151285
kinetic law: 984472
product: 984459
is: GO:0006412
is: GO:0009642
fast: false
reversible: false
name: cPn synthesis
type: Reaction

151005
kinetic law: 984014
modifier: 984002
product: 983990
is: GO:0006351
fast: false
reversible: false
name: cXm transcription
type: Reaction

metaid_0000147
constant: true
units: metaid_0000163
value: 22.838
name: r12
type: Parameter

150865
kinetic law: 983746
reactant: 983734
is: GO:0044257
fast: false
reversible: false
name: cLn degradation
type: Reaction

984536
stoichiometry: 1.0
species: 114139
type: SpeciesReference

150825
kinetic law: 983662
product: 983650
reactant: 983638
is: GO:0000060
fast: false
reversible: false
name: cLc transport into nucleus
type: Reaction

metaid_0000074
constant: true
units: metaid_0000165
value: 2.3023
name: n1
type: Parameter

984343
stoichiometry: 1.0
species: 114419
type: SpeciesReference

metaid_0000172
is: GO:0005634
constant: true
size: 1.0
spatial dimensions: 3.0
name: nucleus
type: Compartment

151245
kinetic law: 984420
reactant: 984407
is: GO:0044257
fast: false
reversible: false
name: cYc degradation
type: Reaction

983831
stoichiometry: 1.0
species: 114259
type: SpeciesReference

metaid_0000088
constant: true
units: metaid_0000165
value: 8.5185
name: m4
type: Parameter

metaid_0000146
constant: true
units: metaid_0000163
value: 34.6266
name: r11
type: Parameter

984087
stoichiometry: 1.0
species: 114319
type: SpeciesReference

983444
exponent: 1.0
scale: -9
multipler: 1.0
kind: MOLE
type: SBMLUnit

metaid_0000173
type: Reaction
kinetic law: 984789
modifier: 984777
has part: GO:0009642
fast: false
reversible: false
product: 984753
is: GO:0006351
modifier: 984765
name: cP9m transcription

metaid_0000087
constant: true
units: metaid_0000164
value: 11.5922
name: g3
type: Parameter

metaid_0000073
constant: true
units: metaid_0000163
value: 7.9798
name: q1
type: Parameter

984331
stoichiometry: 1.0
species: 114379
type: SpeciesReference

984382
stoichiometry: 1.0
species: 114379
type: SpeciesReference

114039
is: GO:0005737
constant: true
size: 1.0
spatial dimensions: 3.0
name: cytoplasm
type: Compartment

983480
stoichiometry: 1.0
species: 114079
type: SpeciesReference

983516
stoichiometry: 1.0
species: 114079
type: SpeciesReference

114379
constant: false
boundary condition: false
has only substance units: false
initial concentration: 49.2611
initial amount: NaN
in compartment: 114039
name: cYc
type: Species

984873
stoichiometry: 1.0
species: 114219
type: SpeciesReference

151565
kinetic law: 984969
reactant: 984957
is: GO:0044257
fast: false
reversible: false
name: cP9n degradation
type: Reaction

114419
is: GO:0005667
constant: false
boundary condition: false
has only substance units: false
initial concentration: 17.4355
initial amount: NaN
in compartment: metaid_0000172
name: cYn
type: Species

metaid_0000160
constant: true
units: dimensionless
value: 1.4943
name: e
type: Parameter

114079
is: C00046
type: Species
initial concentration: 0.1114
has only substance units: false
in compartment: metaid_0000172
constant: false
is: CHEBI:33699
initial amount: NaN
boundary condition: false
name: cLm

114359
is: GO:0005667
constant: false
boundary condition: false
has only substance units: false
initial concentration: 14.7289
initial amount: NaN
in compartment: metaid_0000172
name: cXn
type: Species

984184
stoichiometry: 1.0
species: 114359
type: SpeciesReference

metaid_0000159
constant: true
units: dimensionless
value: 1.0164
name: d
type: Parameter

114319
constant: false
boundary condition: false
has only substance units: false
initial concentration: 2.4188
initial amount: NaN
in compartment: 114039
name: cXc
type: Species

metaid_0000076
constant: true
units: metaid_0000165
value: 8.0568
name: m1
type: Parameter

metaid_0000149
constant: true
units: metaid_0000164
value: 16.2407
name: k18
type: Parameter

metaid_0000119
constant: true
units: metaid_0000163
value: 25.8963
name: r8
type: Parameter

