038527
stoichiometry: 1.0
species: 466672
type: SpeciesReference

207659
units: 017602
value: 0.0
type: LocalParameter

255097
stoichiometry: 1.0
species: 462073
type: SpeciesReference

120096
units: 017602
value: 0.0
type: LocalParameter

077457
units: 017602
value: 0.0
type: LocalParameter

212809
stoichiometry: 1.0
species: 482011
type: SpeciesReference

305321
stoichiometry: 1.0
species: 492310
type: SpeciesReference

067949
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species: 469972
type: SpeciesReference

042823
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type: LocalParameter

239286
units: 017602
value: 0.0
type: LocalParameter

137305
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type: LocalParameter

497410
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Uridine_C9H12N2O6
type: Species

035080
value: 0.0
type: LocalParameter

513668
kinetic law: 115913
product: 115901
reactant: 115889
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_fructoselysine_exchange
type: Reaction

275726
units: 017602
value: 0.0
type: LocalParameter

536346
reactant: 264355
product: 264391
reactant: 264379
reactant: 264367
type: Reaction
product: 264404
product: 264428
product: 264416
kinetic law: 264440
notes: GENE_ASSOCIATION: b2476 PROTEIN_ASSOCIATION: PurC SUBSYSTEM: S_Purine_and_Pyrimidine_Biosynthesis PROTEIN_CLASS: 6.3.2.6
reversible: false
name: R_phosphoribosylaminoimidazolesuccinocarboxamide_synthase
fast: false

161862
stoichiometry: 1.0
species: 477891
type: SpeciesReference

209066
stoichiometry: 1.0
species: 478591
type: SpeciesReference

037721
stoichiometry: 1.0
species: 478711
type: SpeciesReference

187732
value: 0.0
type: LocalParameter

532926
fast: false
name: R_Phosphatidate_phosphatase__periplasmic__n_C120_
product: 242260
reversible: false
type: Reaction
kinetic law: 242272
product: 242248
reactant: 242236
notes: GENE_ASSOCIATION: b1278 PROTEIN_ASSOCIATION: PgpB SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.3.4
reactant: 242224

200249
units: 017602
value: 0.0
type: LocalParameter

097938
stoichiometry: 1.0
species: 478711
type: SpeciesReference

525127
reversible: false
name: R_indole_3_glycerol_phosphate_synthase
product: 187017
type: Reaction
product: 187041
reactant: 187005
reactant: 186993
notes: GENE_ASSOCIATION: b1262 PROTEIN_ASSOCIATION: TrpCec SUBSYSTEM: S_Tyrosine__Tryptophan__and_Phenylalanine_Metabolism PROTEIN_CLASS: 4.1.1.48
fast: false
kinetic law: 187053
product: 187029

272933
stoichiometry: 2.0
species: 478591
type: SpeciesReference

225077
stoichiometry: 1.0
species: 472232
type: SpeciesReference

133379
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species: 471312
type: SpeciesReference

494750
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Fe_III_hydroxamate_C9H18O6N3Fe
type: Species

154884
stoichiometry: 1.0
species: 476871
type: SpeciesReference

095856
stoichiometry: 1.0
species: 473672
type: SpeciesReference

086051
stoichiometry: 1.0
species: 473492
type: SpeciesReference

131188
value: -0.122011
type: LocalParameter

210751
units: 017602
value: 0.0
type: LocalParameter

265020
value: 0.0
type: LocalParameter

178908
stoichiometry: 1.0
species: 467992
type: SpeciesReference

528706
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kinetic law: 214272
product: 214222
product: 214247
type: Reaction
reactant: 214210
notes: GENE_ASSOCIATION: ( b0198 and b0199 and b0197 ) PROTEIN_ASSOCIATION: ( MetI and MetN and MetQ ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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fast: false
reactant: 214198
reactant: 214186
name: R_L_methionine_transport_via_ABC_system__periplasm_
product: 214235

038347
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species: 487010
type: SpeciesReference

529646
kinetic law: 220096
fast: false
reversible: false
product: 220084
reactant: 220024
type: Reaction
reactant: 220012
name: R_methanesulfonate_transport_via_ABC_system__periplasm_
product: 220048
reactant: 220036
notes: GENE_ASSOCIATION: ( b0936 and b0933 and b0934 ) PROTEIN_ASSOCIATION: ( SsuA and SsuB and SsuC ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 220072
product: 220060

298438
stoichiometry: 1.0
species: 491170
type: SpeciesReference

184761
stoichiometry: 1.0
species: 479591
type: SpeciesReference

057918
units: 017602
value: 0.0
type: LocalParameter

150933
stoichiometry: 1.0
species: 470692
type: SpeciesReference

130625
stoichiometry: 1.0
species: 497049
type: SpeciesReference

098338
stoichiometry: 1.0
species: 478711
type: SpeciesReference

204161
units: 017602
value: 0.0
type: LocalParameter

146146
units: 017602
value: 0.0
type: LocalParameter

526987
reactant: 198753
product: 198789
fast: false
notes: GENE_ASSOCIATION: b0494 PROTEIN_ASSOCIATION: TesA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.5
type: Reaction
reactant: 198740
name: R_Lysophospholipase_L1__2_acylglycerophosphoglycerol__n_C161___periplasm_
kinetic law: 198801
reversible: false
product: 198777
product: 198765

064729
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type: LocalParameter

043573
stoichiometry: 1.0
species: 487290
type: SpeciesReference

262335
stoichiometry: 1.0
species: 462933
type: SpeciesReference

249000
units: 017602
value: -16.986888
type: LocalParameter

260414
units: 017602
value: 0.0
type: LocalParameter

019901
value: 0.0
type: LocalParameter

276245
stoichiometry: 1.0
species: 487170
type: SpeciesReference

262997
stoichiometry: 1.0
species: 486250
type: SpeciesReference

141606
units: 017602
value: 999999.0
type: LocalParameter

492350
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_L_Xylulose_C5H10O5
type: Species

100070
stoichiometry: 1.0
species: 478711
type: SpeciesReference

136770
units: 017602
value: 0.0
type: LocalParameter

295902
units: 017602
value: 999999.0
type: LocalParameter

197126
value: -0.040632
type: LocalParameter

073544
stoichiometry: 1.0
species: 470812
type: SpeciesReference

076720
stoichiometry: 1.0
species: 466132
type: SpeciesReference

143481
units: 017602
value: 999999.0
type: LocalParameter

160050
stoichiometry: 1.0
species: 476831
type: SpeciesReference

060600
stoichiometry: 1.0
species: 469232
type: SpeciesReference

052665
units: 017602
value: 0.0
type: LocalParameter

514668
kinetic law: 120761
product: 120749
reactant: 120737
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_hepta_acylated_KDO_2__lipid__A__exchange
type: Reaction

305998
units: 017602
value: 0.0
type: LocalParameter

106096
value: -0.021771
type: LocalParameter

157800
units: 017602
value: 999999.0
type: LocalParameter

056591
units: 017602
value: 0.0
type: LocalParameter

196351
stoichiometry: 1.0
species: 478631
type: SpeciesReference

280889
units: 017602
value: 0.0
type: LocalParameter

198692
units: 017602
value: 999999.0
type: LocalParameter

155643
stoichiometry: 1.0
species: 478711
type: SpeciesReference

053308
units: 017602
value: 0.0
type: LocalParameter

170911
stoichiometry: 1.0
species: 483371
type: SpeciesReference

304372
stoichiometry: 1.0
species: 492190
type: SpeciesReference

069099
units: 017602
value: 999999.0
type: LocalParameter

090910
value: 0.0
type: LocalParameter

175637
units: 017602
value: -999999.0
type: LocalParameter

297266
value: 0.0
type: LocalParameter

026055
stoichiometry: 1.0
species: 489690
type: SpeciesReference

145978
stoichiometry: 2.0
species: 478711
type: SpeciesReference

227977
units: 017602
value: 0.0
type: LocalParameter

221457
stoichiometry: 1.0
species: 483291
type: SpeciesReference

163915
units: 017602
value: 999999.0
type: LocalParameter

505789
product: 068105
product: 068117
type: Reaction
name: R_CDP_Diacylglycerol_pyrophostatase__n_C161_
fast: false
product: 068130
reversible: false
reactant: 068081
kinetic law: 068142
notes: GENE_ASSOCIATION: b3918 PROTEIN_ASSOCIATION: Cdh SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.6.1.26
reactant: 068093

070294
units: 017602
value: 0.0
type: LocalParameter

060032
value: 0.0
type: LocalParameter

504809
kinetic law: 061781
product: 061769
product: 061756
reactant: 061744
notes: GENE_ASSOCIATION: b4139 PROTEIN_ASSOCIATION: AspA SUBSYSTEM: S_Alanine_and_Aspartate_Metabolism PROTEIN_CLASS: 4.3.1.1
fast: false
reversible: false
name: R_L_aspartase
type: Reaction

246922
stoichiometry: 1.0
species: 488790
type: SpeciesReference

083145
stoichiometry: 1.0
species: 478711
type: SpeciesReference

191392
value: 0.0
type: LocalParameter

263579
units: 017602
value: 999999.0
type: LocalParameter

521487
product: 164630
product: 164618
reactant: 164594
kinetic law: 164642
type: Reaction
reactant: 164606
notes: GENE_ASSOCIATION: ( b3517 or b1493 ) PROTEIN_ASSOCIATION: ( GadA ) or ( GadB ) SUBSYSTEM: S_Glutamate_Metabolism PROTEIN_CLASS: 4.1.1.15
name: R_Glutamate_Decarboxylase
fast: false
reversible: false

169288
value: -0.066943
type: LocalParameter

212110
value: 0.0
type: LocalParameter

279677
stoichiometry: 1.0
species: 487690
type: SpeciesReference

190835
stoichiometry: 1.0
species: 466872
type: SpeciesReference

483231
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Sodium_Na
type: Species

084525
value: 0.0
type: LocalParameter

248053
units: 017602
value: 0.0
type: LocalParameter

531766
reversible: false
name: R_nitrite_Reductase__Ubiquinole_8__periplasm_
reactant: 234793
fast: false
reactant: 234805
kinetic law: 234865
reactant: 234817
product: 234841
notes: GENE_ASSOCIATION: ( b4070 and b4071 and b4072 and b4073 ) PROTEIN_ASSOCIATION: NrfABCD SUBSYSTEM: S_Nitrogen_Metabolism PROTEIN_CLASS:
product: 234853
type: Reaction
product: 234829

242381
stoichiometry: 1.0
species: 485830
type: SpeciesReference

124905
stoichiometry: 1.0
species: 482531
type: SpeciesReference

111205
value: 0.0
type: LocalParameter

250446
units: 017602
value: 0.0
type: LocalParameter

271766
stoichiometry: 2.0
species: 483951
type: SpeciesReference

297055
stoichiometry: 1.0
species: 491090
type: SpeciesReference

156275
units: 017602
value: 0.0
type: LocalParameter

033802
stoichiometry: 1.0
species: 478591
type: SpeciesReference

243975
stoichiometry: 1.0
species: 489730
type: SpeciesReference

121042
stoichiometry: 1.0
species: 495809
type: SpeciesReference

132823
units: 017602
value: 0.0
type: LocalParameter

193303
stoichiometry: 1.0
species: 476051
type: SpeciesReference

506309
kinetic law: 071396
product: 071384
type: Reaction
reactant: 071334
product: 071358
reactant: 071346
name: R_cardiolipin_hydrolase__periplasm__n_C180_
fast: false
product: 071371
reversible: false
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS:

253336
units: 017602
value: 999999.0
type: LocalParameter

468772
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_aerobactin_minus_Fe3_C22H33N4O13
type: Species

095436
stoichiometry: 1.0
species: 483391
type: SpeciesReference

220998
stoichiometry: 1.0
species: 465812
type: SpeciesReference

048487
stoichiometry: 1.0
species: 467452
type: SpeciesReference

078181
stoichiometry: 1.0
species: 471372
type: SpeciesReference

240244
stoichiometry: 1.0
species: 478711
type: SpeciesReference

166148
value: 0.0
type: LocalParameter

057230
value: 0.0
type: LocalParameter

305755
units: 017602
value: 999999.0
type: LocalParameter

266979
units: 017602
value: 999999.0
type: LocalParameter

027996
units: 017602
value: 999999.0
type: LocalParameter

123538
value: 0.0
type: LocalParameter

501809
product: 043005
product: 042993
reversible: false
reactant: 042969
notes: GENE_ASSOCIATION: b0030 PROTEIN_ASSOCIATION: RihC SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 3.2.2.8
fast: false
name: R_adenosine_hydrolase
kinetic law: 043017
type: Reaction
reactant: 042981

281576
stoichiometry: 2.0
species: 484011
type: SpeciesReference

266280
units: 017602
value: 0.0
type: LocalParameter

089784
units: 017602
value: 999999.0
type: LocalParameter

047243
stoichiometry: 1.0
species: 465632
type: SpeciesReference

148221
units: 017602
value: 0.0
type: LocalParameter

540865
kinetic law: 303740
product: 303728
reactant: 303716
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_xanthine_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

041154
value: 0.0
type: LocalParameter

160266
stoichiometry: 1.0
species: 485830
type: SpeciesReference

062802
units: 017602
value: 0.0
type: LocalParameter

218340
stoichiometry: 1.0
species: 485830
type: SpeciesReference

030319
stoichiometry: 1.0
species: 465632
type: SpeciesReference

224836
stoichiometry: 1.0
species: 472572
type: SpeciesReference

514088
kinetic law: 117952
product: 117940
reactant: 117928
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_gamma_butyrobetaine_exchange
type: Reaction

219515
value: 0.0
type: LocalParameter

520647
product: 159349
reactant: 159301
reversible: false
notes: GENE_ASSOCIATION: b2051 PROTEIN_ASSOCIATION: WcaH SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS:
fast: false
name: R_GDP_mannose_mannosyl_hydrolase
type: Reaction
reactant: 159313
product: 159325
product: 159337
kinetic law: 159361

222192
value: -0.009314
type: LocalParameter

073774
stoichiometry: 2.0
species: 474352
type: SpeciesReference

166714
stoichiometry: 1.0
species: 469232
type: SpeciesReference

017723
units: 017602
value: 0.0
type: LocalParameter

112881
value: -0.175566
type: LocalParameter

197724
stoichiometry: 1.0
species: 478891
type: SpeciesReference

488810
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_D_Tagaturonate_C6H9O7
type: Species

541026
type: Reaction
notes: GENE_ASSOCIATION: ( b3566 and b3567 and b3568 ) PROTEIN_ASSOCIATION: ( XylF and XylG and XylH ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
product: 305223
name: R_D_xylose_transport_via_ABC_system__periplasm_
reactant: 305151
reversible: false
product: 305199
product: 305187
reactant: 305175
kinetic law: 305235
product: 305211
reactant: 305163

151150
stoichiometry: 1.0
species: 473712
type: SpeciesReference

054901
value: 0.0
type: LocalParameter

094615
units: 017602
value: 999999.0
type: LocalParameter

176301
units: 017602
value: -999999.0
type: LocalParameter

128884
stoichiometry: 1.0
species: 496789
type: SpeciesReference

170204
units: 017602
value: 0.0
type: LocalParameter

530127
notes: GENE_ASSOCIATION: b0019 PROTEIN_ASSOCIATION: NhaA SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
reactant: 223972
reversible: false
type: Reaction
product: 223996
reactant: 223984
fast: false
product: 224008
kinetic law: 224020
name: R_sodium_proton_antiporter__HNA_is_2___periplasm_

510528
reactant: 099950
kinetic law: 099998
name: R_enoyl_acyl_carrier_protein_reductase__NADPH___n_C40_
reactant: 099962
reversible: false
type: Reaction
notes: GENE_ASSOCIATION: b1288 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.3.1.10
product: 099974
reactant: 099938
fast: false
product: 099986

112220
stoichiometry: 1.0
species: 494170
type: SpeciesReference

132136
value: 0.0
type: LocalParameter

298210
stoichiometry: 2.0
species: 478751
type: SpeciesReference

067214
units: 017602
value: 0.0
type: LocalParameter

267972
units: 017602
value: 0.0
type: LocalParameter

478411
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Guanine_C5H5N5O
type: Species

096987
units: 017602
value: 0.0
type: LocalParameter

527327
name: R_Lysophospholipase_L2__acyltransferase__2_acyl_glycerophosphoglycerol__n_C120_
kinetic law: 200968
type: Reaction
notes: GENE_ASSOCIATION: b3825 PROTEIN_ASSOCIATION: PldB SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS:
product: 200956
reactant: 200920
reversible: false
fast: false
product: 200944
reactant: 200932

541025
kinetic law: 305079
product: 305067
reactant: 305055
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_xylulose_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

128233
units: 017602
value: 0.0
type: LocalParameter

248683
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species: 465592
type: SpeciesReference

228506
stoichiometry: 1.0
species: 483351
type: SpeciesReference

038131
stoichiometry: 1.0
species: 487010
type: SpeciesReference

262778
stoichiometry: 1.0
species: 485810
type: SpeciesReference

118801
stoichiometry: 1.0
species: 477451
type: SpeciesReference

281130
units: 017602
value: 999999.0
type: LocalParameter

216795
stoichiometry: 2.0
species: 468172
type: SpeciesReference

244145
units: 017602
value: 0.0
type: LocalParameter

526507
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reactant: 195542
product: 195603
notes: GENE_ASSOCIATION: b0914 PROTEIN_ASSOCIATION: MsbA SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
product: 195591
type: Reaction
name: R_lipid__cold__A_transport_via_ABC_system__periplasm_
reactant: 195555
product: 195579
kinetic law: 195616
reactant: 195530
product: 195567
fast: false

236295
units: 017602
value: 0.0
type: LocalParameter

058617
value: -0.088598
type: LocalParameter

023351
stoichiometry: 1.0
species: 462333
type: SpeciesReference

491610
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
type: Species

090704
value: 0.0
type: LocalParameter

213656
units: 017602
value: 0.0
type: LocalParameter

052436
value: 0.0
type: LocalParameter

193520
stoichiometry: 1.0
species: 478711
type: SpeciesReference

517507
reactant: 138028
reactant: 138016
type: Reaction
product: 138088
fast: false
reversible: false
reactant: 138040
kinetic law: 138112
product: 138100
notes: GENE_ASSOCIATION: ( b1805 or b1701 ) PROTEIN_ASSOCIATION: ( FadD ) or ( FadK ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 6.2.1.3
reactant: 138052
product: 138076
product: 138064
name: R_fatty_acid_CoA_ligase__octadecenoate_transport_via_vectoral_Co_A_coupling_

214441
stoichiometry: 2.0
species: 478711
type: SpeciesReference

061165
units: 017602
value: 999999.0
type: LocalParameter

278912
stoichiometry: 1.0
species: 487851
type: SpeciesReference

051293
stoichiometry: 1.0
species: 469232
type: SpeciesReference

235508
units: 017602
value: 0.0
type: LocalParameter

211162
stoichiometry: 1.0
species: 481251
type: SpeciesReference

029107
stoichiometry: 1.0
species: 478711
type: SpeciesReference

117162
stoichiometry: 1.0
species: 495190
type: SpeciesReference

293125
value: 0.0
type: LocalParameter

107698
units: 017602
value: 0.0
type: LocalParameter

229488
stoichiometry: 1.0
species: 480111
type: SpeciesReference

167522
value: 0.0
type: LocalParameter

509048
kinetic law: 090874
product: 090862
product: 090849
reactant: 090837
notes: GENE_ASSOCIATION: s0001 PROTEIN_ASSOCIATION: SPONTANEOUS SUBSYSTEM: S_Methionine_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_4_5_dihydroxy_2_3_pentanedione_cyclization__spontaneous_
type: Reaction

516828
kinetic law: 131224
product: 131212
reactant: 131200
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_tetradecenoate__n_C141__exchange
type: Reaction

215055
stoichiometry: 1.0
species: 485830
type: SpeciesReference

247434
value: 0.0
type: LocalParameter

490690
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Phosphotyrosine_C9H10NO6P
type: Species

155498
value: 0.0
type: LocalParameter

261103
units: 017602
value: 0.0
type: LocalParameter

118667
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type: LocalParameter

294068
units: 017602
value: 0.0
type: LocalParameter

108629
stoichiometry: 1.0
species: 467812
type: SpeciesReference

109343
units: 017602
value: 0.0
type: LocalParameter

249602
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species: 469232
type: SpeciesReference

038952
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value: 0.0
type: LocalParameter

271984
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value: 999999.0
type: LocalParameter

134307
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type: LocalParameter

250228
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species: 478591
type: SpeciesReference

486770
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_psicoselysine_C12H25N2O7
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species: 483351
type: SpeciesReference

197589
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species: 490490
type: SpeciesReference

225367
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221880
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type: LocalParameter

503429
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reversible: false
product: 053003
notes: GENE_ASSOCIATION: b0110 PROTEIN_ASSOCIATION: AmpD SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS:
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reactant: 052979
reactant: 052966
product: 052991
kinetic law: 053015

176010
units: 017602
value: 0.0
type: LocalParameter

491830
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Urea_CH4N2O
type: Species

243756
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type: LocalParameter

468992
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_L_Asparagine_C4H8N2O3
type: Species

161170
value: 0.0
type: LocalParameter

271332
stoichiometry: 1.0
species: 469232
type: SpeciesReference

154401
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value: 0.0
type: LocalParameter

171826
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species: 470172
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224618
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value: -999999.0
type: LocalParameter

045078
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type: LocalParameter

027779
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species: 464252
type: SpeciesReference

063748
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029385
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type: LocalParameter

500429
product: 034887
type: Reaction
reactant: 034863
fast: false
reversible: false
name: R_acetyl_CoAacetoacetyl_CoA_transferase
reactant: 034875
kinetic law: 034911
product: 034899
notes: GENE_ASSOCIATION: ( b2221 and b2222 ) PROTEIN_ASSOCIATION: AtoADec SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:

146773
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species: 474851
type: SpeciesReference

305537
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species: 478591
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196741
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species: 461293
type: SpeciesReference

128052
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value: 999999.0
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257817
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018217
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type: LocalParameter

483011
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
type: Species

505129
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product: 063796
reactant: 063784
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_beta_alanine_transport_via_diffusion__extracellular_to_periplasm_
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217954
value: 0.0
type: LocalParameter

073991
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value: 0.0
type: LocalParameter

132980
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value: 0.0
type: LocalParameter

271560
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species: 487050
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021974
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species: 468052
type: SpeciesReference

175142
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191803
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species: 470692
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227527
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species: 483631
type: SpeciesReference

240027
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type: LocalParameter

055791
units: 017602
value: 0.0
type: LocalParameter

266400
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value: 0.296923
type: LocalParameter

143021
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species: 478591
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112002
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052217
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type: LocalParameter

032620
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type: LocalParameter

128666
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type: LocalParameter

148943
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type: LocalParameter

204383
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value: 999999.0
type: LocalParameter

046508
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type: LocalParameter

494530
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
type: Species

466092
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Acetaldehyde_C2H4O
type: Species

125172
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value: -0.002522
type: LocalParameter

060190
units: 017602
value: 0.0
type: LocalParameter

137595
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species: 486210
type: SpeciesReference

096204
stoichiometry: 1.0
species: 462933
type: SpeciesReference

102517
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species: 480331
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205314
stoichiometry: 1.0
species: 483331
type: SpeciesReference

476391
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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type: Species

239419
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species: 485830
type: SpeciesReference

095001
units: 017602
value: 0.0
type: LocalParameter

083593
units: 017602
value: 999999.0
type: LocalParameter

234042
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species: 478711
type: SpeciesReference

151999
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species: 465632
type: SpeciesReference

480551
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_D_Lactate_C3H5O3
type: Species

030667
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type: LocalParameter

471112
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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type: Species

235725
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species: 468632
type: SpeciesReference

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stoichiometry: 1.0
species: 491270
type: SpeciesReference

510308
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reactant: 098471
product: 098508
notes: GENE_ASSOCIATION: b1288 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.3.1.9
reversible: false
type: Reaction
reactant: 098496
fast: false
reactant: 098484
product: 098520
kinetic law: 098533

177252
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type: LocalParameter

270663
stoichiometry: 1.0
species: 478531
type: SpeciesReference

056169
value: 0.0
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082346
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type: LocalParameter

068457
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value: 0.0
type: LocalParameter

531546
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name: R_Nucleoside_triphosphate_pyrophosphorylase__gtp_
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reactant: 233338
reactant: 233350
product: 233362
product: 233374
product: 233386
type: Reaction
kinetic law: 233398

190594
units: 017602
value: -999999.0
type: LocalParameter

164132
units: 017602
value: -999999.0
type: LocalParameter

479231
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_L_Histidinol_C6H12N3O
type: Species

162818
value: -0.009314
type: LocalParameter

042329
value: 0.0
type: LocalParameter

107241
units: 017602
value: 0.0
type: LocalParameter

138960
units: 017602
value: -999999.0
type: LocalParameter

022120
stoichiometry: 1.0
species: 468052
type: SpeciesReference

212882
value: 0.0
type: LocalParameter

100275
units: 017602
value: 0.0
type: LocalParameter

251825
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species: 485410
type: SpeciesReference

074677
stoichiometry: 1.0
species: 478751
type: SpeciesReference

302026
stoichiometry: 1.0
species: 478711
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272715
units: 017602
value: 999999.0
type: LocalParameter

270179
stoichiometry: 1.0
species: 478391
type: SpeciesReference

091104
units: 017602
value: 999999.0
type: LocalParameter

505569
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reactant: 066636
reversible: true
fast: false
type: Reaction
reactant: 066648
kinetic law: 066684
product: 066672
product: 066660
name: R_cob_I_alamin_adenosyltransferase
notes: GENE_ASSOCIATION: b1270 PROTEIN_ASSOCIATION: BtuR SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.17

243515
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type: LocalParameter

269441
stoichiometry: 1.0
species: 467132
type: SpeciesReference

293862
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type: LocalParameter

539685
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notes: GENE_ASSOCIATION: b0613 PROTEIN_ASSOCIATION: CitG SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
kinetic law: 291281
type: Reaction
fast: false
product: 291268
reactant: 291231
reactant: 291243
name: R_triphosphoribosyl_dephospho_CoA_synthase

299805
units: 017602
value: 0.0
type: LocalParameter

098557
units: 017602
value: 999999.0
type: LocalParameter

077239
stoichiometry: 1.0
species: 471252
type: SpeciesReference

124202
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value: 0.0
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041379
units: 017602
value: 0.0
type: LocalParameter

296750
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type: LocalParameter

062394
stoichiometry: 1.0
species: 469152
type: SpeciesReference

305103
units: 017602
value: 999999.0
type: LocalParameter

221674
stoichiometry: 1.0
species: 468052
type: SpeciesReference

032837
stoichiometry: 1.0
species: 486210
type: SpeciesReference

282209
value: 0.0
type: LocalParameter

166955
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type: LocalParameter

139697
stoichiometry: 1.0
species: 472652
type: SpeciesReference

030173
stoichiometry: 1.0
species: 465632
type: SpeciesReference

523667
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name: R_3_hydroxyacyl_CoA_dehydrogenase__3_oxotetradecanoyl_CoA_
reactant: 178062
type: Reaction
product: 178075
kinetic law: 178111
reactant: 178050
product: 178099
product: 178087
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) PROTEIN_ASSOCIATION: ( FadB ) or ( FadJ ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.35
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136068
stoichiometry: 1.0
species: 478711
type: SpeciesReference

268921
stoichiometry: 1.0
species: 489370
type: SpeciesReference

480991
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_2_3_Bis_3_hydroxytetradecanoyl__beta_D_glucosaminyl_1_phosphate_C34H64NO12P
type: Species

172415
units: 017602
value: 0.0
type: LocalParameter

473552
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
type: Species

151782
units: 017602
value: 0.0
type: LocalParameter

300470
stoichiometry: 2.0
species: 467352
type: SpeciesReference

492130
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Xanthosine_5__phosphate_C10H11N4O9P
type: Species

185866
units: 017602
value: -999999.0
type: LocalParameter

181375
units: 017602
value: 999999.0
type: LocalParameter

075629
units: 017602
value: 0.0
type: LocalParameter

070708
stoichiometry: 1.0
species: 484671
type: SpeciesReference

477031
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_D_Glucarate_C6H8O8
type: Species

195796
units: 017602
value: 0.0
type: LocalParameter

511908
kinetic law: 107385
product: 107373
reactant: 107361
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_N_Acetylneuraminate_exchange
type: Reaction

520867
reactant: 160831
product: 160867
reversible: false
product: 160879
type: Reaction
notes: GENE_ASSOCIATION: ( b0837 or b0124 ) PROTEIN_ASSOCIATION: ( YliI ) or ( Gcd ) SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS:
reactant: 160819
fast: false
kinetic law: 160891
reactant: 160843
name: R_Glucose_dehydrogenase__ubiquinone_8_as_acceptor___periplasm_
product: 160855

028721
stoichiometry: 1.0
species: 478711
type: SpeciesReference

288709
stoichiometry: 1.0
species: 489330
type: SpeciesReference

535126
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kinetic law: 256731
reversible: false
reactant: 256671
product: 256719
product: 256695
type: Reaction
fast: false
reactant: 256683
product: 256707
notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.32

181161
value: 0.0
type: LocalParameter

539686
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reversible: false
reactant: 291354
fast: false
product: 291402
type: Reaction
name: R_thioredoxin_reductase__NADPH_
product: 291390
notes: GENE_ASSOCIATION: ( ( b3781 and ( b0888 and b0888 ) ) or b2582 ) PROTEIN_ASSOCIATION: ( TrxA and TrxB ) or ( TrxB and TrxC ) SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS: 1.8.1.9
reactant: 291378
kinetic law: 291414

154666
units: 017602
value: 0.0
type: LocalParameter

202577
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species: 478591
type: SpeciesReference

480111
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Inosine_C10H12N4O5
type: Species

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species: 465652
type: SpeciesReference

021530
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species: 472352
type: SpeciesReference

288588
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species: 489330
type: SpeciesReference

297483
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species: 491390
type: SpeciesReference

073325
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value: 999999.0
type: LocalParameter

499469
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product: 028612
reactant: 028600
type: Reaction
reversible: false
kinetic law: 028636
reactant: 028588
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notes: GENE_ASSOCIATION: b1093 PROTEIN_ASSOCIATION: FabG SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.1.1.100

260631
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value: 0.0
type: LocalParameter

173098
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037010
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species: 466412
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value: -40.936193
type: LocalParameter

473772
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initial concentration: NaN
initial amount: NaN
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value: 999999.0
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142246
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species: 474511
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initial concentration: NaN
initial amount: NaN
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value: -0.020902
type: LocalParameter

122163
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094057
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species: 472792
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267282
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species: 477311
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188678
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251181
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196969
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515008
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product: 122403
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_D_lactate_exchange
type: Reaction

185444
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value: -999999.0
type: LocalParameter

053524
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value: 999999.0
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052882
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species: 478591
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284597
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value: -999999.0
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185287
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species: 478591
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210530
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value: 0.0
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476991
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initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_D_Glucarate_C6H8O8
type: Species

110549
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type: LocalParameter

102841
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type: LocalParameter

051864
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127281
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value: 999999.0
type: LocalParameter

175854
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species: 477991
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288174
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species: 490170
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209282
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species: 486150
type: SpeciesReference

186218
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115405
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species: 474791
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021746
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165798
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species: 478591
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189191
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species: 480151
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036083
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species: 485990
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species: 487330
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277495
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species: 467432
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258481
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287994
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049416
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species: 467612
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292343
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species: 487010
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250663
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502189
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notes: GENE_ASSOCIATION: b0110 PROTEIN_ASSOCIATION: AmpD SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS:
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product: 045371
reactant: 045346
type: Reaction
reversible: false
fast: false
kinetic law: 045383

248234
stoichiometry: 1.0
species: 476371
type: SpeciesReference

479671
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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154872
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species: 478591
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095868
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species: 473692
type: SpeciesReference

166510
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species: 477491
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species: 470372
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133367
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species: 470712
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531986
kinetic law: 236247
fast: false
product: 236235
reactant: 236199
name: R_glucosyltransferase_II__LPS_O16_antigen_biosynthesis_
type: Reaction
product: 236211
product: 236223
reactant: 236187
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
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465452
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_5_Methylthioadenosine_C11H15N5O3S
type: Species

088930
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species: 487830
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042341
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value: 1.808259
type: LocalParameter

210763
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value: 999999.0
type: LocalParameter

487710
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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190303
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species: 467132
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150945
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species: 478711
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256875
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038335
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species: 466572
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159193
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species: 468052
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298426
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species: 467432
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043585
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species: 467072
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145530
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085712
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232670
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species: 478351
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510748
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product: 101337
product: 101325
reactant: 101313
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) PROTEIN_ASSOCIATION: ( FadB ) or ( FadJ ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 4.2.1.17
fast: false
reversible: true
name: R_3_hydroxyacyl_CoA_dehydratase__3_hydroxybutanoyl_CoA_
type: Reaction

146158
units: 017602
value: 999999.0
type: LocalParameter

139467
stoichiometry: 1.0
species: 474331
type: SpeciesReference

098326
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type: LocalParameter

218123
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species: 482551
type: SpeciesReference

042811
units: 017602
value: 0.0
type: LocalParameter

187745
units: 017602
value: 0.0
type: LocalParameter

204173
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type: LocalParameter

234029
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species: 473652
type: SpeciesReference

