684108
units: metaid_0000056
value: 0.048
type: LocalParameter

684098
units: metaid_0000059
value: 0.13
type: LocalParameter

684090
units: metaid_0000059
value: 0.71
type: LocalParameter

684080
units: metaid_0000057
value: 1528.62
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_61daa10c_e8b4_4b29_87ae_1b13e935fe70
stoichiometry: 1.0
species: metaid_0000016
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#_74a76566_dcc3_4daa_b2fe_d961697f2c47
stoichiometry: 1.0
species: metaid_0000013
type: SpeciesReference

684070
units: metaid_0000059
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_118c4537_9c0b_4bc4_9130_0c20fe51d624
exponent: 1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

http://identifiers.org/biomodels.db/BIOMD0000000061#_1f49afbe_bac9_453f_aa96_12cad7121868
stoichiometry: 1.0
species: metaid_0000024
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#_083386de_6501_4745_a110_38b4c2e4afb1
exponent: 1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

684060
units: metaid_0000059
value: 4.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#e23beb45_dd2f_4666_b0e4_37e2ffd68c85
stoichiometry: 59.0
species: metaid_0000005
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#_39e65deb_1a75_4dbe_9409_bbab4519585a
exponent: 2.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

http://identifiers.org/biomodels.db/BIOMD0000000061#ef63e725_48e0_4acf_ab98_9289f6c1bffe
stoichiometry: 1.0
species: metaid_0000018
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#_960c10b9_c405_4329_a566_2c3a836a3645
stoichiometry: 1.0
species: metaid_0000011
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#_5d6aca73_30d4_4d3b_955a_3804ed8bb07a
stoichiometry: 1.0
species: metaid_0000023
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#_64cb0776_7e67_413d_b9d0_bc8b72b446a2
stoichiometry: 1.0
species: metaid_0000008
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#_2e566a56_38ad_4ae5_8383_fb43de51c586
stoichiometry: 1.0
species: metaid_0000011
type: SpeciesReference

metaid_0000008
initial amount: NaN
type: Species
in compartment: metaid_0000060
is: C00008
is: CHEBI:16761
constant: false
boundary condition: false
initial concentration: 1.5
name: ADP
has only substance units: false

684092
units: dimensionless
value: 59.0
type: LocalParameter

684072
units: metaid_0000059
value: 0.01
type: LocalParameter

metaid_0000049
fast: false
reversible: true
name: Cyanide flow
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000061#_12ac7f0c_59e5_485d_b497_0b3044e50de8
stoichiometry: 1.0
species: metaid_0000012
type: SpeciesReference

684040
units: metaid_0000059
value: 0.37
type: LocalParameter

metaid_0000028
constant: false
name: Mixed flow glucose
boundary condition: true
is: C00293
type: Species
in compartment: metaid_0000003
is: CHEBI:17234
initial concentration: 24.0
has only substance units: false
initial amount: NaN

684091
units: metaid_0000056
value: 16.72
type: LocalParameter

metaid_0000009
in compartment: metaid_0000060
initial concentration: 0.49
initial amount: NaN
name: Fructose-6-Phosphate
is: C00085
has only substance units: false
type: Species
is: CHEBI:20935
boundary condition: false
constant: false

http://identifiers.org/biomodels.db/BIOMD0000000061#f500a575_52b0_4fa8_b894_4dd2d1c4ebf2
stoichiometry: 1.0
species: metaid_0000010
type: SpeciesReference

684099
units: metaid_0000059
value: 0.13
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_63d89a94_defe_4b59_82e9_3bd53d061d0b
exponent: 1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

684109
units: metaid_0000057
value: 0.00283828
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_79076bbf_675a_4e5f_a48f_444c12aaef3d
exponent: -1.0
scale: 0
multipler: 60.0
kind: SECOND
type: SBMLUnit

metaid_0000048
fast: false
reversible: true
name: Cyanide-Acetaldehyde flow
type: Reaction

metaid_0000029
is version of: GO:0015758
fast: false
reversible: true
name: Glucose Mixed flow to extracellular medium
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000061#_119b6ee4_6932_458f_8c59_83d752fb626f
stoichiometry: 1.0
species: metaid_0000009
type: SpeciesReference