151306
kinetic law: 984524
reactant: 984511
is: GO:0009642
is: GO:0045732
fast: false
reversible: false
name: Light dependent cPn degradation
type: Reaction

metaid_0000086
constant: true
units: metaid_0000164
value: 16.7487
name: g2
type: Parameter

metaid_0000170
constant: true
units: dimensionless
value: 3.3953
name: k
type: Parameter

984270
stoichiometry: 1.0
species: 114399
type: SpeciesReference

114059
is: O81713
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0731
initial amount: NaN
in compartment: 114039
name: cLc
type: Species

983432
exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

114399
boundary condition: false
initial amount: NaN
is: C00046
name: cYm
initial concentration: 0.2992
is: CHEBI:33699
constant: false
has only substance units: false
type: Species
in compartment: metaid_0000172

983939
stoichiometry: 1.0
species: 114259
type: SpeciesReference

metaid_0000158
constant: true
units: dimensionless
value: 1.6808
name: c
type: Parameter

151205
kinetic law: 984356
product: 984343
reactant: 984331
is: GO:0000060
fast: false
reversible: false
name: cYc transport to nucleus
type: Reaction

150965
kinetic law: 983953
reactant: 983939
is: GO:0044257
fast: false
reversible: false
name: cTc degradation
type: Reaction

metaid_0000161
unit: 983384
name: nanomoles
type: SBMLUnitsDef

metaid_0000075
constant: true
units: metaid_0000164
value: 16.3389
name: g1
type: Parameter

metaid_0000085
constant: true
units: metaid_0000165
value: 7.5433
name: n2
type: Parameter

151305
kinetic law: 984498
reactant: 984485
is: GO:0044257
fast: false
reversible: false
name: cPn degradation
type: Reaction

metaid_0000148
constant: true
units: metaid_0000165
value: 3.4152
name: m20
type: Parameter

metaid_0000118
constant: true
units: metaid_0000163
value: 9.1917
name: r7
type: Parameter

metaid_0000171
constant: false
units: metaid_0000162
value: 24.0
type: Parameter

BIOMD0000000096
parameter: metaid_0000131
reaction: 150885
parameter: metaid_0000113
parameter: metaid_0000122
parameter: metaid_0000081
substance units: metaid_0000161
units def: metaid_0000162
parameter: metaid_0000141
is derived from: BIOMD0000000055
reaction: 150785
reaction: 151326
species: 114279
reaction: 150825
volume units: metaid_0000004
units def: metaid_0000165
species: 114299
parameter: metaid_0000156
parameter: metaid_0000095
reaction: 151085
parameter: metaid_0000147
parameter: metaid_0000119
parameter: metaid_0000088
is: GO:0007623
parameter: metaid_0000144
parameter: metaid_0000079
parameter: metaid_0000138
reaction: 151305
parameter: metaid_0000076
parameter: metaid_0000155
parameter: metaid_0000094
name: Zeilinger2006_PRR7-PRR9light-Y
reaction: 151225
parameter: metaid_0000117
parameter: metaid_0000126
reaction: 151365
reaction: 151245
parameter: metaid_0000078
reaction: 151005
parameter: metaid_0000137
parameter: metaid_0000121
parameter: metaid_0000168
parameter: metaid_0000080
parameter: metaid_0000103
reaction: 151565
event: metaid_0000175
species: 114179
parameter: metaid_0000118
reaction: 151025
parameter: metaid_0000123
parameter: metaid_0000082
parameter: metaid_0000154
event: metaid_0000174
parameter: metaid_0000108
reaction: 151505
parameter: metaid_0000160
reaction: 151465
parameter: metaid_0000142
parameter: metaid_0000077
parameter: metaid_0000171
reaction: 150965
reaction: 151265
parameter: metaid_0000153
species: 114059
type: SBMLModel
occurs in: http://identifiers.org/taxonomy/3701
parameter: metaid_0000085
species: 114419
parameter: metaid_0000145
is: MODEL4025634026
reaction: 151306
reaction: 151045
length unit: length
parameter: metaid_0000130
parameter: metaid_0000127
species: 114219
parameter: metaid_0000092
parameter: metaid_0000112
species: 114199
species: 114359
notes: The model reproduces the time profile of cYm and cTm under light-dark cycles as depicted in Fig 4 and Fig 5 respectively. 12 hour light-dark cycles are accomplished using a simple algorithm in the event section. The model was successfully tested using MathSBML. To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information. In summary, you are entitled to use this encoded model in absolutely any manner you deem suitable, verbatim, or with modification, alone or embedded it in a larger context, redistribute it, commercially or not, in a restricted way or not. To cite BioModels Database, please use: Li C, Donizelli M, Rodriguez N, Dharuri H, Endler L, Chelliah V, Li L, He E, Henry A, Stefan MI, Snoep JL, Hucka M, Le Novère N, Laibe C (2010) BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models. BMC Syst Biol., 4:92.