038515
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type: LocalParameter

149605
units: 017602
value: 0.0
type: LocalParameter

137317
units: 017602
value: 0.0
type: LocalParameter

031250
units: 017602
value: 999999.0
type: LocalParameter

487470
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_L_Rhamnose_C6H12O5
type: Species

184060
stoichiometry: 1.0
species: 478711
type: SpeciesReference

275738
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type: LocalParameter

161874
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species: 478711
type: SpeciesReference

149195
stoichiometry: 1.0
species: 469232
type: SpeciesReference

271548
stoichiometry: 1.0
species: 478751
type: SpeciesReference

073010
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species: 470712
type: SpeciesReference

272921
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species: 473072
type: SpeciesReference

236006
units: 017602
value: 999999.0
type: LocalParameter

097926
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type: LocalParameter

176738
value: 0.0
type: LocalParameter

499489
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notes: GENE_ASSOCIATION: b1093 PROTEIN_ASSOCIATION: FabG SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.1.1.100
reactant: 028709
product: 028759
kinetic law: 028771
reversible: true
name: R_3_oxoacyl_acyl_carrier_protein_reductase__n_C40_
type: Reaction
reactant: 028733
product: 028746
reactant: 028721

304384
stoichiometry: 1.0
species: 492210
type: SpeciesReference

280877
value: 0.0
type: LocalParameter

539666
kinetic law: 291159
product: 291147
reactant: 291135
notes: GENE_ASSOCIATION: b3919 PROTEIN_ASSOCIATION: Tpi SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 5.3.1.1
fast: false
reversible: true
name: R_triose_phosphate_isomerase
type: Reaction

155631
stoichiometry: 1.0
species: 483331
type: SpeciesReference

280198
stoichiometry: 1.0
species: 488010
type: SpeciesReference

297278
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species: 491230
type: SpeciesReference

535986
kinetic law: 262166
type: Reaction
reversible: true
product: 262142
fast: false
reactant: 262116
product: 262154
notes: GENE_ASSOCIATION: b2501 PROTEIN_ASSOCIATION: Ppk SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS: 2.7.4.1
name: R_polyphosphate_kinase
reactant: 262129

090922
units: 017602
value: 3.56E-4
type: LocalParameter

272702
units: 017602
value: -999999.0
type: LocalParameter

163927
value: 0.0
type: LocalParameter

060044
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value: 0.192568
type: LocalParameter

145966
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species: 474871
type: SpeciesReference

227965
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type: LocalParameter

221445
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type: LocalParameter

059326
units: 017602
value: 0.0
type: LocalParameter

469352
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Butanoyl_CoA_C25H38N7O17P3S
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138088
stoichiometry: 1.0
species: 484411
type: SpeciesReference

246910
stoichiometry: 1.0
species: 478711
type: SpeciesReference

234490
value: 0.0
type: LocalParameter

508508
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product: 087466
reactant: 087441
name: R_3_deoxy_D_arabino_heptulosonate_7_phosphate_synthetase
reactant: 087429
product: 087454
notes: GENE_ASSOCIATION: ( b2601 or b0754 or b1704 ) PROTEIN_ASSOCIATION: ( AroF ) or ( AroGec ) or ( AroH ) SUBSYSTEM: S_Tyrosine__Tryptophan__and_Phenylalanine_Metabolism PROTEIN_CLASS: 4.1.2.15
reversible: false
fast: false
type: Reaction
reactant: 087417

083157
stoichiometry: 1.0
species: 484691
type: SpeciesReference

177990
units: 017602
value: 0.0
type: LocalParameter

030306
stoichiometry: 1.0
species: 464312
type: SpeciesReference

276257
stoichiometry: 1.0
species: 487510
type: SpeciesReference

250891
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value: 0.0
type: LocalParameter

197138
stoichiometry: 1.0
species: 461333
type: SpeciesReference

470172
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Choline_C5H14NO
type: Species

262347
stoichiometry: 1.0
species: 462953
type: SpeciesReference

115612
stoichiometry: 1.0
species: 494870
type: SpeciesReference

260426
value: -0.012807
type: LocalParameter

471812
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Deoxyadenosine_C10H13N5O3
type: Species

460513
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_1_2_Diacyl_sn_glycerol__dihexadecanoyl__n_C160__C35H68O5
type: Species

301401
value: -0.102219
type: LocalParameter

295914
value: 0.0
type: LocalParameter

522427
kinetic law: 170398
product: 170386
product: 170374
reactant: 170362
notes: GENE_ASSOCIATION: b2053 PROTEIN_ASSOCIATION: Gmd SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 4.2.1.47
fast: false
reversible: false
name: R_GDP_D_mannose_dehydratase
type: Reaction

262985
stoichiometry: 3.0
species: 475391
type: SpeciesReference

035671
stoichiometry: 1.0
species: 466112
type: SpeciesReference

141618
value: 0.0
type: LocalParameter

261392
stoichiometry: 1.0
species: 478711
type: SpeciesReference

190159
value: 0.0
type: LocalParameter

160062
stoichiometry: 1.0
species: 478591
type: SpeciesReference

539665
kinetic law: 291061
reactant: 291013
fast: false
reactant: 291001
reversible: false
product: 291037
notes: GENE_ASSOCIATION: b3993 PROTEIN_ASSOCIATION: ThiE SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.3
name: R_thiamine_phosphate_diphosphorylase
type: Reaction
reactant: 291025
product: 291049

266762
units: 017602
value: 0.0
type: LocalParameter

076732
stoichiometry: 1.0
species: 478591
type: SpeciesReference

265033
units: 017602
value: 0.0
type: LocalParameter

153903
units: 017602
value: -999999.0
type: LocalParameter

106084
units: 017602
value: 0.0
type: LocalParameter

255520
stoichiometry: 1.0
species: 478951
type: SpeciesReference

037998
stoichiometry: 1.0
species: 491210
type: SpeciesReference

048499
stoichiometry: 1.0
species: 467472
type: SpeciesReference

485271
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Phosphatidylglycerol__ditetradec_7_enoyl__n_C141__C34H62O10P1
type: Species

224823
stoichiometry: 1.0
species: 467132
type: SpeciesReference

481611
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Maltotetraose_C24H42O21
type: Species

144588
value: 0.0
type: LocalParameter

153271
stoichiometry: 1.0
species: 485830
type: SpeciesReference

253348
value: 0.0
type: LocalParameter

531566
name: R_Nucleoside_triphosphate_pyrophosphorylase__dctp_
product: 233507
product: 233519
product: 233495
notes: GENE_ASSOCIATION: ( b2781 or b2251 or b1759 ) PROTEIN_ASSOCIATION: ( MazG ) or ( YfaO ) or ( NudG ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS:
type: Reaction
reactant: 233470
kinetic law: 233531
reversible: false
reactant: 233483
fast: false

123526
units: 017602
value: 0.0
type: LocalParameter

132836
value: -0.142152
type: LocalParameter

175155
units: 017602
value: 999999.0
type: LocalParameter

263360
value: 0.0
type: LocalParameter

240256
stoichiometry: 1.0
species: 483351
type: SpeciesReference

215286
units: 017602
value: 0.0
type: LocalParameter

194080
stoichiometry: 1.0
species: 483351
type: SpeciesReference

041166
units: 017602
value: 0.0
type: LocalParameter

047255
stoichiometry: 1.0
species: 484851
type: SpeciesReference

464212
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_3_Methyl_2_oxobutanoate_C5H7O3
type: Species

155040
units: 017602
value: 0.0
type: LocalParameter

490010
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_tRNA_Ile__R
type: Species

120507
value: 0.0
type: LocalParameter

089772
units: 017602
value: 0.0
type: LocalParameter

281564
stoichiometry: 2.0
species: 478711
type: SpeciesReference

148233
units: 017602
value: 999999.0
type: LocalParameter

108857
units: 017602
value: 0.0
type: LocalParameter

510328
kinetic law: 098665
reactant: 098617
type: Reaction
fast: false
product: 098641
product: 098653
name: R_enoyl_acyl_carrier_protein_reductase__NADPH___n_C141_
reactant: 098629
reversible: false
notes: GENE_ASSOCIATION: b1288 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.3.1.10
reactant: 098605

084537
units: 017602
value: 0.296304
type: LocalParameter

190847
stoichiometry: 1.0
species: 470632
type: SpeciesReference

279665
stoichiometry: 1.0
species: 474352
type: SpeciesReference

050618
stoichiometry: 1.0
species: 484891
type: SpeciesReference

539046
product: 283468
type: Reaction
reactant: 283420
kinetic law: 283504
product: 283456
reactant: 283432
name: R_sulfoacetate_transport_via_ABC_system__periplasm_
reactant: 283444
fast: false
product: 283492
notes: GENE_ASSOCIATION: ( b0936 and b0933 and b0934 ) PROTEIN_ASSOCIATION: ( SsuA and SsuB and SsuC ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 283480
reversible: false

522867
kinetic law: 173304
type: Reaction
product: 173292
reactant: 173267
fast: false
notes: GENE_ASSOCIATION: ( b3610 or b0849 or b1654 or b1064 ) PROTEIN_ASSOCIATION: ( GrxC ) or ( GrxA ) or ( GrxD ) or ( GrxB ) SUBSYSTEM: S_Unassigned PROTEIN_CLASS: 1.8.4.2
name: R_glutaredoxin_reductase
product: 173280
reactant: 173255
reversible: false

287340
value: 0.0
type: LocalParameter

297042
stoichiometry: 1.0
species: 478631
type: SpeciesReference

539045
kinetic law: 283347
reactant: 283299
notes: GENE_ASSOCIATION: ( b2417 and b2429 and b2415 and b2416 ) PROTEIN_ASSOCIATION: ( Crr and MurP and PtsH and PtsI ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 283335
reversible: false
type: Reaction
product: 283323
name: R_sucrose_transport_via_PEPPyr___periplasm_
reactant: 283311
fast: false

061696
units: 017602
value: 999999.0
type: LocalParameter

124917
stoichiometry: 1.0
species: 496210
type: SpeciesReference

133895
stoichiometry: 5.5E-5
species: 491070
type: SpeciesReference

248065
value: 0.0
type: LocalParameter

485270
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Phosphatidylglycerol__ditetradecanoyl__n_C140__C34H66O10P1
type: Species

156287
value: 0.0
type: LocalParameter

250434
value: 0.0
type: LocalParameter

524187
kinetic law: 181349
product: 181336
reactant: 181323
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_mercury__Hg2__transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

521807
product: 166630
reactant: 166594
reactant: 166606
name: R_glycine_C_acetyltransferase
reversible: true
product: 166618
fast: false
type: Reaction
kinetic law: 166642
notes: GENE_ASSOCIATION: b3617 PROTEIN_ASSOCIATION: Kbl SUBSYSTEM: S_Glycine_and_Serine_Metabolism PROTEIN_CLASS: 2.3.1.29

121030
stoichiometry: 1.0
species: 479091
type: SpeciesReference

042606
stoichiometry: 1.0
species: 467992
type: SpeciesReference

096288
value: 0.0
type: LocalParameter

052448
units: 017602
value: 0.0
type: LocalParameter

293138
units: 017602
value: 0.0
type: LocalParameter

271779
stoichiometry: 1.0
species: 487090
type: SpeciesReference

213644
value: 0.0
type: LocalParameter

465892
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Aminoacetone_C3H8NO
type: Species

477471
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Glycine_C2H5NO2
type: Species

288721
stoichiometry: 1.0
species: 483211
type: SpeciesReference

300458
stoichiometry: 1.0
species: 491670
type: SpeciesReference

107470
stoichiometry: 1.0
species: 493190
type: SpeciesReference

023363
stoichiometry: 1.0
species: 469232
type: SpeciesReference

061153
units: 017602
value: -999999.0
type: LocalParameter

051281
stoichiometry: 1.0
species: 467792
type: SpeciesReference

194298
value: 0.0
type: LocalParameter

211174
stoichiometry: 1.0
species: 487070
type: SpeciesReference

029119
stoichiometry: 1.0
species: 481171
type: SpeciesReference

058604
units: 017602
value: 0.0
type: LocalParameter

117150
stoichiometry: 1.0
species: 476031
type: SpeciesReference

052033
units: 017602
value: -999999.0
type: LocalParameter

167534
units: 017602
value: 0.0
type: LocalParameter

030873
stoichiometry: 1.0
species: 465752
type: SpeciesReference

473112
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Dimethyl_sulfide_C2H6S
type: Species

027791
stoichiometry: 1.0
species: 478711
type: SpeciesReference

229476
stoichiometry: 1.0
species: 479931
type: SpeciesReference

238356
units: 017602
value: 0.0
type: LocalParameter

197712
stoichiometry: 1.0
species: 478751
type: SpeciesReference

219503
units: 017602
value: 0.002522
type: LocalParameter

233252
stoichiometry: 1.0
species: 492090
type: SpeciesReference

222180
units: 017602
value: 0.0
type: LocalParameter

073762
stoichiometry: 1.0
species: 474271
type: SpeciesReference

017711
value: 0.0
type: LocalParameter

094627
value: 0.0
type: LocalParameter

170216
units: 017602
value: 999999.0
type: LocalParameter

176313
units: 017602
value: 999999.0
type: LocalParameter

026272
stoichiometry: 1.0
species: 478591
type: SpeciesReference

540266
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fast: false
reactant: 298414
product: 298438
name: R_UDP_4___ketopentoseUDP_4_amino_4_deoxy_L_arabinose_aminotransferase
kinetic law: 298450
product: 298426
type: Reaction
notes: GENE_ASSOCIATION: b2253 PROTEIN_ASSOCIATION: ArnB SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
reactant: 298402

054913
stoichiometry: 1.0
species: 468212
type: SpeciesReference

267984
value: 0.0
type: LocalParameter

096999
units: 017602
value: 0.0
type: LocalParameter

166727
stoichiometry: 1.0
species: 478591
type: SpeciesReference

132124
units: 017602
value: 999999.0
type: LocalParameter

067202
value: 0.0
type: LocalParameter

490670
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Phosphotyrosine_C9H10NO6P
type: Species

262766
stoichiometry: 1.0
species: 478591
type: SpeciesReference

269429
stoichiometry: 1.0
species: 486891
type: SpeciesReference

281142
value: 0.0
type: LocalParameter

540265
kinetic law: 298330
product: 298318
reactant: 298306
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_UDPglucose_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

216783
stoichiometry: 1.0
species: 482891
type: SpeciesReference

228518
stoichiometry: 2.0
species: 483751
type: SpeciesReference

305768
value: 0.0
type: LocalParameter

248671
value: 0.0
type: LocalParameter

171838
stoichiometry: 1.0
species: 477651
type: SpeciesReference

505349
kinetic law: 065267
product: 065255
reactant: 065243
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_Butyrate_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

045066
units: 017602
value: 0.0
type: LocalParameter

490890
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
type: Species

271320
stoichiometry: 1.0
species: 485211
type: SpeciesReference

518067
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fast: false
reversible: false
product: 142913
name: R_Fe_III_hydroxamate_unloaded_secretion__extracellular_
reactant: 142889
type: Reaction
product: 142925
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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245389
stoichiometry: 1.0
species: 478711
type: SpeciesReference

205301
stoichiometry: 1.0
species: 482571
type: SpeciesReference

146761
stoichiometry: 1.0
species: 474891
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029397
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species: 469892
type: SpeciesReference

186800
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species: 478711
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305549
stoichiometry: 1.0
species: 492410
type: SpeciesReference

289647
stoichiometry: 1.0
species: 482711
type: SpeciesReference

133679
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species: 483331
type: SpeciesReference

201900
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species: 462053
type: SpeciesReference

128040
units: 017602
value: 0.0
type: LocalParameter

018229
stoichiometry: 1.0
species: 460633
type: SpeciesReference

118679
units: 017602
value: 0.0
type: LocalParameter

038964
value: 1.16E-4
type: LocalParameter

249614
stoichiometry: 1.0
species: 478591
type: SpeciesReference

473332
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_periplasmic_protein_disulfide_isomerase_I__reduced__XH2
type: Species

510548
kinetic law: 100130
type: Reaction
notes: GENE_ASSOCIATION: b1288 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.3.1.9
reactant: 100082
product: 100118
reactant: 100094
reactant: 100070
fast: false
reversible: false
product: 100106
name: R_enoyl_acyl_carrier_protein_reductase__NADH___n_C60_

247446
stoichiometry: 1.0
species: 469232
type: SpeciesReference

086268
stoichiometry: 1.0
species: 472212
type: SpeciesReference

225379
stoichiometry: 1.0
species: 483471
type: SpeciesReference

256429
stoichiometry: 1.0
species: 462473
type: SpeciesReference

271996
value: 0.0
type: LocalParameter

134319
units: 017602
value: 0.0
type: LocalParameter

224130
stoichiometry: 1.0
species: 483251
type: SpeciesReference

486090
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Propanal_C3H6O
type: Species

250216
value: -0.042611
type: LocalParameter

514228
kinetic law: 118630
product: 118618
reactant: 118605
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Glutamine_exchange
type: Reaction

530147
kinetic law: 224239
product: 224227
reactant: 224215
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_sodium_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

221892
units: 017602
value: 0.0
type: LocalParameter

251399
value: 0.0
type: LocalParameter

243768
units: 017602
value: 0.0
type: LocalParameter

100058
value: -0.003027
type: LocalParameter

176022
units: 017602
value: 999999.0
type: LocalParameter

069691
stoichiometry: 1.0
species: 470212
type: SpeciesReference

175589
value: -0.027941
type: LocalParameter

030655
units: 017602
value: 999999.0
type: LocalParameter

530146
kinetic law: 224142
reactant: 224105
product: 224117
fast: false
reactant: 224093
reversible: false
product: 224130
name: R_sodium_transport_out_via_proton_antiport__cytoplasm_to_periplasm_
notes: GENE_ASSOCIATION: ( b0842 or b1216 ) PROTEIN_ASSOCIATION: ( MdfA ) or ( ChaA ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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045781
value: 0.0
type: LocalParameter

026491
stoichiometry: 1.0
species: 489670
type: SpeciesReference

229258
stoichiometry: 1.0
species: 492170
type: SpeciesReference

083581
units: 017602
value: 0.0
type: LocalParameter

177264
units: 017602
value: -0.001959
type: LocalParameter

068445
value: 0.0
type: LocalParameter

082358
stoichiometry: 1.0
species: 467552
type: SpeciesReference

235713
stoichiometry: 1.0
species: 487230
type: SpeciesReference

266268
value: 0.0
type: LocalParameter

162806
units: 017602
value: 0.0
type: LocalParameter

275000
stoichiometry: 1.0
species: 478591
type: SpeciesReference

504189
reactant: 057748
reactant: 057736
product: 057772
name: R_Arginineagmatine_antiport__periplasm_
fast: false
reversible: true
product: 057760
type: Reaction
notes: GENE_ASSOCIATION: b4115 PROTEIN_ASSOCIATION: AdiC SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
kinetic law: 057784

107253
value: -0.049363
type: LocalParameter

270650
stoichiometry: 1.0
species: 486910
type: SpeciesReference

515608
kinetic law: 125317
product: 125305
reactant: 125293
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Nitrous_oxide_exchange
type: Reaction

212894
stoichiometry: 1.0
species: 478531
type: SpeciesReference

138972
units: 017602
value: 999999.0
type: LocalParameter

028939
value: 0.0
type: LocalParameter

070001
stoichiometry: 1.0
species: 464972
type: SpeciesReference

149461
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species: 475231
type: SpeciesReference

132992
units: 017602
value: 999999.0
type: LocalParameter

217942
units: 017602
value: 999999.0
type: LocalParameter

035068
units: 017602
value: 0.0
type: LocalParameter

226588
units: 017602
value: 999999.0
type: LocalParameter

089988
stoichiometry: 1.0
species: 465532
type: SpeciesReference

052229
units: 017602
value: 0.0
type: LocalParameter

296979
units: 017602
value: 0.0
type: LocalParameter

266412
value: 0.0
type: LocalParameter

240039
units: 017602
value: 0.0
type: LocalParameter

181388
value: 0.0
type: LocalParameter

021180
value: 0.0
type: LocalParameter

123949
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species: 496110
type: SpeciesReference

021962
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species: 478851
type: SpeciesReference

153495
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species: 467132
type: SpeciesReference

080278
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value: 0.122939
type: LocalParameter

025690
value: 0.0
type: LocalParameter

230409
units: 017602
value: 0.0
type: LocalParameter

032632
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species: 465632
type: SpeciesReference

129561
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species: 496870
type: SpeciesReference

148955
units: 017602
value: 0.0
type: LocalParameter

128678
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species: 487470
type: SpeciesReference

204395
value: 0.0
type: LocalParameter

258688
stoichiometry: 1.0
species: 485231
type: SpeciesReference

302507
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species: 491530
type: SpeciesReference

102505
value: 0.0
type: LocalParameter

056156
units: 017602
value: 0.0
type: LocalParameter

155209
stoichiometry: 1.0
species: 478631
type: SpeciesReference

125184
value: 0.0
type: LocalParameter

526367
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fast: false
name: R_D_lactate_dehydrogenase
type: Reaction
notes: GENE_ASSOCIATION: b2133 PROTEIN_ASSOCIATION: Dld SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS: 1.1.2.4
product: 194696
reactant: 194671
reactant: 194659
product: 194683
reversible: false

031898
units: 017602
value: 0.0
type: LocalParameter

166943
units: 017602
value: 999999.0
type: LocalParameter

030185
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species: 470632
type: SpeciesReference

139685
stoichiometry: 1.0
species: 474312
type: SpeciesReference

172403
units: 017602
value: 0.0
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296763
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value: 0.022188
type: LocalParameter

509488
kinetic law: 093550
product: 093538
reactant: 093526
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: false
name: R_Sink_needed_to_allow_5__deoxyribose_to_leave_system
type: Reaction

497409
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Urea_CH4N2O
type: Species

185878
units: 017602
value: 999999.0
type: LocalParameter

462113
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C141__C19H38NO7P1
type: Species

196339
stoichiometry: 1.0
species: 461213
type: SpeciesReference

294515
units: 017602
value: -999999.0
type: LocalParameter

151794
units: 017602
value: 999999.0
type: LocalParameter

053320
value: -0.091508
type: LocalParameter

075617
units: 017602
value: 0.0
type: LocalParameter

202565
stoichiometry: 1.0
species: 462253
type: SpeciesReference

465032
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_4_Hydroxy_L_threonine_C4H9NO4
type: Species

214429
value: 0.0
type: LocalParameter

302038
stoichiometry: 1.0
species: 491530
type: SpeciesReference

074689
stoichiometry: 1.0
species: 478711
type: SpeciesReference

501109
type: Reaction
product: 038892
reversible: true
fast: false
kinetic law: 038904
product: 038879
reactant: 038855
notes: GENE_ASSOCIATION: b0221 PROTEIN_ASSOCIATION: FadE SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.3.99.2
name: R_acyl_CoA_dehydrogenase__butanoyl_CoA_
reactant: 038867

065194
units: 017602
value: 999999.0
type: LocalParameter

510968
type: Reaction
fast: false
kinetic law: 102565
reactant: 102529
product: 102553
reversible: false
notes: GENE_ASSOCIATION: b1855 PROTEIN_ASSOCIATION: MsbB SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
name: R_Endotoxin_Synthesis__myristoyl_transferase_
product: 102541
reactant: 102517

100287
units: 017602
value: 999999.0
type: LocalParameter

078398
units: 017602
value: 0.0
type: LocalParameter

504669
product: 060865
reactant: 060853
product: 060877
kinetic law: 060889
name: R_aspartate_1_decarboxylase
fast: false
reactant: 060841
reversible: false
type: Reaction
notes: GENE_ASSOCIATION: b0131 PROTEIN_ASSOCIATION: PanD SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 4.1.1.11

506948
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name: R_cytosine_transport_in_via_proton_symport__periplasm_
reactant: 077009
product: 077021
reactant: 076997
notes: GENE_ASSOCIATION: b0336 PROTEIN_ASSOCIATION: CodB SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
kinetic law: 077045
type: Reaction
fast: false
product: 077033

243527
units: 017602
value: 0.0
type: LocalParameter

293850
units: 017602
value: 999999.0
type: LocalParameter

500909
reversible: false
reactant: 037733
fast: false
name: R_acetolactate_synthase
kinetic law: 037769
reactant: 037721
type: Reaction
notes: GENE_ASSOCIATION: ( ( b0077 and b0078 ) or ( b3670 and b3671 ) ) PROTEIN_ASSOCIATION: ( IlvH ) or ( IlvB ) SUBSYSTEM: S_Valine__Leucine__and_Isoleucine_Metabolism PROTEIN_CLASS: 4.1.3.18
product: 037745
product: 037757

038119
stoichiometry: 1.0
species: 466552
type: SpeciesReference

091116
value: 0.0
type: LocalParameter

200956
stoichiometry: 1.0
species: 475651
type: SpeciesReference

499069
kinetic law: 026067
product: 026055
product: 026043
reactant: 026031
notes: GENE_ASSOCIATION: ( b0954 or b0180 ) PROTEIN_ASSOCIATION: ( FabA ) or ( FabZ ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 4.2.1.61
fast: false
reversible: false
name: R_3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C180_
type: Reaction

077227
stoichiometry: 1.0
species: 470692
type: SpeciesReference

232891
units: 017602
value: 999999.0
type: LocalParameter

111640
stoichiometry: 1.0
species: 494050
type: SpeciesReference

098545
units: 017602
value: 0.0
type: LocalParameter

251812
stoichiometry: 1.0
species: 485630
type: SpeciesReference

497989
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product: 019841
notes: GENE_ASSOCIATION: b4213 PROTEIN_ASSOCIATION: CpdB SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.4.16
kinetic law: 019865
product: 019853
reversible: false
reactant: 019829
reactant: 019817
type: Reaction
name: R_2__3__cyclic_nucleotide_phosphodiesterase__AMP___periplasm_

539886
product: 293778
reversible: false
kinetic law: 293826
product: 293802
fast: false
reactant: 293742
reactant: 293766
product: 293790
reactant: 293754
product: 293814
notes: GENE_ASSOCIATION: ( b0763 and b0764 and b0765 ) PROTEIN_ASSOCIATION: ( ModA and ModB and ModC ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
type: Reaction
name: R_tungstate_transport_via_ABC_system__periplasm_

506949
kinetic law: 077142
product: 077130
reactant: 077117
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_cytosine_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

537586
reversible: false
reactant: 272176
notes: GENE_ASSOCIATION: b4094 PROTEIN_ASSOCIATION: PhnN SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
fast: false
type: Reaction
name: R_ribose_1_5_bisphosphokinase
reactant: 272164
kinetic law: 272212
product: 272188
product: 272200

221662
stoichiometry: 1.0
species: 483331
type: SpeciesReference

254142
units: 017602
value: 0.0
type: LocalParameter

535266
reactant: 257613
notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.4
reversible: false
reactant: 257625
product: 257649
product: 257637
fast: false
product: 257661
name: R_Phospholipase_A2__phosphatidate__n_C181___periplasm_
type: Reaction
kinetic law: 257673

022565
units: 017602
value: 0.0
type: LocalParameter

175842
stoichiometry: 1.0
species: 486630
type: SpeciesReference

210542
units: 017602
value: 999999.0
type: LocalParameter

188461
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species: 480091
type: SpeciesReference

051852
units: 017602
value: 999999.0
type: LocalParameter

185275
value: -0.065662
type: LocalParameter

127293
value: 0.0
type: LocalParameter

036071
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species: 470692
type: SpeciesReference

128449
value: 0.0
type: LocalParameter

277483
value: 0.0
type: LocalParameter

474711
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Ferrichrome_minus_Fe_III__C27H42N9O12
type: Species

529666
kinetic law: 220193
product: 220181
reactant: 220168
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_methanesulfonate_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

304167
stoichiometry: 1.0
species: 492010
type: SpeciesReference

293561
stoichiometry: 1.0
species: 490430
type: SpeciesReference

288162
stoichiometry: 1.0
species: 489290
type: SpeciesReference

209294
stoichiometry: 1.0
species: 463153
type: SpeciesReference

021758
value: 0.0
type: LocalParameter

539885
kinetic law: 293670
product: 293658
reactant: 293646
notes: GENE_ASSOCIATION: b2344 PROTEIN_ASSOCIATION: FadL SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
fast: false
reversible: false
name: R_Tetradecenoate_transport_via_facilitated_irreversible_diffusion__extracellular_to_periplasm_
type: Reaction

101133
stoichiometry: 1.0
species: 491090
type: SpeciesReference

165786
stoichiometry: 1.0
species: 469232
type: SpeciesReference

472632
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Dihydroxyacetone_C3H6O3
type: Species

164495
stoichiometry: 1.0
species: 478711
type: SpeciesReference

250675
value: 0.0
type: LocalParameter

494310
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Deoxyguanosine_C10H13N5O4
type: Species

498649
product: 023545
notes: GENE_ASSOCIATION: b2836 PROTEIN_ASSOCIATION: Aas SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.3.1.40
reactant: 023508
kinetic law: 023569
product: 023533
reversible: false
fast: false
reactant: 023521
reactant: 023496
name: R_2_acyl_glycerophospho_glycerol_acyltransferase__n_C141_
type: Reaction
product: 023557

049404
stoichiometry: 1.0
species: 467432
type: SpeciesReference

240861
stoichiometry: 1.0
species: 484751
type: SpeciesReference

021542
stoichiometry: 1.0
species: 468052
type: SpeciesReference

119321
units: 017602
value: 0.0
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288576
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species: 478751
type: SpeciesReference

200261
units: 017602
value: 999999.0
type: LocalParameter

121482
value: 0.0
type: LocalParameter

168331
stoichiometry: 1.0
species: 477411
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242598
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species: 484731
type: SpeciesReference

058472
value: 0.0
type: LocalParameter

142234
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species: 478711
type: SpeciesReference

031686
stoichiometry: 1.0
species: 465692
type: SpeciesReference

260643
units: 017602
value: 999999.0
type: LocalParameter

278429
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species: 487890
type: SpeciesReference

037022
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species: 466352
type: SpeciesReference

248247
stoichiometry: 1.0
species: 476391
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254579
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species: 484831
type: SpeciesReference

073338
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267270
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species: 464652
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067961
stoichiometry: 1.0
species: 478591
type: SpeciesReference

196957
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value: 999999.0
type: LocalParameter

301833
value: 0.0
type: LocalParameter

122151
units: 017602
value: 999999.0
type: LocalParameter

111494
value: 0.0
type: LocalParameter

094069
stoichiometry: 1.0
species: 478711
type: SpeciesReference

052870
stoichiometry: 1.0
species: 462733
type: SpeciesReference

059109
value: 0.0
type: LocalParameter

053536
value: 0.0
type: LocalParameter

262973
value: -0.027941
type: LocalParameter

069667
value: -0.002328
type: LocalParameter

277909
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species: 478711
type: SpeciesReference

261380
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species: 485211
type: SpeciesReference

073568
units: 017602
value: 0.0
type: LocalParameter

262311
units: 017602
value: -3.56E-4
type: LocalParameter

301413
stoichiometry: 1.0
species: 491810
type: SpeciesReference

265046
value: -0.003027
type: LocalParameter

115648
units: 017602
value: 999999.0
type: LocalParameter

531746
reversible: false
type: Reaction
reactant: 234661
product: 234685
kinetic law: 234721
reactant: 234673
reactant: 234648
name: R_nitrite_Reductase__NADH_
product: 234709
fast: false
notes: GENE_ASSOCIATION: ( b3365 and b3366 ) PROTEIN_ASSOCIATION: NirBD SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS:
product: 234697

108111
value: 0.0
type: LocalParameter

242369
stoichiometry: 1.0
species: 460413
type: SpeciesReference

058893
value: 0.0
type: LocalParameter

052689
value: 0.0
type: LocalParameter

305974
stoichiometry: 1.0
species: 492410
type: SpeciesReference

266774
value: 0.0
type: LocalParameter

525147
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product: 187161
fast: false
reversible: true
kinetic law: 187173
notes: GENE_ASSOCIATION: b3770 PROTEIN_ASSOCIATION: IlvE SUBSYSTEM: S_Valine__Leucine__and_Isoleucine_Metabolism PROTEIN_CLASS: 2.6.1.42
reactant: 187137
reactant: 187125
name: R_isoleucine_transaminase
type: Reaction

165558
stoichiometry: 1.0
species: 489950
type: SpeciesReference

280185
stoichiometry: 1.0
species: 478751
type: SpeciesReference

157824
units: 017602
value: 0.0
type: LocalParameter

284790
value: 0.0
type: LocalParameter

108641
stoichiometry: 1.0
species: 493430
type: SpeciesReference

190147
units: 017602
value: 0.0
type: LocalParameter

477051
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_D_Glucuronate_1_phosphate_C6H8O10P
type: Species

090934
value: 0.0
type: LocalParameter

196729
value: -0.040632
type: LocalParameter

492150
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_XTP_C10H11N4O15P3
type: Species

200224
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species: 475591
type: SpeciesReference

175613
stoichiometry: 1.0
species: 478351
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206715
stoichiometry: 1.0
species: 467132
type: SpeciesReference

037299
value: 0.0
type: LocalParameter

060625
stoichiometry: 1.0
species: 467132
type: SpeciesReference

194056
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species: 478711
type: SpeciesReference

204599
units: 017602
value: 0.0
type: LocalParameter

083120
stoichiometry: 1.0
species: 469232
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136080
stoichiometry: 1.0
species: 478851
type: SpeciesReference