684094
units: metaid_0000055
value: 81.4797
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#ec75c178_9a95_4d87_b97f_069751d9910e
stoichiometry: 1.0
species: metaid_0000006
type: SpeciesReference

metaid_0000016
constant: false
type: Species
name: Phosphoenolpyruvate
is: CHEBI:18021
boundary condition: false
has only substance units: false
initial concentration: 0.04
initial amount: NaN
in compartment: metaid_0000060
is: C00074

684104
units: metaid_0000056
value: 24.7
type: LocalParameter

metaid_0000057
name: mM inverse min inverse
type: SBMLUnitsDef

metaid_0000006
boundary condition: false
type: Species
initial concentration: 2.1
is: C00002
initial amount: NaN
has only substance units: false
name: ATP
in compartment: metaid_0000060
is: CHEBI:15422
constant: false

684084
units: metaid_0000059
value: 0.2
type: LocalParameter

684042
units: metaid_0000059
value: 0.1
type: LocalParameter

metaid_0000047
fast: false
reversible: true
name: Acetaldehyde flow
type: Reaction

684032
units: dimensionless
value: 59.0
type: LocalParameter

684093
units: metaid_0000056
value: 0.048
type: LocalParameter

metaid_0000017
is: C00022
type: Species
name: Pyruvate
has only substance units: false
initial amount: NaN
in compartment: metaid_0000060
is: CHEBI:15361
initial concentration: 8.7
boundary condition: false
constant: false

metaid_0000046
fast: false
reversible: true
name: Acetaldehyde out
type: Reaction

metaid_0000056
name: minute inverse
type: SBMLUnitsDef

metaid_0000007
has only substance units: false
is: CHEBI:15954
constant: false
initial amount: NaN
initial concentration: 4.2
name: Glucose-6-Phosphate
boundary condition: false
type: Species
in compartment: metaid_0000060
is: C00092

http://identifiers.org/biomodels.db/BIOMD0000000061#ee2963db_b41e_4123_befb_9c460f556c1b
exponent: -1.0
scale: 0
multipler: 60.0
kind: SECOND
type: SBMLUnit

http://identifiers.org/biomodels.db/BIOMD0000000061#_9d1ddd02_fd4f_4ad2_b4ad_db2c94b45bb5
stoichiometry: 1.0
species: metaid_0000022
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#_7400aec1_d95d_4376_b363_06a50703ef82
stoichiometry: 1.0
species: metaid_0000006
type: SpeciesReference

metaid_0000045
is version of: GO:0015850
fast: false
reversible: true
name: Glycerol flow
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000061#f2cf211a_7cd0_4503_be6f_f339a26a11f1
stoichiometry: 1.0
species: metaid_0000013
type: SpeciesReference

684106
units: dimensionless
value: 59.0
type: LocalParameter

684096
units: metaid_0000059
value: 0.034
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_0794fc79_0d5f_4222_bbbc_1e2326669c38
stoichiometry: 1.0
species: metaid_0000008
type: SpeciesReference

metaid_0000031
reversible: true
is: R00299
name: Hexokinase
is: http://identifiers.org/ec-code/2.7.1.2
fast: false
is homolog to: REACT 1318
type: Reaction

metaid_0000018
name: Acetaldehyde
boundary condition: false
initial concentration: 1.48153
is: C00084
has only substance units: false
constant: false
initial amount: NaN
is: CHEBI:15343
type: Species
in compartment: metaid_0000060

684045
units: metaid_0000059
value: 0.8
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_6d4d3794_25a6_4a53_a3cc_7471aef6a63a
exponent: 1.0
scale: 0
multipler: 60.0
kind: SECOND
type: SBMLUnit

http://identifiers.org/biomodels.db/BIOMD0000000061#_421e258f_b142_4175_bb14_4d20cd0eef5d
exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

http://identifiers.org/biomodels.db/BIOMD0000000061#_4f905db3_5c49_4efb_a6b1_e7d11a0d2fe4
stoichiometry: 1.0
species: metaid_0000017
type: SpeciesReference

684082
units: metaid_0000055
value: 343.096
type: LocalParameter

684058
units: dimensionless
value: 5.0
type: LocalParameter

metaid_0000004
boundary condition: false
has only substance units: false
type: Species
name: Extracellular glucose
is: CHEBI:17234
is: C00293
initial amount: NaN
initial concentration: 6.7
constant: false
in compartment: metaid_0000003

http://identifiers.org/biomodels.db/BIOMD0000000061#_4a1dc7b3_76f0_4709_9ef5_e3e4c71dd554
stoichiometry: 1.0
species: metaid_0000020
type: SpeciesReference

metaid_0000059
name: milliMolar
type: SBMLUnitsDef

http://identifiers.org/biomodels.db/BIOMD0000000061#a9d61abd_b57d_4ddf_9f4c_9d3fb6dcde9a
stoichiometry: 1.0
species: metaid_0000026
type: SpeciesReference

