metaid_0000062
kinetic law: 255518
is version of: GO:0006468
reversible: false
reactant: 255470
product: 255506
product: 255494
fast: false
type: Reaction
reactant: 255482

metaid_0000011
constant: true
units: metaid_0000077
value: 1.0E-4
type: Parameter

metaid_0000072
unit: 254706
unit: 254693
unit: 254681
name: molepsecpdGy
type: SBMLUnitsDef

255482
stoichiometry: 1.0
species: metaid_0000030
type: SpeciesReference

255045
stoichiometry: 1.0
species: metaid_0000028
type: SpeciesReference

metaid_0000053
kinetic law: 255081
product: 255069
product: 255057
reactant: 255045
is version of: GO:0006402
fast: false
reversible: false
type: Reaction

255603
stoichiometry: 1.0
species: metaid_0000030
type: SpeciesReference

254997
stoichiometry: 1.0
species: metaid_0000032
type: SpeciesReference

metaid_0000022
constant: true
units: metaid_0000077
value: 0.001
type: Parameter

metaid_0000005
constant: true
units: metaid_0000077
value: 4.33E-4
type: Parameter

254681
exponent: 1.0
scale: 0
multipler: 1.0
kind: MOLE
type: SBMLUnit

255543
stoichiometry: 1.0
species: metaid_0000026
type: SpeciesReference

metaid_0000019
constant: true
units: metaid_0000072
value: 0.08
type: Parameter

metaid_0000043
is version of: GO:0003700
is: SBO:0000291
constant: false
boundary condition: false
has only substance units: true
initial concentration: NaN
initial amount: 0.0
in compartment: metaid_0000024
type: Species

255349
stoichiometry: 1.0
species: metaid_0000035
type: SpeciesReference

metaid_0000032
boundary condition: false
constant: false
is encoded by: ENSG00000141510
encodes: P04637
in compartment: metaid_0000024
initial amount: 0.0
initial concentration: NaN
type: Species
is: SBO:0000252
has only substance units: true

254766
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND
type: SBMLUnit

255675
stoichiometry: 1.0
species: metaid_0000036
type: SpeciesReference

metaid_0000063
kinetic law: 255555
product: 255543
reactant: 255531
is version of: GO:0006470
fast: false
reversible: false
type: Reaction

metaid_0000010
constant: true
units: metaid_0000077
value: 1.0E-4
type: Parameter

254985
stoichiometry: 1.0
species: metaid_0000032
type: SpeciesReference

254706
exponent: -1.0
scale: 0
multipler: 10.0
kind: GRAY
type: SBMLUnit

254839
stoichiometry: 1.0
species: metaid_0000036
type: SpeciesReference

255179
stoichiometry: 1.0
species: metaid_0000039
type: SpeciesReference

255215
stoichiometry: 1.0
species: metaid_0000025
type: SpeciesReference

metaid_0000052
reversible: false
reactant: 254985
kinetic law: 255033
fast: false
is version of: GO:0003700
product: 255021
product: 254997
product: 255009
type: Reaction

255747
persistant: true
initial value: true
type: Trigger

metaid_0000004
constant: true
units: metaid_0000077
value: 4.95E-4
type: Parameter

255263
stoichiometry: 1.0
species: metaid_0000025
type: SpeciesReference

metaid_0000033
initial concentration: NaN
constant: false
has only substance units: true
encodes: Q00987
initial amount: 0.0
boundary condition: false
type: Species
is: SBO:0000252
in compartment: metaid_0000024
is encoded by: ENSG00000135679

254863
stoichiometry: 1.0
species: metaid_0000028
type: SpeciesReference

metaid_0000018
constant: true
units: metaid_0000077
value: 0.5
type: Parameter

metaid_0000042
is version of: GO:0006402
is: SBO:0000291
constant: false
boundary condition: false
has only substance units: true
initial concentration: NaN
initial amount: 0.0
in compartment: metaid_0000024
type: Species

metaid_0000023
constant: true
units: metaid_0000077
value: 1.0E-4
type: Parameter