064317
stoichiometry: 1.0
species: 483351
type: SpeciesReference

136795
value: 0.0
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138076
stoichiometry: 1.0
species: 478711
type: SpeciesReference

461913
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_2_5_Diamino_6__ribosylamino__4__3H__pyrimidinone_5__phosphate_C9H14N5O8P
type: Species

145954
stoichiometry: 2.0
species: 474352
type: SpeciesReference

249025
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species: 475451
type: SpeciesReference

026031
stoichiometry: 1.0
species: 464052
type: SpeciesReference

070888
units: 017602
value: 999999.0
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063760
units: 017602
value: 0.0
type: LocalParameter

221433
units: 017602
value: 0.0
type: LocalParameter

492370
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_L_Xylulose_C5H10O5
type: Species

116190
stoichiometry: 1.0
species: 494990
type: SpeciesReference

151138
value: 0.0
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137329
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149617
units: 017602
value: 0.0
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043598
stoichiometry: 1.0
species: 477991
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038503
units: 017602
value: 0.0
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120072
stoichiometry: 1.0
species: 495690
type: SpeciesReference

520627
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product: 159193
name: R_GDP_diphosphokinase
reactant: 159181
product: 159217
fast: false
type: Reaction
notes: GENE_ASSOCIATION: ( b2784 or b3650 ) PROTEIN_ASSOCIATION: ( RelA ) or ( SpoT ) SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
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reactant: 159169
product: 159205

055998
stoichiometry: 1.0
species: 483371
type: SpeciesReference

077433
stoichiometry: 1.0
species: 485830
type: SpeciesReference

067925
units: 017602
value: 0.0
type: LocalParameter

031263
value: 0.0
type: LocalParameter

213222
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value: 999999.0
type: LocalParameter

025678
units: 017602
value: 0.101931
type: LocalParameter

305345
stoichiometry: 1.0
species: 492270
type: SpeciesReference

236018
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type: LocalParameter

508308
kinetic law: 086280
product: 086268
reactant: 086256
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_dCMP_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

176726
units: 017602
value: 999999.0
type: LocalParameter

097914
units: 017602
value: 0.0
type: LocalParameter

271536
value: 0.0
type: LocalParameter

267100
units: 017602
value: 999999.0
type: LocalParameter

275702
units: 017602
value: 0.0
type: LocalParameter

527307
reversible: false
kinetic law: 200846
fast: false
type: Reaction
reactant: 200798
notes: GENE_ASSOCIATION: b3825 PROTEIN_ASSOCIATION: PldB SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS:
product: 200834
reactant: 200810
product: 200822
name: R_Lysophospholipase_L2__acyltransferase__2_acyl_glycerophosphoethanolamine__n_C181_

209042
stoichiometry: 1.0
species: 463153
type: SpeciesReference

473792
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_dUMP_C9H11N2O8P
type: Species

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stoichiometry: 1.0
species: 469232
type: SpeciesReference

296107
stoichiometry: 1.0
species: 486210
type: SpeciesReference

131164
value: 0.0
type: LocalParameter

042353
value: 0.0
type: LocalParameter

235520
units: 017602
value: 999999.0
type: LocalParameter

195990
stoichiometry: 1.0
species: 467132
type: SpeciesReference

133355
stoichiometry: 5.76E-4
species: 470692
type: SpeciesReference

112207
stoichiometry: 1.0
species: 471812
type: SpeciesReference

154860
stoichiometry: 1.0
species: 475831
type: SpeciesReference

517527
product: 138271
reversible: false
product: 138234
name: R_fatty_acid_CoA_ligase__hexanoate_transport_via_vectoral_Co_A_coupling_
reactant: 138210
kinetic law: 138283
product: 138246
product: 138259
reactant: 138222
type: Reaction
fast: false
reactant: 138185
reactant: 138198
notes: GENE_ASSOCIATION: ( b1805 or b1701 ) PROTEIN_ASSOCIATION: ( FadD ) or ( FadK ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 6.2.1.3

218159
units: 017602
value: 999999.0
type: LocalParameter

130649
units: 017602
value: 0.0
type: LocalParameter

139455
stoichiometry: 1.0
species: 475331
type: SpeciesReference

098314
units: 017602
value: 0.101931
type: LocalParameter

045757
units: 017602
value: 0.0
type: LocalParameter

146122
stoichiometry: 2.0
species: 478711
type: SpeciesReference

085724
units: 017602
value: 0.0
type: LocalParameter

256887
units: 017602
value: 999999.0
type: LocalParameter

038323
stoichiometry: 1.0
species: 466612
type: SpeciesReference

159181
stoichiometry: 1.0
species: 476572
type: SpeciesReference

173072
units: 017602
value: 0.0
type: LocalParameter

509068
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product: 090958
reactant: 090946
notes: GENE_ASSOCIATION: b2303 PROTEIN_ASSOCIATION: FolXec SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: true
name: R_dihydroneopterin_triphosphate_2__epimerase
type: Reaction

176582
stoichiometry: 1.0
species: 478551
type: SpeciesReference

134599
stoichiometry: 1.0
species: 472052
type: SpeciesReference

504829
type: Reaction
fast: false
product: 061889
reversible: true
name: R_aspartate_transaminase
reactant: 061853
reactant: 061865
notes: GENE_ASSOCIATION: b0928 PROTEIN_ASSOCIATION: AspC SUBSYSTEM: S_Alanine_and_Aspartate_Metabolism PROTEIN_CLASS: 2.6.1.1
product: 061877
kinetic law: 061901

026479
stoichiometry: 1.0
species: 478591
type: SpeciesReference

517528
product: 138416
fast: false
notes: GENE_ASSOCIATION: ( b1805 or b1701 ) PROTEIN_ASSOCIATION: ( FadD ) or ( FadK ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 6.2.1.3
kinetic law: 138452
reversible: false
reactant: 138392
type: Reaction
reactant: 138368
product: 138440
reactant: 138356
reactant: 138380
product: 138428
name: R_fatty_acid_CoA_ligase__octanoate_transport_via_vectoral_Co_A_coupling_
product: 138404

103382
stoichiometry: 3.0
species: 478711
type: SpeciesReference

026260
stoichiometry: 1.0
species: 469412
type: SpeciesReference

111616
value: 0.0
type: LocalParameter

227990
value: -0.004657
type: LocalParameter

174890
value: 0.0
type: LocalParameter

503449
reactant: 053087
fast: false
product: 053124
type: Reaction
kinetic law: 053136
notes: GENE_ASSOCIATION: b0110 PROTEIN_ASSOCIATION: AmpD SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS:
reactant: 053099
reversible: false
name: R_anhydrous_N_Acetylmuramyl_tetrapeptide_amidase
product: 053111

221868
units: 017602
value: 999999.0
type: LocalParameter

233240
stoichiometry: 1.0
species: 486210
type: SpeciesReference

218364
units: 017602
value: 0.0
type: LocalParameter

219539
stoichiometry: 1.0
species: 482671
type: SpeciesReference

483251
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Sodium_Na
type: Species

229294
units: 017602
value: 999999.0
type: LocalParameter

238368
units: 017602
value: 999999.0
type: LocalParameter

197700
stoichiometry: 1.0
species: 475631
type: SpeciesReference

491810
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Urea_CH4N2O
type: Species

296726
units: 017602
value: 0.0
type: LocalParameter

128257
value: 0.0
type: LocalParameter

059699
units: 017602
value: 0.0
type: LocalParameter

166123
units: 017602
value: 0.0
type: LocalParameter

536366
name: R_phosphoribosyl_ATP_pyrophosphatase
product: 264550
reactant: 264513
reactant: 264525
fast: false
notes: GENE_ASSOCIATION: b2026 PROTEIN_ASSOCIATION: HisI SUBSYSTEM: S_Histidine_Metabolism PROTEIN_CLASS: 3.6.1.31
reversible: false
product: 264562
product: 264538
kinetic law: 264574
type: Reaction

294080
value: 0.0
type: LocalParameter

262754
stoichiometry: 1.0
species: 470632
type: SpeciesReference

221108
value: 0.0
type: LocalParameter

132112
units: 017602
value: 0.0
type: LocalParameter

096963
stoichiometry: 1.0
species: 478711
type: SpeciesReference

172211
stoichiometry: 1.0
species: 478631
type: SpeciesReference

540846
type: Reaction
notes: GENE_ASSOCIATION: b3654 PROTEIN_ASSOCIATION: YicE SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reactant: 303596
product: 303632
reversible: false
product: 303620
fast: false
kinetic law: 303644
reactant: 303608
name: R_xanthine_transport_in_via_proton_symport__periplasm_

193544
stoichiometry: 1.0
species: 483351
type: SpeciesReference

143892
value: 0.0
type: LocalParameter

494770
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Fe_III_hydoxamate__unloaded_C9H18O6N3
type: Species

214465
stoichiometry: 1.0
species: 482251
type: SpeciesReference

507908
reactant: 083777
product: 083813
notes: GENE_ASSOCIATION: b4042 PROTEIN_ASSOCIATION: DgkA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.7.1.107
type: Reaction
reactant: 083789
product: 083825
fast: false
name: R_diacylglycerol_kinase__n_C181_
product: 083801
kinetic law: 083837
reversible: false

086039
stoichiometry: 1.0
species: 467132
type: SpeciesReference

278936
units: 017602
value: -999999.0
type: LocalParameter

028709
stoichiometry: 1.0
species: 466872
type: SpeciesReference

468752
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Aerobactin_C22H33FeN4O13
type: Species

244169
value: 0.0
type: LocalParameter

288733
stoichiometry: 1.0
species: 489290
type: SpeciesReference

181137
units: 017602
value: 0.0
type: LocalParameter

225792
stoichiometry: 1.0
species: 478751
type: SpeciesReference

023375
stoichiometry: 1.0
species: 490390
type: SpeciesReference

213632
units: 017602
value: 999999.0
type: LocalParameter

090728
stoichiometry: 1.0
species: 465552
type: SpeciesReference

540845
reactant: 303452
product: 303488
product: 303512
reactant: 303476
reversible: false
reactant: 303464
kinetic law: 303524
name: R_xanthine_dehydrogenase
notes: GENE_ASSOCIATION: ( b2866 and b2867 and b2868 ) PROTEIN_ASSOCIATION: XdhABC SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 1.1.1.204
fast: false
product: 303500
type: Reaction

505369
reversible: false
fast: false
product: 065363
type: Reaction
reactant: 065339
reactant: 065351
product: 065375
notes: GENE_ASSOCIATION: b1216 PROTEIN_ASSOCIATION: ChaA SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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kinetic law: 065387

032861
units: 017602
value: 0.0
type: LocalParameter

530106
kinetic law: 223607
name: R_NAD_transhydrogenase
product: 223583
reactant: 223559
fast: false
reactant: 223571
type: Reaction
product: 223595
notes: GENE_ASSOCIATION: ( b3962 or ( b1602 and b1603 ) ) PROTEIN_ASSOCIATION: ( SthA ) or ( Pnt ) SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS:
reversible: false

064523
units: 017602
value: 0.0
type: LocalParameter

276686
units: 017602
value: 0.0
type: LocalParameter

248077
stoichiometry: 1.0
species: 469232
type: SpeciesReference

133883
stoichiometry: 0.1379
species: 490610
type: SpeciesReference

530107
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reactant: 223705
product: 223730
reactant: 223693
reactant: 223681
notes: GENE_ASSOCIATION: b0931 PROTEIN_ASSOCIATION: PncB SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.4.2.11
reactant: 223717
name: R_nicotinic_acid_mononucleotide_pyrophosphorylase
product: 223766
product: 223742
type: Reaction
kinetic law: 223778
fast: false
reversible: false

541046
kinetic law: 305453
product: 305441
reactant: 305429
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_xylose_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

481431
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Maltohexaose_C36H62O31
type: Species

073350
units: 017602
value: 0.002522
type: LocalParameter

168306
units: 017602
value: 0.044091
type: LocalParameter

302543
units: 017602
value: 999999.0
type: LocalParameter

122139
units: 017602
value: 0.0
type: LocalParameter

526387
product: 194804
reversible: false
kinetic law: 194828
name: R_leucine_transaminase__irreversible_
notes: GENE_ASSOCIATION: ( b3770 or b4054 ) PROTEIN_ASSOCIATION: ( IlvE ) or ( TyrB ) SUBSYSTEM: S_Valine__Leucine__and_Isoleucine_Metabolism PROTEIN_CLASS: 2.6.1.42
fast: false
product: 194816
reactant: 194792
type: Reaction
reactant: 194780

287352
units: 017602
value: 0.0
type: LocalParameter

084501
units: 017602
value: -999999.0
type: LocalParameter

267258
value: 0.0
type: LocalParameter

194285
units: 017602
value: 0.0
type: LocalParameter

096276
units: 017602
value: 0.0
type: LocalParameter

243951
stoichiometry: 1.0
species: 484990
type: SpeciesReference

042618
stoichiometry: 1.0
species: 478711
type: SpeciesReference

541045
product: 305345
product: 305333
reactant: 305309
reactant: 305321
reversible: false
notes: GENE_ASSOCIATION: b4031 PROTEIN_ASSOCIATION: XylE SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
kinetic law: 305357
name: R_D_xylose_transport_in_via_proton_symport__periplasm_
type: Reaction

271742
units: 017602
value: 0.0
type: LocalParameter

121458
units: 017602
value: 0.0
type: LocalParameter

156299
stoichiometry: 1.0
species: 476111
type: SpeciesReference

250422
units: 017602
value: 999999.0
type: LocalParameter

198679
units: 017602
value: 0.0
type: LocalParameter

478431
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Guanine_C5H5N5O
type: Species

177965
stoichiometry: 1.0
species: 483351
type: SpeciesReference

510508
product: 099854
notes: GENE_ASSOCIATION: b1288 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.3.1.9
fast: false
reactant: 099818
name: R_enoyl_acyl_carrier_protein_reductase__NADH___n_C40_
type: Reaction
reactant: 099806
reactant: 099830
kinetic law: 099866
product: 099842
reversible: false

185003
value: 0.001281
type: LocalParameter

220974
units: 017602
value: 0.0
type: LocalParameter

215298
units: 017602
value: 999999.0
type: LocalParameter

158308
stoichiometry: 1.0
species: 476471
type: SpeciesReference

049440
stoichiometry: 1.0
species: 487010
type: SpeciesReference

306108
units: 017602
value: 999999.0
type: LocalParameter

240220
stoichiometry: 1.0
species: 483331
type: SpeciesReference

277216
units: 017602
value: 0.0
type: LocalParameter

052242
value: 0.0
type: LocalParameter

048463
units: 017602
value: 0.0
type: LocalParameter

278454
units: 017602
value: 0.0
type: LocalParameter

123514
value: 0.0
type: LocalParameter

224811
stoichiometry: 1.0
species: 472432
type: SpeciesReference

144576
units: 017602
value: 999999.0
type: LocalParameter

240849
stoichiometry: 1.0
species: 485830
type: SpeciesReference

068288
units: 017602
value: 0.0
type: LocalParameter

095412
stoichiometry: 1.0
species: 462593
type: SpeciesReference

471132
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_L_Carnitine_C7H15NO3
type: Species

160242
stoichiometry: 1.0
species: 476831
type: SpeciesReference

110561
stoichiometry: 1.0
species: 470292
type: SpeciesReference

188437
units: 017602
value: 0.0
type: LocalParameter

128473
value: -0.00943
type: LocalParameter

108869
units: 017602
value: 999999.0
type: LocalParameter

021770
units: 017602
value: 0.0
type: LocalParameter

281552
value: 0.0
type: LocalParameter

148245
value: 0.0
type: LocalParameter

205119
stoichiometry: 1.0
species: 480571
type: SpeciesReference

521467
notes: GENE_ASSOCIATION: b2688 PROTEIN_ASSOCIATION: GshA SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 6.3.2.2
reactant: 164446
fast: false
name: R_gamma_glutamylcysteine_synthetase
product: 164507
reversible: false
product: 164483
reactant: 164434
product: 164495
type: Reaction
kinetic law: 164520
product: 164471
reactant: 164458

137110
units: 017602
value: 0.0
type: LocalParameter

155052
units: 017602
value: 0.0
type: LocalParameter

030691
value: 0.0
type: LocalParameter

041130
units: 017602
value: 0.0
type: LocalParameter

021192
units: 017602
value: 0.0
type: LocalParameter

070014
stoichiometry: 1.0
species: 487010
type: SpeciesReference

296943
stoichiometry: 8.0
species: 486210
type: SpeciesReference

143045
stoichiometry: 1.0
species: 467132
type: SpeciesReference

037709
value: 0.0
type: LocalParameter

266424
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species: 478711
type: SpeciesReference

089976
stoichiometry: 1.0
species: 472752
type: SpeciesReference

217978
value: 0.0
type: LocalParameter

184036
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species: 479391
type: SpeciesReference

021998
stoichiometry: 1.0
species: 486210
type: SpeciesReference

106506
stoichiometry: 1.0
species: 492990
type: SpeciesReference

516848
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product: 131309
reactant: 131297
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_tungstate_exchange
type: Reaction

137571
stoichiometry: 1.0
species: 478711
type: SpeciesReference

468972
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_L_Asparagine_C4H8N2O3
type: Species

205338
stoichiometry: 1.0
species: 478711
type: SpeciesReference

032644
stoichiometry: 1.0
species: 469232
type: SpeciesReference

056144
value: 0.0
type: LocalParameter

064742
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species: 466132
type: SpeciesReference

178933
stoichiometry: 1.0
species: 467352
type: SpeciesReference

207671
value: 0.002328
type: LocalParameter

095292
stoichiometry: 1.0
species: 473452
type: SpeciesReference

204149
value: 0.0
type: LocalParameter

153483
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species: 475691
type: SpeciesReference

022145
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species: 486210
type: SpeciesReference

523647
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product: 177953
reactant: 177917
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) PROTEIN_ASSOCIATION: ( FadB ) or ( FadJ ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.35
type: Reaction
reversible: false
reactant: 177929
product: 177941
name: R_3_hydroxyacyl_CoA_dehydrogenase__3_oxododecanoyl_CoA_
fast: false
product: 177965

466072
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Acetaldehyde_C2H4O
type: Species

082322
value: 0.0
type: LocalParameter

177276
value: 0.0
type: LocalParameter

068433
units: 017602
value: 999999.0
type: LocalParameter

278503
value: -0.031085
type: LocalParameter

184749
value: -0.009314
type: LocalParameter

034405
stoichiometry: 1.0
species: 477311
type: SpeciesReference

145506
units: 017602
value: 999999.0
type: LocalParameter

081818
stoichiometry: 1.0
species: 478711
type: SpeciesReference

156855
value: 0.075442
type: LocalParameter

268909
stoichiometry: 1.0
species: 478631
type: SpeciesReference

149497
units: 017602
value: 999999.0
type: LocalParameter

028927
units: 017602
value: 999999.0
type: LocalParameter

483031
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
type: Species

190570
stoichiometry: 1.0
species: 483391
type: SpeciesReference

088906
stoichiometry: 1.0
species: 478591
type: SpeciesReference

164156
value: 0.0
type: LocalParameter

480131
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Inosine_C10H12N4O5
type: Species

107265
stoichiometry: 1.0
species: 466592
type: SpeciesReference

275036
units: 017602
value: 999999.0
type: LocalParameter

225343
value: 0.0
type: LocalParameter

027006
units: 017602
value: 0.0
type: LocalParameter

250204
units: 017602
value: 0.0
type: LocalParameter

076708
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type: LocalParameter

160026
units: 017602
value: 0.0
type: LocalParameter

211490
units: 017602
value: 0.0
type: LocalParameter

212399
stoichiometry: 1.0
species: 464912
type: SpeciesReference

086256
stoichiometry: 1.0
species: 472192
type: SpeciesReference

487010
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Pyruvate_C3H3O3
type: Species

197565
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species: 475631
type: SpeciesReference

215079
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value: 0.0
type: LocalParameter

249626
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species: 485511
type: SpeciesReference

128076
units: 017602
value: 0.0
type: LocalParameter

505149
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product: 063917
product: 063942
type: Reaction
reactant: 063881
reversible: false
reactant: 063905
name: R_betaine_aldehyde_dehydrogenase
product: 063929
kinetic law: 063954
reactant: 063893
notes: GENE_ASSOCIATION: b0312 PROTEIN_ASSOCIATION: BetB SUBSYSTEM: S_Unassigned PROTEIN_CLASS: 1.2.1.8

058448
value: 0.0
type: LocalParameter

109367
value: 0.0
type: LocalParameter

063917
stoichiometry: 1.0
species: 477551
type: SpeciesReference

176034
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250855
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species: 485290
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118642
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type: LocalParameter

494550
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
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112869
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234478
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value: 999999.0
type: LocalParameter

186230
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029361
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522987
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reactant: 174008
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_glutathione__ox__transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

476971
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_D_Gluconate_C6H11O7
type: Species

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value: -999999.0
type: LocalParameter

239007
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type: LocalParameter

045054
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type: LocalParameter

254118
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species: 472392
type: SpeciesReference

027755
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value: 0.16407
type: LocalParameter

480571
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_L_Lactate_C3H5O3
type: Species

155619
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species: 476191
type: SpeciesReference

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name: R_core_oligosaccharide_lipid_Ahexadecanoate_transferase__n_C160___extracellular_membrane_
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product: 195724
reactant: 195712
reversible: false
reactant: 195688
notes: GENE_ASSOCIATION: b0622 PROTEIN_ASSOCIATION: CrcA SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
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kinetic law: 195748
product: 195736

243104
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species: 485830
type: SpeciesReference

155473
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240002
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133667
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174670
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species: 478271
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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type: LocalParameter

531526
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product: 233252
reversible: false
name: R_Nucleoside_triphosphate_pyrophosphorylase__xtp_
product: 233228
reactant: 233216
type: Reaction
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product: 233240
reactant: 233204
notes: GENE_ASSOCIATION: b2954 PROTEIN_ASSOCIATION: RdgB SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.6.1.19

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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species: 467372
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species: 478591
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142222
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species: 478751
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203795
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species: 470632
type: SpeciesReference

532906
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reactant: 242116
reversible: false
reactant: 242104
fast: false
product: 242128
kinetic law: 242152
name: R_Phosphatidate_phosphatase__n_C120_
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product: 242140

021554
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species: 485011
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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288307
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species: 478591
type: SpeciesReference

299618
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species: 491470
type: SpeciesReference

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185420
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species: 479631
type: SpeciesReference

301869
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species: 478591
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284573
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species: 488870
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reactant: 115985
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_D_Fructuronate_exchange
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111482
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value: 999999.0
type: LocalParameter

050642
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value: 0.0
type: LocalParameter

254567
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species: 478631
type: SpeciesReference

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value: 999999.0
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196945
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type: LocalParameter

119334
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value: 999999.0
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175830
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species: 478391
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boundary condition: false
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initial amount: NaN
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288150
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species: 469232
type: SpeciesReference

165774
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520848
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fast: false
reversible: true
reactant: 160710
kinetic law: 160747
name: R_D_glucose_O_acetyltransferase
product: 160735
type: Reaction
product: 160723
reactant: 160698

101121
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species: 478751
type: SpeciesReference

102865
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051888
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293597
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value: 999999.0
type: LocalParameter

124493
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type: LocalParameter

057942
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type: LocalParameter

022577
units: 017602
value: 999999.0
type: LocalParameter

535106
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product: 256562
reactant: 256550
kinetic law: 256599
product: 256587
reversible: false
reactant: 256538
fast: false
product: 256575
notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.32

520847
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product: 160614
reactant: 160602
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reversible: false
name: R_1_4_alpha_glucan_branching_enzyme__glycogen___bglycogen_
type: Reaction

057218
units: 017602
value: 0.0
type: LocalParameter

164483
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species: 477371
type: SpeciesReference

100480
stoichiometry: 1.0
species: 483391
type: SpeciesReference

138295
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value: 0.0
type: LocalParameter

263336
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266991
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270155
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species: 485830
type: SpeciesReference

038107
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species: 466532
type: SpeciesReference

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type: LocalParameter

055779
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type: LocalParameter

123973
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value: 0.0
type: LocalParameter

200944
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species: 468372
type: SpeciesReference

517308
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product: 135406
product: 135394
reversible: false
type: Reaction
reactant: 135368
product: 135418
fast: false
kinetic law: 135430
reactant: 135381

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type: LocalParameter

269465
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species: 485830
type: SpeciesReference

104187
stoichiometry: 1.0
species: 474212
type: SpeciesReference

299829
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091128
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value: 0.296923
type: LocalParameter

074653
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type: LocalParameter

514648
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product: 120652
reactant: 120640
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reversible: true
name: R_hepta_acylated_core_oligosaccharide_lipid_A__E_coli__exchange
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value: 0.0
type: LocalParameter

100251
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species: 483371
type: SpeciesReference

065182
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value: -999999.0
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278005
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056579
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143469
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value: 0.0
type: LocalParameter

515028
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product: 122500
reactant: 122488
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Lactate_exchange
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species: 469232
type: SpeciesReference

517307
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product: 135253
reversible: false
reactant: 135241
kinetic law: 135290
product: 135278
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name: R_fatty_acyl_ACP_hydrolase
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reactant: 135228
product: 135266

035647
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species: 466132
type: SpeciesReference

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value: 0.0
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221650
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species: 478591
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value: 0.0
type: LocalParameter

479811
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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type: Species

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species: 478631
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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product: 170276
reactant: 170264
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_Glycine_transport_via_diffusion__extracellular_to_periplasm_
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species: 483211
type: SpeciesReference

222604
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166931
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172439
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271114
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type: LocalParameter

122718
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value: 0.0
type: LocalParameter

211138
units: 017602
value: 2.411752
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139673
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type: LocalParameter

508528
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product: 087575
product: 087562
reactant: 087550
notes: GENE_ASSOCIATION: b4477 PROTEIN_ASSOCIATION: DgoA SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 4.1.2.21
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reversible: true
name: R_2_dehydro_3_deoxy_6_phosphogalactonate_aldolase
type: Reaction

085506
stoichiometry: 1.0
species: 484851
type: SpeciesReference

195772
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value: 999999.0
type: LocalParameter

202553
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154642
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species: 483431
type: SpeciesReference

293150
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256454
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species: 478951
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species: 478591
type: SpeciesReference

294527
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value: 999999.0
type: LocalParameter

300494
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species: 478711
type: SpeciesReference

196327
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type: LocalParameter

185842
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species: 479691
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224105
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species: 478751
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206703
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species: 481591
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175601
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species: 478331
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215091
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value: 999999.0
type: LocalParameter

465472
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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species: 467372
type: SpeciesReference

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value: 0.0
type: LocalParameter

204587
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type: LocalParameter

305561
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species: 467132
type: SpeciesReference

194068
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species: 480651
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263567
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138064
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species: 468052
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145942
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species: 474271
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265059
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species: 469232
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value: 0.0
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064305
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species: 478711
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083133
stoichiometry: 1.0
species: 467132
type: SpeciesReference

070876
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060020
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value: 999999.0
type: LocalParameter

289660
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species: 489530
type: SpeciesReference

059302
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species: 487010
type: SpeciesReference

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026043
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species: 478591
type: SpeciesReference

063772
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type: LocalParameter

094640
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value: 4.6E-4
type: LocalParameter

152095
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species: 479011
type: SpeciesReference

163903
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301425
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species: 491830
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539026
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product: 283213
reactant: 283201
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_sucrose_transport_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

262323
value: 0.0
type: LocalParameter

136782
units: 017602
value: 999999.0
type: LocalParameter

164691
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value: 0.0
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069679
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species: 470192
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515048
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product: 122597
reactant: 122585
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Lactose_exchange
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108123
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value: 0.0
type: LocalParameter

242357
stoichiometry: 1.0
species: 484691
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262961
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232879
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value: 0.0
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058881
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type: LocalParameter

260402
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115636
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249012
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280172
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510108
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reactant: 097169
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_D_lactate_transport_via_diffusion__extracellular_to_periplasm_
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157812
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type: LocalParameter

266786
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165546
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species: 483371
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type: LocalParameter

121018
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type: LocalParameter

505589
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kinetic law: 066828
type: Reaction
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reactant: 066780
notes: GENE_ASSOCIATION: ( b0521 or b0323 or b2874 ) PROTEIN_ASSOCIATION: ( ArcCec ) or ( YahI ) or ( YqeA ) SUBSYSTEM: S_Unassigned PROTEIN_CLASS: 2.7.2.2
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product: 066804
reversible: true
reactant: 066768

060612
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species: 478591
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190135
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180703
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species: 481691
type: SpeciesReference

487450
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initial concentration: NaN
initial amount: NaN
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species: 468052
type: SpeciesReference

488390
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initial concentration: NaN
initial amount: NaN
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173085
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value: 999999.0
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133343
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species: 496749
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085736
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218147
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139443
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026467
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098302
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038311
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256899
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239443
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473132
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boundary condition: false
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159397
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118109
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304191
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091890
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460533
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031275
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174188
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213210
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305333
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239298
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025666
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149629
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097902
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271524
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187720
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176714
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209054
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042836
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species: 466972
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220490
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077420
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species: 478711
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035092
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275714
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kinetic law: 270433
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type: Reaction

531966
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product: 236090
reversible: false
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notes: GENE_ASSOCIATION: b2032 PROTEIN_ASSOCIATION: WbbK SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
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kinetic law: 236114
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name: R_glucosyltransferase_I__LPS_O16_antigen_biosynthesis_
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initial amount: NaN
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500409
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product: 034779
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032873
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522967
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reactant: 173849

276698
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064535
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product: 101229
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490030
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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type: LocalParameter

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initial amount: NaN
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018497
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kinetic law: 173183
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293838
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235302
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288138
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021782
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266292
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101109
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470192
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product: 298679
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302531
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084513
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185408
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initial concentration: NaN
initial amount: NaN
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096264
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538806
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notes: GENE_ASSOCIATION: ( b1377 or b2215 or b0241 or b0929 ) PROTEIN_ASSOCIATION: ( OmpN ) or ( OmpC ) or ( PhoE ) or ( OmpF ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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107277
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species: 493150
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088918
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species: 461733
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value: 999999.0
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143033
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product: 102421
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kinetic law: 102445
notes: GENE_ASSOCIATION: b1054 PROTEIN_ASSOCIATION: LpxL SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
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184048
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species: 467132
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product: 118520
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_D_Glucuronate_exchange
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473352
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product: 061009
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kinetic law: 061021

499049
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089964
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481411
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190871
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219309
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125160
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148931
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497969
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036059
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472652
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474731
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018205
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155607
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063905
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176046
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276281
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112857
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194490
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022589
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initial amount: NaN
in compartment: 460333
name: M_3_4_dihydroxy_2_butanone_4_phosphate_C4H7O6P
type: Species

030331
stoichiometry: 1.0
species: 470632
type: SpeciesReference

051876
units: 017602
value: 0.0
type: LocalParameter

102853
units: 017602
value: 0.0
type: LocalParameter

531206
product: 231191
product: 231179
notes: GENE_ASSOCIATION: ( b4055 or b0480 ) PROTEIN_ASSOCIATION: ( AphA ) or ( UshA ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
reactant: 231155
reactant: 231167
fast: false
type: Reaction
name: R_5__nucleotidase__dAMP_
kinetic law: 231203
reversible: false

250651
units: 017602
value: 0.0
type: LocalParameter

255508
stoichiometry: 1.0
species: 478751
type: SpeciesReference

057206
value: 0.0
type: LocalParameter

042401
stoichiometry: 1.0
species: 476572
type: SpeciesReference

049428
stoichiometry: 1.0
species: 477311
type: SpeciesReference

530986
kinetic law: 229878
type: Reaction
reversible: false
name: R_5__nucleotidase__dIMP___periplasm_
reactant: 229829
product: 229853
reactant: 229841
notes: GENE_ASSOCIATION: ( b0480 or b4055 ) PROTEIN_ASSOCIATION: ( UshA ) or ( AphA ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
fast: false
product: 229865

263348
units: 017602
value: 0.0
type: LocalParameter

154848
value: 0.0
type: LocalParameter

292331
stoichiometry: 1.0
species: 483431
type: SpeciesReference

487730
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Selenide_HSe
type: Species

100492
stoichiometry: 1.0
species: 489670
type: SpeciesReference

164471
stoichiometry: 1.0
species: 467132
type: SpeciesReference

142210
stoichiometry: 1.0
species: 474491
type: SpeciesReference

242574
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type: LocalParameter

256441
stoichiometry: 1.0
species: 478751
type: SpeciesReference

203783
stoichiometry: 1.0
species: 460853
type: SpeciesReference

506968
type: Reaction
reactant: 077239
product: 077275
reactant: 077227
fast: false
notes: GENE_ASSOCIATION: b0037 PROTEIN_ASSOCIATION: CaiC SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS:
reversible: false
product: 077251
product: 077263
reactant: 077215
kinetic law: 077287
name: R_Crotonobetaine_CoA_Ligase

021566
stoichiometry: 1.0
species: 486210
type: SpeciesReference

094045
stoichiometry: 1.0
species: 478591
type: SpeciesReference

494110
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_D_Cysteine_C3H7NO2S
type: Species