684044
units: metaid_0000055
value: 496.042
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#d6300fd3_d770_42d6_8184_1abcb1ebc35a
stoichiometry: 1.0
species: metaid_0000013
type: SpeciesReference

684030
units: metaid_0000055
value: 1014.96
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_881d6095_948b_4e61_9d05_d30843f24102
stoichiometry: 1.0
species: metaid_0000004
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#_7c1579e5_28d1_4638_99dc_4eda966f30f1
stoichiometry: 1.0
species: metaid_0000012
type: SpeciesReference

metaid_0000044
is version of: GO:0015850
fast: false
reversible: true
name: Glycerol out
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000061#f63f9d48_4e94_40a2_9d1d_f4a43226a470
stoichiometry: 1.0
species: metaid_0000006
type: SpeciesReference

metaid_0000019
is: C00469
is: CHEBI:16236
constant: false
boundary condition: false
has only substance units: false
initial concentration: 19.2379
initial amount: NaN
in compartment: metaid_0000060
type: Species

http://identifiers.org/biomodels.db/BIOMD0000000061#_75c64a11_f5f1_4156_9b7e_272f79cdd73f
stoichiometry: 1.0
species: metaid_0000021
type: SpeciesReference

metaid_0000030
type: Reaction
is homolog to: REACT 212
fast: false
name: Glucose uptake
reversible: true
is version of: GO:0046323

http://identifiers.org/biomodels.db/BIOMD0000000061#_09fab31a_dd6d_41eb_88bf_0cfb4a731a2d
stoichiometry: 1.0
species: metaid_0000026
type: SpeciesReference

684095
units: metaid_0000059
value: 25.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_879d644d_5ae0_4267_a5f0_28be6102ad4a
stoichiometry: 1.0
species: metaid_0000025
type: SpeciesReference

684115
units: metaid_0000057
value: 133.333
type: LocalParameter

metaid_0000005
name: Cytosolic glucose
type: Species
has only substance units: false
is: C00293
initial amount: NaN
initial concentration: 0.573074
in compartment: metaid_0000060
is: CHEBI:17234
boundary condition: false
constant: false

metaid_0000058
name: mM squared
type: SBMLUnitsDef

684043
units: metaid_0000059
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_2929d5a8_de91_49fd_99d4_7eb359909293
stoichiometry: 1.0
species: metaid_0000023
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#_3b25455a_aefa_4944_bc7c_d00b4835b645
stoichiometry: 1.0
species: metaid_0000018
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#a3edc5cb_d3c3_4bbd_98d2_9ce64ce81983
stoichiometry: 1.0
species: metaid_0000014
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#_8ab7b7aa_6696_4b76_8841_7814d9cf0520
exponent: -1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

http://identifiers.org/biomodels.db/BIOMD0000000061#_2b34cc13_77a2_4f0e_a767_8ffd8a76dfbf
stoichiometry: 1.0
species: metaid_0000006
type: SpeciesReference

metaid_0000012
is: C00111
boundary condition: false
initial amount: NaN
initial concentration: 2.95
is: CHEBI:16108
name: Dihydroxyacetone phosphate
constant: false
in compartment: metaid_0000060
type: Species
has only substance units: false

http://identifiers.org/biomodels.db/BIOMD0000000061#df8d9c46_eda6_4bd4_93ef_77618e851947
stoichiometry: 1.0
species: metaid_0000011
type: SpeciesReference

metaid_0000052
fast: false
reversible: true
is version of: GO:0004017
is version of: http://identifiers.org/ec-code/2.7.4.3
name: Adenylate kinase
type: Reaction

684113
units: metaid_0000056
value: 3.2076
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#b6d7d2ae_8a0c_4cdd_bb6b_97d6616d5b08
exponent: -2.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