254900
stoichiometry: 1.0
species: metaid_0000041
type: SpeciesReference

255494
stoichiometry: 1.0
species: metaid_0000032
type: SpeciesReference

metaid_0000048
kinetic law: 254815
product: 254803
reactant: 254790
is version of: GO:0003700
fast: false
reversible: false
type: Reaction

255118
stoichiometry: 1.0
species: metaid_0000040
type: SpeciesReference

254803
stoichiometry: 1.0
species: metaid_0000029
type: SpeciesReference

255057
stoichiometry: 1.0
species: metaid_0000036
type: SpeciesReference

metaid_0000060
kinetic law: 255397
product: 255385
reactant: 255373
is version of: GO:0006281
fast: false
reversible: false
type: Reaction

metaid_0000074
unit: 254718
name: dGy
type: SBMLUnitsDef

metaid_0000028
in compartment: metaid_0000024
type: Species
has only substance units: true
constant: false
is: SBO:0000250
boundary condition: false
is version of: CHEBI:33699
initial concentration: NaN
is version of: C00046
initial amount: 10.0

255531
stoichiometry: 1.0
species: metaid_0000032
type: SpeciesReference

metaid_0000007
constant: true
units: metaid_0000077
value: 8.25E-4
type: Parameter

metaid_0000020
constant: true
units: metaid_0000077
value: 2.0E-5
type: Parameter

metaid_0000034
constant: false
units: metaid_0000074
value: 0.0
type: Parameter

metaid_0000055
product: 255167
kinetic law: 255191
type: Reaction
is version of: GO:0006412
product: 255179
reactant: 255142
reversible: false
product: 255154
fast: false

metaid_0000069
event assignment: 255783
trigger: 255771
use values from trigger time: true
type: Event

metaid_0000041
is version of: GO:0006412
is: SBO:0000291
constant: false
boundary condition: false
has only substance units: true
initial concentration: NaN
initial amount: 0.0
in compartment: metaid_0000024
type: Species

metaid_0000017
constant: true
units: metaid_0000076
value: 2.0
type: Parameter

254693
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND
type: SBMLUnit

metaid_0000061
reactant: 255409
type: Reaction
reversible: false
reactant: 255421
is version of: GO:0006468
fast: false
product: 255446
product: 255434
kinetic law: 255458

metaid_0000049
kinetic law: 254851
product: 254839
reactant: 254827
is version of: GO:0006402
fast: false
reversible: false
type: Reaction

255663
stoichiometry: 1.0
species: metaid_0000033
type: SpeciesReference

254718
exponent: 1.0
scale: 0
multipler: 10.0
kind: GRAY
type: SBMLUnit

254754
exponent: -1.0
scale: 0
multipler: 1.0
kind: MOLE
type: SBMLUnit

255142
stoichiometry: 1.0
species: metaid_0000029
type: SpeciesReference

metaid_0000075
unit: 254742
unit: 254730
name: molpsec
type: SBMLUnitsDef

metaid_0000029
initial amount: 10.0
is version of: C00046
type: Species
has only substance units: true
is: SBO:0000250
boundary condition: false
is version of: CHEBI:33699
initial concentration: NaN
constant: false
in compartment: metaid_0000024

254875
stoichiometry: 1.0
species: metaid_0000028
type: SpeciesReference

metaid_0000054
kinetic law: 255130
product: 255118
product: 255105
reactant: 255093
is version of: GO:0043161
fast: false
reversible: false
type: Reaction

metaid_0000006
constant: true
units: metaid_0000077
value: 0.006
type: Parameter

metaid_0000021
constant: true
units: dimensionless
value: 1.0
type: Parameter

255275
stoichiometry: 1.0
species: metaid_0000027
type: SpeciesReference

metaid_0000035
is: SBO:0000405
initial amount: 0.0
boundary condition: false
initial concentration: NaN
is version of: GO:0006974
constant: false
is version of: CHEBI:16991
has only substance units: true
in compartment: metaid_0000024
type: Species