metaid_0000130
constant: true
units: metaid_0000165
value: 11.3117
name: n6
type: Parameter

metaid_0000107
constant: true
units: metaid_0000165
value: 9.3024
name: m5
type: Parameter

metaid_0000120
constant: true
units: metaid_0000165
value: 6.8544
name: m13
type: Parameter

151145
kinetic law: 984257
type: Reaction
name: cYm transcription
fast: false
modifier: 984245
product: 984208
modifier: 984233
is: GO:0006351
reversible: false
is: GO:0009642
modifier: 984220

114199
type: Species
name: cP9m
initial amount: NaN
has only substance units: false
is: C00046
constant: false
is: CHEBI:33699
initial concentration: 0.002
in compartment: metaid_0000172
boundary condition: false

984861
stoichiometry: 1.0
species: 114179
type: SpeciesReference

150905
kinetic law: 983819
reactant: 983807
is: GO:0006402
fast: false
reversible: false
name: cTm degradation
type: Reaction

984909
stoichiometry: 1.0
species: 114179
type: SpeciesReference

984407
stoichiometry: 1.0
species: 114379
type: SpeciesReference

114299
is: Q9LKL2
constant: false
boundary condition: false
has only substance units: false
initial concentration: 4.5333
initial amount: NaN
in compartment: metaid_0000172
name: cTn
type: Species

151165
kinetic law: 984282
reactant: 984270
is: GO:0006402
fast: false
reversible: false
name: cYm degradation
type: Reaction

metaid_0000084
constant: true
units: metaid_0000164
value: 29.0823
name: k3
type: Parameter

metaid_0000091
constant: true
units: metaid_0000163
value: 8.583
name: p3
type: Parameter

984459
stoichiometry: 1.0
species: 114239
type: SpeciesReference

984705
stoichiometry: 1.0
species: 114119
type: SpeciesReference

983990
stoichiometry: 1.0
species: 114339
type: SpeciesReference

metaid_0000131
constant: true
units: metaid_0000164
value: 14.5219
name: g9
type: Parameter

984433
stoichiometry: 1.0
species: 114419
type: SpeciesReference

metaid_0000106
constant: true
units: metaid_0000163
value: 33.6178
name: r4
type: Parameter

151125
kinetic law: 984196
reactant: 984184
is: GO:0044257
fast: false
reversible: false
name: cXn degradation
type: Reaction

151065
kinetic law: 984112
product: 984100
reactant: 984087
is: GO:0000060
fast: false
reversible: false
name: cXc transport into nucleus
type: Reaction

984572
stoichiometry: 1.0
species: 114139
type: SpeciesReference

metaid_0000121
constant: true
units: metaid_0000164
value: 48.5862
name: k11
type: Parameter

150906
kinetic law: 983855
modifier: 983843
product: 983831
is: GO:0006412
fast: false
reversible: false
name: cTc synthesis
type: Reaction

151465
kinetic law: 984813
reactant: 984801
is: GO:0006402
fast: false
reversible: false
name: cP79m degradation
type: Reaction

metaid_0000083
constant: true
units: metaid_0000165
value: 12.7853
name: m3
type: Parameter

151105
kinetic law: 984172
reactant: 984160
is: GO:0044257
fast: false
reversible: false
name: cXc degradation
type: Reaction

metaid_0000092
constant: true
units: metaid_0000163
value: 27.818
name: r5
type: Parameter

114099
is: O81713
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.2366
initial amount: NaN
in compartment: metaid_0000172
name: cLn
type: Species