684056
units: metaid_0000059
value: 2.0
type: LocalParameter

metaid_0000022
initial concentration: 1.68478
is: C00116
type: Species
name: Extracellular glycerol
constant: false
in compartment: metaid_0000003
initial amount: NaN
has only substance units: false
boundary condition: false
is: CHEBI:17754

http://identifiers.org/biomodels.db/BIOMD0000000061#f0f0074b_3ebe_4a09_8e62_e278b1ee4def
exponent: 1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

metaid_0000032
reversible: true
is homolog to: REACT 1164
is: R00771
type: Reaction
fast: false
name: Phosphoglucoisomerase
is: http://identifiers.org/ec-code/5.3.1.9

684037
units: metaid_0000059
value: 7.2
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#a6e332e4_36cf_4d9e_aa15_3abaf849fde8
stoichiometry: 1.0
species: metaid_0000016
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#_304e457d_1dc4_47d3_93e7_d2e42dd96373
stoichiometry: 59.0
species: metaid_0000018
type: SpeciesReference

684085
units: metaid_0000059
value: 0.17
type: LocalParameter

metaid_0000042
is version of: GO:0015850
fast: false
reversible: true
name: Ethanol flow
type: Reaction

metaid_0000013
name: NAD
initial amount: NaN
is: C00003
initial concentration: 0.65
constant: false
in compartment: metaid_0000060
type: Species
is: CHEBI:15846
has only substance units: false
boundary condition: false

684066
units: metaid_0000055
value: 116.365
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_46d9dab9_9e29_4858_8776_b7de7addd9f5
stoichiometry: 1.0
species: metaid_0000015
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#a42887da_565a_4ece_a2d1_0b3589793d3c
stoichiometry: 1.0
species: metaid_0000015
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#f61b76b7_840e_486b_87f8_d64ca98435c5
stoichiometry: 1.0
species: metaid_0000007
type: SpeciesReference

684057
units: metaid_0000059
value: 0.081
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_6a4763e1_5c0c_4676_a5dc_0757b4518b52
stoichiometry: 1.0
species: metaid_0000007
type: SpeciesReference

metaid_0000003
is version of: GO:0005576
constant: true
size: 1.0
spatial dimensions: 3.0
type: Compartment

metaid_0000053
name: millimole
type: SBMLUnitsDef

684114
units: metaid_0000057
value: 432.9
type: LocalParameter

684046
units: metaid_0000059
value: 0.15
type: LocalParameter

metaid_0000023
in compartment: metaid_0000003
name: Extracellular acetaldehyde
has only substance units: false
initial concentration: 1.28836
type: Species
is: CHEBI:15343
is: C00084
constant: false
boundary condition: false
initial amount: NaN

http://identifiers.org/biomodels.db/BIOMD0000000061#c201b61c_38dd_4647_9d78_a69c379e487e
stoichiometry: 1.0
species: metaid_0000007
type: SpeciesReference

684076
units: dimensionless
value: 0.0055
type: LocalParameter

684086
units: metaid_0000055
value: 53.1328
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_29208c82_119f_4a46_8597_7053bb7dfe49
stoichiometry: 1.0
species: metaid_0000006
type: SpeciesReference

metaid_0000043
has part: R01011
has part: http://identifiers.org/ec-code/1.1.1.6
name: Glycerol synthesis
has part: R01034
type: Reaction
has part: http://identifiers.org/ec-code/2.7.1.29
fast: false
reversible: true

684036
units: metaid_0000059
value: 1.2
type: LocalParameter

metaid_0000033
fast: false
type: Reaction
name: Phosphofructokinase
reversible: true
is: http://identifiers.org/ec-code/2.7.1.11
is: R00756
is homolog to: REACT 1840

684100
units: metaid_0000056
value: 1.9
type: LocalParameter

684067
units: dimensionless
value: 0.055
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_177e6dd2_e9be_4176_a0bc_6ef6886bcb38
stoichiometry: 1.0
species: metaid_0000008
type: SpeciesReference

684110
units: metaid_0000056
value: 0.048
type: LocalParameter

684053
units: metaid_0000055
value: 2207.82
type: LocalParameter

metaid_0000060
is version of: GO:0005829
constant: true
size: 1.0
spatial dimensions: 3.0
type: Compartment

metaid_0000054
name: minute
type: SBMLUnitsDef

684073
units: metaid_0000059
value: 0.06
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_47389efc_255e_4ee9_b160_3f75f188ae2b
exponent: -1.0
scale: 0
multipler: 60.0
kind: SECOND
type: SBMLUnit