255093
stoichiometry: 1.0
species: metaid_0000025
type: SpeciesReference

metaid_0000016
constant: true
units: metaid_0000077
value: 0.5
type: Parameter

metaid_0000068
event assignment: 255759
trigger: 255747
is version of: GO:0006950
use values from trigger time: true
type: Event

255203
stoichiometry: 1.0
species: metaid_0000027
type: SpeciesReference

254948
stoichiometry: 1.0
species: metaid_0000028
type: SpeciesReference

metaid_0000040
is version of: GO:0043161
is: SBO:0000291
constant: false
boundary condition: false
has only substance units: true
initial concentration: NaN
initial amount: 0.0
in compartment: metaid_0000024
type: Species

255251
stoichiometry: 1.0
species: metaid_0000026
type: SpeciesReference

metaid_0000056
kinetic law: 255239
product: 255227
product: 255215
reactant: 255203
is version of: GO:0043161
fast: false
reversible: false
type: Reaction

255434
stoichiometry: 1.0
species: metaid_0000035
type: SpeciesReference

metaid_0000076
unit: 254766
unit: 254754
name: pmolpsec
type: SBMLUnitsDef

metaid_0000015
constant: true
units: metaid_0000076
value: 5.0E-4
type: Parameter

254936
stoichiometry: 1.0
species: metaid_0000026
type: SpeciesReference

metaid_0000009
constant: true
units: metaid_0000077
value: 1.155E-5
type: Parameter

255567
stoichiometry: 1.0
species: metaid_0000025
type: SpeciesReference

metaid_0000066
kinetic law: 255699
product: 255687
product: 255675
reactant: 255663
is version of: GO:0043161
fast: false
reversible: false
type: Reaction

255069
stoichiometry: 1.0
species: metaid_0000042
type: SpeciesReference

metaid_0000026
constant: false
has only substance units: true
initial amount: 5.0
in compartment: metaid_0000024
boundary condition: false
is: SBO:0000252
type: Species
initial concentration: NaN
is: P04637
is encoded by: ENSG00000141510

metaid_0000036
is: SBO:0000291
constant: true
boundary condition: true
has only substance units: true
initial concentration: NaN
initial amount: 1.0
in compartment: metaid_0000024
type: Species

metaid_0000014
constant: true
units: metaid_0000077
value: 5.0E-4
type: Parameter

metaid_0000067
kinetic law: 255735
product: 255723
reactant: 255711
is version of: GO:0006470
fast: false
reversible: false
type: Reaction

metaid_0000077
unit: 254778
name: psec
type: SBMLUnitsDef

metaid_0000057
kinetic law: 255287
product: 255275
reactant: 255263
reactant: 255251
is version of: GO:0002039
fast: false
reversible: false
type: Reaction

255723
stoichiometry: 1.0
species: metaid_0000031
type: SpeciesReference

255324
stoichiometry: 1.0
species: metaid_0000025
type: SpeciesReference

254887
stoichiometry: 1.0
species: metaid_0000025
type: SpeciesReference

255385
stoichiometry: 1.0
species: metaid_0000036
type: SpeciesReference

255506
stoichiometry: 1.0
species: metaid_0000030
type: SpeciesReference

255579
stoichiometry: 1.0
species: metaid_0000030
type: SpeciesReference

254961
stoichiometry: 1.0
species: metaid_0000043
type: SpeciesReference

metaid_0000027
has part: Q00987
in compartment: metaid_0000024
type: Species
initial amount: 95.0
is: SBO:0000297
initial concentration: NaN
constant: false
has only substance units: true
has part: P04637
boundary condition: false