130662
units: 017602
value: 999999.0
type: LocalParameter

161146
value: 0.0
type: LocalParameter

506969
name: R_crotonobetaine_transport_via_ABC_system__periplasm_
product: 077396
product: 077433
reactant: 077359
type: Reaction
reactant: 077372
reactant: 077384
notes: GENE_ASSOCIATION: ( b2677 and b2678 and b2679 ) PROTEIN_ASSOCIATION: ( ProVec and ProW and ProX ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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product: 077420
product: 077408
fast: false
kinetic law: 077445

053512
units: 017602
value: 0.0
type: LocalParameter

188666
value: 0.0
type: LocalParameter

254555
value: 0.0
type: LocalParameter

251193
stoichiometry: 1.0
species: 478591
type: SpeciesReference

119346
value: 0.0
type: LocalParameter

111470
units: 017602
value: 0.0
type: LocalParameter

137341
stoichiometry: 1.0
species: 469232
type: SpeciesReference

301857
value: 0.0
type: LocalParameter

172427
value: 0.0
type: LocalParameter

098520
stoichiometry: 1.0
species: 489070
type: SpeciesReference

052009
stoichiometry: 1.0
species: 474232
type: SpeciesReference

181362
units: 017602
value: -999999.0
type: LocalParameter

222616
stoichiometry: 1.0
species: 469232
type: SpeciesReference

529686
reactant: 220272
product: 220296
kinetic law: 220320
reactant: 220284
product: 220308
type: Reaction
reversible: false
fast: false
notes: GENE_ASSOCIATION: b0159 PROTEIN_ASSOCIATION: Mtn SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 3.2.2.16
name: R_methylthioadenosine_nucleosidase

474092
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
type: Species

469332
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Butanal_C4H8O
type: Species

535286
reactant: 257757
reversible: false
product: 257793
product: 257769
product: 257781
reactant: 257745
type: Reaction
name: R_Phospholipase_A2__phosphatidylethanolamine__n_C120___periplasm_
kinetic law: 257805
notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.4
fast: false

085518
stoichiometry: 1.0
species: 470012
type: SpeciesReference

029131
stoichiometry: 1.0
species: 484111
type: SpeciesReference

501389
kinetic law: 040526
product: 040514
reactant: 040502
reactant: 040490
notes: GENE_ASSOCIATION: ( b0118 or b1276 ) PROTEIN_ASSOCIATION: ( AcnB ) or ( AcnA ) SUBSYSTEM: S_Citric_Acid_Cycle PROTEIN_CLASS: 4.2.1.3
fast: false
reversible: true
name: R_aconitase__half_reaction_B__Isocitrate_hydro_lyase_
type: Reaction

154630
stoichiometry: 1.0
species: 474232
type: SpeciesReference

293162
stoichiometry: 1.0
species: 462973
type: SpeciesReference

195784
value: 0.0
type: LocalParameter

494330
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Dihydroxyacetone_C3H6O3
type: Species

202541
units: 017602
value: 0.0
type: LocalParameter

498629
notes: GENE_ASSOCIATION: b2836 PROTEIN_ASSOCIATION: Aas SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.3.1.40
name: R_2_acyl_glycerophospho_glycerol_acyltransferase__n_C140_
reactant: 023375
type: Reaction
product: 023387
fast: false
product: 023412
reactant: 023351
kinetic law: 023424
product: 023400
reversible: false
reactant: 023363

224117
stoichiometry: 1.0
species: 478711
type: SpeciesReference

061129
stoichiometry: 1.0
species: 467132
type: SpeciesReference

139660
units: 017602
value: 0.0
type: LocalParameter

243322
stoichiometry: 1.0
species: 484851
type: SpeciesReference

460313
constant: true
size: NaN
spatial dimensions: 3.0
type: Compartment

300482
stoichiometry: 1.0
species: 473472
type: SpeciesReference

065399
units: 017602
value: 0.0
type: LocalParameter

196315
units: 017602
value: 0.015535
type: LocalParameter

516408
kinetic law: 129186
product: 129174
reactant: 129161
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_sulfur_dioxide_exchange
type: Reaction

106300
stoichiometry: 1.0
species: 465672
type: SpeciesReference

269453
stoichiometry: 1.0
species: 478711
type: SpeciesReference

031492
units: 017602
value: 999999.0
type: LocalParameter

227551
units: 017602
value: 0.0
type: LocalParameter

299817
units: 017602
value: 999999.0
type: LocalParameter

538805
kinetic law: 280527
product: 280515
reactant: 280503
notes: GENE_ASSOCIATION: s0001 PROTEIN_ASSOCIATION: SPONTANEOUS SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_SO2_transport_via_diffusion__periplasm_
type: Reaction

077202
value: 0.0
type: LocalParameter

200932
stoichiometry: 1.0
species: 485230
type: SpeciesReference

281118
units: 017602
value: 0.0
type: LocalParameter

074665
stoichiometry: 1.0
species: 470932
type: SpeciesReference

278017
value: 0.0
type: LocalParameter

270167
stoichiometry: 1.0
species: 462933
type: SpeciesReference

218790
stoichiometry: 1.0
species: 482511
type: SpeciesReference

117138
value: -0.035393
type: LocalParameter

229902
units: 017602
value: 999999.0
type: LocalParameter

035659
stoichiometry: 1.0
species: 468312
type: SpeciesReference

305115
value: 0.0
type: LocalParameter

062382
value: -0.002328
type: LocalParameter

026248
stoichiometry: 1.0
species: 463752
type: SpeciesReference

104174
stoichiometry: 1.0
species: 474211
type: SpeciesReference

232657
value: -0.009314
type: LocalParameter

465612
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_8_Amino_7_oxononanoate_C9H17NO3
type: Species

233228
stoichiometry: 1.0
species: 478711
type: SpeciesReference

464472
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
type: Species

217906
stoichiometry: 1.0
species: 482491
type: SpeciesReference

175336
stoichiometry: 1.0
species: 469232
type: SpeciesReference

097626
units: 017602
value: 999999.0
type: LocalParameter

185027
stoichiometry: 1.0
species: 478451
type: SpeciesReference

286700
units: 017602
value: 0.0
type: LocalParameter

536386
reversible: false
fast: false
product: 264706
notes: GENE_ASSOCIATION: b2557 PROTEIN_ASSOCIATION: PurL SUBSYSTEM: S_Purine_and_Pyrimidine_Biosynthesis PROTEIN_CLASS: 6.3.5.3
product: 264730
reactant: 264670
name: R_phosphoribosylformylglycinamidine_synthase
kinetic law: 264754
reactant: 264682
type: Reaction
product: 264694
product: 264718
product: 264742
reactant: 264658
reactant: 264646

194261
units: 017602
value: 999999.0
type: LocalParameter

177941
stoichiometry: 1.0
species: 464352
type: SpeciesReference

249868
units: 017602
value: 999999.0
type: LocalParameter

209706
units: 017602
value: 0.0
type: LocalParameter

095268
stoichiometry: 1.0
species: 473432
type: SpeciesReference

535706
product: 260462
reactant: 260450
product: 260474
kinetic law: 260486
fast: false
type: Reaction
reversible: false
notes: GENE_ASSOCIATION: ( b4226 or b2502 or b2744 ) PROTEIN_ASSOCIATION: ( Ppa ) or ( Ppx ) or ( SurE ) SUBSYSTEM: S_Anaplerotic_Reactions PROTEIN_CLASS: 3.6.1.1
reactant: 260438
name: R_inorganic_diphosphatase

122115
stoichiometry: 1.0
species: 495929
type: SpeciesReference

513628
kinetic law: 115720
product: 115708
reactant: 115696
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Formate_exchange
type: Reaction

485091
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_phosphatidylethanolamine__dihexadecanoyl__n_C160__C37H74N1O8P1
type: Species

251145
units: 017602
value: 999999.0
type: LocalParameter

287376
stoichiometry: 1.0
species: 489210
type: SpeciesReference

205350
stoichiometry: 1.0
species: 483351
type: SpeciesReference

212158
stoichiometry: 1.0
species: 478751
type: SpeciesReference

136734
stoichiometry: 1.0
species: 478711
type: SpeciesReference

526767
reversible: false
product: 197309
reactant: 197271
product: 197321
reactant: 197284
fast: false
notes: GENE_ASSOCIATION: b0494 PROTEIN_ASSOCIATION: TesA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.5
name: R_Lysophospholipase_L1__2_acylglycerophosphoethanolamine__n_C120___periplasm_
kinetic law: 197333
type: Reaction
product: 197296

167884
units: 017602
value: 0.0
type: LocalParameter

503469
name: R_anhydrous_N_Acetylmuramyl_tetrapeptide_L_D_carboxypeptidase
product: 053247
product: 053235
kinetic law: 053260
fast: false
reactant: 053211
reactant: 053223
notes: GENE_ASSOCIATION: b1192 PROTEIN_ASSOCIATION: LdcA SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS:
reversible: false
type: Reaction

261368
stoichiometry: 1.0
species: 478591
type: SpeciesReference

491410
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_UDP_D_glucuronate_C15H19N2O18P2
type: Species

118400
value: -0.021073
type: LocalParameter

155233
stoichiometry: 1.0
species: 485870
type: SpeciesReference

058207
value: 0.0
type: LocalParameter

128618
units: 017602
value: 0.0
type: LocalParameter

293319
stoichiometry: 1.0
species: 490370
type: SpeciesReference

302568
units: 017602
value: 0.015535
type: LocalParameter

021794
stoichiometry: 1.0
species: 462093
type: SpeciesReference

272381
value: 0.0
type: LocalParameter

203192
value: 0.0
type: LocalParameter

148269
value: -0.003027
type: LocalParameter

185239
units: 017602
value: 0.0
type: LocalParameter

288126
units: 017602
value: 0.434656
type: LocalParameter

290398
stoichiometry: 1.0
species: 467132
type: SpeciesReference

505389
kinetic law: 065483
product: 065471
reactant: 065459
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_calcium__Ca2__transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

128497
stoichiometry: 1.0
species: 496709
type: SpeciesReference

529606
fast: false
product: 219769
type: Reaction
notes: GENE_ASSOCIATION: ( b2519 or b0149 or b3396 ) PROTEIN_ASSOCIATION: ( PbpC ) or ( MrcB ) or ( MrcA ) SUBSYSTEM: S_Murein_Biosynthesis PROTEIN_CLASS:
product: 219793
kinetic law: 219805
name: R_murein_polymerizing_transglycosylase
reversible: false
reactant: 219757
product: 219781

517108
kinetic law: 132580
product: 132568
reactant: 132556
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Valine_exchange
type: Reaction

304119
value: 0.0
type: LocalParameter

101855
stoichiometry: 1.0
species: 464172
type: SpeciesReference

068264
stoichiometry: 1.0
species: 484851
type: SpeciesReference

138489
value: 0.0
type: LocalParameter

250615
stoichiometry: 1.0
species: 485270
type: SpeciesReference

255556
units: 017602
value: 999999.0
type: LocalParameter

287946
stoichiometry: 1.0
species: 489370
type: SpeciesReference

291776
stoichiometry: 1.0
species: 491210
type: SpeciesReference

057278
stoichiometry: 1.0
species: 467132
type: SpeciesReference

049464
units: 017602
value: -999999.0
type: LocalParameter

031201
stoichiometry: 1.0
species: 464992
type: SpeciesReference

039317
units: 017602
value: 0.0
type: LocalParameter

494790
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Ferrichrome_C27H42FeN9O12
type: Species

281178
stoichiometry: 1.0
species: 469232
type: SpeciesReference

091140
value: 0.0
type: LocalParameter

299853
value: 0.0
type: LocalParameter

211466
units: 017602
value: 999999.0
type: LocalParameter

235315
stoichiometry: 2.0
species: 483931
type: SpeciesReference

189383
stoichiometry: 1.0
species: 478511
type: SpeciesReference

302062
units: 017602
value: 0.0
type: LocalParameter

112268
value: 0.0
type: LocalParameter

215019
stoichiometry: 1.0
species: 478591
type: SpeciesReference

038794
units: 017602
value: 0.0
type: LocalParameter

118849
units: 017602
value: 999999.0
type: LocalParameter

213825
stoichiometry: 1.0
species: 489730
type: SpeciesReference

092387
value: 0.0
type: LocalParameter

275991
units: 017602
value: 0.0
type: LocalParameter

176349
value: 0.0
type: LocalParameter

142889
stoichiometry: 1.0
species: 474631
type: SpeciesReference

143288
stoichiometry: 1.0
species: 478751
type: SpeciesReference

296702
stoichiometry: 1.0
species: 491050
type: SpeciesReference

032886
value: 0.0
type: LocalParameter

278744
value: 0.0
type: LocalParameter

497929
kinetic law: 019503
product: 019491
reactant: 019479
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_2_3_diaminopropionate_transport_via_diffusion
type: Reaction

095050
stoichiometry: 1.0
species: 473372
type: SpeciesReference

054949
units: 017602
value: -999999.0
type: LocalParameter

220465
units: 017602
value: 999999.0
type: LocalParameter

166907
stoichiometry: 1.0
species: 478711
type: SpeciesReference

521447
product: 164336
name: R_4_aminobutyrateglutamate_antiport__periplasm_
reversible: true
reactant: 164324
fast: false
kinetic law: 164360
notes: GENE_ASSOCIATION: b1492 PROTEIN_ASSOCIATION: XasA SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 164348
reactant: 164312
type: Reaction

266664
stoichiometry: 1.0
species: 478711
type: SpeciesReference

184507
value: 0.0
type: LocalParameter

116178
stoichiometry: 1.0
species: 475411
type: SpeciesReference

192605
stoichiometry: 1.0
species: 485830
type: SpeciesReference

191853
units: 017602
value: 0.0
type: LocalParameter

122742
value: 0.0
type: LocalParameter

471152
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_L_Carnitine_C7H15NO3
type: Species

197321
stoichiometry: 1.0
species: 478751
type: SpeciesReference

504849
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reversible: false
fast: false
name: R_Aspartyl_tRNA_synthetase
reactant: 061998
reactant: 061973
type: Reaction
kinetic law: 062046
reactant: 061986
notes: GENE_ASSOCIATION: b1866 PROTEIN_ASSOCIATION: AspS SUBSYSTEM: S_tRNA_Charging PROTEIN_CLASS: 6.1.1.12
product: 062022
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174646
units: 017602
value: 0.0
type: LocalParameter

086015
stoichiometry: 1.0
species: 470632
type: SpeciesReference

181113
stoichiometry: 1.0
species: 479111
type: SpeciesReference

084789
units: 017602
value: 0.0
type: LocalParameter

074412
stoichiometry: 1.0
species: 478591
type: SpeciesReference

300422
units: 017602
value: 0.0
type: LocalParameter

304712
stoichiometry: 1.0
species: 492230
type: SpeciesReference

462173
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C161__C21H42NO7P1
type: Species

475711
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_sn_Glycero_3_phospho_1_inositol_C9H18O11P
type: Species

202529
value: 0.0
type: LocalParameter

264391
stoichiometry: 1.0
species: 461873
type: SpeciesReference

151734
stoichiometry: 1.0
species: 483111
type: SpeciesReference

218766
stoichiometry: 1.0
species: 482551
type: SpeciesReference

156612
value: 0.0
type: LocalParameter

228542
stoichiometry: 1.0
species: 478711
type: SpeciesReference

288758
units: 017602
value: 0.0
type: LocalParameter

106530
units: 017602
value: 0.0
type: LocalParameter

202312
stoichiometry: 1.0
species: 478591
type: SpeciesReference

184096
units: 017602
value: 0.0
type: LocalParameter

267718
value: 0.0
type: LocalParameter

132172
stoichiometry: 1.0
species: 491550
type: SpeciesReference

221120
units: 017602
value: 0.0
type: LocalParameter

297095
stoichiometry: 1.0
species: 491130
type: SpeciesReference

073046
stoichiometry: 1.0
species: 478711
type: SpeciesReference

175106
stoichiometry: 2.0
species: 478711
type: SpeciesReference

030583
stoichiometry: 1.0
species: 481171
type: SpeciesReference

152290
value: 0.0
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096252
units: 017602
value: 999999.0
type: LocalParameter

080901
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value: 0.0
type: LocalParameter

301809
units: 017602
value: -999999.0
type: LocalParameter

129513
value: 0.0
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025654
units: 017602
value: 999999.0
type: LocalParameter

174176
units: 017602
value: -999999.0
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197990
stoichiometry: 1.0
species: 484211
type: SpeciesReference

305369
units: 017602
value: 0.0
type: LocalParameter

067901
units: 017602
value: 999999.0
type: LocalParameter

053572
stoichiometry: 1.0
species: 481351
type: SpeciesReference

047785
units: 017602
value: 0.0
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230445
stoichiometry: 1.0
species: 478631
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483271
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has only substance units: false
initial concentration: NaN
initial amount: NaN
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254397
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value: 999999.0
type: LocalParameter

533186
notes: GENE_ASSOCIATION: b0087 PROTEIN_ASSOCIATION: MraY SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.7.8.13
type: Reaction
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reversible: false
product: 243818
reactant: 243806
reactant: 243793
fast: false
kinetic law: 243842
product: 243830

284549
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type: LocalParameter

248271
units: 017602
value: -999999.0
type: LocalParameter

283625
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value: 999999.0
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111894
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218304
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species: 478591
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239455
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value: 999999.0
type: LocalParameter

190339
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species: 480391
type: SpeciesReference

540825
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name: R_Valine_pyruvate_aminotransferase
notes: GENE_ASSOCIATION: b3572 PROTEIN_ASSOCIATION: AvtA SUBSYSTEM: S_Alanine_and_Aspartate_Metabolism PROTEIN_CLASS: 2.6.1.66
product: 303256
type: Reaction
kinetic law: 303281
reactant: 303232
product: 303269
fast: false
reactant: 303244

226336
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value: 999999.0
type: LocalParameter

487210
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
type: Species

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species: 477311
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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type: LocalParameter

139431
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value: 0.0
type: LocalParameter

495190
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: R_5__nucleotidase__AMP_
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type: Reaction
reversible: false
reactant: 231277
product: 231302
fast: false
reactant: 231290
product: 231314

270626
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species: 478591
type: SpeciesReference

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species: 469232
type: SpeciesReference

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value: 999999.0
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045732
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species: 468132
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species: 478711
type: SpeciesReference

133331
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species: 469572
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107205
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value: 0.0
type: LocalParameter

540826
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product: 303367
reactant: 303355
notes: GENE_ASSOCIATION: b4197 PROTEIN_ASSOCIATION: SgaU SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
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reversible: false
name: R_L_xylulose_5_phosphate_3_epimerase
type: Reaction

119578
stoichiometry: 1.0
species: 478011
type: SpeciesReference

085749
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species: 471972
type: SpeciesReference

460913
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_1_Acyl_sn_glycero_3_phosphoethanolamine__n_C120__C17H36NO7P1
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149425
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value: 0.0
type: LocalParameter

476131
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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species: 472832
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165534
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species: 477231
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128016
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species: 496609
type: SpeciesReference

075014
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041823
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species: 477311
type: SpeciesReference

180739
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value: 999999.0
type: LocalParameter

190123
units: 017602
value: 999999.0
type: LocalParameter

249650
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species: 478711
type: SpeciesReference

477071
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
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541065
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notes: GENE_ASSOCIATION: b3469 PROTEIN_ASSOCIATION: ZntA SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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reactant: 305525
name: R_Zinc__Zn2__ABC_transporter__periplasm_
kinetic law: 305609
product: 305561
reversible: false
type: Reaction
product: 305573
reactant: 305549
product: 305597
product: 305585

478451
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_H2_H2
type: Species

153939
units: 017602
value: 0.0
type: LocalParameter

111241
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species: 470992
type: SpeciesReference

040599
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species: 466792
type: SpeciesReference

514288
kinetic law: 118921
product: 118909
reactant: 118897
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_D_Glyceraldehyde_exchange
type: Reaction

244794
stoichiometry: 1.0
species: 483351
type: SpeciesReference

217219
stoichiometry: 1.0
species: 475451
type: SpeciesReference

305950
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species: 478711
type: SpeciesReference

076768
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species: 470692
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stoichiometry: 1.0
species: 478591
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species: 495490
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033403
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species: 472332
type: SpeciesReference

488850
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_L_tartrate_C4H4O6
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187927
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species: 483351
type: SpeciesReference

242345
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species: 478591
type: SpeciesReference

108135
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type: LocalParameter

541066
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product: 305706
fast: false
reactant: 305682
type: Reaction
product: 305718
notes: GENE_ASSOCIATION: ( b0752 or b3915 ) PROTEIN_ASSOCIATION: ( ZitB ) or ( FieF ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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reactant: 305694
reversible: false

520607
kinetic law: 159096
product: 159084
reactant: 159072
notes: GENE_ASSOCIATION: b2052 PROTEIN_ASSOCIATION: Fcl SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS:
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reversible: false
name: R_GDP_4_dehydro_6_deoxy_D_mannose_epimerase
type: Reaction

243708
stoichiometry: 1.0
species: 485870
type: SpeciesReference

188412
units: 017602
value: 999999.0
type: LocalParameter

062346
units: 017602
value: 0.0
type: LocalParameter

088495
value: 0.0
type: LocalParameter

130891
value: -0.075442
type: LocalParameter

517548
reversible: false
reactant: 138683
reactant: 138671
type: Reaction
name: R_FAD_reductase
fast: false
kinetic law: 138720
product: 138707
product: 138695
reactant: 138659
notes: GENE_ASSOCIATION: ( b2763 and b2764 ) PROTEIN_ASSOCIATION: CysIJ SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:

509088
kinetic law: 091080
product: 091068
product: 091056
reactant: 091044
notes: GENE_ASSOCIATION: b3389 PROTEIN_ASSOCIATION: AroB SUBSYSTEM: S_Tyrosine__Tryptophan__and_Phenylalanine_Metabolism PROTEIN_CLASS:
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reversible: false
name: R_3_dehydroquinate_synthase
type: Reaction

200700
stoichiometry: 1.0
species: 468472
type: SpeciesReference

029349
units: 017602
value: 999999.0
type: LocalParameter

047207
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type: LocalParameter

224872
units: 017602
value: 999999.0
type: LocalParameter

138052
stoichiometry: 1.0
species: 484271
type: SpeciesReference

085312
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145930
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species: 474831
type: SpeciesReference

062130
stoichiometry: 1.0
species: 478591
type: SpeciesReference

037275
units: 017602
value: 0.0
type: LocalParameter

060649
stoichiometry: 1.0
species: 485830
type: SpeciesReference

095472
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value: 999999.0
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204575
units: 017602
value: 0.0
type: LocalParameter

146604
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species: 478591
type: SpeciesReference

517547
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reactant: 138538
fast: false
product: 138562
reactant: 138550
type: Reaction
product: 138574
kinetic law: 138586
notes: GENE_ASSOCIATION: b3844 PROTEIN_ASSOCIATION: Fre SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
reversible: false
reactant: 138525

042631
stoichiometry: 1.0
species: 468012
type: SpeciesReference

532466
reactant: 239055
product: 239140
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
product: 239127
reversible: false
reactant: 239043
product: 239115
product: 239103
product: 239091
reactant: 239067
kinetic law: 239152
name: R_2_Octaprenylphenol_hydroxylase__anaerobic_
fast: false
reactant: 239079
type: Reaction

196705
value: 0.0
type: LocalParameter

068893
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species: 485170
type: SpeciesReference

206739
stoichiometry: 1.0
species: 481551
type: SpeciesReference

078145
stoichiometry: 1.0
species: 467132
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154618
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species: 478591
type: SpeciesReference

233216
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species: 492150
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254179
units: 017602
value: 0.0
type: LocalParameter

111676
units: 017602
value: 999999.0
type: LocalParameter

208070
units: 017602
value: -999999.0
type: LocalParameter

170240
units: 017602
value: 0.0
type: LocalParameter

115672
units: 017602
value: 0.0
type: LocalParameter

276087
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value: 0.0
type: LocalParameter

117126
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value: 0.0
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261621
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species: 469232
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107659
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species: 466932
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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102553
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species: 480831
type: SpeciesReference

229914
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type: LocalParameter

197772
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026236
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021132
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species: 462133
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200920
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species: 462298
type: SpeciesReference

055755
units: 017602
value: 0.0
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166763
stoichiometry: 1.0
species: 477551
type: SpeciesReference

021938
stoichiometry: 1.0
species: 462133
type: SpeciesReference

267936
units: 017602
value: 0.0
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487430
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_L_Rhamnulose_C6H12O5
type: Species

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value: 0.0
type: LocalParameter

217497
units: 017602
value: -999999.0
type: LocalParameter

465412
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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type: Species

149207
stoichiometry: 1.0
species: 475191
type: SpeciesReference

064768
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species: 465932
type: SpeciesReference

236259
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value: 0.0
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099388
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type: LocalParameter

265072
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species: 478591
type: SpeciesReference

235762
units: 017602
value: 0.0
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058653
stoichiometry: 1.0
species: 468832
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239672
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value: 0.0
type: LocalParameter

133113
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value: 0.0
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191223
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species: 469352
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190558
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species: 478711
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526947
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notes: GENE_ASSOCIATION: b0494 PROTEIN_ASSOCIATION: TesA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.5
product: 198510
kinetic law: 198534
type: Reaction
reversible: false
product: 198498
product: 198522
name: R_Lysophospholipase_L1__2_acylglycerophosphoglycerol__n_C141___periplasm_
reactant: 198474

069642
value: 0.0
type: LocalParameter

149858
units: 017602
value: 0.0
type: LocalParameter

083193
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value: 999999.0
type: LocalParameter

114717
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type: LocalParameter

064341
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species: 478591
type: SpeciesReference

051244
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type: LocalParameter

222628
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species: 483331
type: SpeciesReference

238380
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type: LocalParameter

500729
kinetic law: 036673
product: 036661
reactant: 036649
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_N_acetyl_D_glucosamine_1_phosphate_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

271138
value: 0.0
type: LocalParameter

492390
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_L_Xylulose_C5H10O5
type: Species

137353
stoichiometry: 1.0
species: 470692
type: SpeciesReference

045516
units: 017602
value: 0.0
type: LocalParameter

091878
stoichiometry: 1.0
species: 465312
type: SpeciesReference

479831
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_L_Isoleucine_C6H13NO2
type: Species

476351
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_D_Galacturonate_C6H9O7
type: Species

076985
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type: LocalParameter

507728
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reactant: 082635
reversible: true
type: Reaction
fast: false
product: 082672
kinetic law: 082684
notes: GENE_ASSOCIATION: b0474 PROTEIN_ASSOCIATION: Adk SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.7.4.11
reactant: 082647
product: 082659

119358
units: 017602
value: 0.0
type: LocalParameter

130674
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type: LocalParameter

084561
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species: 469232
type: SpeciesReference

041105
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species: 466852
type: SpeciesReference

060865
stoichiometry: 1.0
species: 467492
type: SpeciesReference

200297
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type: LocalParameter

026092
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value: 999999.0
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212845
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value: 999999.0
type: LocalParameter

250494
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species: 485250
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121090
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161826
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260679
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type: LocalParameter

168367
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species: 477831
type: SpeciesReference

129597
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value: 999999.0
type: LocalParameter

037058
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value: 0.0
type: LocalParameter

108352
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species: 493370
type: SpeciesReference

220731
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type: LocalParameter

031650
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type: LocalParameter

109307
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species: 468812
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039948
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species: 466792
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095892
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value: -999999.0
type: LocalParameter

531506
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product: 233108
product: 233120
name: R_Nucleoside_triphosphate_pyrophosphorylase__ditp_
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reactant: 233072
kinetic law: 233132
notes: GENE_ASSOCIATION: b2954 PROTEIN_ASSOCIATION: RdgB SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.6.1.19
reactant: 233084
fast: false
reversible: false

306132
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value: 0.002522
type: LocalParameter

025438
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value: 999999.0
type: LocalParameter

145713
stoichiometry: 1.0
species: 474811
type: SpeciesReference

263312
units: 017602
value: -999999.0
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218183
units: 017602
value: 0.0
type: LocalParameter

240280
units: 017602
value: 0.0
type: LocalParameter

168590
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type: LocalParameter

261141
stoichiometry: 1.0
species: 486030
type: SpeciesReference

124106
units: 017602
value: 0.0
type: LocalParameter

265289
units: 017602
value: 0.0
type: LocalParameter

508548
product: 087695
product: 087683
type: Reaction
reactant: 087671
name: R_deoxyguanylate_kinase__dGMPATP_
notes: GENE_ASSOCIATION: b3648 PROTEIN_ASSOCIATION: Gmkec SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.7.4.8
reactant: 087659
kinetic law: 087707
reversible: true
fast: false

525387
product: 188618
reactant: 188594
fast: false
kinetic law: 188630
product: 188606
reactant: 188582
reversible: false
type: Reaction
notes: GENE_ASSOCIATION: b0030 PROTEIN_ASSOCIATION: RihC SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.2.2.8
name: R_Inosine_hydrolase

089522
value: 0.0
type: LocalParameter

480591
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_L_Lactate_C3H5O3
type: Species

536166
reactant: 263263
reactant: 263250
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notes: GENE_ASSOCIATION: b2536 PROTEIN_ASSOCIATION: HcaT SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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kinetic law: 263299
type: Reaction
product: 263275
reversible: true
name: R_3_phenylpropionate_transport_via_proton_symport__reversible__periplasm_

228766
value: 0.0
type: LocalParameter

089736
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species: 478711
type: SpeciesReference

227711
stoichiometry: 1.0
species: 487090
type: SpeciesReference

120543
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type: SpeciesReference

108881
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030367
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value: 999999.0
type: LocalParameter

477291
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_D_Glutamate_C5H8NO4
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117989
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type: LocalParameter

185480
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value: 0.0
type: LocalParameter

160001
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value: 999999.0
type: LocalParameter

175553
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value: 999999.0
type: LocalParameter

073592
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112845
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type: LocalParameter

276293
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value: 999999.0
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073738
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141654
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species: 469232
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501989
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product: 044128
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notes: GENE_ASSOCIATION: b0469 PROTEIN_ASSOCIATION: Apt SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.4.2.7
product: 044140
type: Reaction
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kinetic law: 044152

177724
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value: 0.0
type: LocalParameter

019720
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species: 463652
type: SpeciesReference

305792
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023809
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species: 478911
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181982
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type: LocalParameter

471372
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boundary condition: false
has only substance units: false
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initial amount: NaN
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197541
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species: 460953
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505529
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reactant: 066357
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product: 066405
fast: false
reversible: false
reactant: 066345
product: 066393
product: 066417
notes: GENE_ASSOCIATION: ( b1711 and b1709 and b0158 ) PROTEIN_ASSOCIATION: ( BtuC and BtuD and BtuF ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reactant: 066369
kinetic law: 066429

058424
units: 017602
value: 0.0
type: LocalParameter

046100
stoichiometry: 1.0
species: 468292
type: SpeciesReference

193569
stoichiometry: 1.0
species: 483331
type: SpeciesReference

057495
units: 017602
value: 0.0
type: LocalParameter

212375
stoichiometry: 1.0
species: 471312
type: SpeciesReference

521227
kinetic law: 163001
reactant: 162953
fast: false
reactant: 162965
product: 162977
name: R_D_glucose_transport_in_via_proton_symport__periplasm_
notes: GENE_ASSOCIATION: b2943 PROTEIN_ASSOCIATION: GalP SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 162989
type: Reaction
reversible: false

144333
value: 0.0
type: LocalParameter

052629
stoichiometry: 1.0
species: 466152
type: SpeciesReference

220949
units: 017602
value: 999999.0
type: LocalParameter

090328
stoichiometry: 1.0
species: 472772
type: SpeciesReference

503689
reactant: 054588
kinetic law: 054624
name: R_alanyl_aminopeptidase__cys_gly_
fast: false
reactant: 054576
reversible: false
type: Reaction
product: 054612
notes: GENE_ASSOCIATION: ( b0932 or b0237 or b4260 or b2523 ) PROTEIN_ASSOCIATION: ( PepN ) or ( PepD ) or ( PepA ) or ( PepB ) SUBSYSTEM: S_Cysteine_Metabolism PROTEIN_CLASS: 3.4.11.2
product: 054600

289611
stoichiometry: 1.0
species: 482691
type: SpeciesReference

049682
stoichiometry: 1.0
species: 467752
type: SpeciesReference

133643
stoichiometry: 2.23E-4
species: 482391
type: SpeciesReference

480151
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Inosine_C10H12N4O5
type: Species

022516
value: -0.027941
type: LocalParameter

052484
stoichiometry: 1.0
species: 485330
type: SpeciesReference

509788
reversible: false
type: Reaction
product: 095292
reactant: 095268
name: R_DsbGglutathione_thiotransferase
fast: false
kinetic law: 095316
reactant: 095280
product: 095304
notes: GENE_ASSOCIATION: b0604 PROTEIN_ASSOCIATION: DsbG SUBSYSTEM: S_Unassigned PROTEIN_CLASS:

535926
type: Reaction
notes: GENE_ASSOCIATION: b2920 PROTEIN_ASSOCIATION: YgfH SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
name: R_Propanoyl_CoA_succinate_CoA_transferase
product: 261779
reversible: false
kinetic law: 261803
fast: false
reactant: 261755
reactant: 261767
product: 261791

231820
units: 017602
value: 0.0
type: LocalParameter

466552
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_N_Acetyl_D_mannosamine_6_phosphate_C8H14NO9P
type: Species

511948
kinetic law: 107581
product: 107569
reactant: 107557
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_O_Acetyl_L_serine_exchange
type: Reaction

