509020
constant: true
units: 999702
value: 0.3
name: K1
type: Parameter

999822
stoichiometry: 1.0
species: metaid_0000008
type: SpeciesReference

999870
stoichiometry: 1.0
species: metaid_0000009
type: SpeciesReference

509016
constant: true
units: metaid_0000017
value: 10.0
name: tau1
type: Parameter

999906
stoichiometry: 1.0
species: metaid_0000008
type: SpeciesReference

509025
constant: true
units: 999786
value: 0.5
name: kdp
type: Parameter

999942
stoichiometry: 1.0
species: metaid_0000009
type: SpeciesReference

999762
exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

metaid_0000012
kinetic law: 999894
modifier: 999882
product: 999870
reactant: 999858
is version of: GO:0006412
fast: false
reversible: false
name: dClk production
type: Reaction

999774
exponent: -1.0
scale: 0
multipler: 3600.0
kind: SECOND
type: SBMLUnit

999954
stoichiometry: 1.0
species: metaid_0000007
type: SpeciesReference

509017
constant: true
units: metaid_0000017
value: 10.0
name: tau2
type: Parameter

999726
exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

metaid_0000007
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000005
type: Species

999798
exponent: -1.0
scale: 0
multipler: 3600.0
kind: SECOND
type: SBMLUnit

999810
stoichiometry: 1.0
species: metaid_0000007
type: SpeciesReference

BIOMD0000000025
rule: 509008
reaction: metaid_0000012
compartment: metaid_0000005
parameter: 509025
units def: 999738
area units: area
species: metaid_0000007
created:
  W3 CDTF: Wed Jun 29 12:01:49 BST 2005
parameter: 509022
creator:
  ORG:
    orgname: EMBL-EBI
  n:
    given: Nicolas
    family: Le Novère
volume units: metaid_0000323
type: SBMLModel
reaction: metaid_0000013
parameter: 509016
reaction: metaid_0000014
is: dme04710
parameter: 509013
notes: This model originates from BioModels Database: A Database of Annotated Published Models. It is copyright (c) 2005-2010 The BioModels Team. For more information see the terms of use . To cite BioModels Database, please use Le Novère N., Bornstein B., Broicher A., Courtot M., Donizelli M., Dharuri H., Li L., Sauro H., Schilstra M., Shapiro B., Snoep J.L., Hucka M. (2006) BioModels Database: A Free, Centralized Database of Curated, Published, Quantitative Kinetic Models of Biochemical and Cellular Systems Nucleic Acids Res., 34: D689-D691.
species: metaid_0000010
rule: 509010
substance units: metaid_0000018
parameter: 509020
units def: 999702
parameter: 509017
time units: metaid_0000017
occurs in: http://identifiers.org/taxonomy/7227
is: MODEL6618294363
length unit: length
name: Smolen2002_CircClock
is version of: GO:0007623
rule: 509011
species: metaid_0000009
parameter: 509014
parameter: 509024
species: metaid_0000008
units def: 999786
units def: metaid_0000017
modified:
  W3 CDTF: Tue May 15 22:41:34 BST 2012
units def: metaid_0000018
curated: true
parameter: 509021
reaction: metaid_0000011
parameter: 509018
is described by: http://identifiers.org/pubmed/12414672

metaid_0000017
unit: 999678
name: hour (new default)
type: SBMLUnitsDef

999702
unit: 999726
unit: 999714
name: nM
type: SBMLUnitsDef

metaid_0000013
kinetic law: 999930
product: 999918
reactant: 999906
is version of: GO:0030163
fast: false
reversible: false
name: Per degradation
type: Reaction

metaid_0000011
kinetic law: 999846
modifier: 999834
product: 999822
reactant: 999810
is version of: GO:0006412
fast: false
reversible: false
name: Per production
type: Reaction

509022
constant: true
units: 999702
value: 0.1
name: K2
type: Parameter

509018
constant: true
units: 999738
value: 0.5
name: Vsp
type: Parameter

metaid_0000008
is: P07663
constant: false
boundary condition: false
has only substance units: false
initial concentration: 5.0E-16
initial amount: NaN
in compartment: metaid_0000005
type: Species

999738
unit: 999774
unit: 999762
unit: 999750
name: nM_per_hr
type: SBMLUnitsDef

999678
exponent: 1.0
scale: 0
multipler: 3600.0
kind: SECOND
type: SBMLUnit

999750
exponent: 1.0
scale: -9
multipler: 1.0
kind: MOLE
type: SBMLUnit

metaid_0000014
kinetic law: 999966
product: 999954
reactant: 999942
is version of: GO:0030163
fast: false
reversible: false
name: dClk degradation
type: Reaction

999858
stoichiometry: 1.0
species: metaid_0000007
type: SpeciesReference

metaid_0000018
unit: 999690
name: nanomole (new default)
type: SBMLUnitsDef

509013
notes: free dClk at time t-tau1
constant: false
units: 999702
value: NaN
name: dClkF_tau1
type: Parameter

metaid_0000010
is: O61735
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000005
name: free dClk
type: Species

509021
constant: true
units: 999738
value: 0.25
name: Vsc
type: Parameter

999714
exponent: 1.0
scale: -9
multipler: 1.0
kind: MOLE
type: SBMLUnit

999918
stoichiometry: 1.0
species: metaid_0000007
type: SpeciesReference

999786
unit: 999798
name: per_hr
type: SBMLUnitsDef

metaid_0000009
has part: O61735
has part: P07663
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.0E-16
initial amount: NaN
in compartment: metaid_0000005
type: Species

509024
constant: true
units: 999786
value: 0.5
name: kdc
type: Parameter

metaid_0000005
is: GO:0005623
constant: true
size: 1.0E-15
spatial dimensions: 3.0
type: Compartment

999690
exponent: 1.0
scale: -9
multipler: 1.0
kind: MOLE
type: SBMLUnit

509014
notes: free dClk at time t-tau2
constant: false
units: 999702
value: NaN
name: dClkF_tau2
type: Parameter