metaid_0000042
constant: true
value: 0.1
name: j0
type: Parameter

metaid_0000016
constant: true
value: 10.0
name: b5
type: Parameter

metaid_0000082
kinetic law: 465819
product: 465807
reactant: 465795
is version of: GO:0030163
fast: false
reversible: false
name: R12
type: Reaction

metaid_0000072
kinetic law: 465314
product: 465302
reactant: 465290
is version of: GO:0030163
fast: false
reversible: false
name: R2
type: Reaction

metaid_0000056
encodes: Q92908
is version of: ENSG00000141448
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003
type: Species

465699
stoichiometry: 1.0
species: metaid_0000060
type: SpeciesReference

metaid_0000022
constant: true
value: 0.005
name: d1
type: Parameter

465543
stoichiometry: 1.0
species: metaid_0000057
type: SpeciesReference

metaid_0000087
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003
type: Species

465154
exponent: 1.0
scale: 0
multipler: 1.0
kind: DIMENSIONLESS
type: SBMLUnit

metaid_0000067
is version of: Q99626
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003
type: Species

465326
stoichiometry: 1.0
species: metaid_0000055
type: SpeciesReference

metaid_0000077
kinetic law: 465579
modifier: 465567
product: 465555
reactant: 465543
is version of: GO:0010467
fast: false
reversible: false
name: R7
type: Reaction

465735
stoichiometry: 1.0
species: metaid_0000066
type: SpeciesReference

metaid_0000037
constant: true
value: 5.0
name: h1
type: Parameter

metaid_0000035
constant: true
value: 2.0
name: g1
type: Parameter

metaid_0000041
constant: true
value: 0.1
name: i2
type: Parameter

metaid_0000017
constant: true
value: 0.1
name: gamma1
type: Parameter

metaid_0000081
name: R11
reversible: false
is version of: GO:0010467
modifier: 465771
modifier: 465759
kinetic law: 465783
product: 465735
modifier: 465747
fast: false
reactant: 465723
type: Reaction

metaid_0000069
has part: Q6ZRP7
has part: Q01860
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.1
initial amount: NaN
in compartment: metaid_0000003
type: Species

metaid_0000003
is version of: GO:0005623
constant: true
size: 1.0
spatial dimensions: 3.0
name: cell
type: Compartment

metaid_0000055
encodes: Q6ZRP7
encodes: ENSG00000165661
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003
type: Species

metaid_0000071
modifier: 465254
type: Reaction
modifier: 465230
kinetic law: 465278
name: R1
fast: false
is version of: GO:0010467
reversible: false
modifier: 465217
reactant: 465193
product: 465205
modifier: 465266
modifier: 465242

metaid_0000021
constant: true
value: 0.001
name: d0
type: Parameter

metaid_0000068
is version of: Q15406
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003
type: Species

metaid_0000060
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003
type: Species

metaid_0000078
kinetic law: 465615
product: 465603
reactant: 465591
is version of: GO:0030163
fast: false
reversible: false
name: R8
type: Reaction

metaid_0000036
constant: true
value: 2.0
name: h0
type: Parameter

metaid_0000014
constant: true
value: 0.025
name: b3
type: Parameter

metaid_0000044
constant: true
value: 0.1
name: gamma5
type: Parameter

465687
stoichiometry: 1.0
species: metaid_0000068
type: SpeciesReference

465167
exponent: 1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

465603
stoichiometry: 1.0
species: metaid_0000060
type: SpeciesReference

465507
stoichiometry: 1.0
species: metaid_0000065
type: SpeciesReference

metaid_0000034
constant: true
value: 0.001
name: g0
type: Parameter

metaid_0000024
constant: true
value: 0.05
name: d3
type: Parameter

metaid_0000085
constant: true
value: 10.0
name: q3
type: Parameter

metaid_0000070
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003
type: Species

metaid_0000054
encodes: Q8N7R0
is version of: ENSG00000176654
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003
type: Species

metaid_0000084
constant: true
value: 1.0
name: f4
type: Parameter

metaid_0000004
unit: 465154
name: arb_substance
type: SBMLUnitsDef

metaid_0000065
is version of: Q8N7R0
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003
type: Species

metaid_0000025
constant: true
value: 0.1
name: gamma2
type: Parameter

metaid_0000013
constant: true
value: 0.005
name: b2
type: Parameter

metaid_0000079
name: R9
type: Reaction
product: 465639
fast: false
reversible: false
kinetic law: 465675
modifier: 465663
is version of: GO:0010467
modifier: 465651
reactant: 465627