513408
kinetic law: 114657
product: 114645
reactant: 114633
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Fe2_exchange
type: Reaction

525707
product: 190546
name: R_ketol_acid_reductoisomerase__2_3_dihydroxy_3_methylbutanoate_
reversible: true
kinetic law: 190582
product: 190558
fast: false
reactant: 190534
product: 190570
reactant: 190522
type: Reaction
notes: GENE_ASSOCIATION: b3774 PROTEIN_ASSOCIATION: IlvCec SUBSYSTEM: S_Valine__Leucine__and_Isoleucine_Metabolism PROTEIN_CLASS: 1.1.1.86

243128
units: 017602
value: 0.0
type: LocalParameter

041979
units: 017602
value: 0.0
type: LocalParameter

244506
stoichiometry: 1.0
species: 483351
type: SpeciesReference

059362
units: 017602
value: 0.0
type: LocalParameter

163227
units: 017602
value: 0.0
type: LocalParameter

136517
units: 017602
value: 999999.0
type: LocalParameter

101181
value: 0.0
type: LocalParameter

277459
value: 0.0
type: LocalParameter

027731
units: 017602
value: 999999.0
type: LocalParameter

163951
value: 0.0
type: LocalParameter

258445
stoichiometry: 1.0
species: 478751
type: SpeciesReference

251863
units: 017602
value: 0.0
type: LocalParameter

464252
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
type: Species

065714
stoichiometry: 2.0
species: 478591
type: SpeciesReference

255773
stoichiometry: 1.0
species: 478751
type: SpeciesReference

070258
stoichiometry: 1.0
species: 465932
type: SpeciesReference

068045
value: 0.0
type: LocalParameter

478671
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Hydrogen_sulfide_H2S
type: Species

293537
value: 0.0
type: LocalParameter

077493
units: 017602
value: 0.0
type: LocalParameter

207695
stoichiometry: 1.0
species: 481291
type: SpeciesReference

272970
units: 017602
value: 0.0
type: LocalParameter

123912
units: 017602
value: 0.0
type: LocalParameter

190883
units: 017602
value: 999999.0
type: LocalParameter

149641
units: 017602
value: 0.0
type: LocalParameter

100239
stoichiometry: 1.0
species: 479051
type: SpeciesReference

173280
stoichiometry: 1.0
species: 478111
type: SpeciesReference

540605
kinetic law: 301533
product: 301521
reactant: 301509
notes: GENE_ASSOCIATION: b3927 PROTEIN_ASSOCIATION: GlpF SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
reversible: true
name: R_Urea_transport_via_facilitate_diffusion__periplasm_
type: Reaction

204124
units: 017602
value: 0.0
type: LocalParameter

226552
stoichiometry: 1.0
species: 487170
type: SpeciesReference

035032
units: 017602
value: -999999.0
type: LocalParameter

285078
stoichiometry: 1.0
species: 488970
type: SpeciesReference

033850
stoichiometry: 1.0
species: 483431
type: SpeciesReference

275774
stoichiometry: 1.0
species: 472572
type: SpeciesReference

236030
units: 017602
value: 0.0
type: LocalParameter

143069
stoichiometry: 1.0
species: 478711
type: SpeciesReference

266448
stoichiometry: 1.0
species: 470632
type: SpeciesReference

481671
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_D_Mannose_1_phosphate_C6H11O9P
type: Species

292804
stoichiometry: 1.0
species: 490190
type: SpeciesReference

281395
value: 0.0
type: LocalParameter

054515
units: 017602
value: 0.0
type: LocalParameter

156830
value: 0.0
type: LocalParameter

153247
stoichiometry: 1.0
species: 475591
type: SpeciesReference

300204
stoichiometry: 1.0
species: 478591
type: SpeciesReference

526547
fast: false
product: 195868
reversible: false
product: 195856
notes: GENE_ASSOCIATION: b0622 PROTEIN_ASSOCIATION: CrcA SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
kinetic law: 195880
reactant: 195832
reactant: 195820
type: Reaction
name: R_Lipid_Ahexadecanoate_transferase__n_C160___extracellular_membrane_
reactant: 195844

072357
value: 0.0
type: LocalParameter

287596
stoichiometry: 1.0
species: 466052
type: SpeciesReference

159169
stoichiometry: 1.0
species: 469232
type: SpeciesReference

229222
stoichiometry: 1.0
species: 478591
type: SpeciesReference

030137
stoichiometry: 1.0
species: 481171
type: SpeciesReference

038395
value: 0.0
type: LocalParameter

048161
units: 017602
value: -999999.0
type: LocalParameter

086981
stoichiometry: 1.0
species: 478711
type: SpeciesReference

171620
units: 017602
value: 0.0
type: LocalParameter

146194
value: -0.037372
type: LocalParameter

298474
units: 017602
value: 999999.0
type: LocalParameter

256827
stoichiometry: 1.0
species: 461213
type: SpeciesReference

282245
stoichiometry: 1.0
species: 463413
type: SpeciesReference

184725
value: 0.0
type: LocalParameter

096723
units: 017602
value: 0.0
type: LocalParameter

172451
value: 0.055417
type: LocalParameter

476951
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_D_Gluconate_C6H11O7
type: Species

203180
units: 017602
value: 999999.0
type: LocalParameter

060008
units: 017602
value: 0.0
type: LocalParameter

293307
stoichiometry: 1.0
species: 478591
type: SpeciesReference

510708
notes: GENE_ASSOCIATION: ( b3793 and b3785 ) PROTEIN_ASSOCIATION: ( WzyE and WzzE ) SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
name: R_enterobacterial_common_antigen_polymerase__periplasm_
reactant: 101085
reversible: false
product: 101109
fast: false
reactant: 101097
kinetic law: 101145
product: 101133
product: 101121
type: Reaction

277229
units: 017602
value: 0.0
type: LocalParameter

188425
value: 0.0
type: LocalParameter

112616
stoichiometry: 1.0
species: 494250
type: SpeciesReference

128485
stoichiometry: 1.0
species: 487190
type: SpeciesReference

522947
reactant: 173740
notes: GENE_ASSOCIATION: b2988 PROTEIN_ASSOCIATION: Gsp SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 3.5.1.78
reactant: 173728
reversible: false
name: R_Glutathionylspermidine_amidase
product: 173765
fast: false
kinetic law: 173777
product: 173753
type: Reaction

110597
units: 017602
value: 0.0
type: LocalParameter

185227
units: 017602
value: 0.0
type: LocalParameter

288114
value: 0.0
type: LocalParameter

290386
stoichiometry: 1.0
species: 489470
type: SpeciesReference

531946
type: Reaction
product: 235970
fast: false
reactant: 235932
kinetic law: 235982
notes: GENE_ASSOCIATION: b2034 PROTEIN_ASSOCIATION: WbbI SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
name: R_galactofuranosyltransferase__LPS_O16_antigen_biosynthesis_
reversible: false
product: 235958
reactant: 235920
product: 235945

183599
units: 017602
value: 0.0
type: LocalParameter

255568
value: 0.0
type: LocalParameter

250627
stoichiometry: 1.0
species: 485870
type: SpeciesReference

526107
product: 193061
notes: GENE_ASSOCIATION: b2257 PROTEIN_ASSOCIATION: ArnT SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
reversible: false
name: R_4_amino_4_deoxy_L_arabinotransferase__LPS_lipid_A_modification__periplasmic_face_of_membrane__
product: 193073
reactant: 193049
kinetic law: 193085
fast: false
reactant: 193037
type: Reaction

253300
stoichiometry: 1.0
species: 486210
type: SpeciesReference

039329
value: -0.453001
type: LocalParameter

101867
stoichiometry: 1.0
species: 478591
type: SpeciesReference

537326
reactant: 270505
product: 270529
notes: GENE_ASSOCIATION: b2407 PROTEIN_ASSOCIATION: XapA SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.4.2.1
kinetic law: 270553
type: Reaction
reactant: 270517
name: R_purine_nucleoside_phosphorylase__Xanthosine_
product: 270541
reversible: true
fast: false

479631
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Hypoxanthine_C5H4N4O
type: Species

291764
stoichiometry: 1.0
species: 489770
type: SpeciesReference

057266
stoichiometry: 1.0
species: 468612
type: SpeciesReference

031638
units: 017602
value: 0.0
type: LocalParameter

185015
stoichiometry: 2.0
species: 478711
type: SpeciesReference

097614
units: 017602
value: 0.0
type: LocalParameter

173692
value: 0.0
type: LocalParameter

510128
notes: GENE_ASSOCIATION: b2927 PROTEIN_ASSOCIATION: Epd SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
product: 097302
fast: false
product: 097314
reactant: 097278
kinetic law: 097338
product: 097326
reactant: 097290
type: Reaction
name: R_Erythrose_4_phosphate_dehydrogenase
reversible: true
reactant: 097266

271730
value: 0.0
type: LocalParameter

260691
stoichiometry: 1.0
species: 467132
type: SpeciesReference

175324
value: -0.018628
type: LocalParameter

472892
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_dIMP_C10H11N4O7P
type: Species

495730
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_H2O_H2O
type: Species

286712
units: 017602
value: 999999.0
type: LocalParameter

033838
stoichiometry: 1.0
species: 482791
type: SpeciesReference

177953
stoichiometry: 1.0
species: 478711
type: SpeciesReference

121078
units: 017602
value: 999999.0
type: LocalParameter

287388
stoichiometry: 1.0
species: 489230
type: SpeciesReference

251133
units: 017602
value: 0.0
type: LocalParameter

212146
stoichiometry: 1.0
species: 481891
type: SpeciesReference

136722
stoichiometry: 1.0
species: 470692
type: SpeciesReference

302555
value: 0.0
type: LocalParameter

515868
kinetic law: 126580
product: 126568
reactant: 126556
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_octadecenoate__n_C181__exchange
type: Reaction

122103
stoichiometry: 1.0
species: 480211
type: SpeciesReference

058219
stoichiometry: 1.0
species: 468852
type: SpeciesReference

209719
units: 017602
value: 999999.0
type: LocalParameter

196993
value: -0.059259
type: LocalParameter

167872
value: 0.0
type: LocalParameter

261356
stoichiometry: 1.0
species: 470632
type: SpeciesReference

118412
stoichiometry: 1.0
species: 477051
type: SpeciesReference

463093
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_2_keto_4_methylthiobutyrate_C5H7O3S
type: Species

149870
value: 0.0
type: LocalParameter

266676
stoichiometry: 1.0
species: 486670
type: SpeciesReference

095255
value: -0.003143
type: LocalParameter

234296
stoichiometry: 1.0
species: 478711
type: SpeciesReference

064781
stoichiometry: 1.0
species: 469352
type: SpeciesReference

122754
units: 017602
value: 0.0
type: LocalParameter

535946
kinetic law: 261924
fast: false
reactant: 261875
product: 261911
reactant: 261887
reversible: false
product: 261899
notes: GENE_ASSOCIATION: b3650 PROTEIN_ASSOCIATION: SpoT SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 3.1.7.2
type: Reaction
name: R_guanosine_3__5__bis_diphosphate__3__diphosphatase

302075
units: 017602
value: 999999.0
type: LocalParameter

202517
units: 017602
value: 999999.0
type: LocalParameter

515648
kinetic law: 125510
product: 125498
reactant: 125486
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Nicotinate_exchange
type: Reaction

086003
stoichiometry: 1.0
species: 469232
type: SpeciesReference

300410
value: 0.0
type: LocalParameter

074424
stoichiometry: 1.0
species: 470952
type: SpeciesReference

174658
value: -0.018628
type: LocalParameter

466532
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_N_Acetyl_D_mannosamine_C8H15NO6
type: Species

214477
stoichiometry: 2.0
species: 478751
type: SpeciesReference

218778
stoichiometry: 1.0
species: 478711
type: SpeciesReference

539626
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reversible: false
notes: GENE_ASSOCIATION: b2827 PROTEIN_ASSOCIATION: ThyA SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.1.1.45
kinetic law: 290674
type: Reaction
product: 290662
reactant: 290626
name: R_thymidylate_synthase
product: 290650
reactant: 290638

156624
units: 017602
value: 0.0
type: LocalParameter

151188
stoichiometry: 1.0
species: 473612
type: SpeciesReference

151746
stoichiometry: 1.0
species: 461453
type: SpeciesReference

193556
stoichiometry: 1.0
species: 480631
type: SpeciesReference

031214
stoichiometry: 1.0
species: 465012
type: SpeciesReference

143275
stoichiometry: 1.0
species: 474551
type: SpeciesReference

299841
units: 017602
value: 0.0
type: LocalParameter

211478
value: 0.0
type: LocalParameter

278731
units: 017602
value: 999999.0
type: LocalParameter

096951
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species: 473892
type: SpeciesReference

235327
stoichiometry: 1.0
species: 478751
type: SpeciesReference

189395
stoichiometry: 1.0
species: 483351
type: SpeciesReference

112256
units: 017602
value: 999999.0
type: LocalParameter

091152
stoichiometry: 1.0
species: 463692
type: SpeciesReference

118837
units: 017602
value: 0.0
type: LocalParameter

187708
units: 017602
value: -999999.0
type: LocalParameter

220478
value: 0.0
type: LocalParameter

092399
units: 017602
value: 2.22E-4
type: LocalParameter

200908
value: -0.402939
type: LocalParameter

252929
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species: 485730
type: SpeciesReference

539625
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name: R_thymidine_phosphorylase
reactant: 290506
product: 290542
type: Reaction
reactant: 290518
product: 290530
reversible: true
notes: GENE_ASSOCIATION: b4382 PROTEIN_ASSOCIATION: DeoA SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.4.2.4
fast: false

511368
kinetic law: 104782
product: 104770
reactant: 104758
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_2__3__Cyclic_CMP_exchange
type: Reaction

040178
stoichiometry: 1.0
species: 466732
type: SpeciesReference

032898
units: 017602
value: 0.0
type: LocalParameter

266003
stoichiometry: 1.0
species: 486630
type: SpeciesReference

017759
stoichiometry: 1.0
species: 460413
type: SpeciesReference

221856
units: 017602
value: 0.0
type: LocalParameter

075801
units: 017602
value: 0.0
type: LocalParameter

226323
units: 017602
value: 0.0
type: LocalParameter

098593
value: 0.0
type: LocalParameter

460553
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_1_2_Diacyl_sn_glycerol__dihexadec_9_enoyl__n_C161__C35H64O5
type: Species

176570
value: 0.0
type: LocalParameter

175890
units: 017602
value: 0.0
type: LocalParameter

030619
stoichiometry: 1.0
species: 470632
type: SpeciesReference

210506
stoichiometry: 1.0
species: 482871
type: SpeciesReference

239467
value: 0.0
type: LocalParameter

490050
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_tRNA_Lys__R
type: Species

068481
stoichiometry: 1.0
species: 464912
type: SpeciesReference

069436
stoichiometry: 1.0
species: 467132
type: SpeciesReference

270614
value: 0.0
type: LocalParameter

262729
stoichiometry: 1.0
species: 478711
type: SpeciesReference

107217
units: 017602
value: 999999.0
type: LocalParameter

028975
stoichiometry: 1.0
species: 464512
type: SpeciesReference

225041
stoichiometry: 1.0
species: 469232
type: SpeciesReference

149413
value: 0.0
type: LocalParameter

106542
units: 017602
value: 999999.0
type: LocalParameter

504629
reactant: 060600
kinetic law: 060673
product: 060649
fast: false
product: 060625
product: 060661
reversible: false
name: R_arsenite_efflux_via_ATP_hydrolysis__periplasm_
notes: GENE_ASSOCIATION: b3502 PROTEIN_ASSOCIATION: ArsB SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
type: Reaction
product: 060637
reactant: 060612
reactant: 060588

209030
value: 0.0
type: LocalParameter

296119
stoichiometry: 1.0
species: 490890
type: SpeciesReference

202300
stoichiometry: 1.0
species: 462173
type: SpeciesReference

248283
units: 017602
value: 999999.0
type: LocalParameter

228554
stoichiometry: 1.0
species: 483331
type: SpeciesReference

073058
stoichiometry: 1.0
species: 485830
type: SpeciesReference

030571
stoichiometry: 1.0
species: 479051
type: SpeciesReference

175118
stoichiometry: 1.0
species: 486210
type: SpeciesReference

501149
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reactant: 039097
type: Reaction
product: 039134
notes: GENE_ASSOCIATION: b0221 PROTEIN_ASSOCIATION: FadE SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.3.99.3
reactant: 039109
fast: false
name: R_acyl_CoA_dehydrogenase__octanoyl_CoA_
kinetic law: 039146
product: 039121

132160
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type: LocalParameter

180302
stoichiometry: 1.0
species: 478711
type: SpeciesReference

522827
reactant: 172994
kinetic law: 173059
name: R_Glycerophosphodiester_phosphodiesterase__Glycerophosphoinositol_
reversible: false
type: Reaction
product: 173046
product: 173033
reactant: 173007
fast: false
product: 173020
notes: GENE_ASSOCIATION: b2239 PROTEIN_ASSOCIATION: GlpQ SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.4.46

025642
units: 017602
value: 0.0
type: LocalParameter

230457
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species: 472292
type: SpeciesReference

067913
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type: LocalParameter

096240
units: 017602
value: -999999.0
type: LocalParameter

103358
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species: 461773
type: SpeciesReference

129525
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value: 0.0
type: LocalParameter

283613
units: 017602
value: -999999.0
type: LocalParameter

124456
units: 017602
value: 0.0
type: LocalParameter

297082
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species: 485870
type: SpeciesReference

487970
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Shikimate_C7H9O5
type: Species

218316
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species: 481691
type: SpeciesReference

148919
units: 017602
value: 0.0
type: LocalParameter

476331
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_D_Galacturonate_C6H9O7
type: Species

506909
kinetic law: 076648
product: 076636
reactant: 076624
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_L_carnitine_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

053584
stoichiometry: 1.0
species: 481491
type: SpeciesReference

047219
stoichiometry: 1.0
species: 461353
type: SpeciesReference

194792
stoichiometry: 1.0
species: 477311
type: SpeciesReference

155004
stoichiometry: 1.0
species: 475831
type: SpeciesReference

064329
stoichiometry: 1.0
species: 469372
type: SpeciesReference

224860
units: 017602
value: -999999.0
type: LocalParameter

514488
kinetic law: 119891
product: 119879
reactant: 119867
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Reduced_glutathione_exchange
type: Reaction

494350
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_dIMP_C10H11N4O7P
type: Species

095484
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type: LocalParameter

204563
units: 017602
value: 0.0
type: LocalParameter

483871
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
type: Species

042643
stoichiometry: 1.0
species: 470632
type: SpeciesReference

037287
units: 017602
value: 999999.0
type: LocalParameter

060637
stoichiometry: 1.0
species: 478711
type: SpeciesReference

249038
stoichiometry: 1.0
species: 475831
type: SpeciesReference

196387
stoichiometry: 1.0
species: 478751
type: SpeciesReference

138040
stoichiometry: 1.0
species: 478751
type: SpeciesReference

062142
stoichiometry: 1.0
species: 469152
type: SpeciesReference

288539
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type: LocalParameter

068881
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species: 467992
type: SpeciesReference

154606
stoichiometry: 1.0
species: 476391
type: SpeciesReference

297230
units: 017602
value: 999999.0
type: LocalParameter

078133
stoichiometry: 1.0
species: 478591
type: SpeciesReference

206727
stoichiometry: 1.0
species: 478711
type: SpeciesReference

465852
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Aminoacetaldehyde_C2H6NO
type: Species

498689
reactant: 023797
product: 023833
reactant: 023809
fast: false
reactant: 023785
type: Reaction
reversible: false
product: 023845
notes: GENE_ASSOCIATION: b2836 PROTEIN_ASSOCIATION: Aas SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.3.1.40
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product: 023821
kinetic law: 023857

190111
units: 017602
value: 0.0
type: LocalParameter

125618
units: 017602
value: -999999.0
type: LocalParameter

249662
stoichiometry: 1.0
species: 485830
type: SpeciesReference

242332
value: 0.0
type: LocalParameter

220961
value: 0.0
type: LocalParameter

128004
stoichiometry: 1.0
species: 486590
type: SpeciesReference

165522
stoichiometry: 1.0
species: 483391
type: SpeciesReference

041811
stoichiometry: 1.0
species: 464852
type: SpeciesReference

185697
stoichiometry: 1.0
species: 479711
type: SpeciesReference

180727
units: 017602
value: 0.0
type: LocalParameter

305962
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species: 485830
type: SpeciesReference

065158
stoichiometry: 1.0
species: 478711
type: SpeciesReference

243563
stoichiometry: 1.0
species: 484871
type: SpeciesReference

040587
value: 0.0
type: LocalParameter

490630
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_L_Tyrosine_C9H11NO3
type: Species

158333
units: 017602
value: -999999.0
type: LocalParameter

187915
stoichiometry: 1.0
species: 478711
type: SpeciesReference

108147
stoichiometry: 1.0
species: 467452
type: SpeciesReference

161619
stoichiometry: 1.0
species: 477031
type: SpeciesReference

033415
stoichiometry: 1.0
species: 486210
type: SpeciesReference

062358
value: 0.0
type: LocalParameter

088483
units: 017602
value: 999999.0
type: LocalParameter

254191
value: 0.0
type: LocalParameter

232631
value: 0.0
type: LocalParameter

099376
units: 017602
value: 0.0
type: LocalParameter

487750
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Selenophosphate_H2O3PSe
type: Species

239684
value: 0.0
type: LocalParameter

195760
units: 017602
value: 0.0
type: LocalParameter

058641
stoichiometry: 1.0
species: 478591
type: SpeciesReference

133101
value: 0.0
type: LocalParameter

538826
reactant: 280792
type: Reaction
name: R_Succinylornithine_transaminase
notes: GENE_ASSOCIATION: b1748 PROTEIN_ASSOCIATION: AstC SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS:
product: 280816
kinetic law: 280841
reactant: 280804
reversible: false
product: 280828
fast: false

069654
units: 017602
value: 0.0
type: LocalParameter

091865
stoichiometry: 1.0
species: 483391
type: SpeciesReference

079795
units: 017602
value: 0.0
type: LocalParameter

238392
units: 017602
value: 0.264204
type: LocalParameter

145918
stoichiometry: 1.0
species: 474272
type: SpeciesReference

504409
fast: false
product: 059169
notes: GENE_ASSOCIATION: b4192 PROTEIN_ASSOCIATION: YjfR SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
reactant: 059157
name: R_L_ascorbate_6_phosphate_lactonase
kinetic law: 059193
reactant: 059145
reversible: false
product: 059181
type: Reaction

271126
units: 017602
value: 999999.0
type: LocalParameter

148490
value: 0.0
type: LocalParameter

114705
units: 017602
value: -0.006032
type: LocalParameter

518787
product: 148063
reactant: 148027
product: 148051
name: R_FMN_reductase
fast: false
notes: GENE_ASSOCIATION: ( b0937 or b3844 ) PROTEIN_ASSOCIATION: ( SsuE ) or ( Fre ) SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 148039
kinetic law: 148075
type: Reaction
reactant: 148015
reversible: false

051232
units: 017602
value: 999999.0
type: LocalParameter

124238
stoichiometry: 1.0
species: 496149
type: SpeciesReference

058869
value: 0.0
type: LocalParameter

111688
value: 0.0
type: LocalParameter

170252
value: 0.0
type: LocalParameter

046532
stoichiometry: 1.0
species: 467332
type: SpeciesReference

233204
stoichiometry: 1.0
species: 478591
type: SpeciesReference

197760
units: 017602
value: 999999.0
type: LocalParameter

102541
stoichiometry: 1.0
species: 465632
type: SpeciesReference

026224
units: 017602
value: 0.0
type: LocalParameter

229926
units: 017602
value: 0.0
type: LocalParameter

117114
value: 0.0
type: LocalParameter

115660
value: 0.0
type: LocalParameter

129307
units: 017602
value: 999999.0
type: LocalParameter

467912
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Allantoate_C4H7N4O4
type: Species

514268
kinetic law: 118825
product: 118813
reactant: 118801
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Glycine_exchange
type: Reaction

079503
units: 017602
value: 0.0
type: LocalParameter

525167
fast: false
product: 187283
reactant: 187246
product: 187295
name: R_Isoleucyl_tRNA_synthetase
reversible: false
product: 187307
reactant: 187259
type: Reaction
notes: GENE_ASSOCIATION: b0026 PROTEIN_ASSOCIATION: IleS SUBSYSTEM: S_tRNA_Charging PROTEIN_CLASS: 6.1.1.5
kinetic law: 187320
reactant: 187271

267948
units: 017602
value: 999999.0
type: LocalParameter

076780
stoichiometry: 1.0
species: 478711
type: SpeciesReference

293898
stoichiometry: 1.0
species: 490530
type: SpeciesReference

473372
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_protein_disulfide_isomerase_II__reduced__XH2
type: Species

121796
value: -0.142269
type: LocalParameter

462893
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_2_Demethylmenaquinone_8_C50H70O2
type: Species

256611
units: 017602
value: 0.0
type: LocalParameter

166775
stoichiometry: 1.0
species: 478711
type: SpeciesReference

021926
value: -0.027941
type: LocalParameter

510588
product: 100372
reversible: false
kinetic law: 100396
product: 100384
reactant: 100360
notes: GENE_ASSOCIATION: b1288 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.3.1.9
name: R_enoyl_acyl_carrier_protein_reductase__NADH___n_C80_
reactant: 100348
type: Reaction
reactant: 100336
fast: false

074641
units: 017602
value: 0.0
type: LocalParameter

055767
units: 017602
value: 999999.0
type: LocalParameter

145701
stoichiometry: 1.0
species: 478711
type: SpeciesReference

504149
kinetic law: 057567
notes: GENE_ASSOCIATION: b1528 PROTEIN_ASSOCIATION: SotB SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 057543
product: 057555
reactant: 057531
fast: false
type: Reaction
name: R_L_arabinose_transport_via_proton_antiport__periplasm_
reactant: 057519
reversible: false

039936
value: 0.0
type: LocalParameter

025426
units: 017602
value: 0.0
type: LocalParameter

218171
value: 0.0
type: LocalParameter

263324
units: 017602
value: 999999.0
type: LocalParameter

240292
units: 017602
value: 0.0
type: LocalParameter

469312
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_branching_glycogen_C6H10O5
type: Species

306120
value: 0.0
type: LocalParameter

089510
units: 017602
value: 0.296304
type: LocalParameter

501369
kinetic law: 040418
product: 040406
product: 040394
reactant: 040382
notes: GENE_ASSOCIATION: ( b0118 or b1276 ) PROTEIN_ASSOCIATION: ( AcnB ) or ( AcnA ) SUBSYSTEM: S_Citric_Acid_Cycle PROTEIN_CLASS: 4.2.1.3
fast: false
reversible: true
name: R_aconitase__half_reaction_A__Citrate_hydro_lyase_
type: Reaction

030355
units: 017602
value: 0.0
type: LocalParameter

124118
value: -0.04948
type: LocalParameter

108893
units: 017602
value: 0.0
type: LocalParameter

171874
units: 017602
value: 0.0
type: LocalParameter

280612
stoichiometry: 1.0
species: 488170
type: SpeciesReference

070040
units: 017602
value: 0.0
type: LocalParameter

228778
units: 017602
value: 0.0
type: LocalParameter

530186
product: 224581
reactant: 224555
name: R_nucleoside_diphosphate_kinase__ATPCDP_
type: Reaction
reactant: 224568
product: 224594
fast: false
reversible: true
notes: GENE_ASSOCIATION: ( b0474 or b2518 ) PROTEIN_ASSOCIATION: ( Adk ) or ( Ndk ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.7.4.6
kinetic law: 224606

089724
stoichiometry: 1.0
species: 472692
type: SpeciesReference

120555
stoichiometry: 1.0
species: 495750
type: SpeciesReference

076997
stoichiometry: 1.0
species: 471232
type: SpeciesReference

526327
product: 194430
name: R_Lactose_transport_via_proton_symport__periplasm_
fast: false
reactant: 194406
reversible: true
notes: GENE_ASSOCIATION: b0343 PROTEIN_ASSOCIATION: LacY SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
kinetic law: 194454
product: 194442
type: Reaction
reactant: 194418

137365
stoichiometry: 1.0
species: 478751
type: SpeciesReference

045528
units: 017602
value: 999999.0
type: LocalParameter

465632
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_acyl_carrier_protein_C11H21N2O7PRS
type: Species

084573
stoichiometry: 1.0
species: 478591
type: SpeciesReference

284561
stoichiometry: 1.0
species: 488850
type: SpeciesReference

060853
stoichiometry: 1.0
species: 478711
type: SpeciesReference

130686
units: 017602
value: 0.0
type: LocalParameter

288319
stoichiometry: 1.0
species: 489330
type: SpeciesReference

262509
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species: 486210
type: SpeciesReference

265085
stoichiometry: 1.0
species: 486591
type: SpeciesReference

538825
kinetic law: 280720
product: 280708
reactant: 280696
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_sulfate_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

249880
value: 0.0
type: LocalParameter

220743
units: 017602
value: 0.123296
type: LocalParameter

250482
stoichiometry: 1.0
species: 485451
type: SpeciesReference

161838
stoichiometry: 1.0
species: 467152
type: SpeciesReference

176786
stoichiometry: 1.0
species: 478591
type: SpeciesReference

212857
value: 0.0
type: LocalParameter

236706
units: 017602
value: 0.0
type: LocalParameter

168379
stoichiometry: 1.0
species: 483331
type: SpeciesReference

231832
units: 017602
value: 999999.0
type: LocalParameter

022528
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species: 462313
type: SpeciesReference

155461
units: 017602
value: 999999.0
type: LocalParameter

052496
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species: 462433
type: SpeciesReference

090316
value: -0.004657
type: LocalParameter

150509
units: 017602
value: 999999.0
type: LocalParameter

049670
stoichiometry: 1.0
species: 489830
type: SpeciesReference

305501
units: 017602
value: 0.0
type: LocalParameter

133631
stoichiometry: 0.007895
species: 482251
type: SpeciesReference

462153
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C160__C21H44NO7P1
type: Species

288983
units: 017602
value: 0.0
type: LocalParameter

506349
kinetic law: 071749
product: 071737
product: 071725
reactant: 071713
notes: GENE_ASSOCIATION: ( b1249 or b0789 ) PROTEIN_ASSOCIATION: ( Cls ) or ( YbhO ) SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_cardiolipin_synthase__periplasmic__n_C140_
type: Reaction

302775
stoichiometry: 1.0
species: 491990
type: SpeciesReference

266724
units: 017602
value: 0.0
type: LocalParameter

277447
units: 017602
value: 999999.0
type: LocalParameter

175540
units: 017602
value: 0.0
type: LocalParameter

027743
value: 0.0
type: LocalParameter

163963
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species: 477171
type: SpeciesReference

258433
stoichiometry: 1.0
species: 461013
type: SpeciesReference

163215
units: 017602
value: 0.0
type: LocalParameter

239019
units: 017602
value: 1.78E-4
type: LocalParameter

059374
value: -0.011642
type: LocalParameter

136505
units: 017602
value: 0.0
type: LocalParameter

190896
value: 0.0
type: LocalParameter

255785
stoichiometry: 1.0
species: 484271
type: SpeciesReference

293525
units: 017602
value: 0.0
type: LocalParameter

506348
kinetic law: 071639
product: 071627
product: 071615
reactant: 071603
notes: GENE_ASSOCIATION: ( b1249 or b0789 ) PROTEIN_ASSOCIATION: ( Cls ) or ( YbhO ) SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_cardiolipin_synthase__periplasmic__n_C120_
type: Reaction

065702
stoichiometry: 2.0
species: 478531
type: SpeciesReference

068057
units: 017602
value: 0.0
type: LocalParameter

221409
units: 017602
value: 999999.0
type: LocalParameter

227917
stoichiometry: 2.0
species: 478751
type: SpeciesReference

537546
product: 271948
notes: GENE_ASSOCIATION: b3029 PROTEIN_ASSOCIATION: YgiN SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS:
fast: false
kinetic law: 271960
type: Reaction
reactant: 271900
product: 271936
reactant: 271912
name: R_quinol_monooxygenase__menaquinol_8_
reversible: false
product: 271924

539085
type: Reaction
fast: false
reactant: 283844
product: 283868
notes: GENE_ASSOCIATION: ( ( b2422 and b2424 and b2423 and b3917 ) or ( b0763 and b0764 and b0765 ) or ( b2422 and b2425 and b2424 and b2423 ) ) PROTEIN_ASSOCIATION: ( CysA and CysU and CysW and Sbp ) or ( ModA and ModB and ModC ) or ( CysA and CysP and CysU and CysW ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
reactant: 283832
name: R_sulfate_transport_via_ABC_system__periplasm_
product: 283856
product: 283892
product: 283880
reactant: 283820
kinetic law: 283904
reversible: false

102121
units: 017602
value: 0.0
type: LocalParameter

497949
notes: GENE_ASSOCIATION: b4213 PROTEIN_ASSOCIATION: CpdB SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.4.16
product: 019612
reversible: false
kinetic law: 019624
reactant: 019588
type: Reaction
reactant: 019576
name: R_2__3__cyclic_nucleotide_phosphodiesterase__UMP___periplasm_
product: 019600
fast: false