983468
exponent: -1.0
scale: 0
multipler: 3600.0
kind: SECOND
type: SBMLUnit

984933
stoichiometry: 1.0
species: 114179
type: SpeciesReference

114219
is: Q8L500
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.1162
initial amount: NaN
in compartment: metaid_0000172
name: cP9n
type: Species

114159
is: Q93WK5
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.5103
initial amount: NaN
in compartment: metaid_0000172
name: cP7n
type: Species

983758
stoichiometry: 1.0
species: 114279
type: SpeciesReference

metaid_0000109
constant: true
units: metaid_0000164
value: 16.9133
name: k5
type: Parameter

metaid_0000132
constant: true
units: metaid_0000165
value: 9.531
name: m16
type: Parameter

984160
stoichiometry: 1.0
species: 114319
type: SpeciesReference

983867
stoichiometry: 1.0
species: 114259
type: SpeciesReference

984208
stoichiometry: 1.0
species: 114399
type: SpeciesReference

984294
stoichiometry: 1.0
species: 114379
type: SpeciesReference

151485
kinetic law: 984849
modifier: 984837
product: 984825
is: GO:0006412
fast: false
reversible: false
name: cP9c synthesis
type: Reaction

983600
stoichiometry: 1.0
species: 114059
type: SpeciesReference

983408
exponent: -1.0
scale: 0
multipler: 3600.0
kind: SECOND
type: SBMLUnit

metaid_0000082
constant: true
units: metaid_0000164
value: 32.7881
name: k2
type: Parameter

metaid_0000133
constant: true
units: metaid_0000164
value: 50.9418
name: k14
type: Parameter

metaid_0000108
constant: true
units: metaid_0000165
value: 10.899
name: m6
type: Parameter

114259
initial concentration: 5.2235
has only substance units: false
name: cTc
in compartment: 114039
is: IPR010402
constant: false
boundary condition: false
type: Species
initial amount: NaN
is: Q9LKL2

151425
kinetic law: 984741
reactant: 984729
is: GO:0044257
fast: false
reversible: false
name: cP7n degradation
type: Reaction

983915
stoichiometry: 1.0
species: 114259
type: SpeciesReference

151405
kinetic law: 984717
reactant: 984705
is: GO:0044257
fast: false
reversible: false
name: cP7c degradation
type: Reaction

983456
exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

984511
stoichiometry: 1.0
species: 114239
type: SpeciesReference

metaid_0000090
constant: true
units: metaid_0000163
value: 1.0494
name: p2
type: Parameter

984596
stoichiometry: 1.0
species: 114119
type: SpeciesReference

150805
kinetic law: 983626
modifier: 983613
product: 983600
is: GO:0006412
fast: false
reversible: false
name: cLc synthesis
type: Reaction

114119
is: Q93WK5
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0266
initial amount: NaN
in compartment: 114039
name: cP7c
type: Species

metaid_0000081
constant: true
units: metaid_0000165
value: 10.4609
name: m2
type: Parameter

983576
stoichiometry: 1.0
species: 114079
type: SpeciesReference

ORG:
  orgname: California Institute of Technology
n:
  given: Harish
  family: Dharuri

metaid_0000095
constant: true
units: metaid_0000164
value: 13.4324
name: k8
type: Parameter

metaid_0000080
constant: true
units: metaid_0000163
value: 9.1138
name: r2
type: Parameter

metaid_0000114
constant: true
units: metaid_0000164
value: 11.3625
name: g4
type: Parameter

983807
stoichiometry: 1.0
species: 114279
type: SpeciesReference

metaid_0000167
constant: true
units: dimensionless
value: 2.2116
name: h
type: Parameter

151025
kinetic law: 984039
reactant: 984026
is: GO:0006402
fast: false
reversible: false
name: cXm degradation
type: Reaction

984485
stoichiometry: 1.0
species: 114239
type: SpeciesReference

150885
kinetic law: 983795
modifier: 983782
modifier: 983770
product: 983758
is: GO:0006351
fast: false
reversible: false
name: cTm transcription
type: Reaction

151225
kinetic law: 984394
product: 984382
reactant: 984369
is: GO:0065002
fast: false
reversible: false
name: cYn transport to cytoplasm
type: Reaction