metaid_0000043
constant: true
value: 0.1
name: j1
type: Parameter

metaid_0000015
constant: true
value: 10.0
name: b4
type: Parameter

metaid_0000033
constant: true
value: 0.1
name: gamma3
type: Parameter

metaid_0000023
constant: true
value: 0.025
name: d2
type: Parameter

465807
stoichiometry: 1.0
species: metaid_0000060
type: SpeciesReference

465386
stoichiometry: 1.0
species: metaid_0000064
type: SpeciesReference

metaid_0000053
encodes: Q01860
is version of: ENSG00000204531
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003
type: Species

metaid_0000083
constant: true
value: 1.0
name: e3
type: Parameter

metaid_0000005
unit: 465167
name: arb_volume
type: SBMLUnitsDef

metaid_0000086
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003
type: Species

metaid_0000066
is version of: Q92908
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003
type: Species

465591
stoichiometry: 1.0
species: metaid_0000067
type: SpeciesReference

metaid_0000047
constant: true
value: 2.5E-4
name: p2
type: Parameter

metaid_0000052
constant: true
value: 0.01
name: gamman
type: Parameter

metaid_0000007
constant: true
value: 0.001
name: a0
type: Parameter

metaid_0000011
constant: true
value: 1.0
name: b0
type: Parameter

metaid_0000073
modifier: 465350
type: Reaction
reactant: 465326
reversible: false
kinetic law: 465374
product: 465338
modifier: 465362
name: R3
is version of: GO:0010467
fast: false

metaid_0000063
is version of: Q01860
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003
type: Species

metaid_0000032
constant: true
value: 10.0
name: f3
type: Parameter

metaid_0000027
constant: true
value: 0.1
name: e1
type: Parameter

BIOMD0000000209
reaction: metaid_0000079
parameter: metaid_0000085
species: metaid_0000060
species: metaid_0000056
parameter: metaid_0000010
parameter: metaid_0000007
parameter: metaid_0000047
units def: metaid_0000004
parameter: metaid_0000024
parameter: metaid_0000034
is version of: GO:0042663
parameter: metaid_0000033
parameter: metaid_0000020
parameter: metaid_0000030
species: metaid_0000053
reaction: metaid_0000074
reaction: metaid_0000073
species: metaid_0000064
is described by: http://identifiers.org/pubmed/18941526
volume units: metaid_0000005
parameter: metaid_0000014
species: metaid_0000061
is version of: GO:0048863
parameter: metaid_0000029
parameter: metaid_0000028
parameter: metaid_0000038
parameter: metaid_0000037
type: SBMLModel
reaction: metaid_0000072
reaction: metaid_0000081
reaction: metaid_0000071
parameter: metaid_0000045
reaction: metaid_0000080
species: metaid_0000087
parameter: metaid_0000041
species: metaid_0000067
parameter: metaid_0000040
parameter: metaid_0000050
time units: metaid_0000006
is version of: GO:0001830
curated: true
species: metaid_0000069
parameter: metaid_0000012
parameter: metaid_0000011
parameter: metaid_0000009
name: Chickarmane2008 - Stem cell lineage determination
parameter: metaid_0000008
parameter: metaid_0000018
parameter: metaid_0000049
parameter: metaid_0000048
parameter: metaid_0000035
parameter: metaid_0000032
species: metaid_0000055
parameter: metaid_0000031
reaction: metaid_0000076
reaction: metaid_0000075
is: MODEL8390025091
units def: metaid_0000005
parameter: metaid_0000016
parameter: metaid_0000015
parameter: metaid_0000021
species: metaid_0000063
species: metaid_0000057
parameter: metaid_0000039
substance units: metaid_0000004
reaction: metaid_0000082
species: metaid_0000059
parameter: metaid_0000046
parameter: metaid_0000043
parameter: metaid_0000042
parameter: metaid_0000052
parameter: metaid_0000051
parameter: metaid_0000025
species: metaid_0000070
is derived from: BIOMD0000000204
species: metaid_0000086
species: metaid_0000066
parameter: metaid_0000013
parameter: metaid_0000019
parameter: metaid_0000083