145229
units: 017602
value: 0.0
type: LocalParameter

177736
units: 017602
value: 0.0
type: LocalParameter

160013
value: 0.0
type: LocalParameter

112833
units: 017602
value: 0.0
type: LocalParameter

141666
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species: 478591
type: SpeciesReference

095038
stoichiometry: 2.0
species: 478291
type: SpeciesReference

073726
stoichiometry: 2.0
species: 470912
type: SpeciesReference

063929
stoichiometry: 2.0
species: 478711
type: SpeciesReference

058436
units: 017602
value: 999999.0
type: LocalParameter

521847
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product: 166907
name: R_Glycine_betaine_transport_via_proton_symport__periplasm_
kinetic law: 166919
fast: false
reversible: false
notes: GENE_ASSOCIATION: b1801 PROTEIN_ASSOCIATION: YeaV SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reactant: 166883
type: Reaction
product: 166895

539086
kinetic law: 284000
product: 283988
reactant: 283976
notes: GENE_ASSOCIATION: b0954 PROTEIN_ASSOCIATION: FabA SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: true
name: R_trans_2_decenoyl_ACP_isomerase
type: Reaction

122970
stoichiometry: 1.0
species: 481051
type: SpeciesReference

280828
stoichiometry: 1.0
species: 488510
type: SpeciesReference

057483
value: 0.0
type: LocalParameter

019732
stoichiometry: 1.0
species: 478751
type: SpeciesReference

181970
units: 017602
value: 0.0
type: LocalParameter

197553
stoichiometry: 1.0
species: 478631
type: SpeciesReference

265773
stoichiometry: 1.0
species: 486510
type: SpeciesReference

210095
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027018
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species: 483391
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164168
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522607
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product: 171584
reversible: false
fast: false
product: 171596
type: Reaction
reactant: 171548
kinetic law: 171608
notes: GENE_ASSOCIATION: b2052 PROTEIN_ASSOCIATION: Fcl SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS:
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name: R_GDP_4_oxo_L_fucose_reductase

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initial concentration: NaN
initial amount: NaN
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initial concentration: NaN
initial amount: NaN
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159157
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127847
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107646
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048173
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121298
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474751
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
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156843
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153234
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species: 467132
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472672
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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species: 484950
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product: 117651
reactant: 117639
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
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229210
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038383
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082310
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184713
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139419
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298462
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256839
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species: 472392
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474072
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boundary condition: false
has only substance units: false
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initial amount: NaN
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204137
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077481
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type: LocalParameter

479411
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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species: 478751
type: SpeciesReference

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535726
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reactant: 260559
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reactant: 260571
reversible: false
product: 260607
product: 260595
product: 260583
fast: false

186849
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type: LocalParameter

123900
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type: LocalParameter

495729
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Hydrogen_peroxide_H2O2
type: Species

164458
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species: 477311
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226540
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species: 483411
type: SpeciesReference

472412
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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type: Species

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species: 474531
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052071
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285066
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type: LocalParameter

194249
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275786
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species: 474931
type: SpeciesReference

236042
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020553
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species: 462993
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species: 493230
type: SpeciesReference

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species: 495630
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species: 485830
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species: 463712
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269417
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166739
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species: 477591
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species: 478591
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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299877
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species: 491530
type: SpeciesReference

074617
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value: 999999.0
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112244
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296143
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type: LocalParameter

261609
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098581
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value: 0.120141
type: LocalParameter

249064
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value: -999999.0
type: LocalParameter

531786
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notes: GENE_ASSOCIATION: ( b4070 and b4071 and b4072 and b4073 ) PROTEIN_ASSOCIATION: NrfABCD SUBSYSTEM: S_Nitrogen_Metabolism PROTEIN_CLASS:
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reactant: 234964
reactant: 234952
product: 234988
reversible: false
type: Reaction
kinetic law: 235013
fast: false
product: 234976

054925
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species: 468232
type: SpeciesReference

170228
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type: LocalParameter

176325
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073750
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species: 470972
type: SpeciesReference

221820
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species: 482691
type: SpeciesReference

028420
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017747
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species: 460433
type: SpeciesReference

491430
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_UDP_D_glucuronate_C15H19N2O18P2
type: Species

495769
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
type: Species

266039
units: 017602
value: 999999.0
type: LocalParameter

197748
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value: 0.0
type: LocalParameter

526787
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kinetic law: 197467
type: Reaction
fast: false
product: 197442
reactant: 197406
name: R_Lysophospholipase_L1__2_acylglycerophosphoethanolamine__n_C140___periplasm_
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notes: GENE_ASSOCIATION: b0494 PROTEIN_ASSOCIATION: TesA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.5
product: 197455
reversible: false

040166
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species: 466752
type: SpeciesReference

142865
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value: 0.0
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063723
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value: 0.0
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271163
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type: LocalParameter

278768
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072817
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species: 470672
type: SpeciesReference

241377
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value: 999999.0
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095243
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value: 0.0
type: LocalParameter

517128
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product: 132666
reactant: 132653
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Xanthine_exchange
type: Reaction

293101
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value: -999999.0
type: LocalParameter

218741
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type: LocalParameter

116154
units: 017602
value: 0.0
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122766
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type: LocalParameter

514068
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product: 117844
reactant: 117832
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_Glucosamine_exchange
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species: 478711
type: SpeciesReference

297796
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species: 478591
type: SpeciesReference

211186
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species: 484071
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149232
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species: 475251
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species: 485211
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species: 470632
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202505
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222796
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species: 483411
type: SpeciesReference

480171
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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160710
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species: 476871
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151758
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species: 465632
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185890
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300446
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species: 467992
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236271
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174622
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084765
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value: 999999.0
type: LocalParameter

195736
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species: 478771
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061189
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type: LocalParameter

302087
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type: LocalParameter

460933
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
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506329
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product: 071494
kinetic law: 071530
reactant: 071481
fast: false
reactant: 071469
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product: 071518
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS:

244121
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species: 488134
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286724
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022107
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species: 478911
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121066
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value: 0.0
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033826
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species: 478531
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175312
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111229
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085338
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220707
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243999
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value: 0.0
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167860
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value: 999999.0
type: LocalParameter

497909
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kinetic law: 019406
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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reversible: false
reactant: 019358
fast: false
product: 019394

196981
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value: 0.0
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094081
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species: 486210
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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050606
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238813
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species: 464592
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251169
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261344
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084549
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205374
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212134
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504869
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type: Reaction
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product: 062166
reactant: 062118
reactant: 062142
name: R_L_aspartate_transport_via_ABC_system__periplasm_
reactant: 062130
product: 062154
kinetic law: 062202
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288102
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value: 999999.0
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290374
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species: 469232
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102829
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value: 999999.0
type: LocalParameter

112604
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species: 472272
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228302
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species: 483731
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120519
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086715
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value: 0.0
type: LocalParameter

476931
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_D_Gluconate_C6H11O7
type: Species

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
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type: Species

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value: 0.0
type: LocalParameter

087091
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species: 462733
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value: -999999.0
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291752
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species: 478711
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species: 460713
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057254
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species: 478591
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168566
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257217
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species: 484791
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101879
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species: 489010
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068240
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species: 470572
type: SpeciesReference

462193
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has only substance units: false
initial concentration: NaN
initial amount: NaN
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type: Species

532486
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reactant: 239226
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notes: GENE_ASSOCIATION: ( b2965 or b0693 ) PROTEIN_ASSOCIATION: ( SpeC ) or ( SpeF ) SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 4.1.1.17
name: R_Ornithine_Decarboxylase
reactant: 239238
type: Reaction
product: 239262
reversible: false
fast: false

209006
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type: LocalParameter

183587
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type: LocalParameter

206751
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species: 485830
type: SpeciesReference

197517
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158345
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value: 999999.0
type: LocalParameter

482611
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
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type: Species

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species: 478591
type: SpeciesReference

155668
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species: 488810
type: SpeciesReference

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species: 484071
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153915
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value: 999999.0
type: LocalParameter

165510
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species: 478711
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185685
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023833
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species: 485331
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242320
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249674
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species: 485530
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052641
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species: 483371
type: SpeciesReference

513648
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product: 115804
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_D_Fructose_exchange
type: Reaction

200492
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value: 0.0
type: LocalParameter

088471
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value: -999999.0
type: LocalParameter

094299
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species: 473252
type: SpeciesReference

483291
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Nicotinate_C6H4NO2
type: Species

035683
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species: 470692
type: SpeciesReference

197102
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465212
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_5_amino_1__5_phospho_D_ribosyl_imidazole_4_carboxylate_C9H11N3O9P
type: Species

079782
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type: LocalParameter

491010
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
type: Species

100094
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species: 489150
type: SpeciesReference

503489
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product: 053356
reversible: false
reactant: 053344
fast: false
name: R_Amylomaltase__maltotriose_
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kinetic law: 053380
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176991
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species: 478651
type: SpeciesReference

187903
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species: 483331
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108159
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species: 493330
type: SpeciesReference

222640
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species: 467132
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495170
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initial concentration: NaN
initial amount: NaN
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name: M_beta_D_Galactose_C6H12O6
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531246
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notes: GENE_ASSOCIATION: ( b0480 or b4055 ) PROTEIN_ASSOCIATION: ( UshA ) or ( AphA ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
product: 231434
reactant: 231398
reversible: false
product: 231422
name: R_5__nucleotidase__AMP_
reactant: 231410
fast: false
type: Reaction

027719
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value: -999999.0
type: LocalParameter

155016
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species: 485870
type: SpeciesReference

026079
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value: 0.0
type: LocalParameter

473532
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initial concentration: NaN
initial amount: NaN
in compartment: 460333
type: Species

540805
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product: 303148
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notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_L_valine_transport_via_diffusion__extracellular_to_periplasm_
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059338
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value: 999999.0
type: LocalParameter

227953
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value: 999999.0
type: LocalParameter

070270
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species: 484071
type: SpeciesReference

277253
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163939
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293331
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species: 467132
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529626
notes: GENE_ASSOCIATION: ( b0149 or b2519 or b3396 ) PROTEIN_ASSOCIATION: ( MrcB ) or ( PbpC ) or ( MrcA ) SUBSYSTEM: S_Murein_Biosynthesis PROTEIN_CLASS:
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fast: false
name: R_murein_polymerizing_transglycosylase_2__three_linked_units_
reactant: 219892
reactant: 219880
product: 219904
product: 219928
type: Reaction
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product: 219916

078169
stoichiometry: 1.0
species: 485830
type: SpeciesReference

297242
value: 0.0
type: LocalParameter

476111
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_D_Galactarate_C6H8O8
type: Species

037251
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species: 467132
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196375
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species: 477691
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301605
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species: 478591
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280865
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value: 999999.0
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239262
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species: 486870
type: SpeciesReference

514688
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product: 120845
reactant: 120833
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Hexadecanoate__n_C160__exchange
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096927
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species: 473912
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species: 478591
type: SpeciesReference

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type: LocalParameter

478471
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
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type: Species

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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species: 485770
type: SpeciesReference

228566
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species: 483691
type: SpeciesReference

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product: 305816
reactant: 305804
notes: GENE_ASSOCIATION: b3040 PROTEIN_ASSOCIATION: ZupT SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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reversible: false
name: R_zinc_transport_in_via_permease__no_H_
type: Reaction

296991
units: 017602
value: 999999.0
type: LocalParameter

519187
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product: 150473
reactant: 150461
reactant: 150449
notes: GENE_ASSOCIATION: ( b1612 or b4122 or b1611 ) PROTEIN_ASSOCIATION: ( FumA ) or ( FumB ) or ( FumCec ) SUBSYSTEM: S_Citric_Acid_Cycle PROTEIN_CLASS: 4.2.1.2
fast: false
reversible: true
name: R_fumarase
type: Reaction

021506
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species: 462013
type: SpeciesReference

218328
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species: 481771
type: SpeciesReference

047761
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species: 487310
type: SpeciesReference

288343
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species: 478711
type: SpeciesReference

230421
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type: LocalParameter

052046
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value: 999999.0
type: LocalParameter

221145
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species: 483151
type: SpeciesReference

111870
units: 017602
value: 999999.0
type: LocalParameter

188690
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type: LocalParameter

248296
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type: LocalParameter

129537
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type: LocalParameter

541086
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product: 305962
product: 305950
reactant: 305925
product: 305938
reversible: false
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product: 305974
reactant: 305913
reactant: 305901
kinetic law: 305986
fast: false

103346
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species: 478591
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174152
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species: 483371
type: SpeciesReference

106555
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type: LocalParameter

164872
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species: 477151
type: SpeciesReference

270602
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value: 0.0
type: LocalParameter

069400
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species: 469232
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056193
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species: 474272
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190315
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species: 478711
type: SpeciesReference

239479
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value: 0.0
type: LocalParameter

080926
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type: LocalParameter

471172
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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species: 469452
type: SpeciesReference

149449
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species: 475211
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species: 460613
type: SpeciesReference

156806
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type: LocalParameter

210775
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072381
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species: 470412
type: SpeciesReference

225053
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species: 472152
type: SpeciesReference

028963
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164192
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species: 469232
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262717
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127269
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053548
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076961
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152278
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value: 999999.0
type: LocalParameter

301821
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value: 999999.0
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137377
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species: 490490
type: SpeciesReference

185468
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type: LocalParameter

278416
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species: 486210
type: SpeciesReference

130698
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505549
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kinetic law: 066550
product: 066526
reactant: 066502
reversible: false
name: R_Cob_1_alamin_transport_via_ton_system__extermal_
type: Reaction
reactant: 066514

260655
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176774
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species: 478631
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250470
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species: 478591
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144539
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species: 485830
type: SpeciesReference

168343
stoichiometry: 1.0
species: 478711
type: SpeciesReference

236718
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037034
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species: 487010
type: SpeciesReference

516808
kinetic law: 131128
product: 131116
reactant: 131104
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_tetradecanoate__n_C140__exchange
type: Reaction

108376
units: 017602
value: 0.0
type: LocalParameter

487410
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_L_Rhamnulose_1_phosphate_C6H11O8P
type: Species

249892
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value: 0.0
type: LocalParameter

161802
value: 0.0
type: LocalParameter

031674
stoichiometry: 1.0
species: 478591
type: SpeciesReference

200273
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type: LocalParameter

235787
value: 0.0
type: LocalParameter

177917
stoichiometry: 1.0
species: 463893
type: SpeciesReference

265097
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species: 467132
type: SpeciesReference

274591
stoichiometry: 1.0
species: 478591
type: SpeciesReference

529407
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product: 218559
reactant: 218547
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_mannitol_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

148281
stoichiometry: 1.0
species: 475051
type: SpeciesReference

173267
stoichiometry: 2.0
species: 478251
type: SpeciesReference

083386
stoichiometry: 1.0
species: 469232
type: SpeciesReference

070053
units: 017602
value: 999999.0
type: LocalParameter

511928
kinetic law: 107483
product: 107470
reactant: 107458
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_4_Amino_4_deoxy_L_arabinose_modified_core_oligosaccharide_lipid_A_exchange
type: Reaction

133319
stoichiometry: 59.984
species: 469232
type: SpeciesReference

045708
stoichiometry: 1.0
species: 478631
type: SpeciesReference

287970
units: 017602
value: -999999.0
type: LocalParameter

483831
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
type: Species

513428
kinetic law: 114753
product: 114741
reactant: 114729
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Fe3_exchange
type: Reaction

159565
stoichiometry: 1.0
species: 476591
type: SpeciesReference

027043
stoichiometry: 1.0
species: 478631
type: SpeciesReference

492110
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Xanthosine_5__phosphate_C10H11N4O9P
type: Species

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_5_Methylthio_5_deoxy_D_ribulose_1_phosphate_C6H11O7PS
type: Species

240897
units: 017602
value: 999999.0
type: LocalParameter

243140
units: 017602
value: 999999.0
type: LocalParameter

292368
units: 017602
value: 0.0
type: LocalParameter

239043
stoichiometry: 1.0
species: 463373
type: SpeciesReference

280648
units: 017602
value: 999999.0
type: LocalParameter

089712
stoichiometry: 1.0
species: 467132
type: SpeciesReference

160290
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value: 0.0
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101169
units: 017602
value: 999999.0
type: LocalParameter

277471
units: 017602
value: 0.296304
type: LocalParameter

304131
stoichiometry: 1.0
species: 478591
type: SpeciesReference

039923
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value: 0.284212
type: LocalParameter

171886
units: 017602
value: 0.0
type: LocalParameter

523687
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product: 178207
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) PROTEIN_ASSOCIATION: ( FadB ) or ( FadJ ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.35
product: 178231
reactant: 178183
kinetic law: 178243
product: 178219
name: R_3_hydroxyacyl_CoA_dehydrogenase__3_oxohexadecanoyl_CoA_
type: Reaction
fast: false
reversible: false

478691
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Hydrogen_sulfide_H2S
type: Species

302580
value: 0.0
type: LocalParameter

254154
units: 017602
value: 999999.0
type: LocalParameter

185263
units: 017602
value: 0.0
type: LocalParameter

526967
type: Reaction
kinetic law: 198667
reversible: false
reactant: 198607
notes: GENE_ASSOCIATION: b0494 PROTEIN_ASSOCIATION: TesA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.5
name: R_Lysophospholipase_L1__2_acylglycerophosphoglycerol__n_C160___periplasm_
fast: false
product: 198655
product: 198631
reactant: 198619
product: 198643

038769
stoichiometry: 1.0
species: 487010
type: SpeciesReference

129319
value: 0.0
type: LocalParameter

117102
units: 017602
value: 999999.0
type: LocalParameter

115696
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species: 475032
type: SpeciesReference

275967
units: 017602
value: 0.0
type: LocalParameter

221698
stoichiometry: 1.0
species: 483571
type: SpeciesReference

026212
value: 0.0
type: LocalParameter

494510
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
type: Species

229938
value: 0.0
type: LocalParameter

046520
stoichiometry: 1.0
species: 467312
type: SpeciesReference

507708
reversible: false
reactant: 082527
product: 082551
notes: GENE_ASSOCIATION: b1623 PROTEIN_ASSOCIATION: Add SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS:
fast: false
kinetic law: 082563
reactant: 082502
name: R_Deoxyadenosine_deaminase
type: Reaction
reactant: 082514
product: 082539

219575
units: 017602
value: 999999.0
type: LocalParameter

058857
units: 017602
value: 999999.0
type: LocalParameter

124226
stoichiometry: 1.0
species: 481991
type: SpeciesReference

529406
product: 218460
product: 218448
name: R_mannitol_transport_via_PEPPyr_PTS__periplasm_
reactant: 218436
reactant: 218424
reversible: false
kinetic law: 218473
notes: GENE_ASSOCIATION: ( b3599 and b2415 and b2416 ) PROTEIN_ASSOCIATION: ( MtlA and PtsH and PtsI ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
type: Reaction
fast: false

184290
stoichiometry: 1.0
species: 479911
type: SpeciesReference

041992
units: 017602
value: 999999.0
type: LocalParameter

256623
units: 017602
value: 999999.0
type: LocalParameter

121760
units: 017602
value: 999999.0
type: LocalParameter

267912
stoichiometry: 1.0
species: 486651
type: SpeciesReference

293886
value: -0.009314
type: LocalParameter

021156
units: 017602
value: 0.0
type: LocalParameter

055731
stoichiometry: 2.0
species: 478711
type: SpeciesReference

266460
stoichiometry: 1.0
species: 485011
type: SpeciesReference

208095
value: 0.0
type: LocalParameter

239696
units: 017602
value: 0.0
type: LocalParameter

481691
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_D_Mannose_6_phosphate_C6H11O9P
type: Species

190534
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species: 483371
type: SpeciesReference

086293
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value: -999999.0
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288563
value: -0.004657
type: LocalParameter

206303
units: 017602
value: 0.0
type: LocalParameter

526567
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fast: false
type: Reaction
notes: GENE_ASSOCIATION: b0914 PROTEIN_ASSOCIATION: MsbA SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
product: 196002
reactant: 195954
reactant: 195978
product: 196014
reversible: false
kinetic law: 196038
product: 196026
name: R_lipid_A_transport_via_ABC_system__periplasm_
reactant: 195966

051269
value: 0.0
type: LocalParameter

191829
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species: 489030
type: SpeciesReference

145906
value: 0.0
type: LocalParameter

118605
stoichiometry: 1.0
species: 477171
type: SpeciesReference

536186
kinetic law: 263396
product: 263384
reactant: 263372
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_3_phenylpropionate_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

091853
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species: 478711
type: SpeciesReference

125196
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species: 482751
type: SpeciesReference

149665
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species: 475291
type: SpeciesReference

271705
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value: -999999.0
type: LocalParameter

041391
units: 017602
value: 999999.0
type: LocalParameter

491850
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Uridine_C9H12N2O6
type: Species

270688
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species: 486950
type: SpeciesReference

501969
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reversible: false
reactant: 043971
product: 043995
notes: GENE_ASSOCIATION: b3397 PROTEIN_ASSOCIATION: NudE SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.6.1.13
fast: false
reactant: 043983
product: 044019
name: R_ADPribose_diphosphatase
kinetic law: 044031
product: 044007

197966
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species: 475631
type: SpeciesReference

038551
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species: 466632
type: SpeciesReference

128642
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type: LocalParameter

275750
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species: 474951
type: SpeciesReference

211898
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type: LocalParameter

021950
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species: 469232
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236054
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species: 468632
type: SpeciesReference

123937
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species: 481791
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288770
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value: 999999.0
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100215
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species: 483391
type: SpeciesReference

521207
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type: Reaction
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kinetic law: 162878
notes: GENE_ASSOCIATION: ( ( b2417 and b1101 and b2415 and b2416 ) or ( b1817 and b1818 and b1819 and b2415 and b2416 ) or ( b2417 and b1621 and b2415 and b2416 ) ) PROTEIN_ASSOCIATION: ( Crr and PtsG and PtsH and PtsI ) or ( ManX and ManY and ManZ and PtsH and PtsI ) or ( Crr and MalX and PtsH and PtsI ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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reactant: 162830
reversible: false
name: R_D_glucose_transport_via_PEPPyr_PTS__periplasm_
product: 162866

471392
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Cu_Cu
type: Species

035056
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type: LocalParameter

204100
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species: 485830
type: SpeciesReference

226576
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value: 0.0
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227503
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species: 483671
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271584
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species: 487010
type: SpeciesReference

020589
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value: 999999.0
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164446
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species: 471632
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217930
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value: -999999.0
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281372
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127811
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species: 486350
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300228
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species: 475031
type: SpeciesReference

159145
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525727
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reactant: 190679
product: 190703
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type: Reaction
reversible: true
notes: GENE_ASSOCIATION: b3774 PROTEIN_ASSOCIATION: IlvCec SUBSYSTEM: S_Valine__Leucine__and_Isoleucine_Metabolism PROTEIN_CLASS: 1.1.1.86
kinetic law: 190715
product: 190691
reactant: 190654
fast: false

520887
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kinetic law: 161013
name: R_D_gluconate_transport_via_proton_symport__reversible__periplasm_
reactant: 160976
type: Reaction
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product: 161000
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138984
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type: LocalParameter

063503
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type: LocalParameter

085761
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species: 478711
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176545
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042305
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value: -999999.0
type: LocalParameter

479611
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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232607
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value: 0.0
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184701
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value: 0.0
type: LocalParameter

298498
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type: LocalParameter

146170
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139407
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type: LocalParameter

266256
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value: 999999.0
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172475
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species: 478631
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163493
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464272
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initial concentration: NaN
initial amount: NaN
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305393
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119370
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229246
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species: 485830
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038371
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type: LocalParameter

500709
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reactant: 036536
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fast: false
kinetic law: 036576
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 3.1.3.10
product: 036549
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121286
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030643
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150909
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species: 476371
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048185
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282221
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153222
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161194
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species: 485830
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095026
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species: 473352
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111446
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species: 494010
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235340
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species: 483811
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095676
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value: -999999.0
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210082
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146798
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177700
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species: 483351
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141630
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256417
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species: 485350
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212351
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067491
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089087
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032176
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species: 465332
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215031
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species: 482311
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180763
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038976
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species: 474271
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108605
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247410
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057471
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062106
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305513
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186836
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116166
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095231
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218753
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species: 478751
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149894
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211198
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species: 467132
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061177
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156600
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272104
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181101
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236283
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278900
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074400
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reactant: 193157
product: 193182
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value: -999999.0
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300434
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229951
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118813
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initial concentration: NaN
initial amount: NaN
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reactant: 283674
reactant: 283698
product: 283710
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type: Reaction
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019708
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species: 478711
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reactant: 097422
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reactant: 097410
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132148
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213813
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species: 482031
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212339
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220453
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221832
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151162
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species: 475451
type: SpeciesReference

072805
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species: 470652
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515848
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product: 126466
reactant: 126454
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_octadecanoate__n_C180__exchange
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040154
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type: LocalParameter

278756
units: 017602
value: 0.0
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271151
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value: 0.0
type: LocalParameter

017735
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176337
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value: 0.0
type: LocalParameter

487990
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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228314
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472692
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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species: 478631
type: SpeciesReference

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boundary condition: false
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initial amount: NaN
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538406
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product: 277289
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290362
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514468
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product: 119783
reactant: 119771
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_Oxidized_glutathione_exchange
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086703
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272393
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057242
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species: 469232
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225391
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species: 483431
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type: LocalParameter

168578
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247201
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039305
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species: 491270
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183575
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138477
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type: LocalParameter

465872
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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boundary condition: false
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initial amount: NaN
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068252
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209018
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reactant: 262008
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111217
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505109
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reactant: 063675
product: 063687
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185039
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518507
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kinetic law: 146134
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species: 483951
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085326
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250458
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type: LocalParameter

501949
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reactant: 043863
fast: false
reversible: false
reactant: 043851

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has only substance units: false
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initial amount: NaN
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238801
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277241
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522927
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notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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227941
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504429
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notes: GENE_ASSOCIATION: ( b2415 and b2416 and b4195 and b4194 and b4193 ) PROTEIN_ASSOCIATION: ( PtsH and PtsI and SgaA and SgaB and SgaT ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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product: 059302
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078157
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species: 478711
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297254
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042667
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280853
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095460
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155655
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196363
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537346
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023821
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217207
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species: 485830
type: SpeciesReference

076756
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197529
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090753
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158357
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501129
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type: Reaction
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product: 039012
reactant: 038988
reversible: true
fast: false
reactant: 038976

296288
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value: 999999.0
type: LocalParameter

495750
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boundary condition: true
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type: Species

529426
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product: 218656
reactant: 218644
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reversible: false
name: R_D_mannonate_hydrolyase
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506928
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reactant: 076744
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reactant: 076732
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product: 076756
kinetic law: 076792
type: Reaction
product: 076780

144309
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292596
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species: 490250
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185673
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value: -14.032428
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143493
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062334
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188400
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type: LocalParameter

022320
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type: LocalParameter

197114
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100082
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species: 483351
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476311
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initial amount: NaN
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112809
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reactant: 076865
product: 076901
product: 076913
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type: Reaction
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reactant: 076877

522807
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reactant: 172861
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notes: GENE_ASSOCIATION: b3449 PROTEIN_ASSOCIATION: UgpQ SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.4.46
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reactant: 172873
name: R_Glycerophosphodiester_phosphodiesterase__Glycerophosphoinositol_
product: 172910
type: Reaction
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species: 478591
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056181
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species: 468712
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501349
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product: 040286
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notes: GENE_ASSOCIATION: b1519 PROTEIN_ASSOCIATION: Tam SUBSYSTEM: S_Unassigned PROTEIN_CLASS:
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reversible: false

164884
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species: 478591
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292380
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value: 0.0
type: LocalParameter

226348
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150921
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103333
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species: 474771
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256851
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species: 478751
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156818
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210787
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498669
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149437
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065133
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species: 485830
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154896
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539646
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notes: GENE_ASSOCIATION: b0417 PROTEIN_ASSOCIATION: ThiL SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.7.4.16
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initial concentration: NaN
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262705
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type: LocalParameter

483851
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045720
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initial amount: NaN
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species: 467132
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species: 467132
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species: 464512
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239250
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species: 488990
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267706
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021518
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539645
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product: 290771
notes: GENE_ASSOCIATION: b1106 PROTEIN_ASSOCIATION: ThiK SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.7.1.89
kinetic law: 290807
product: 290783
fast: false
reversible: false
reactant: 290758
reactant: 290746
product: 290795

128209
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species: 496649
type: SpeciesReference

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value: 999999.0
type: LocalParameter

032608
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value: 0.0
type: LocalParameter

052058
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type: LocalParameter

479851
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_L_Isoleucine_C6H13NO2
type: Species

254385
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value: 0.0
type: LocalParameter

124432
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species: 496169
type: SpeciesReference

111882
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type: LocalParameter

221133
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type: LocalParameter

272946
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species: 485830
type: SpeciesReference

053560
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type: LocalParameter

230433
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species: 472212
type: SpeciesReference

288331
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species: 467132
type: SpeciesReference

174140
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species: 478251
type: SpeciesReference

180326
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038539
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species: 478751
type: SpeciesReference

080913
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value: 999999.0
type: LocalParameter

129549
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species: 488430
type: SpeciesReference

106567
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value: 6.69682
type: LocalParameter

173255
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species: 478091
type: SpeciesReference

538846
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kinetic law: 280973
type: Reaction
reversible: false
product: 280949
fast: false
reactant: 280925
notes: GENE_ASSOCIATION: b1584 PROTEIN_ASSOCIATION: SpeG SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 2.3.1.57
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reactant: 280913
product: 280961

203168
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value: 0.0
type: LocalParameter

070065
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type: LocalParameter

306144
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type: LocalParameter

025402
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species: 489050
type: SpeciesReference

218195
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type: LocalParameter

022540
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species: 462298
type: SpeciesReference

240885
units: 017602
value: 0.0
type: LocalParameter

159577
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species: 476611
type: SpeciesReference

083398
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species: 467132
type: SpeciesReference

251838
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species: 485870
type: SpeciesReference

287982
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value: 999999.0
type: LocalParameter

027031
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species: 464732
type: SpeciesReference

133619
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species: 482031
type: SpeciesReference

036095
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species: 467132
type: SpeciesReference

039911
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type: LocalParameter

304143
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species: 492170
type: SpeciesReference

171898
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030379
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type: LocalParameter

186206
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value: 0.0
type: LocalParameter

280636
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value: -999999.0
type: LocalParameter

227723
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species: 483731
type: SpeciesReference

120531
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101157
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value: 0.0
type: LocalParameter

461953
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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type: Species

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species: 486210
type: SpeciesReference

148293
stoichiometry: 1.0
species: 478751
type: SpeciesReference

176978
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type: LocalParameter

185251
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type: LocalParameter

060877
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species: 470632
type: SpeciesReference

150702
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species: 475391
type: SpeciesReference

537566
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product: 272080
kinetic law: 272092
reactant: 272032
reversible: false
product: 272068
fast: false
name: R_quinolinate_synthase
notes: GENE_ASSOCIATION: b0750 PROTEIN_ASSOCIATION: NadA SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 272044
type: Reaction

144526
stoichiometry: 1.0
species: 478711
type: SpeciesReference

076973
units: 017602
value: 0.0
type: LocalParameter

267294
stoichiometry: 1.0
species: 467432
type: SpeciesReference

185456
units: 017602
value: 999999.0
type: LocalParameter

137389
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species: 468052
type: SpeciesReference

278404
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species: 468052
type: SpeciesReference

108388
units: 017602
value: 999999.0
type: LocalParameter

031662
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species: 469232
type: SpeciesReference

109319
stoichiometry: 1.0
species: 493570
type: SpeciesReference

462873
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_2_Dehydropantoate_C6H9O4
type: Species

499089
kinetic law: 026176
product: 026164
product: 026152
reactant: 026140
notes: GENE_ASSOCIATION: ( b0180 or b0954 ) PROTEIN_ASSOCIATION: ( FabZ ) or ( FabA ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 4.2.1.61
fast: false
reversible: false
name: R_3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C181_
type: Reaction

504649
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product: 060757
reactant: 060745
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_arsenite_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

176762
value: 0.0
type: LocalParameter

161814
units: 017602
value: 0.0
type: LocalParameter

473392
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_fused_thioldisulfide_interchange_protein__oxidized__X
type: Species

168355
stoichiometry: 1.0
species: 483351
type: SpeciesReference

260667
units: 017602
value: 0.0
type: LocalParameter

510988
type: Reaction
reactant: 102649
product: 102661
reversible: false
fast: false
name: R_Endotoxin_Synthesis__palmitoleoyl_ACP_
reactant: 102637
product: 102673
kinetic law: 102685
notes: GENE_ASSOCIATION: b2378 PROTEIN_ASSOCIATION: LpxP SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:

212833
units: 017602
value: -999999.0
type: LocalParameter

073313
units: 017602
value: -999999.0
type: LocalParameter

177929
stoichiometry: 1.0
species: 483331
type: SpeciesReference

525187
product: 187441
product: 187429
name: R_L_isoleucine_transport_via_ABC_system__periplasm_
reactant: 187417
type: Reaction
reactant: 187392
product: 187453
kinetic law: 187477
reversible: false
product: 187465
fast: false
reactant: 187404
notes: GENE_ASSOCIATION: ( b3454 and b3455 and b3457 and b3460 and b3456 ) PROTEIN_ASSOCIATION: ( LivF and LivG and LivH and LivJ and LivM ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:

514248
kinetic law: 118727
product: 118715
reactant: 118703
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Glutamate_exchange
type: Reaction