ORG:
  orgname: EMBL-EBI
n:
  given: Vijayalakshmi
  family: Chelliah

255639
stoichiometry: 1.0
species: metaid_0000025
type: SpeciesReference

255154
stoichiometry: 1.0
species: metaid_0000026
type: SpeciesReference

255591
stoichiometry: 1.0
species: metaid_0000033
type: SpeciesReference

254742
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND
type: SBMLUnit

metaid_0000037
is: SBO:0000291
constant: true
boundary condition: true
has only substance units: true
initial concentration: NaN
initial amount: 1.0
in compartment: metaid_0000024
type: Species

255771
persistant: true
initial value: true
type: Trigger

metaid_0000008
constant: true
units: metaid_0000076
value: 0.001155
type: Parameter

255009
stoichiometry: 1.0
species: metaid_0000028
type: SpeciesReference

255021
stoichiometry: 1.0
species: metaid_0000043
type: SpeciesReference

255446
stoichiometry: 1.0
species: metaid_0000030
type: SpeciesReference

metaid_0000013
constant: true
units: metaid_0000077
value: 4.0E-4
type: Parameter

metaid_0000031
is: Q13315
is: SBO:0000252
constant: false
boundary condition: false
has only substance units: true
initial concentration: NaN
initial amount: 200.0
in compartment: metaid_0000024
type: Species

metaid_0000044
is: SBO:0000252
constant: false
boundary condition: false
has only substance units: true
initial concentration: NaN
initial amount: 0.0
in compartment: metaid_0000024
type: Species

metaid_0000058
kinetic law: 255337
product: 255324
product: 255312
reactant: 255299
is version of: GO:0043624
fast: false
reversible: false
type: Reaction

metaid_0000064
reversible: false
product: 255591
fast: false
reactant: 255567
kinetic law: 255615
reactant: 255579
is version of: GO:0006468
product: 255603
type: Reaction

255227
stoichiometry: 1.0
species: metaid_0000038
type: SpeciesReference

255409
stoichiometry: 1.0
species: metaid_0000035
type: SpeciesReference

254924
stoichiometry: 1.0
species: metaid_0000026
type: SpeciesReference

metaid_0000024
is: GO:0005623
constant: true
size: 1.0
spatial dimensions: 3.0
type: Compartment

BIOMD0000000188
units def: metaid_0000077
species: metaid_0000032
parameter: metaid_0000009
species: metaid_0000035
species: metaid_0000026
event: metaid_0000069
species: metaid_0000042
reaction: metaid_0000052
rule: metaid_0000046
occurs in: http://identifiers.org/taxonomy/9606
species: metaid_0000038
event: metaid_0000068
species: metaid_0000044
parameter: metaid_0000019
parameter: metaid_0000020
parameter: metaid_0000012
parameter: metaid_0000021
is version of: REACT 309
reaction: metaid_0000059
reaction: metaid_0000067
is version of: GO:0043516
parameter: metaid_0000006
species: metaid_0000031
parameter: metaid_0000007
reaction: metaid_0000051
reaction: metaid_0000062
reaction: metaid_0000063
compartment: metaid_0000024
is part of: REACT 85
units def: metaid_0000076
species: metaid_0000033
time units: metaid_0000054
species: metaid_0000040
species: metaid_0000028
curated: true
rule: metaid_0000047
notes: This model is automatically converted from the Model BIOMD0000000188 by using libsbml . According to the terms of use , this generated model is not related with Model BIOMD0000000188 any more.
species: metaid_0000036
species: metaid_0000027
type: SBMLModel
species: metaid_0000043
species: metaid_0000039
reaction: metaid_0000066
reaction: metaid_0000055
volume units: metaid_0000004
units def: metaid_0000075
parameter: metaid_0000017
parameter: metaid_0000018
species: metaid_0000045
reaction: metaid_0000057
reaction: metaid_0000058
units def: metaid_0000072
parameter: metaid_0000004
parameter: metaid_0000005
reaction: metaid_0000060
reaction: metaid_0000050
reaction: metaid_0000061
area units: metaid_0000005
substance units: metaid_0000053
parameter: metaid_0000015
is described by: http://identifiers.org/pubmed/18706112
parameter: metaid_0000011
is: MODEL5836973167
is part of: hsa04115
parameter: metaid_0000023
species: metaid_0000025
species: metaid_0000041
species: metaid_0000029
species: metaid_0000037
parameter: metaid_0000008
reaction: metaid_0000064
reaction: metaid_0000053
reaction: metaid_0000054
reaction: metaid_0000048
reaction: metaid_0000065
reaction: metaid_0000049
parameter: metaid_0000016
reaction: metaid_0000056
units def: metaid_0000074
name: Proctor2008_p53_Mdm2_ATM