984669
stoichiometry: 1.0
species: 114159
type: SpeciesReference

983650
stoichiometry: 1.0
species: 114099
type: SpeciesReference

metaid_0000124
constant: true
units: metaid_0000165
value: 0.5
name: p5
type: Parameter

metaid_0000104
constant: true
units: metaid_0000164
value: 16.1162
name: k10
type: Parameter

metaid_0000153
constant: true
units: metaid_0000164
value: 2.0738
name: n8
type: Parameter

984753
stoichiometry: 1.0
species: 114199
type: SpeciesReference

metaid_0000134
constant: true
units: metaid_0000163
value: 6.7738
name: p6
type: Parameter

150845
kinetic law: 983698
product: 983686
reactant: 983674
is: GO:0065002
fast: false
reversible: false
name: cLn transport into cytoplasm
type: Reaction

984681
stoichiometry: 1.0
species: 114119
type: SpeciesReference

984729
stoichiometry: 1.0
species: 114159
type: SpeciesReference

metaid_0000166
constant: true
units: dimensionless
value: 1.9491
name: f
type: Parameter

983710
stoichiometry: 1.0
species: 114059
type: SpeciesReference

984026
stoichiometry: 1.0
species: 114339
type: SpeciesReference

metaid_0000096
constant: true
units: metaid_0000165
value: 7.9066
name: m11
type: Parameter

151265
kinetic law: 984446
reactant: 984433
is: GO:0044257
fast: false
reversible: false
name: cYn degradation
type: Reaction

metaid_0000125
constant: true
units: metaid_0000164
value: 1.2
name: k13
type: Parameter

983638
stoichiometry: 1.0
species: 114059
type: SpeciesReference

983965
stoichiometry: 1.0
species: 114299
type: SpeciesReference

metaid_0000105
constant: true
units: metaid_0000163
value: 29.4222
name: r3
type: Parameter

metaid_0000152
constant: true
units: metaid_0000163
value: 7.4548
name: q4
type: Parameter

metaid_0000115
constant: true
units: metaid_0000165
value: 2.6345
name: m9
type: Parameter

metaid_0000135
constant: true
units: metaid_0000163
value: 31.0318
name: r9
type: Parameter

984981
persistant: true
initial value: true
type: Trigger

metaid_0000093
constant: true
units: metaid_0000163
value: 4.2863
name: r6
type: Parameter

150846
kinetic law: 983722
reactant: 983710
is: GO:0044257
fast: false
reversible: false
name: cLc degradation
type: Reaction

984100
stoichiometry: 1.0
species: 114359
type: SpeciesReference

983903
stoichiometry: 1.0
species: 114299
type: SpeciesReference

metaid_0000169
constant: true
units: dimensionless
value: 2.5579
name: j
type: Parameter

984051
stoichiometry: 1.0
species: 114319
type: SpeciesReference

metaid_0000102
constant: true
units: metaid_0000164
value: 7.8469
name: g6
type: Parameter

metaid_0000141
constant: true
units: metaid_0000165
value: 0.0833
name: n7
type: Parameter

984801
stoichiometry: 1.0
species: 114199
type: SpeciesReference

metaid_0000122
constant: true
units: metaid_0000165
value: 3.2581
name: m14
type: Parameter

150985
kinetic law: 983977
reactant: 983965
is: GO:0044257
fast: false
reversible: false
name: cTn degradation
type: Reaction

151505
kinetic law: 984885
product: 984873
reactant: 984861
is: GO:0000060
fast: false
reversible: false
name: cP9c transport to nucleus
type: Reaction

metaid_0000136
constant: true
units: metaid_0000163
value: 0.4557
name: r10
type: Parameter

151185
kinetic law: 984318
modifier: 984306
product: 984294
is: GO:0006412
fast: false
reversible: false
name: cYc transcription
type: Reaction

metaid_0000116
constant: true
units: metaid_0000164
value: 8.6873
name: k7
type: Parameter

metaid_0000151
constant: true
units: metaid_0000164
value: 26.5795
name: k19
type: Parameter

150945
kinetic law: 983927
product: 983915
reactant: 983903
is: GO:0065002
fast: false
reversible: false
name: cTn transport into cytoplasm
type: Reaction

metaid_0000094
constant: true
units: metaid_0000165
value: 9.2511
name: m10
type: Parameter

metaid_0000137
constant: true
units: metaid_0000165
value: 5.4062
name: m17
type: Parameter

metaid_0000103
constant: true
units: metaid_0000165
value: 8.4753
name: m12
type: Parameter