200285
units: 017602
value: 0.0
type: LocalParameter

235775
units: 017602
value: 999999.0
type: LocalParameter

133306
stoichiometry: 0.2411
species: 469112
type: SpeciesReference

486030
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Propionate__n_C30__C3H5O2
type: Species

504169
kinetic law: 057664
product: 057652
reactant: 057640
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_arabinose_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

191211
stoichiometry: 1.0
species: 466132
type: SpeciesReference

190546
stoichiometry: 1.0
species: 467732
type: SpeciesReference

517567
fast: false
product: 138816
type: Reaction
reactant: 138804
reversible: true
product: 138828
product: 138840
notes: GENE_ASSOCIATION: b0356 PROTEIN_ASSOCIATION: FrmA SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
name: R_formaldehyde_dehydrogenase
kinetic law: 138852
reactant: 138792

191816
stoichiometry: 1.0
species: 466132
type: SpeciesReference

206315
value: 0.244954
type: LocalParameter

288551
units: 017602
value: 0.0
type: LocalParameter

083181
units: 017602
value: 0.0
type: LocalParameter

530166
reactant: 224311
notes: GENE_ASSOCIATION: ( b0474 or b2518 ) PROTEIN_ASSOCIATION: ( Adk ) or ( Ndk ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.7.4.6
name: R_nucleoside_diphosphate_kinase__ATPGDP_
product: 224347
fast: false
kinetic law: 224359
type: Reaction
reversible: true
product: 224335
reactant: 224323

064353
stoichiometry: 1.0
species: 483331
type: SpeciesReference

051256
units: 017602
value: 0.0
type: LocalParameter

495150
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_alpha_D_Galactose_1_phosphate_C6H11O9P
type: Species

069630
units: 017602
value: 999999.0
type: LocalParameter

091841
stoichiometry: 1.0
species: 461893
type: SpeciesReference

063942
stoichiometry: 1.0
species: 483351
type: SpeciesReference

138028
stoichiometry: 1.0
species: 470692
type: SpeciesReference

030161
stoichiometry: 1.0
species: 464532
type: SpeciesReference

221686
stoichiometry: 2.0
species: 478711
type: SpeciesReference

275979
value: 0.0
type: LocalParameter

026200
units: 017602
value: 999999.0
type: LocalParameter

038757
stoichiometry: 1.0
species: 466492
type: SpeciesReference

115684
value: 0.0
type: LocalParameter

058845
units: 017602
value: 0.0
type: LocalParameter

498889
kinetic law: 025100
product: 025088
reactant: 025076
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_3CMP_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

254167
value: 0.0
type: LocalParameter

111664
units: 017602
value: 0.0
type: LocalParameter

124214
value: 0.0
type: LocalParameter

098569
value: 0.0
type: LocalParameter

239031
value: 0.0
type: LocalParameter

219563
units: 017602
value: -999999.0
type: LocalParameter

121772
value: 0.0
type: LocalParameter

293874
units: 017602
value: 0.0
type: LocalParameter

166751
stoichiometry: 1.0
species: 467132
type: SpeciesReference

472432
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_dGDP_C10H12N5O10P2
type: Species

482631
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Molybdate_MoO4
type: Species

256635
value: 0.0
type: LocalParameter

085774
stoichiometry: 1.0
species: 478591
type: SpeciesReference

159132
value: 0.0
type: LocalParameter

208083
units: 017602
value: 999999.0
type: LocalParameter

021168
units: 017602
value: 999999.0
type: LocalParameter

063515
stoichiometry: 1.0
species: 467132
type: SpeciesReference

138996
units: 017602
value: 0.0
type: LocalParameter

487770
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_D_Serine_C3H7NO3
type: Species

176557
units: 017602
value: 0.0
type: LocalParameter

300216
stoichiometry: 1.0
species: 490790
type: SpeciesReference

072369
stoichiometry: 1.0
species: 478711
type: SpeciesReference

127823
stoichiometry: 1.0
species: 496569
type: SpeciesReference

531926
kinetic law: 235848
product: 235836
reactant: 235823
notes: GENE_ASSOCIATION: b2037 PROTEIN_ASSOCIATION: WzxB SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
fast: false
reversible: false
name: R_O16_antigen__flippase__cytoplasm_to_periplasm_
type: Reaction

281383
units: 017602
value: 999999.0
type: LocalParameter

042317
units: 017602
value: 999999.0
type: LocalParameter

232619
units: 017602
value: 999999.0
type: LocalParameter

518088
kinetic law: 143202
product: 143190
reactant: 143177
reactant: 143165
notes: GENE_ASSOCIATION: s0001 PROTEIN_ASSOCIATION: SPONTANEOUS SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_Fe_III__hydroxamate_Fe_loading_reaction__spontaneaous_
type: Reaction

172463
stoichiometry: 1.0
species: 475811
type: SpeciesReference

305381
units: 017602
value: 999999.0
type: LocalParameter

068469
value: -0.009314
type: LocalParameter

298486
value: 0.0
type: LocalParameter

146182
units: 017602
value: 0.0
type: LocalParameter

266244
units: 017602
value: -999999.0
type: LocalParameter

121274
units: 017602
value: 999999.0
type: LocalParameter

061394
stoichiometry: 1.0
species: 482691
type: SpeciesReference

048197
units: 017602
value: -0.356786
type: LocalParameter

518087
product: 143069
reactant: 143009
fast: false
product: 143045
reversible: false
type: Reaction
product: 143081
notes: GENE_ASSOCIATION: ( b0153 and b0151 and b0152 ) PROTEIN_ASSOCIATION: ( FhuB and FhuC and FhuD ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
reactant: 143021
kinetic law: 143093
name: R_ferric_dicitrate_transport_via_ABC_system__periplasm_
product: 143057
reactant: 143033

119382
stoichiometry: 1.0
species: 477791
type: SpeciesReference

229234
stoichiometry: 1.0
species: 492090
type: SpeciesReference

270676
stoichiometry: 1.0
species: 483431
type: SpeciesReference

102529
stoichiometry: 1.0
species: 483111
type: SpeciesReference

197954
stoichiometry: 1.0
species: 478631
type: SpeciesReference

149677
stoichiometry: 1.0
species: 475311
type: SpeciesReference

271717
units: 017602
value: 999999.0
type: LocalParameter

096216
stoichiometry: 1.0
species: 491690
type: SpeciesReference

209731
value: 0.0
type: LocalParameter

128654
units: 017602
value: 0.0
type: LocalParameter

530167
notes: GENE_ASSOCIATION: ( b0474 or b2518 ) PROTEIN_ASSOCIATION: ( Adk ) or ( Ndk ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.7.4.6
reactant: 224432
reversible: true
product: 224468
fast: false
type: Reaction
name: R_nucleoside_diphosphate_kinase__ATPUDP_
reactant: 224444
product: 224456
kinetic law: 224480

265506
stoichiometry: 1.0
species: 478711
type: SpeciesReference

052205
units: 017602
value: 999999.0
type: LocalParameter

100227
stoichiometry: 1.0
species: 489150
type: SpeciesReference

211886
units: 017602
value: 0.001908
type: LocalParameter

042100
units: 017602
value: -999999.0
type: LocalParameter

520187
product: 156552
name: R_galactokinase
notes: GENE_ASSOCIATION: ( b0757 or b2045 ) PROTEIN_ASSOCIATION: ( GalK ) or ( WcaK ) SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 2.7.1.6
type: Reaction
product: 156540
kinetic law: 156576
reactant: 156528
reactant: 156516
product: 156564
fast: false
reversible: true

194225
stoichiometry: 1.0
species: 480711
type: SpeciesReference

123925
value: 0.0
type: LocalParameter

236066
stoichiometry: 1.0
species: 491270
type: SpeciesReference

288782
value: 0.0
type: LocalParameter

164434
stoichiometry: 1.0
species: 469232
type: SpeciesReference

275762
stoichiometry: 1.0
species: 478311
type: SpeciesReference

227515
stoichiometry: 1.0
species: 478711
type: SpeciesReference

271572
stoichiometry: 1.0
species: 478711
type: SpeciesReference

035044
units: 017602
value: 999999.0
type: LocalParameter

020577
units: 017602
value: 0.0
type: LocalParameter

510568
product: 100251
name: R_enoyl_acyl_carrier_protein_reductase__NADPH___n_C60_
reactant: 100215
product: 100239
kinetic law: 100263
reactant: 100203
fast: false
reversible: false
notes: GENE_ASSOCIATION: b1288 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.3.1.10
reactant: 100227
type: Reaction

521827
fast: false
kinetic law: 166799
type: Reaction
product: 166775
product: 166751
reversible: false
reactant: 166739
name: R_Glycine_betaine_transport_via_ABC_system__periplasm_
reactant: 166714
product: 166763
reactant: 166727
notes: GENE_ASSOCIATION: ( b2128 and b2129 and b2130 and b2131 ) PROTEIN_ASSOCIATION: ( YehW and YehX and YehY and YehZ ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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062118
stoichiometry: 1.0
species: 469232
type: SpeciesReference

515628
kinetic law: 125414
product: 125402
reactant: 125390
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Sodium_exchange
type: Reaction

302799
units: 017602
value: 0.0
type: LocalParameter

305525
stoichiometry: 1.0
species: 469232
type: SpeciesReference

266749
value: 0.0
type: LocalParameter

049694
stoichiometry: 1.0
species: 468052
type: SpeciesReference

289623
stoichiometry: 1.0
species: 489590
type: SpeciesReference

065726
stoichiometry: 1.0
species: 483951
type: SpeciesReference

132364
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species: 491810
type: SpeciesReference

255761
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species: 462273
type: SpeciesReference

474052
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_D_erythro_1__Imidazol_4_yl_glycerol_3_phosphate_C6H9N2O6P
type: Species

197309
stoichiometry: 1.0
species: 475631
type: SpeciesReference

293549
stoichiometry: 1.0
species: 490410
type: SpeciesReference

063736
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value: 999999.0
type: LocalParameter

068033
units: 017602
value: 999999.0
type: LocalParameter

186824
units: 017602
value: 0.0
type: LocalParameter

521427
kinetic law: 164240
product: 164228
reactant: 164204
type: Reaction
notes: GENE_ASSOCIATION: b0242 PROTEIN_ASSOCIATION: ProB SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 2.7.2.11
reactant: 164192
fast: false
reversible: false
name: R_glutamate_5_kinase
product: 164216

155876
stoichiometry: 1.0
species: 478751
type: SpeciesReference

258457
stoichiometry: 1.0
species: 484211
type: SpeciesReference

514048
kinetic law: 117759
product: 117747
reactant: 117735
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_Glucosamine_6_phosphate_exchange
type: Reaction

244518
stoichiometry: 1.0
species: 486950
type: SpeciesReference

136529
value: 0.0
type: LocalParameter

059350
value: 0.0
type: LocalParameter

511388
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product: 104866
reactant: 104854
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_2__3__Cyclic_GMP_exchange
type: Reaction

113484
stoichiometry: 1.0
species: 494430
type: SpeciesReference

210070
value: 0.0
type: LocalParameter

095688
units: 017602
value: 999999.0
type: LocalParameter

235352
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species: 491090
type: SpeciesReference

526347
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product: 194562
kinetic law: 194586
fast: false
reactant: 194526
reversible: true
notes: GENE_ASSOCIATION: ( b2133 or b1380 ) PROTEIN_ASSOCIATION: ( Dld ) or ( Ldh ) SUBSYSTEM: S_Pyruvate_Metabolism PROTEIN_CLASS: 1.1.1.28
product: 194574
type: Reaction
name: R_D_lactate_dehydrogenase
product: 194550

145205
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species: 487390
type: SpeciesReference

495749
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Hydrogen_sulfide_H2S
type: Species

491450
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_UDP_D_glucuronate_C15H19N2O18P2
type: Species

465652
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boundary condition: false
has only substance units: false
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initial amount: NaN
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226962
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531046
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172499
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171668
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064905
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508588
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240643
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213283
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138016
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509748
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044464
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216299
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518967
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079539
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524107
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511108
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281347
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name: R_Methionyl_tRNA_formyltransferase
reactant: 147763
fast: false
kinetic law: 147811
reversible: false
product: 147775
type: Reaction
product: 147799
product: 147787
notes: GENE_ASSOCIATION: b3288 PROTEIN_ASSOCIATION: Fmt SUBSYSTEM: S_tRNA_Charging PROTEIN_CLASS: 2.1.2.9

218729
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value: 0.0
type: LocalParameter

276626
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species: 488550
type: SpeciesReference

057001
stoichiometry: 1.0
species: 468732
type: SpeciesReference

499689
reactant: 030137
fast: false
type: Reaction
product: 030161
reactant: 030125
reactant: 030149
kinetic law: 030197
product: 030173
notes: GENE_ASSOCIATION: ( b1095 or b2323 ) PROTEIN_ASSOCIATION: ( FabF ) or ( FabB ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.3.1.41
product: 030185
reversible: false
name: R_3_oxoacyl_acyl_carrier_protein_synthase__n_C180_

148015
stoichiometry: 1.0
species: 474991
type: SpeciesReference

138234
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species: 468052
type: SpeciesReference

127884
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value: 0.0
type: LocalParameter

165702
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species: 486210
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174829
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species: 478711
type: SpeciesReference

280660
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type: LocalParameter

086945
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species: 469232
type: SpeciesReference

125666
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050835
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type: LocalParameter

047473
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species: 483371
type: SpeciesReference

159941
stoichiometry: 1.0
species: 478591
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199827
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species: 477651
type: SpeciesReference

170703
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269224
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value: -999999.0
type: LocalParameter

060817
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value: 0.0
type: LocalParameter

076214
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value: 999999.0
type: LocalParameter

287122
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species: 489490
type: SpeciesReference

087078
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species: 478751
type: SpeciesReference

098181
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value: 0.0
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509968
kinetic law: 096348
notes: GENE_ASSOCIATION: ( b2393 or b2964 ) PROTEIN_ASSOCIATION: ( NupCec ) or ( NupG ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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product: 096324
reactant: 096312
reversible: false
type: Reaction
reactant: 096300
name: R_deoxyuridine_transport_in_via_proton_symport__periplasm_
product: 096336

157170
units: 017602
value: 999999.0
type: LocalParameter

485051
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
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species: 489270
type: SpeciesReference

220647
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species: 482391
type: SpeciesReference

112099
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type: LocalParameter

257020
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value: 999999.0
type: LocalParameter

252977
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type: LocalParameter

165906
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type: LocalParameter

227749
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species: 478631
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203723
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216078
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species: 483051
type: SpeciesReference

286978
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226504
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species: 478591
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163697
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species: 468052
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298294
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035888
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198182
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096903
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156069
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048402
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species: 478711
type: SpeciesReference

213861
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value: 999999.0
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189347
units: 017602
value: 2.22E-4
type: LocalParameter

504109
type: Reaction
fast: false
product: 057314
product: 057290
reversible: false
reactant: 057254
reactant: 057242
kinetic law: 057326
notes: GENE_ASSOCIATION: ( b1901 and b1900 and b4460 ) PROTEIN_ASSOCIATION: ( AraF and AraG and AraH ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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reactant: 057266
product: 057278
name: R_L_arabinose_transport_via_ABC_system__periplasm_

141353
stoichiometry: 1.0
species: 478751
type: SpeciesReference

540046
kinetic law: 295758
product: 295746
reactant: 295734
notes: GENE_ASSOCIATION: b3786 PROTEIN_ASSOCIATION: WecB SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 5.1.3.14
fast: false
reversible: true
name: R_UDP_N_acetylglucosamine_2_epimerase
type: Reaction

101819
value: 0.0
type: LocalParameter

062178
stoichiometry: 1.0
species: 478711
type: SpeciesReference

301629
stoichiometry: 1.0
species: 491750
type: SpeciesReference

249296
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species: 478591
type: SpeciesReference

094843
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value: 0.0
type: LocalParameter

160964
stoichiometry: 1.0
species: 476971
type: SpeciesReference

512288
kinetic law: 109234
product: 109222
reactant: 109210
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_Aerobactin_exchange
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195506
units: 017602
value: 0.0
type: LocalParameter

255592
value: 0.0
type: LocalParameter

540045
reactant: 295601
reactant: 295589
name: R_UDP_N_acetyl_D_mannosamine_oxidoreductase
reversible: false
kinetic law: 295661
product: 295649
fast: false
reactant: 295613
product: 295625
notes: GENE_ASSOCIATION: b3787 PROTEIN_ASSOCIATION: WecC SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS:
type: Reaction
product: 295637

471192
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Cytosine_C4H5N3O
type: Species

054988
units: 017602
value: 0.0
type: LocalParameter

034815
units: 017602
value: 999999.0
type: LocalParameter

206063
stoichiometry: 1.0
species: 481351
type: SpeciesReference

277277
stoichiometry: 1.0
species: 487630
type: SpeciesReference

049633
value: -0.015833
type: LocalParameter

142026
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value: 0.0
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169782
stoichiometry: 1.0
species: 478711
type: SpeciesReference

214210
stoichiometry: 1.0
species: 482071
type: SpeciesReference

065762
units: 017602
value: 999999.0
type: LocalParameter

293355
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species: 485830
type: SpeciesReference

245305
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type: LocalParameter

485050
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_phosphatidylethanolamine__ditetradecanoyl__n_C140__C33H66N1O8P1
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124299
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value: 0.0
type: LocalParameter

244974
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value: 999999.0
type: LocalParameter

291195
value: 0.0
type: LocalParameter

057700
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type: LocalParameter

214815
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species: 482251
type: SpeciesReference

047967
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species: 467412
type: SpeciesReference

094275
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value: 0.0
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241144
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species: 467132
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251109
stoichiometry: 1.0
species: 485870
type: SpeciesReference

101603
value: 0.0
type: LocalParameter

519587
reactant: 152835
product: 152859
name: R_glycerol_3_phosphate_dehydrogenase__ubiquinone_8_
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kinetic law: 152883
reactant: 152847
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fast: false
product: 152871
reversible: false

120580
units: 017602
value: -999999.0
type: LocalParameter

477251
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_L_Glutamate_5_phosphate_C5H8NO7P
type: Species

145035
stoichiometry: 2.0
species: 474352
type: SpeciesReference

286531
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species: 483331
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525527
product: 189407
notes: GENE_ASSOCIATION: b0029 PROTEIN_ASSOCIATION: LytB SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reactant: 189383
reactant: 189395
product: 189431
name: R_1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate_reductase__ipdp_
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reversible: false
product: 189419
kinetic law: 189443
type: Reaction

278998
stoichiometry: 1.0
species: 465832
type: SpeciesReference

050400
units: 017602
value: 0.0
type: LocalParameter

131526
units: 017602
value: 0.0
type: LocalParameter

133823
stoichiometry: 0.003948
species: 488190
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233470
stoichiometry: 1.0
species: 472232
type: SpeciesReference

493510
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_L_Arabinose_C5H10O5
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119819
units: 017602
value: 999999.0
type: LocalParameter

231640
stoichiometry: 1.0
species: 472492
type: SpeciesReference

022332
units: 017602
value: 999999.0
type: LocalParameter

185661
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type: LocalParameter

181934
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value: 0.0
type: LocalParameter

057459
units: 017602
value: 0.0
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248453
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type: LocalParameter

257890
stoichiometry: 1.0
species: 485051
type: SpeciesReference

265967
stoichiometry: 1.0
species: 487170
type: SpeciesReference

097662
value: -0.003027
type: LocalParameter

249698
units: 017602
value: 0.0
type: LocalParameter

040551
units: 017602
value: 999999.0
type: LocalParameter

303269
stoichiometry: 1.0
species: 491930
type: SpeciesReference

059181
stoichiometry: 1.0
species: 478711
type: SpeciesReference

468452
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_acyl_phosphatidylglycerol__n_C161__C54H98O11P
type: Species

178279
value: 0.0
type: LocalParameter

196568
value: 0.0
type: LocalParameter

086511
stoichiometry: 1.0
species: 478591
type: SpeciesReference

206775
units: 017602
value: 0.0
type: LocalParameter

480191
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Isethionic_acid_C2H5O4S
type: Species

503649
product: 054369
reactant: 054321
product: 054357
product: 054345
notes: GENE_ASSOCIATION: b3994 PROTEIN_ASSOCIATION: ThiC SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 054309
fast: false
reversible: false
name: R_4_amino_2_methyl_5_phosphomethylpyrimidine_synthetase
type: Reaction
reactant: 054297
product: 054333
kinetic law: 054381

173873
stoichiometry: 1.0
species: 488250
type: SpeciesReference

269646
value: 0.0
type: LocalParameter

068857
units: 017602
value: 0.0
type: LocalParameter

486990
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Pyridoxine_C8H11NO3
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290350
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value: 0.0
type: LocalParameter

531266
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reactant: 231531
kinetic law: 231567
product: 231543
product: 231555
notes: GENE_ASSOCIATION: ( b2291 or b2744 ) PROTEIN_ASSOCIATION: ( YfbR ) or ( SurE ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
type: Reaction
reactant: 231519
reversible: false
fast: false

086739
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species: 472272
type: SpeciesReference

232363
value: 0.0
type: LocalParameter

092072
units: 017602
value: 0.0
type: LocalParameter

187964
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value: 0.0
type: LocalParameter

228326
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species: 483671
type: SpeciesReference

169070
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species: 482711
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151915
units: 017602
value: 999999.0
type: LocalParameter

540485
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product: 300603
product: 300591
reactant: 300579
notes: GENE_ASSOCIATION: b3804 PROTEIN_ASSOCIATION: HemDec SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 4.2.1.75
fast: false
reversible: false
name: R_uroporphyrinogen_III_synthase
type: Reaction

059900
value: -0.009314
type: LocalParameter

495990
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
type: Species

043839
value: 0.0
type: LocalParameter

239201
units: 017602
value: 0.0
type: LocalParameter

475531
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_sn_Glycero_3_phosphocholine_C8H20NO6P
type: Species

239491
value: -0.011642
type: LocalParameter

495789
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Hexadecanoate__n_C160__C16H31O2
type: Species

186291
stoichiometry: 1.0
species: 479751
type: SpeciesReference

533146
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reactant: 243551
kinetic law: 243600
name: R_Phosphatidate_phosphatase__n_C181_
reactant: 243563
fast: false
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product: 243576
reversible: false

186437
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species: 483371
type: SpeciesReference

066708
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value: 999999.0
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193061
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species: 466712
type: SpeciesReference

116798
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018290
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type: LocalParameter

498429
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reactant: 022236
notes: GENE_ASSOCIATION: b2836 PROTEIN_ASSOCIATION: Aas SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.3.1.40
reversible: false
fast: false
product: 022296
name: R_2_acyl_glycerophospho_ethanolamine_acyltransferase__n_C180_
product: 022284
reactant: 022248
type: Reaction
kinetic law: 022308
reactant: 022260

109124
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species: 493530
type: SpeciesReference

069462
stoichiometry: 1.0
species: 478711
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145750
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value: 999999.0
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225585
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079987
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140193
units: 017602
value: 0.0
type: LocalParameter

020517
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value: 0.0
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290578
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value: 0.0
type: LocalParameter

286748
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type: LocalParameter

148720
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species: 462913
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043369
units: 017602
value: -999999.0
type: LocalParameter

037094
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type: LocalParameter

127208
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value: 0.0
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035455
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species: 466072
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085567
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value: 999999.0
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195712
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species: 478871
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054031
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305913
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species: 478591
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177471
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279941
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species: 467132
type: SpeciesReference

121965
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type: LocalParameter

522647
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product: 171826
product: 171850
fast: false
reactant: 171801
product: 171838
reversible: false
kinetic law: 171862
notes: GENE_ASSOCIATION: b3449 PROTEIN_ASSOCIATION: UgpQ SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.4.46

253901
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type: LocalParameter

150533
units: 017602
value: 2.411752
type: LocalParameter

155413
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species: 475971
type: SpeciesReference

272116
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value: 999999.0
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110080
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species: 469692
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244542
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value: 0.0
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046797
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value: 0.0
type: LocalParameter

287557
units: 017602
value: 0.0
type: LocalParameter

474032
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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301007
units: 017602
value: 999999.0
type: LocalParameter

461113
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
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type: Species

075838
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species: 478591
type: SpeciesReference

476911
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
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236514
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species: 483991
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160735
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species: 470692
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190375
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value: 999999.0
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297772
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value: 0.0
type: LocalParameter

196122
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species: 480911
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205822
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species: 481231
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078699
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species: 478711
type: SpeciesReference

516608
kinetic law: 130154
product: 130142
reactant: 130130
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Thiamin_exchange
type: Reaction

046580
value: 0.0
type: LocalParameter

028444
stoichiometry: 1.0
species: 464532
type: SpeciesReference

295505
stoichiometry: 1.0
species: 490930
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271187
stoichiometry: 1.0
species: 486950
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173007
stoichiometry: 1.0
species: 478631
type: SpeciesReference

540646
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reactant: 301869
product: 301893
name: R_Uridine_hydrolase
product: 301905
type: Reaction
notes: GENE_ASSOCIATION: ( b2162 or b0651 or b0030 ) PROTEIN_ASSOCIATION: ( RihB ) or ( RihA ) or ( RihC ) SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 3.2.2.8
reversible: false
reactant: 301881
fast: false

276039
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species: 473872
type: SpeciesReference

142841
units: 017602
value: 999999.0
type: LocalParameter

036549
stoichiometry: 1.0
species: 466412
type: SpeciesReference

158818
value: -0.00163
type: LocalParameter

051428
stoichiometry: 1.0
species: 467932
type: SpeciesReference

469572
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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type: Species

272799
stoichiometry: 1.0
species: 474991
type: SpeciesReference

090995
units: 017602
value: 999999.0
type: LocalParameter

484471
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Ornithine_C5H13N2O2
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241887
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value: 0.0
type: LocalParameter

508368
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product: 086643
product: 086655
reversible: false
notes: GENE_ASSOCIATION: ( b2964 or b2393 ) PROTEIN_ASSOCIATION: ( NupG ) or ( NupCec ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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type: Reaction
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reactant: 086619
name: R_deoxycytidine_transport_in_via_proton_symport__periplasm_

056385
stoichiometry: 2.0
species: 478711
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500209
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product: 033536
type: Reaction
reactant: 033524
product: 033560
reactant: 033512
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notes: GENE_ASSOCIATION: ( b2836 and b1094 ) PROTEIN_ASSOCIATION: ( Aas and AcpP ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 6.2.1.20
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name: R_acyl_acyl_carrier_protein_synthetase___n_C100_
kinetic law: 033572
reactant: 033500

540645
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reactant: 301761
product: 301785
kinetic law: 301797
reactant: 301749
fast: false
name: R_uridylate_kinase__dUMP_
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notes: GENE_ASSOCIATION: b0171 PROTEIN_ASSOCIATION: PyrHec SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS:

120011
units: 017602
value: 999999.0
type: LocalParameter

496729
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boundary condition: true
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initial concentration: NaN
initial amount: NaN
in compartment: 460293
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type: Species

181704
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species: 479151
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025040
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283662
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209524
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species: 471452
type: SpeciesReference

496749
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_L_Leucine_C6H13NO2
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value: 0.0
type: LocalParameter

180775
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type: LocalParameter

044320
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type: LocalParameter

093732
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species: 495829
type: SpeciesReference

236956
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071469
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species: 470552
type: SpeciesReference

032164
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220913
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species: 478711
type: SpeciesReference

464432
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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value: 0.0
type: LocalParameter

245173
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type: LocalParameter

467952
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
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product: 097578
reactant: 097542
product: 097590
notes: GENE_ASSOCIATION: b1288 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.3.1.10
fast: false
reversible: false
kinetic law: 097602
reactant: 097554
type: Reaction

534526
product: 252929
product: 252905
product: 252892
reactant: 252880
reactant: 252856
product: 252917
reversible: false
name: R_protoheme_transport_via_ABC_system__periplasm_
notes: GENE_ASSOCIATION: ( b2201 and b2200 and b2199 ) PROTEIN_ASSOCIATION: ( CcmA and CcmB and CcmC ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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fast: false
reactant: 252868
kinetic law: 252941

185649
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value: 999999.0
type: LocalParameter

300835
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species: 486210
type: SpeciesReference

206546
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type: LocalParameter

236742
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species: 470692
type: SpeciesReference

079758
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value: 0.0
type: LocalParameter

127437
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species: 496509
type: SpeciesReference

082818
units: 017602
value: 0.0
type: LocalParameter

065971
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species: 467032
type: SpeciesReference

261887
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species: 486170
type: SpeciesReference

119831
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050690
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type: LocalParameter

273816
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species: 487330
type: SpeciesReference

285247
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value: 0.0
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072525
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value: -999999.0
type: LocalParameter

113460
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type: LocalParameter

303972
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type: LocalParameter

525967
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notes: GENE_ASSOCIATION: b3198 PROTEIN_ASSOCIATION: YrbI SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS: 3.1.3.45
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fast: false
kinetic law: 192203
type: Reaction
reactant: 192167
product: 192179
reactant: 192155

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value: 0.0
type: LocalParameter

209210
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value: 999999.0
type: LocalParameter

100928
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value: 0.0
type: LocalParameter

123309
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value: 999999.0
type: LocalParameter

194756
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value: 0.0
type: LocalParameter

261307
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value: 999999.0
type: LocalParameter

020721
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type: LocalParameter

152035
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value: 999999.0
type: LocalParameter

036536
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species: 478631
type: SpeciesReference

040767
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species: 484990
type: SpeciesReference

246994
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208021
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type: LocalParameter

030391
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type: LocalParameter

226950
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type: LocalParameter

170995
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type: LocalParameter

061610
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species: 469112
type: SpeciesReference

537066
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reactant: 268921
notes: GENE_ASSOCIATION: b4055 PROTEIN_ASSOCIATION: AphA SUBSYSTEM: S_Threonine_and_Lysine_Metabolism PROTEIN_CLASS:
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reactant: 268909
fast: false
reversible: false
product: 268945
kinetic law: 268957
product: 268933

025462
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value: 0.16407
type: LocalParameter

139179
units: 017602
value: 999999.0
type: LocalParameter

080494
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species: 478711
type: SpeciesReference

507548
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reactant: 081529
product: 081565
notes: GENE_ASSOCIATION: ( b2162 or b0651 or b0030 ) PROTEIN_ASSOCIATION: ( RihB ) or ( RihA ) or ( RihC ) SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 3.2.2.8
fast: false
type: Reaction
reactant: 081541
name: R_Cytidine_hydrolase
product: 081553
kinetic law: 081577

279881
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type: LocalParameter

247944
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species: 485370
type: SpeciesReference

066091
stoichiometry: 1.0
species: 478711
type: SpeciesReference

224347
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species: 478311
type: SpeciesReference

099122
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type: LocalParameter

176532
units: 017602
value: 999999.0
type: LocalParameter

257230
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species: 461293
type: SpeciesReference

039973
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species: 465932
type: SpeciesReference

094408
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species: 473292
type: SpeciesReference

283432
stoichiometry: 1.0
species: 478591
type: SpeciesReference

255012
units: 017602
value: 0.0
type: LocalParameter

029192
units: 017602
value: 0.0
type: LocalParameter

257008
units: 017602
value: 0.0
type: LocalParameter

142464
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type: LocalParameter

268539
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species: 487830
type: SpeciesReference

148453
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value: 999999.0
type: LocalParameter

233035
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type: LocalParameter

047039
units: 017602
value: 0.0
type: LocalParameter

042124
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294720
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species: 478751
type: SpeciesReference

033886
units: 017602
value: 999999.0
type: LocalParameter

164410
units: 017602
value: 0.0
type: LocalParameter

156662
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species: 476051
type: SpeciesReference

511788
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product: 106796
reactant: 106784
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_N_Acetyl_D_galactosamine_1_phosphate_exchange
type: Reaction

209755
value: 0.0
type: LocalParameter

093852
units: 017602
value: 0.0
type: LocalParameter

239929
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type: LocalParameter

202793
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type: LocalParameter

264139
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type: LocalParameter

213270
stoichiometry: 1.0
species: 469232
type: SpeciesReference

159325
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species: 476572
type: SpeciesReference

465672
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate_D_alanine_C18H30N5O9
type: Species

057991
stoichiometry: 1.0
species: 478751
type: SpeciesReference

028214
stoichiometry: 1.0
species: 464092
type: SpeciesReference

259908
value: 0.0
type: LocalParameter

464872
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_4_Amino_5_hydroxymethyl_2_methylpyrimidine_C6H9N3O
type: Species

135303
units: 017602
value: 0.0
type: LocalParameter

491470
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
type: Species

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stoichiometry: 1.0
species: 490830
type: SpeciesReference

262546
units: 017602
value: 999999.0
type: LocalParameter

521407
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reversible: true
name: R_Galactitol_1_phosphate_dehydrogenase
product: 164108
product: 164084
fast: false
type: Reaction
reactant: 164072
notes: GENE_ASSOCIATION: b2091 PROTEIN_ASSOCIATION: GatD SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
kinetic law: 164120
product: 164096

150328
stoichiometry: 1.0
species: 475371
type: SpeciesReference

518307
kinetic law: 144660
product: 144648
reactant: 144636
reactant: 144624
notes: GENE_ASSOCIATION: s0001 PROTEIN_ASSOCIATION: SPONTANEOUS SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_ferrichrome_Fe_III__loading_reaction__spontaneous_
type: Reaction