684049
units: dimensionless
value: 0.13
type: LocalParameter

metaid_0000020
initial amount: NaN
type: Species
in compartment: metaid_0000003
is: C000469
has only substance units: false
initial concentration: 16.4514
boundary condition: false
constant: false
name: Extracellular ethanol
is: CHEBI:16236

metaid_0000014
in compartment: metaid_0000060
type: Species
name: 1,3-Bisphosphoglycerate
is: C00236
initial concentration: 2.7E-4
initial amount: NaN
has only substance units: false
is: CHEBI:16001
boundary condition: false
constant: false

684068
units: metaid_0000055
value: 833.858
type: LocalParameter

684101
units: dimensionless
value: 59.0
type: LocalParameter

metaid_0000040
is: R00754
name: Alcohol dehydrogenase
is: http://identifiers.org/ec-code/1.1.1.1
type: Reaction
is homolog to: REACT 799
fast: false
reversible: true

684087
units: metaid_0000059
value: 0.3
type: LocalParameter

metaid_0000034
is: R01070
reversible: true
is: http://identifiers.org/ec-code/4.1.2.13
type: Reaction
fast: false
name: Aldolase

684089
units: metaid_0000059
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_5b7cd6e0_9091_465e_bb8a_b670219d89cc
stoichiometry: 1.0
species: metaid_0000009
type: SpeciesReference

684033
units: metaid_0000059
value: 1.7
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_3f9fc613_7c42_4379_99cc_b949fc50d3ad
stoichiometry: 1.0
species: metaid_0000028
type: SpeciesReference

684054
units: metaid_0000059
value: 0.3
type: LocalParameter

684028
units: metaid_0000056
value: 0.048
type: LocalParameter

metaid_0000055
name: mM per minute
type: SBMLUnitsDef

684074
units: metaid_0000055
value: 833.858
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000061#_29cfbbe8_3aa8_46da_b499_26f6fdd36611
stoichiometry: 1.0
species: metaid_0000004
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000061#c915d7e2_bb7e_4a07_b372_8a0c8021969b
stoichiometry: 1.0
species: metaid_0000017
type: SpeciesReference

metaid_0000021
constant: false
has only substance units: false
initial amount: NaN
initial concentration: 4.196
is: C00116
name: Glycerol
type: Species
is: CHEBI:17754
in compartment: metaid_0000060
boundary condition: false

684048
units: metaid_0000055
value: 496.042
type: LocalParameter

684112
units: metaid_0000057
value: 2.25932
type: LocalParameter

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stoichiometry: 1.0
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684102
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value: 0.048
type: LocalParameter

metaid_0000041
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reversible: true
name: Ethanol out
type: Reaction

metaid_0000015
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is: CHEBI:16908
constant: false
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684069
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684034
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metaid_0000035
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684088
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type: LocalParameter

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684051
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value: 0.021
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stoichiometry: 1.0
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metaid_0000026
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stoichiometry: 1.0
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stoichiometry: 1.0
species: metaid_0000006
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is: http://identifiers.org/ec-code/1.2.1.12
fast: false
is: R01061
reversible: true
is homolog to: REACT 587
type: Reaction

684061
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value: 10.0
type: LocalParameter

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stoichiometry: 1.0
species: metaid_0000027
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stoichiometry: 1.0
species: metaid_0000020
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stoichiometry: 1.0
species: metaid_0000015
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stoichiometry: 2.0
species: metaid_0000008
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metaid_0000027
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initial concentration: 5.6
boundary condition: true
is: CHEBI:17514
type: Species
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name: Mixed flow cyanide
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stoichiometry: 1.0
species: metaid_0000008
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exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

684052
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value: 0.15
type: LocalParameter

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species: metaid_0000008
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684062
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value: 116.365
type: LocalParameter

metaid_0000037
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name: Phosphoenolpyruvate synthesis
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is homolog to: REACT 1771
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type: Reaction
has part: http://identifiers.org/ec-code/4.2.1.11
has part: R00658
has part: R01512

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684078
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value: 443866.0
type: LocalParameter

metaid_0000038
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is homolog to: REACT 1911
is: R00200
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name: Pyruvate kinase
type: Reaction
is: http://identifiers.org/ec-code/2.7.1.40

