metaid_0000015
kinetic law: 236381
product: 236369
is version of: GO:0007204
is version of: GO:0006816
fast: false
reversible: false
name: Ca flux into the cell
type: Reaction

236369
stoichiometry: 1.0
species: metaid_0000005
type: SpeciesReference

metaid_0000005
type: Species
constant: false
boundary condition: false
is: CHEBI:29108
is: C00076
initial concentration: 1.0
name: Ca_Cyt
in compartment: metaid_0000018
initial amount: NaN
has only substance units: false

metaid_0000019
is version of: GO:0005783
constant: true
size: 1.0
spatial dimensions: 3.0
name: Endoplasmic Reticulum
type: Compartment

metaid_0000022
kinetic law: 236489
product: 236477
name: InsP3 channel
reversible: false
fast: false
reactant: 236465
is version of: GO:0005220
is version of: GO:0006816
type: Reaction
is version of: GO:0051482

236477
stoichiometry: 1.0
species: metaid_0000005
type: SpeciesReference

metaid_0000009
constant: true
value: 1.4
type: Parameter

236393
stoichiometry: 1.0
species: metaid_0000004
type: SpeciesReference

metaid_0000011
constant: true
value: 1.0
type: Parameter

BIOMD0000000115
parameter: metaid_0000017
reaction: metaid_0000021
occurs in: http://identifiers.org/taxonomy/10114
name: Somogyi1990_CaOscillations_SingleCaSpike
is version of: GO:0009755
parameter: metaid_0000007
parameter: metaid_0000010
reaction: metaid_0000022
parameter: metaid_0000008
is version of: GO:0051924
parameter: metaid_0000013
compartment: metaid_0000020
species: metaid_0000004
rule: metaid_0000014
type: SBMLModel
time units: metaid_0000048
substance units: metaid_0000031
compartment: metaid_0000019
parameter: metaid_0000006
compartment: metaid_0000018
notes: Another model from Hormone induced Calcium Oscillations in Liver Cells Can Be Explained by a Simply One Pool Model. Anatomy of a single Ca2+ spike. Figure4A has been simulated by COPASI4.0.20(development). However, the simulated figure is slightly different from the paper, single spike of Ca2+ is around "6" time arbitrary units instead "9" time arbitrary units displayed in the paper. To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information. In summary, you are entitled to use this encoded model in absolutely any manner you deem suitable, verbatim, or with modification, alone or embedded it in a larger context, redistribute it, commercially or not, in a restricted way or not. To cite BioModels Database, please use: Li C, Donizelli M, Rodriguez N, Dharuri H, Endler L, Chelliah V, Li L, He E, Henry A, Stefan MI, Snoep JL, Hucka M, Le Novère N, Laibe C (2010) BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models. BMC Syst Biol., 4:92.
is: MODEL8910960676
curated: true
reaction: metaid_0000015
modified:
  W3 CDTF: Thu Jul 05 17:31:13 BST 2012
is described by: http://identifiers.org/pubmed/1904060
area units: metaid_0000005
parameter: metaid_0000011
reaction: metaid_0000023
reaction: metaid_0000016
creator:
  ORG:
    orgname: BNMC
  n:
    given: Enuo
    family: He
length unit: length
parameter: metaid_0000009
volume units: metaid_0000084
species: metaid_0000005
created:
  W3 CDTF: Thu May 10 09:46:04 BST 2007

metaid_0000006
constant: true
value: 0.01
type: Parameter

metaid_0000016
is version of: GO:0006816
reversible: false
kinetic law: 236417
fast: false
is version of: GO:0032471
is version of: GO:0007204
name: Ca translocation from ER to Cytosol
reactant: 236393
product: 236405
type: Reaction

metaid_0000021
type: Reaction
reversible: false
fast: false
is version of: GO:0006816
name: Ca transport from Cytosol to ER
product: 236441
is version of: GO:0051481
is version of: GO:0032470
reactant: 236429
kinetic law: 236453

236429
stoichiometry: 1.0
species: metaid_0000005
type: SpeciesReference

metaid_0000010
constant: true
value: 2.0
type: Parameter

metaid_0000014
notes: InsP3 induced calcium release channel.
is version of: GO:0051924

236441
stoichiometry: 1.0
species: metaid_0000004
type: SpeciesReference

236501
stoichiometry: 1.0
species: metaid_0000005
type: SpeciesReference

236405
stoichiometry: 1.0
species: metaid_0000005
type: SpeciesReference

236465
stoichiometry: 1.0
species: metaid_0000004
type: SpeciesReference

metaid_0000020
is version of: GO:0005576
constant: true
size: 1.0
spatial dimensions: 3.0
type: Compartment

metaid_0000017
constant: true
value: 1.0
type: Parameter

metaid_0000007
constant: true
value: 10.0
type: Parameter

metaid_0000013
constant: false
value: NaN
type: Parameter

metaid_0000023
kinetic law: 236514
reactant: 236501
is version of: GO:0005388
is version of: GO:0006816
is version of: GO:0051481
fast: false
reversible: false
name: Ca pumped ouside the cell
type: Reaction

metaid_0000004
has only substance units: false
in compartment: metaid_0000019
name: Ca_ER
type: Species
constant: false
is: C00076
initial concentration: 1.0
initial amount: NaN
is: CHEBI:29108
boundary condition: false

metaid_0000018
is version of: GO:0005829
constant: true
size: 1.0
spatial dimensions: 3.0
type: Compartment

metaid_0000008
constant: true
value: 4.0
type: Parameter