metaid_0000108
type: SpeciesReference

343285
stoichiometry: 1.0
species: metaid_0000109
type: SpeciesReference

metaid_0000089
constant: true
value: 0.014
name: GStot
type: Parameter

metaid_0000125
modifier: 342994
reactant: 342958
kinetic law: 343018
type: Reaction
name: vur3
reversible: true
modifier: 343006
product: 342982
fast: false
product: 342970
is version of: GO:0008773

342550
stoichiometry: 1.0
species: metaid_0000101
type: SpeciesReference

343477
stoichiometry: 1.0
species: metaid_0000113
type: SpeciesReference

metaid_0000079
constant: true
value: 1.0
name: Kazglndemazgln
type: Parameter

metaid_0000135
kinetic law: 343609
product: 343597
reactant: 343585
fast: false
reversible: true
name: vatpase
type: Reaction

metaid_0000050
constant: true
value: 0.007
name: Kgogkg
type: Parameter

343561
stoichiometry: 1.0
species: metaid_0000118
type: SpeciesReference

metaid_0000024
constant: true
value: 1.0E-22
name: e1
type: Parameter

342874
stoichiometry: 1.0
species: metaid_0000099
type: SpeciesReference

metaid_0000090
constant: true
value: 0.003
name: PIItot
type: Parameter

342478
exponent: 1.0
scale: 0
multipler: 60.0
kind: SECOND
type: SBMLUnit

metaid_0000038
constant: true
value: 1.805E-5
name: Kdeadpiiu
type: Parameter

metaid_0000124
reactant: 342862
modifier: 342934
modifier: 342922
name: vut3
type: Reaction
product: 342886
modifier: 342910
reactant: 342874
is version of: GO:0008773
product: 342898
kinetic law: 342946
fast: false
reversible: true

metaid_0000061
constant: true
value: 19.2166
name: n2amp
type: Parameter

metaid_0000051
constant: true
value: 0.0015
name: Kgognadph
type: Parameter

343405
stoichiometry: 1.0
species: metaid_0000115
type: SpeciesReference

metaid_0000134
kinetic law: 343573
product: 343561
reactant: 343549
fast: false
reversible: true
name: vazglndem
type: Reaction

metaid_0000023
constant: true
value: 0.001703
name: Kadgs
type: Parameter

342526
stoichiometry: 1.0
species: metaid_0000099
type: SpeciesReference

ORG:
  orgname: The University of Manchester
n:
  given: Frank
  family: Bruggeman

metaid_0000091
constant: true
value: 0.005
name: Kd1
type: Parameter

342610
stoichiometry: 1.0
species: metaid_0000100
type: SpeciesReference

metaid_0000037
constant: true
value: 0.04444
name: Kdeadgln
type: Parameter

metaid_0000062
constant: true
value: 460.0
name: Kgseq
type: Parameter

343489
stoichiometry: 1.0
species: metaid_0000116
type: SpeciesReference

metaid_0000012
constant: true
value: 5.5
name: kcatur
type: Parameter

metaid_0000123
modifier: 342826
reversible: true
product: 342814
fast: false
name: vur2
modifier: 342838
type: Reaction
product: 342802
is version of: GO:0008773
kinetic law: 342850
reactant: 342790

342886
stoichiometry: 1.0
species: metaid_0000104
type: SpeciesReference

metaid_0000022
constant: true
value: 0.9714
name: Kadgln
type: Parameter

343369
stoichiometry: 1.0
species: metaid_0000108
type: SpeciesReference

metaid_0000077
constant: true
value: 0.25
name: Kglndemazgln
type: Parameter

343273
stoichiometry: 1.0
species: metaid_0000110
type: SpeciesReference

metaid_0000139
constant: false
value: NaN
name: AdenylationStateGS
type: Parameter

metaid_0000076
constant: true
value: 1.0E10
name: Kglndemeq
type: Parameter

metaid_0000021
constant: true
value: 1.052E-5
name: Kadpiikg
type: Parameter

metaid_0000063
constant: true
value: 0.35
name: Kgsatp
type: Parameter

metaid_0000122
modifier: 342754
modifier: 342766
reactant: 342706
is version of: GO:0008773
kinetic law: 342778
type: Reaction
modifier: 342742
product: 342730
reactant: 342694
reversible: true
name: vut2
product: 342718
fast: false

metaid_0000011
constant: true
value: 6.0E-4
name: UR
type: Parameter

343309
stoichiometry: 1.0
species: metaid_0000112
type: SpeciesReference

metaid_0000078
constant: true
value: 20.0
name: Vazglndem
type: Parameter

metaid_0000138
constant: false
value: NaN
name: maxRateGS
type: Parameter

ORG:
  orgname: EMBL-EBI
n:
  given: Vijayalakshmi
  family: Chelliah

342622
stoichiometry: 1.0
species: metaid_0000098
type: SpeciesReference

metaid_0000020
constant: true
value: 0.5
name: Vad
type: Parameter

metaid_0000049
constant: true
value: 0.175
name: Kgoggln
type: Parameter

metaid_0000010
constant: true
value: 0.1135
name: Kutippi
type: Parameter

metaid_0000039
constant: true
value: 2.015E-4
name: Kdeadgsa
type: Parameter

342538
stoichiometry: 1.0
species: metaid_0000100
type: SpeciesReference