984369
stoichiometry: 1.0
species: 114419
type: SpeciesReference

metaid_0000168
constant: true
units: dimensionless
value: 1.1065
name: i
type: Parameter

metaid_0000140
constant: true
units: metaid_0000164
value: 42.4837
name: k16
type: Parameter

metaid_0000150
constant: true
units: metaid_0000165
value: 0.028
name: m21
type: Parameter

metaid_0000123
constant: true
units: metaid_0000164
value: 23.2876
name: k12
type: Parameter

metaid_0000117
constant: true
units: metaid_0000163
value: 14.6828
name: p4
type: Parameter

984645
stoichiometry: 1.0
species: 114159
type: SpeciesReference

983674
stoichiometry: 1.0
species: 114099
type: SpeciesReference

metaid_0000100
constant: true
units: metaid_0000165
value: 2.6296
name: n5
type: Parameter

983396
exponent: 1.0
scale: 0
multipler: 3600.0
kind: SECOND
type: SBMLUnit

151045
kinetic law: 984075
modifier: 984063
product: 984051
is: GO:0006412
fast: false
reversible: false
name: cXc transcription
type: Reaction

metaid_0000099
constant: true
units: metaid_0000165
value: 1.5293
name: n4
type: Parameter

metaid_0000163
unit: 983408
name: Hour_inv
type: SBMLUnitsDef

metaid_0000128
constant: true
units: metaid_0000164
value: 0.4444
name: g7
type: Parameter

metaid_0000138
constant: true
units: metaid_0000164
value: 49.4094
name: k15
type: Parameter

metaid_0000110
constant: true
units: metaid_0000165
value: 0.7527
name: m7
type: Parameter

metaid_0000077
constant: true
units: metaid_0000164
value: 22.3951
name: k1
type: Parameter

151325
kinetic law: 984560
modifier: 984548
product: 984536
is: GO:0006351
fast: false
reversible: false
name: cP7m transcription
type: Reaction

151345
kinetic law: 984621
modifier: 984608
product: 984596
is: GO:0006412
fast: false
reversible: false
name: cP7c synthesis
type: Reaction

metaid_0000157
constant: true
units: dimensionless
value: 3.1075
name: b
type: Parameter

151085
kinetic law: 984148
product: 984136
reactant: 984124
is: GO:0065002
fast: false
reversible: false
name: cXn transport into cytoplasm
type: Reaction

150925
kinetic law: 983891
product: 983879
reactant: 983867
is: GO:0000060
fast: false
reversible: false
name: cTc transport into nucleus
type: Reaction

metaid_0000143
constant: true
units: metaid_0000165
value: 6.1155
name: m19
type: Parameter

984136
stoichiometry: 1.0
species: 114319
type: SpeciesReference

metaid_0000101
constant: true
units: metaid_0000164
value: 0.5061
name: g5
type: Parameter

metaid_0000162
unit: 983396
name: hour
type: SBMLUnitsDef

metaid_0000129
constant: true
units: metaid_0000164
value: 11.0459
name: g8
type: Parameter

151525
kinetic law: 984921
product: 984909
reactant: 984897
is: GO:0065002
fast: false
reversible: false
name: cP9n transport to cytoplasm
type: Reaction

metaid_0000139
constant: true
units: metaid_0000165
value: 8.671
name: m18
type: Parameter

114339
in compartment: metaid_0000172
has only substance units: false
initial concentration: 0.652
initial amount: NaN
is: C00046
is: CHEBI:33699
boundary condition: false
name: cXm
type: Species
constant: false

metaid_0000078
constant: true
units: metaid_0000163
value: 1.2294
name: p1
type: Parameter

151326
kinetic law: 984584
reactant: 984572
is: GO:0006402
fast: false
reversible: false
name: cP7m degradation
type: Reaction

metaid_0000111
constant: true
units: metaid_0000165
value: 13.7459
name: m8
type: Parameter

metaid_0000156
constant: true
units: dimensionless
value: 2.2802
name: a
type: Parameter

983734
stoichiometry: 1.0
species: 114099
type: SpeciesReference

114179
is: Q8L500
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.734
initial amount: NaN
in compartment: 114039
name: cP9c
type: Species