metaid_0000046
constant: true
value: 1.0
name: p1
type: Parameter

465519
stoichiometry: 1.0
species: metaid_0000060
type: SpeciesReference

W3 CDTF: Fri Dec 05 14:17:42 GMT 2008

metaid_0000051
constant: true
value: 0.1
name: gammag
type: Parameter

465302
stoichiometry: 1.0
species: metaid_0000060
type: SpeciesReference

465435
stoichiometry: 1.0
species: metaid_0000065
type: SpeciesReference

metaid_0000012
constant: true
value: 0.001
name: b1
type: Parameter

465639
stoichiometry: 1.0
species: metaid_0000068
type: SpeciesReference

metaid_0000006
unit: 465180
name: arb_time
type: SBMLUnitsDef

metaid_0000074
kinetic law: 465411
product: 465399
reactant: 465386
is version of: GO:0030163
fast: false
reversible: false
name: R4
type: Reaction

metaid_0000026
constant: true
value: 0.001
name: e0
type: Parameter

metaid_0000064
is version of: Q6ZRP7
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003
type: Species

metaid_0000045
constant: true
value: 0.1
name: p0
type: Parameter

metaid_0000031
constant: true
value: 0.1
name: f2
type: Parameter

465723
stoichiometry: 1.0
species: metaid_0000056
type: SpeciesReference

465338
stoichiometry: 1.0
species: metaid_0000064
type: SpeciesReference

465193
stoichiometry: 1.0
species: metaid_0000053
type: SpeciesReference

metaid_0000050
constant: true
value: 15.0
name: q2
type: Parameter

metaid_0000049
constant: true
value: 2.5E-4
name: q1
type: Parameter

465205
stoichiometry: 1.0
species: metaid_0000063
type: SpeciesReference

metaid_0000059
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003
type: Species

465290
stoichiometry: 1.0
species: metaid_0000063
type: SpeciesReference

metaid_0000080
kinetic law: 465711
product: 465699
reactant: 465687
is version of: GO:0030163
fast: false
reversible: false
name: R10
type: Reaction

metaid_0000040
constant: true
value: 0.1
name: i1
type: Parameter

metaid_0000075
modifier: 465471
modifier: 465459
name: R5
product: 465435
type: Reaction
modifier: 465483
reactant: 465423
modifier: 465447
reversible: false
kinetic law: 465495
fast: false
is version of: GO:0010467

metaid_0000039
constant: true
value: 0.001
name: i0
type: Parameter

465555
stoichiometry: 1.0
species: metaid_0000067
type: SpeciesReference

metaid_0000020
constant: true
value: 0.025
name: c2
type: Parameter

metaid_0000009
constant: true
value: 0.005
name: a2
type: Parameter

metaid_0000030
constant: true
value: 0.1
name: f1
type: Parameter

metaid_0000029
constant: true
value: 0.001
name: f0
type: Parameter

metaid_0000019
constant: true
value: 0.005
name: c1
type: Parameter

metaid_0000061
is version of: P04637
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003
type: Species

465180
exponent: 1.0
scale: 0
multipler: 1.0
kind: DIMENSIONLESS
type: SBMLUnit

metaid_0000048
constant: true
value: 1.0
name: q0
type: Parameter

metaid_0000058
encodes: Q15406
is version of: ENSG00000148200
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003
type: Species

465399
stoichiometry: 1.0
species: metaid_0000060
type: SpeciesReference

metaid_0000038
constant: true
value: 0.1
name: gamma4
type: Parameter

metaid_0000076
kinetic law: 465531
product: 465519
reactant: 465507
is version of: GO:0030163
fast: false
reversible: false
name: R6
type: Reaction

metaid_0000010
constant: true
value: 0.025
name: a3
type: Parameter

metaid_0000057
encodes: Q99626
is version of: ENSG00000165556
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003
type: Species

metaid_0000008
constant: true
value: 1.0
name: a1
type: Parameter

465627
stoichiometry: 1.0
species: metaid_0000058
type: SpeciesReference

metaid_0000018
constant: true
value: 0.001
name: c0
type: Parameter

metaid_0000028
constant: true
value: 0.1
name: e2
type: Parameter

465795
stoichiometry: 1.0
species: metaid_0000066
type: SpeciesReference

metaid_0000062
is version of: GO:0042813
constant: false
boundary condition: true
has only substance units: false
initial concentration: 25.0
initial amount: NaN
in compartment: metaid_0000003
type: Species

465423
stoichiometry: 1.0
species: metaid_0000054
type: SpeciesReference

given: Carsten
family: Peterson

orgname: Lund Strategic Research Centre for Stem Cell Biology and Cell Therapy, Lund University, Sweden.

ORG:
  orgname: Keck Graduate Institute, California
n:
  given: Vijay
  family: Chickarmane

ORG:
  orgname: EMBL-EBI
n:
  given: Vijayalakshmi
  family: Chelliah

W3 CDTF: Wed Jun 05 17:45:56 BST 2013