metaid_0000038
is version of: GO:0043161
is: SBO:0000291
constant: false
boundary condition: false
has only substance units: true
initial concentration: NaN
initial amount: 0.0
in compartment: metaid_0000024
type: Species

metaid_0000051
is version of: GO:0003700
reversible: false
product: 254948
reactant: 254924
type: Reaction
product: 254961
fast: false
product: 254936
kinetic law: 254973

254778
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND
type: SBMLUnit

255167
stoichiometry: 1.0
species: metaid_0000029
type: SpeciesReference

255312
stoichiometry: 1.0
species: metaid_0000026
type: SpeciesReference

metaid_0000059
kinetic law: 255361
product: 255349
is version of: GO:0006974
fast: false
reversible: false
type: Reaction

255373
stoichiometry: 1.0
species: metaid_0000035
type: SpeciesReference

metaid_0000030
is: Q13315
is: SBO:0000252
constant: false
boundary condition: false
has only substance units: true
initial concentration: NaN
initial amount: 0.0
in compartment: metaid_0000024
type: Species

255299
stoichiometry: 1.0
species: metaid_0000027
type: SpeciesReference

metaid_0000012
constant: true
units: metaid_0000076
value: 1.0E-4
type: Parameter

255421
stoichiometry: 1.0
species: metaid_0000031
type: SpeciesReference

metaid_0000045
is: SBO:0000252
constant: false
boundary condition: false
has only substance units: true
initial concentration: NaN
initial amount: 0.0
in compartment: metaid_0000024
type: Species

metaid_0000065
kinetic law: 255651
product: 255639
reactant: 255627
is version of: GO:0006470
fast: false
reversible: false
type: Reaction

254790
stoichiometry: 1.0
species: metaid_0000037
type: SpeciesReference

255711
stoichiometry: 1.0
species: metaid_0000030
type: SpeciesReference

metaid_0000025
has only substance units: true
in compartment: metaid_0000024
is encoded by: ENSG00000135679
is: Q00987
boundary condition: false
constant: false
initial amount: 5.0
initial concentration: NaN
is: SBO:0000252
type: Species

255470
stoichiometry: 1.0
species: metaid_0000026
type: SpeciesReference

254827
stoichiometry: 1.0
species: metaid_0000029
type: SpeciesReference

metaid_0000050
product: 254887
reactant: 254863
fast: false
kinetic law: 254912
is version of: GO:0006412
product: 254875
type: Reaction
reversible: false
product: 254900

255687
stoichiometry: 1.0
species: metaid_0000040
type: SpeciesReference

metaid_0000039
is version of: GO:0006412
is: SBO:0000291
constant: false
boundary condition: false
has only substance units: true
initial concentration: NaN
initial amount: 0.0
in compartment: metaid_0000024
type: Species

255105
stoichiometry: 1.0
species: metaid_0000036
type: SpeciesReference

255627
stoichiometry: 1.0
species: metaid_0000033
type: SpeciesReference

254730
exponent: 1.0
scale: 0
multipler: 1.0
kind: MOLE
type: SBMLUnit

given: Douglas A
family: Gray

orgname: Ottawa Health Research Institute, Ottawa.

ORG:
  orgname: University of Newcastle
n:
  given: Carole
  family: Proctor

W3 CDTF: Tue Feb 02 13:34:40 GMT 2010

W3 CDTF: Mon Sep 01 12:45:30 BST 2008