151545
kinetic law: 984945
reactant: 984933
is: GO:0044257
fast: false
reversible: false
name: cP9c degradation
type: Reaction

metaid_0000142
constant: true
units: metaid_0000164
value: 5.6855
name: g10
type: Parameter

984897
stoichiometry: 1.0
species: 114219
type: SpeciesReference

metaid_0000097
constant: true
units: metaid_0000164
value: 14.605
name: k9
type: Parameter

metaid_0000089
constant: true
units: metaid_0000164
value: 4.0551
name: k4
type: Parameter

metaid_0000126
constant: true
units: metaid_0000163
value: 1.0
name: q3
type: Parameter

metaid_0000165
unit: 983468
unit: 983456
unit: 983444
name: nM_per_hour
type: SBMLUnitsDef

984957
stoichiometry: 1.0
species: 114219
type: SpeciesReference

150785
fast: false
is: GO:0006351
product: 983516
modifier: 983552
modifier: 983528
type: Reaction
modifier: 983540
name: Light independent cLm synthesis
reversible: false
kinetic law: 983564

985017
persistant: true
initial value: true
type: Trigger

983686
stoichiometry: 1.0
species: 114059
type: SpeciesReference

984633
stoichiometry: 1.0
species: 114119
type: SpeciesReference

metaid_0000112
constant: true
units: metaid_0000164
value: 43.7049
name: k6
type: Parameter

114139
initial amount: NaN
is: C00046
boundary condition: false
is: CHEBI:33699
in compartment: metaid_0000172
name: cP7m
has only substance units: false
constant: false
type: Species
initial concentration: 0.0204

983384
exponent: 1.0
scale: -9
multipler: 1.0
kind: MOLE
type: SBMLUnit

metaid_0000175
event assignment: 985029
trigger: 985017
use values from trigger time: true
type: Event

metaid_0000079
constant: true
units: metaid_0000163
value: 31.5166
name: r1
type: Parameter

984825
stoichiometry: 1.0
species: 114179
type: SpeciesReference

metaid_0000155
constant: true
units: dimensionless
value: 1.0
name: lmax
type: Parameter

114239
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000172
name: cPn
type: Species

983420
exponent: 1.0
scale: -9
multipler: 1.0
kind: MOLE
type: SBMLUnit

metaid_0000145
constant: true
units: metaid_0000163
value: 10.4532
name: p7
type: Parameter

114279
in compartment: metaid_0000172
is: C00046
initial amount: NaN
constant: false
initial concentration: 3.6732
is: CHEBI:33699
boundary condition: false
name: cTm
type: Species
has only substance units: false

150786
kinetic law: 983588
reactant: 983576
is: GO:0006402
fast: false
reversible: false
name: cLm degradation
type: Reaction

metaid_0000098
constant: true
units: metaid_0000163
value: 2.5505
name: q2
type: Parameter

metaid_0000164
unit: 983432
unit: 983420
name: nM
type: SBMLUnitsDef

metaid_0000127
constant: true
units: metaid_0000165
value: 1.2
name: m15
type: Parameter

metaid_0000113
constant: true
units: metaid_0000165
value: 0.6703
name: n3
type: Parameter

984124
stoichiometry: 1.0
species: 114359
type: SpeciesReference

metaid_0000174
event assignment: 985005
event assignment: 984993
trigger: 984981
use values from trigger time: true
type: Event

151385
kinetic law: 984693
product: 984681
reactant: 984669
is: GO:0065002
fast: false
reversible: false
name: cP7n transport to cytoplasm
type: Reaction

983879
stoichiometry: 1.0
species: 114299
type: SpeciesReference

metaid_0000154
constant: false
units: dimensionless
value: 1.0
name: ld
type: Parameter

151365
kinetic law: 984657
product: 984645
reactant: 984633
is: GO:0000060
fast: false
reversible: false
name: cP7c transport to nucleus
type: Reaction

150766
kinetic law: 983504
modifier: 983492
product: 983480
is: GO:0009642
is: GO:0006351
fast: false
reversible: false
name: Light dependent cLm synthesis
type: Reaction

metaid_0000144
constant: true
units: metaid_0000164
value: 18.6089
name: k17
type: Parameter

W3 CDTF: Thu Jul 05 15:47:08 BST 2012

W3 CDTF: Sat Mar 03 06:07:14 GMT 2007