974657
units: metaid_0000012
value: 4.8
type: LocalParameter

BIOMD0000000076
time units: metaid_0000010
is part of: sce00561
species: metaid_0000006
units def: metaid_0000009
reaction: metaid_0000008
creator:
  ORG:
    orgname: Stellenbosh University
  n:
    given: Jacky L
    family: Snoep
name: Cronwright2002_Glycerol_Synthesis
is described by: http://identifiers.org/pubmed/12200299
species: metaid_0000004
reaction: metaid_0000007
type: SBMLModel
created:
  W3 CDTF: Mon Nov 06 02:32:33 GMT 2006
curated: true
length unit: length
units def: metaid_0000010
area units: metaid_0000005
occurs in: http://identifiers.org/taxonomy/4932
substance units: metaid_0000009
units def: metaid_0000012
species: metaid_0000005
is: MODEL6624139162
modified:
  W3 CDTF: Wed May 16 11:18:47 BST 2012
compartment: metaid_0000003
notes: . . . SBML level 2 code generated for the JWS Online project by Jacky Snoep using PySCeS Run this model online at http://jjj.biochem.sun.ac.za To cite JWS Online please refer to: Olivier, B.G. and Snoep, J.L. (2004) Web-based modelling using JWS Online , Bioinformatics, 20:2143-2144 . . . . . . Biomodels Curation The model reproduces the flux value of "Gpp p" (rate of Glycerol synthesis) as depicted in Fig 3 of the paper. The model reproduces the flux for early exponential phase , however it can be used to reproduce the values for other phases by plugging in appropriate values for maximal rates as given in Table 1 and metabolite concentrations as given in Table 2 of the paper. The model was succesfully reproduced using Jarnac.
is: GO:0006114
volume units: metaid_0000004
units def: metaid_0000011
creator:
  ORG:
    orgname: California Institute of Technology
  n:
    given: Harish
    family: Dharuri

974609
units: metaid_0000012
value: 1.87
type: LocalParameter

974488
exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

974500
exponent: -1.0
scale: 0
multipler: 60.0
kind: SECOND
type: SBMLUnit

metaid_0000004
has only substance units: false
type: Species
boundary condition: false
is: C00093
in compartment: metaid_0000003
name: Glycerol 3-phosphate
constant: false
initial amount: NaN
initial concentration: 0.0
is: CHEBI:15978

974633
units: dimensionless
value: 10000.0
type: LocalParameter

974597
units: metaid_0000012
value: 0.54
type: LocalParameter

metaid_0000010
unit: 974463
name: minute
type: SBMLUnitsDef

metaid_0000008
kinetic law: 974765
product: 974753
reactant: 974741
is: R00841
is: http://identifiers.org/ec-code/3.1.3.21
fast: false
reversible: true
name: Glycerol 3-phosphatase
type: Reaction

974524
exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

974548
stoichiometry: 1.0
species: metaid_0000004
type: SpeciesReference

974789
units: metaid_0000012
value: 3.5
type: LocalParameter

metaid_0000003
is: GO:0005737
constant: true
size: 1.0
spatial dimensions: 3.0
name: Cytoplasm
type: Compartment

974693
units: metaid_0000012
value: 2.17
type: LocalParameter

974717
units: metaid_0000012
value: 0.93
type: LocalParameter

974801
units: metaid_0000012
value: 1.0
type: LocalParameter

metaid_0000007
kinetic law: 974561
product: 974548
reactant: 974536
is: R00842
is: http://identifiers.org/ec-code/1.1.1.94
fast: false
reversible: true
name: Glycerol 3-phosphate dehydrogenase
type: Reaction

974476
exponent: 1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

974451
exponent: 1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

974741
stoichiometry: 1.0
species: metaid_0000004
type: SpeciesReference

metaid_0000006
type: Species
has only substance units: false
in compartment: metaid_0000003
constant: false
initial concentration: 0.59
boundary condition: true
initial amount: NaN
name: DHAP
is: C00111
is: CHEBI:16108

974705
units: metaid_0000012
value: 2.0
type: LocalParameter

974645
units: metaid_0000012
value: 6.01
type: LocalParameter

974512
exponent: 1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

metaid_0000012
unit: 974524
unit: 974512
name: mM
type: SBMLUnitsDef

974621
units: metaid_0000012
value: 1.45
type: LocalParameter

974585
units: metaid_0000012
value: 0.023
type: LocalParameter

974573
units: metaid_0000011
value: 47.0
type: LocalParameter

974777
units: metaid_0000011
value: 53.0
type: LocalParameter

974536
stoichiometry: 1.0
species: metaid_0000006
type: SpeciesReference

metaid_0000005
initial concentration: 15.1
in compartment: metaid_0000003
is: C00116
type: Species
has only substance units: false
name: Glycerol
is: CHEBI:17754
constant: false
boundary condition: true
initial amount: NaN

974669
units: metaid_0000012
value: 2.37
type: LocalParameter

974681
units: metaid_0000012
value: 0.73
type: LocalParameter

974753
stoichiometry: 1.0
species: metaid_0000005
type: SpeciesReference

metaid_0000011
unit: 974500
unit: 974488
unit: 974476
name: mM_per_minute
type: SBMLUnitsDef

974729
units: metaid_0000012
value: 1.2
type: LocalParameter

974463
exponent: 1.0
scale: 0
multipler: 60.0
kind: SECOND
type: SBMLUnit

974813
units: metaid_0000012
value: 1.0
type: LocalParameter

metaid_0000009
unit: 974451
name: millimole
type: SBMLUnitsDef