BIOMD0000000061
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reaction: metaid_0000039
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reaction: metaid_0000030
reaction: metaid_0000043
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substance units: metaid_0000053
units def: metaid_0000056
species: metaid_0000012
species: metaid_0000004
species: metaid_0000019
species: metaid_0000022
reaction: metaid_0000040
reaction: metaid_0000050
reaction: metaid_0000041
species: metaid_0000017
species: metaid_0000020
compartment: metaid_0000060
species: metaid_0000009
species: metaid_0000027
is version of: GO:0006096
units def: metaid_0000059
creator:
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    orgname: California Institute of Technology
  n:
    given: Harish
    family: Dharuri
species: metaid_0000011
reaction: metaid_0000036
is: sce00010
reaction: metaid_0000032
units def: metaid_0000057
species: metaid_0000006
species: metaid_0000018
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reaction: metaid_0000031
is: MODEL6624167348
is homolog to: REACT 1383
reaction: metaid_0000052
reaction: metaid_0000047
reaction: metaid_0000051
species: metaid_0000016
is described by: http://identifiers.org/pubmed/11744196
species: metaid_0000008
species: metaid_0000021
species: metaid_0000026
volume units: metaid_0000323
area units: area
length unit: length
modified:
  W3 CDTF: Mon Jun 03 15:20:37 BST 2013
species: metaid_0000010
species: metaid_0000024
occurs in: http://identifiers.org/taxonomy/4932
name: Hynne2001_Glycolysis
reaction: metaid_0000038
type: SBMLModel
curated: true
reaction: metaid_0000034
reaction: metaid_0000029
reaction: metaid_0000037
species: metaid_0000015
reaction: metaid_0000048
species: metaid_0000007
compartment: metaid_0000003
reaction: metaid_0000033
reaction: metaid_0000044
creator:
  ORG:
    orgname: Stellenbosh University
  n:
    given: Jacky L
    family: Snoep
reaction: metaid_0000049
created:
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reaction: metaid_0000045
units def: metaid_0000054
species: metaid_0000013
time units: metaid_0000054
species: metaid_0000005
species: metaid_0000023
species: metaid_0000025
units def: metaid_0000058
notes: The model reproduces Fig 6 of the paper. The stoichiometry and rate of reactions involving uptake of metabolites from extracellular medium have been changed corresponding to Yvol (ratio of extracellular volume to cytosolic volume) mentioned in the publication. The extracellular and cytosolic compartments have been set to 1. Concentration of extracellular glucose, GlcX, is set to 6.7 according to the equation for cellular glucose uptake rate in Table 7 of the paper. The model was successfully tested on MathSBML and Jarnac . . . SBML level 2 code generated for the JWS Online project by Jacky Snoep using PySCeS Run this model online at http://jjj.biochem.sun.ac.za To cite JWS Online please refer to: Olivier, B.G. and Snoep, J.L. (2004) Web-based modelling using JWS Online , Bioinformatics, 20:2143-2144 . . . . . . This model originates from BioModels Database: A Database of Annotated Published Models. It is copyright (c) 2005-2009 The BioModels Team. For more information see the terms of use . To cite BioModels Database, please use Le Novère N., Bornstein B., Broicher A., Courtot M., Donizelli M., Dharuri H., Li L., Sauro H., Schilstra M., Shapiro B., Snoep J.L., Hucka M. (2006) BioModels Database: A Free, Centralized Database of Curated, Published, Quantitative Kinetic Models of Biochemical and Cellular Systems Nucleic Acids Res., 34: D689-D691.

metaid_0000010
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type: Species
is: CHEBI:16905
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initial concentration: 4.64
initial amount: NaN
name: Fructose 1,6-bisphosphate
has only substance units: false

684063
units: metaid_0000059
value: 1.23
type: LocalParameter

684039
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value: 51.7547
type: LocalParameter

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stoichiometry: 59.0
species: metaid_0000019
type: SpeciesReference

metaid_0000024
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type: Species
initial concentration: 5.20358
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is: CHEBI:17514
is: C00177
name: Extracellular cyanide
constant: false
initial amount: NaN
in compartment: metaid_0000003

metaid_0000050
is version of: GO:0043211
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reversible: true
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type: Reaction

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constant: false
name: AMP

684050
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value: 45.4327
type: LocalParameter

metaid_0000039
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reversible: true
name: Pyruvate decarboxylase
type: Reaction

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stoichiometry: 1.0
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684064
units: metaid_0000059
value: 1.27
type: LocalParameter

metaid_0000011
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initial concentration: 0.115
name: Glyceraldehyde 3-phosphate
constant: false
is: C00118
type: Species

684038
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value: 1014.96
type: LocalParameter

metaid_0000051
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reversible: true
name: ATP consumption
type: Reaction