172487
stoichiometry: 1.0
species: 477691
type: SpeciesReference

163481
units: 017602
value: 0.0
type: LocalParameter

030101
units: 017602
value: 0.120141
type: LocalParameter

064917
stoichiometry: 1.0
species: 469512
type: SpeciesReference

528086
type: Reaction
fast: false
kinetic law: 207393
reactant: 207356
reversible: false
notes: GENE_ASSOCIATION: ( b2417 and b1621 and b2415 and b2416 ) PROTEIN_ASSOCIATION: ( Crr and MalX and PtsH and PtsI ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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reactant: 207344
product: 207369
product: 207381

463353
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_2_Octaprenyl_6_methoxyphenol_C47H72O2
type: Species

486550
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_L_Proline_C5H9NO2
type: Species

515228
kinetic law: 123477
product: 123465
reactant: 123453
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Maltohexaose_exchange
type: Reaction

039583
stoichiometry: 1.0
species: 474271
type: SpeciesReference

065339
stoichiometry: 1.0
species: 469572
type: SpeciesReference

235580
stoichiometry: 1.0
species: 483931
type: SpeciesReference

112653
units: 017602
value: 999999.0
type: LocalParameter

244313
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type: LocalParameter

228592
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value: 0.0
type: LocalParameter

528087
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product: 207477
reactant: 207465
notes: GENE_ASSOCIATION: b4036 PROTEIN_ASSOCIATION: LamB SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
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reversible: false
name: R_maltoseMaltotriose_transport_via_diffusion__extracellular_to_periplasm__irreversible
type: Reaction

195942
value: -0.143899
type: LocalParameter

243382
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value: 999999.0
type: LocalParameter

463352
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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type: Species

240655
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species: 484691
type: SpeciesReference

046352
units: 017602
value: 999999.0
type: LocalParameter

085798
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species: 483431
type: SpeciesReference

109560
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type: LocalParameter

171452
stoichiometry: 1.0
species: 467132
type: SpeciesReference

256659
value: 0.0
type: LocalParameter

113255
units: 017602
value: 0.0
type: LocalParameter

266496
units: 017602
value: 999999.0
type: LocalParameter

178982
units: 017602
value: 0.0
type: LocalParameter

178291
units: 017602
value: 0.0
type: LocalParameter

172271
units: 017602
value: 0.0
type: LocalParameter

267900
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species: 478711
type: SpeciesReference

034213
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value: 999999.0
type: LocalParameter

237196
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species: 484331
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_L_Aspartate_C4H6NO4
type: Species

538206
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kinetic law: 276075
fast: false
type: Reaction
product: 276051
product: 276063
reactant: 276015
product: 276039
notes: GENE_ASSOCIATION: ( ( b0684 and b3924 and b4238 and b4237 ) or ( b2895 and b4238 ) or ( b0684 and b4238 ) or ( b2895 and b3924 and b4238 and b4237 ) ) PROTEIN_ASSOCIATION: ( FldA and Fpr and NrdD and NrdG ) or ( FldB and NrdD ) or ( FldA and NrdD ) or ( FldB and Fpr and NrdD and NrdG ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS:
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reactant: 276027

474571
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_Fe_III_hydroxamate_C9H18O6N3Fe
type: Species

118885
value: -0.010944
type: LocalParameter

025028
units: 017602
value: 999999.0
type: LocalParameter

069014
stoichiometry: 2.0
species: 467992
type: SpeciesReference

203361
stoichiometry: 1.0
species: 462493
type: SpeciesReference

134525
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type: LocalParameter

018437
stoichiometry: 1.0
species: 460653
type: SpeciesReference

516088
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product: 127629
reactant: 127617
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Propanal_exchange
type: Reaction

487930
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Siroheme_C42H36FeN4O16
type: Species

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value: 0.0
type: LocalParameter

087284
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species: 462733
type: SpeciesReference

186885
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species: 474052
type: SpeciesReference

102589
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value: 999999.0
type: LocalParameter

533926
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product: 248940
reactant: 248927
notes: GENE_ASSOCIATION: ( b3612 or b4395 or b0755 ) PROTEIN_ASSOCIATION: ( YibO ) or ( GpmB ) or ( GpmA ) SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 5.4.2.1
fast: false
reversible: true
name: R_phosphoglycerate_mutase
type: Reaction

275955
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value: 0.0
type: LocalParameter

038733
value: 0.0
type: LocalParameter

063966
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value: 0.0
type: LocalParameter

299136
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value: 0.0
type: LocalParameter

127678
value: 0.0
type: LocalParameter

485850
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
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type: Species

097434
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species: 489090
type: SpeciesReference

108195
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value: 999999.0
type: LocalParameter

138004
value: 0.0
type: LocalParameter

220206
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value: -999999.0
type: LocalParameter

020963
units: 017602
value: 0.0
type: LocalParameter

130855
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value: 999999.0
type: LocalParameter

487250
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_Reduced_riboflavin_C17H22N4O6
type: Species

173020
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species: 477691
type: SpeciesReference

461973
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
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type: Species

252745
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species: 470572
type: SpeciesReference

223839
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236223
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species: 483911
type: SpeciesReference

115901
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species: 494930
type: SpeciesReference

242092
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177039
units: 017602
value: 999999.0
type: LocalParameter

044476
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species: 467392
type: SpeciesReference

524807
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fast: false
name: R_Hydrogenase__Demethylmenaquinone_8_2_protons___periplasm_
type: Reaction
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reactant: 185178
product: 185203
notes: GENE_ASSOCIATION: ( ( b0972 and b0973 and b0974 ) or ( b2994 and b2997 ) ) PROTEIN_ASSOCIATION: ( HyaA ) or ( HybC ) SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS: 1.18.99.1
product: 185190
reactant: 185152
reactant: 185165

523167
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product: 175240
product: 175252
reversible: false
kinetic law: 175264
type: Reaction
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product: 175228
notes: GENE_ASSOCIATION: b3779 PROTEIN_ASSOCIATION: GppA SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 3.6.1.40
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105708
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type: LocalParameter

058689
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species: 478711
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192434
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species: 470632
type: SpeciesReference

102373
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value: 0.0
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185051
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species: 482691
type: SpeciesReference

122934
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199127
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type: LocalParameter

149111
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species: 475191
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286760
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species: 478531
type: SpeciesReference

235799
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265737
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species: 483251
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175360
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species: 468052
type: SpeciesReference

209960
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173644
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species: 478171
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212182
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species: 481931
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026849
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value: 999999.0
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234405
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species: 472572
type: SpeciesReference

118169
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value: 999999.0
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088312
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species: 472592
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187005
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species: 478711
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144502
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species: 467132
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value: 999999.0
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126810
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type: LocalParameter

145265
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value: 0.0
type: LocalParameter

177772
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type: LocalParameter

083922
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species: 478751
type: SpeciesReference

229976
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species: 473852
type: SpeciesReference

479451
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 460333
type: Species

193376
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value: 0.0
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047737
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species: 478591
type: SpeciesReference

265253
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value: -999999.0
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284097
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species: 478711
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216091
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species: 482971
type: SpeciesReference

163251
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value: 0.0
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495130
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
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type: Species

135912
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species: 489110
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251314
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species: 478631
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211658
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species: 483371
type: SpeciesReference

511548
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product: 105636
reactant: 105624
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_3__GMP_exchange
type: Reaction

532426
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product: 238849
reversible: false
kinetic law: 238861
fast: false
name: R_Octaprenyl_hydroxybenzoate_decarboxylase
type: Reaction
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product: 238837
notes: GENE_ASSOCIATION: ( b3843 or b2311 ) PROTEIN_ASSOCIATION: ( UbiD ) or ( UbiX ) SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:

302593
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species: 467432
type: SpeciesReference

070089
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502569
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product: 047641
notes: GENE_ASSOCIATION: ( b0572 and b0573 and b0574 and b0575 ) PROTEIN_ASSOCIATION: CusCFBA SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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reversible: false
type: Reaction
product: 047629
kinetic law: 047653
name: R_silver_transport_out_via_proton_antiport
reactant: 047605

083374
stoichiometry: 1.0
species: 460493
type: SpeciesReference

517587
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product: 138936
reactant: 138924
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_formaldehyde_transport_via_diffusion__extracellular_to_periplasm_
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039377
stoichiometry: 1.0
species: 474272
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203144
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species: 478851
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172078
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090146
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027924
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species: 478711
type: SpeciesReference

486010
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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species: 469232
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099794
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049200
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227736
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060805
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076202
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199839
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species: 478711
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kinetic law: 267536
notes: GENE_ASSOCIATION: b4388 PROTEIN_ASSOCIATION: SerB SUBSYSTEM: S_Glycine_and_Serine_Metabolism PROTEIN_CLASS: 3.1.3.3
product: 267524
name: R_phosphoserine_phosphatase__L_serine_
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product: 267511
reactant: 267499
reversible: false
reactant: 267487

112087
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value: 0.0
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220659
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221157
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species: 483171
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287110
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157182
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202348
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472852
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initial amount: NaN
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boundary condition: false
has only substance units: false
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initial amount: NaN
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295300
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203711
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529446
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notes: GENE_ASSOCIATION: b2392 PROTEIN_ASSOCIATION: MntH SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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reactant: 218753
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reversible: false
fast: false
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species: 474412
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252965
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495770
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initial amount: NaN
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156057
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096915
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213873
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189359
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298282
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265301
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537366
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reversible: false
reactant: 270787
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product: 270823
product: 270811
product: 270799
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272544
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species: 478631
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517848
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type: Reaction
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name: R_iron__Fe2__transport_out_via_proton_antiport__periplasm_
kinetic law: 141389
reactant: 141341
fast: false
reactant: 141353
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259497
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286965
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491250
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boundary condition: false
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initial amount: NaN
in compartment: 460313
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483091
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 460313
type: Species

198195
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304760
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119542
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187221
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512908
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product: 112220
reactant: 112207
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
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057013
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species: 478751
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179929
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214646
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081878
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241131
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086957
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species: 466192
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125654
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490810
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initial amount: NaN
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159953
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species: 464752
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127896
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113039
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type: LocalParameter

148003
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050847
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095219
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138222
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124166
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076419
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species: 476551
type: SpeciesReference

508028
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product: 084477
reactant: 084464
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reversible: true
name: R_diaminopimelate_epimerase
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498869
kinetic law: 025003
product: 024991
reactant: 024979
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_3AMP_transport_via_diffusion__extracellular_to_periplasm_
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192654
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094287
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type: LocalParameter

522047
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reactant: 168052
product: 168088
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kinetic law: 168100
notes: GENE_ASSOCIATION: b3124 PROTEIN_ASSOCIATION: GarK SUBSYSTEM: S_Glycine_and_Serine_Metabolism PROTEIN_CLASS: 2.7.1.31
reactant: 168040
fast: false
product: 168064
type: Reaction

517367
product: 136068
reversible: false
fast: false
product: 136080
reactant: 136044
reactant: 136032
name: R_fatty_acid_CoA_thioesterase__hexadecanoate_
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kinetic law: 136092
type: Reaction
notes: GENE_ASSOCIATION: b0452 PROTEIN_ASSOCIATION: TesB SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS:

120592
units: 017602
value: 999999.0
type: LocalParameter

047955
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type: LocalParameter

231652
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species: 478631
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156202
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species: 476151
type: SpeciesReference

511328
kinetic law: 104587
product: 104575
reactant: 104563
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_1_5_Diaminopentane_exchange
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214803
stoichiometry: 1.0
species: 478711
type: SpeciesReference

034610
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type: LocalParameter

131538
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value: 999999.0
type: LocalParameter

145047
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species: 474991
type: SpeciesReference

470552
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
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type: Species

224691
stoichiometry: 1.0
species: 473592
type: SpeciesReference

286543
stoichiometry: 1.0
species: 483391
type: SpeciesReference

105924
stoichiometry: 1.0
species: 492810
type: SpeciesReference

532646
reversible: false
reactant: 240220
product: 240244
kinetic law: 240268
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reactant: 240208
product: 240232
type: Reaction
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133811
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species: 487930
type: SpeciesReference

265955
stoichiometry: 1.0
species: 469232
type: SpeciesReference

248465
stoichiometry: 1.0
species: 475831
type: SpeciesReference

039158
units: 017602
value: 0.0
type: LocalParameter

097650
units: 017602
value: 0.0
type: LocalParameter

517368
reactant: 136177
name: R_fatty_acid_CoA_thioesterase__hexadecenoate_
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product: 136214
reactant: 136165
notes: GENE_ASSOCIATION: b0452 PROTEIN_ASSOCIATION: TesB SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS:
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fast: false
type: Reaction
kinetic law: 136226
product: 136202

517847
fast: false
notes: GENE_ASSOCIATION: b2392 PROTEIN_ASSOCIATION: MntH SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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reactant: 141220
reactant: 141232
product: 141244
reversible: false
name: R_iron__II__transport_in_via_proton_symport__periplasm_
type: Reaction
product: 141256

304541
units: 017602
value: 0.0
type: LocalParameter

196556
units: 017602
value: 999999.0
type: LocalParameter

193593
units: 017602
value: 0.0
type: LocalParameter

233483
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species: 478591
type: SpeciesReference

022345
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197505
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type: LocalParameter

301617
stoichiometry: 1.0
species: 483951
type: SpeciesReference

160952
value: 0.0
type: LocalParameter

503209
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reactant: 051671
kinetic law: 051707
product: 051683
reversible: false
type: Reaction
reactant: 051659
name: R_allantoinase
product: 051695
notes: GENE_ASSOCIATION: b0512 PROTEIN_ASSOCIATION: AllB SUBSYSTEM: S_Nitrogen_Metabolism PROTEIN_CLASS: 3.5.2.5

141341
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species: 474352
type: SpeciesReference

515688
kinetic law: 125704
product: 125691
reactant: 125678
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Ni2_exchange
type: Reaction

142014
value: 0.0
type: LocalParameter

169794
stoichiometry: 1.0
species: 480511
type: SpeciesReference

214222
stoichiometry: 1.0
species: 467132
type: SpeciesReference

495550
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_D_Glyceraldehyde_C3H6O3
type: Species

065750
units: 017602
value: 0.0
type: LocalParameter

293343
stoichiometry: 1.0
species: 478711
type: SpeciesReference

536126
reactant: 262985
kinetic law: 263033
type: Reaction
reactant: 262997
product: 263021
reversible: false
notes: GENE_ASSOCIATION: b3850 PROTEIN_ASSOCIATION: HemG SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 1.3.3.4
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product: 263009
fast: false

049621
units: 017602
value: 0.0
type: LocalParameter

034827
value: 0.0
type: LocalParameter

277265
value: -0.011642
type: LocalParameter

206075
stoichiometry: 1.0
species: 466472
type: SpeciesReference

124287
value: 0.0
type: LocalParameter

272333
stoichiometry: 1.0
species: 487130
type: SpeciesReference

254360
stoichiometry: 1.0
species: 490490
type: SpeciesReference

244986
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117380
units: 017602
value: 0.0
type: LocalParameter

532206
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product: 237414
reactant: 237402
notes: GENE_ASSOCIATION: b3846 PROTEIN_ASSOCIATION: FadB SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 5.3.3.8
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reversible: false
name: R_Octadecenoyl_coa_cis_trans_isomerization
type: Reaction

080060
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species: 478711
type: SpeciesReference

148733
stoichiometry: 1.0
species: 475391
type: SpeciesReference

109112
stoichiometry: 1.0
species: 468692
type: SpeciesReference

020504
value: 0.0
type: LocalParameter

539806
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product: 292828
reactant: 292804
kinetic law: 292864
reversible: false
product: 292840
product: 292852

186425
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species: 479751
type: SpeciesReference

495350
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initial concentration: NaN
initial amount: NaN
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501189
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reactant: 039353
kinetic law: 039389
product: 039365
type: Reaction
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notes: GENE_ASSOCIATION: b0221 PROTEIN_ASSOCIATION: FadE SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.3.99.3
reactant: 039341
product: 039377
reversible: true

069474
stoichiometry: 1.0
species: 485830
type: SpeciesReference

130409
value: -0.046802
type: LocalParameter

225597
units: 017602
value: 0.0
type: LocalParameter

275508
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species: 473732
type: SpeciesReference

529866
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kinetic law: 221385
notes: GENE_ASSOCIATION: b3957 PROTEIN_ASSOCIATION: ArgE SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS:
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product: 221373
product: 221361
reactant: 221337
reversible: false

090365
stoichiometry: 1.0
species: 478711
type: SpeciesReference

228110
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value: 0.0
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290566
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value: 0.0
type: LocalParameter

140181
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180557
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species: 475831
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113680
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species: 494470
type: SpeciesReference

072309
units: 017602
value: -999999.0
type: LocalParameter

477991
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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type: Species

173861
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species: 478251
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068845
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269658
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287910
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type: LocalParameter

181509
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type: LocalParameter

092084
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type: LocalParameter

182189
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value: 0.0
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164630
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species: 470632
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497489
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initial concentration: NaN
initial amount: NaN
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467732
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initial amount: NaN
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282852
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species: 487090
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232351
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019310
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032380
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type: LocalParameter

086727
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503949
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name: R_aerobactin_reductase
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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product: 056217
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product: 056241
product: 056229
product: 056205

186000
units: 017602
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151927
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271175
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142853
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174128
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species: 483391
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121979
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028432
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type: LocalParameter

463572
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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276027
stoichiometry: 1.0
species: 491910
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093016
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species: 478591
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120024
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211430
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species: 478591
type: SpeciesReference

159108
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value: 0.0
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054780
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241899
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value: 999999.0
type: LocalParameter

074605
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073094
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051416
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056373
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species: 474991
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272787
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181716
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033668
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species: 484291
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209536
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species: 481951
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163039
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518527
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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product: 146266
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reactant: 146218
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021108
value: 0.0
type: LocalParameter

174610
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type: LocalParameter

035443
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304970
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305925
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species: 492450
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195724
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177483
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155425
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species: 475991
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272128
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188906
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253913
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150545
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137510
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514448
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
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301019
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236526
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species: 483951
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110092
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species: 493730
type: SpeciesReference

539805
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name: R_tryptophan_synthase__indoleglycerol_phosphate_
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208244
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078687
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species: 490330
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205810
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species: 481211
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529206
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product: 217352
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name: R_Maltodextrin_phosphorylase__maltohexaose_
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297784
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249077
units: 017602
value: 999999.0
type: LocalParameter

474791
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Fe_enterobactin_C30H27FeN3O15
type: Species

496529
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Propionate__n_C30__C3H5O2
type: Species

538426
reversible: false
type: Reaction
fast: false
kinetic law: 277423
reactant: 277375
name: R_succinyl_diaminopimelate_desuccinylase
product: 277399
reactant: 277387
notes: GENE_ASSOCIATION: b2472 PROTEIN_ASSOCIATION: DapE SUBSYSTEM: S_Threonine_and_Lysine_Metabolism PROTEIN_CLASS: 3.5.1.18
product: 277411

190387
value: 0.0
type: LocalParameter

482851
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
type: Species

133150
stoichiometry: 1.0
species: 497549
type: SpeciesReference

064929
stoichiometry: 1.0
species: 478711
type: SpeciesReference

046991
stoichiometry: 1.0
species: 484950
type: SpeciesReference

272995
value: 0.0
type: LocalParameter

126394
units: 017602
value: 0.0
type: LocalParameter

526927
reversible: false
reactant: 198353
name: R_Lysophospholipase_L1__2_acylglycerophosphoglycerol__n_C140___periplasm_
product: 198377
fast: false
product: 198365
reactant: 198340
product: 198390
type: Reaction
kinetic law: 198402
notes: GENE_ASSOCIATION: b0494 PROTEIN_ASSOCIATION: TesA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.5

032356
value: 0.0
type: LocalParameter

179941
units: 017602
value: 999999.0
type: LocalParameter

030113
value: 0.0
type: LocalParameter

112640
units: 017602
value: 0.0
type: LocalParameter

290338
value: 0.0
type: LocalParameter

528766
kinetic law: 214586
product: 214574
reactant: 214562
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_magnesium__Mg2__transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

482891
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
type: Species

171644
value: 0.0
type: LocalParameter

262534
units: 017602
value: 0.0
type: LocalParameter

078893
units: 017602
value: 999999.0
type: LocalParameter

043501
units: 017602
value: 0.0
type: LocalParameter

120797
value: 0.0
type: LocalParameter

159929
stoichiometry: 1.0
species: 476751
type: SpeciesReference

244349
stoichiometry: 1.0
species: 487010
type: SpeciesReference

072333
value: 0.0
type: LocalParameter

092580
stoichiometry: 1.0
species: 467992
type: SpeciesReference

046340
units: 017602
value: 0.0
type: LocalParameter

127859
units: 017602
value: 999999.0
type: LocalParameter

243394
value: 0.0
type: LocalParameter

137787
units: 017602
value: 0.0
type: LocalParameter

535906
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fast: false
type: Reaction
reactant: 261633
product: 261645
kinetic law: 261681
notes: GENE_ASSOCIATION: b3403 PROTEIN_ASSOCIATION: Pck SUBSYSTEM: S_Anaplerotic_Reactions PROTEIN_CLASS: 4.1.1.49
reactant: 261621
reversible: false
name: R_phosphoenolpyruvate_carboxykinase
product: 261669

039571
value: -0.487462
type: LocalParameter

266907
stoichiometry: 1.0
species: 478711
type: SpeciesReference

065327
value: 0.0
type: LocalParameter

503669
type: Reaction
reactant: 054454
product: 054478
fast: false
reactant: 054466
notes: GENE_ASSOCIATION: b1982 PROTEIN_ASSOCIATION: Amn SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.2.2.4
reversible: false
kinetic law: 054503
product: 054491
name: R_AMP_nucleosidase

269670
value: -0.004657
type: LocalParameter

511968
kinetic law: 107685
product: 107672
reactant: 107659
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Adenine_exchange
type: Reaction

042136
units: 017602
value: 0.0
type: LocalParameter

043381
units: 017602
value: 999999.0
type: LocalParameter

033874
units: 017602
value: 0.0
type: LocalParameter

285054
units: 017602
value: 0.0
type: LocalParameter

020541
stoichiometry: 1.0
species: 463013
type: SpeciesReference

294756
stoichiometry: 1.0
species: 490610
type: SpeciesReference

119127
units: 017602
value: 0.0
type: LocalParameter

083349
units: 017602
value: 0.0
type: LocalParameter

047003
stoichiometry: 1.0
species: 465632
type: SpeciesReference

121724
stoichiometry: 1.0
species: 495889
type: SpeciesReference

177064
units: 017602
value: 0.0
type: LocalParameter

233023
units: 017602
value: 999999.0
type: LocalParameter

052083
value: 0.0
type: LocalParameter

156093
stoichiometry: 1.0
species: 478751
type: SpeciesReference

531066
reactant: 230312
kinetic law: 230361
notes: GENE_ASSOCIATION: ( b2744 or b2291 ) PROTEIN_ASSOCIATION: ( SurE ) or ( YfbR ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
product: 230349
product: 230337
name: R_5__nucleotidase__dCMP_
type: Reaction
fast: false
reversible: false
reactant: 230325

251679
stoichiometry: 1.0
species: 478591
type: SpeciesReference

061647
stoichiometry: 1.0
species: 478531
type: SpeciesReference

283420
stoichiometry: 1.0
species: 469232
type: SpeciesReference

193037
stoichiometry: 1.0
species: 470812
type: SpeciesReference

148466
value: 0.0
type: LocalParameter

221193
units: 017602
value: 999999.0
type: LocalParameter

159313
stoichiometry: 1.0
species: 478591
type: SpeciesReference

107409
units: 017602
value: 999999.0
type: LocalParameter

498409
kinetic law: 022158
product: 022120
notes: GENE_ASSOCIATION: b2836 PROTEIN_ASSOCIATION: Aas SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.3.1.40
type: Reaction
product: 022132
reactant: 022095
reversible: false
reactant: 022083
reactant: 022107
name: R_2_acyl_glycerophospho_ethanolamine_acyltransferase__n_C161_
fast: false
product: 022145

255025
units: 017602
value: 999999.0
type: LocalParameter

239226
stoichiometry: 1.0
species: 478711
type: SpeciesReference

093888
units: 017602
value: 0.0
type: LocalParameter

209767
stoichiometry: 1.0
species: 483031
type: SpeciesReference

019104
units: 017602
value: -999999.0
type: LocalParameter

110056
units: 017602
value: -0.003783
type: LocalParameter

246982
units: 017602
value: 0.0
type: LocalParameter

258421
stoichiometry: 1.0
species: 485151
type: SpeciesReference

084199
units: 017602
value: 0.0
type: LocalParameter

152023
units: 017602
value: 0.0
type: LocalParameter

059386
stoichiometry: 1.0
species: 468912
type: SpeciesReference

215211
value: 0.0
type: LocalParameter

264790
value: 0.0
type: LocalParameter

516628
kinetic law: 130251
product: 130239
reactant: 130227
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Threonine_exchange
type: Reaction

216735
units: 017602
value: 999999.0
type: LocalParameter

503909
name: R_5_amino_6__5_phosphoribosylamino_uracil_reductase
reactant: 055949
product: 055986
kinetic law: 056011
reactant: 055961
reversible: false
notes: GENE_ASSOCIATION: b0414 PROTEIN_ASSOCIATION: RibDec SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 1.1.1.193
product: 055998
reactant: 055974
type: Reaction
fast: false

474231
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_D_Fructose_1_phosphate_C6H11O9P
type: Species

148707
value: 0.004657
type: LocalParameter

224335
stoichiometry: 1.0
species: 467132
type: SpeciesReference

141329
value: -0.002328
type: LocalParameter

099134
stoichiometry: 1.0
species: 478711
type: SpeciesReference

185636
units: 017602
value: -999999.0
type: LocalParameter

301653
stoichiometry: 1.0
species: 470632
type: SpeciesReference

085591
units: 017602
value: 0.0
type: LocalParameter

025450
value: 0.0
type: LocalParameter

304312
units: 017602
value: -999999.0
type: LocalParameter

182394
stoichiometry: 1.0
species: 484451
type: SpeciesReference

231844
value: 0.0
type: LocalParameter

039960
stoichiometry: 1.0
species: 478591
type: SpeciesReference

170983
units: 017602
value: 0.0
type: LocalParameter

474232
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_D_Fructose_6_phosphate_C6H11O9P
type: Species

236754
stoichiometry: 1.0
species: 475031
type: SpeciesReference

278235
units: 017602
value: 0.0
type: LocalParameter

265761
stoichiometry: 1.0
species: 483211
type: SpeciesReference

245185
stoichiometry: 1.0
species: 469232
type: SpeciesReference

469552
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_butanesulfonate_C4H9O3S
type: Species

116555
value: -0.007102
type: LocalParameter

499409
fast: false
type: Reaction
reactant: 028190
reactant: 028178
name: R_3_oxoacyl_acyl_carrier_protein_reductase__n_C160_
product: 028226
product: 028214
reversible: true
reactant: 028202
notes: GENE_ASSOCIATION: b1093 PROTEIN_ASSOCIATION: FabG SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.1.1.100
kinetic law: 028238

300823
stoichiometry: 1.0
species: 491690
type: SpeciesReference

518547
product: 146375
fast: false
kinetic law: 146399
reactant: 146363
product: 146387
type: Reaction
reactant: 146350
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
reversible: false
name: R_ferroxamine__minus_Fe3__secretion__to_extracellular_

540625
type: Reaction
reactant: 301617
kinetic law: 301677
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Unassigned PROTEIN_CLASS: 1.7.3.3
reactant: 301605
product: 301665
product: 301653
product: 301641
reactant: 301629
name: R_uricase
fast: false
reversible: false

215358
stoichiometry: 1.0
species: 483071
type: SpeciesReference

251888
value: 0.0
type: LocalParameter

141678
stoichiometry: 1.0
species: 474451
type: SpeciesReference

038191
units: 017602
value: 0.0
type: LocalParameter

287570
value: -0.003027
type: LocalParameter

017795
units: 017602
value: 999999.0
type: LocalParameter

507748
product: 082794
type: Reaction
product: 082782
kinetic law: 082806
name: R_deoxyadenosine_transport_in_via_proton_symport__periplasm_
reversible: false
fast: false
reactant: 082770
notes: GENE_ASSOCIATION: ( b2393 or b2964 ) PROTEIN_ASSOCIATION: ( NupCec ) or ( NupG ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reactant: 082757

177748
value: 0.0
type: LocalParameter

237620
stoichiometry: 1.0
species: 463313
type: SpeciesReference

233446
units: 017602
value: 0.0
type: LocalParameter

304516
units: 017602
value: 0.0
type: LocalParameter

208269
stoichiometry: 1.0
species: 481731
type: SpeciesReference

273804
stoichiometry: 1.0
species: 485830
type: SpeciesReference

257613
stoichiometry: 1.0
species: 478631
type: SpeciesReference

261851
units: 017602
value: 0.0
type: LocalParameter

065983
stoichiometry: 1.0
species: 486270
type: SpeciesReference

117356
stoichiometry: 1.0
species: 495230
type: SpeciesReference

508388
kinetic law: 086763
product: 086751
reactant: 086739
notes: GENE_ASSOCIATION: b0411 PROTEIN_ASSOCIATION: Tsx SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
fast: false
reversible: true
name: R_deoxycytidine_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

154195
units: 017602
value: 0.0
type: LocalParameter

086751
stoichiometry: 1.0
species: 472292
type: SpeciesReference

157608
stoichiometry: 1.0
species: 467132
type: SpeciesReference

040791
units: 017602
value: 0.0
type: LocalParameter

164618
stoichiometry: 1.0
species: 464752
type: SpeciesReference

273394
value: -0.013971
type: LocalParameter

265265
units: 017602
value: 999999.0
type: LocalParameter

258639
value: 0.0
type: LocalParameter

500489
kinetic law: 035237
product: 035225
reactant: 035213
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_acetoacetate_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

211622
units: 017602
value: 0.0
type: LocalParameter

537386
product: 270945
notes: GENE_ASSOCIATION: ( b2418 or b1636 ) PROTEIN_ASSOCIATION: ( PdxK ) or ( PdxYec ) SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.7.1.35
reversible: false
reactant: 270921
kinetic law: 270969
type: Reaction
reactant: 270908
product: 270933
name: R_pyridoxal_kinase
fast: false
product: 270957

039341
stoichiometry: 1.0
species: 472412
type: SpeciesReference

172066
stoichiometry: 1.0
species: 475591
type: SpeciesReference

065569
stoichiometry: 1.0
species: 478751
type: SpeciesReference

525767
product: 190992
fast: false
product: 190980
kinetic law: 191004
name: R_beta_ketoacyl_ACP_synthase__2_
reactant: 190956
reactant: 190932
reversible: false
type: Reaction
product: 190968
notes: GENE_ASSOCIATION: b1091 PROTEIN_ASSOCIATION: FabHec SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS:
reactant: 190944

066297
units: 017602
value: 999999.0
type: LocalParameter

068204
value: -0.009314
type: LocalParameter

123598
units: 017602
value: 999999.0
type: LocalParameter

113668
stoichiometry: 1.0
species: 473772
type: SpeciesReference

509768
reversible: false
reactant: 095158
type: Reaction
kinetic law: 095195
notes: GENE_ASSOCIATION: ( ( b4136 and b3781 ) or ( b4136 and b2582 ) ) PROTEIN_ASSOCIATION: ( DsbD and TrxA ) or ( DsbD and TrxC ) SUBSYSTEM: S_Unassigned PROTEIN_CLASS:
reactant: 095146
product: 095170
product: 095182
fast: false
name: R_DsbD_reductase

147378
stoichiometry: 1.0
species: 483391
type: SpeciesReference

145738
units: 017602
value: 0.0
type: LocalParameter

209996
stoichiometry: 1.0
species: 483071
type: SpeciesReference

518987
fast: false
product: 149352
type: Reaction
notes: GENE_ASSOCIATION: b3370 PROTEIN_ASSOCIATION: FrlA SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 149364
kinetic law: 149376
reactant: 149328
name: R_Fructoselysine_transport_via_proton_symport__periplasm_
reactant: 149340
reversible: false

524127
fast: false
reactant: 180920
type: Reaction
name: R_hexanoate_transport_via_proton_symport__reversible__periplasm_
product: 180956
product: 180944
kinetic law: 180968
reversible: true
reactant: 180932
notes: GENE_ASSOCIATION: b2223 PROTEIN_ASSOCIATION: AtoE SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:

149147
units: 017602
value: 999999.0
type: LocalParameter

201406
stoichiometry: 1.0
species: 462453
type: SpeciesReference

185087
units: 017602
value: 0.0
type: LocalParameter

286772
stoichiometry: 1.0
species: 489750
type: SpeciesReference

122946
units: 017602
value: 0.0
type: LocalParameter

163976
stoichiometry: 1.0
species: 477191
type: SpeciesReference

229988
stoichiometry: 1.0
species: 485870
type: SpeciesReference

279617
units: 017602
value: 999999.0
type: LocalParameter

047725
stoichiometry: 1.0
species: 467352
type: SpeciesReference

504349
name: R_L_arginine_transport_out_via_proton_antiport__cytoplasm_to_periplasm_
fast: false
reactant: 058797
product: 058821
reversible: false
reactant: 058785
product: 058809
notes: GENE_ASSOCIATION: b2923 PROTEIN_ASSOCIATION: ArgO SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
kinetic law: 058833
type: Reaction

084585
stoichiometry: 1.0
species: 461993
type: SpeciesReference

295096
stoichiometry: 1.0
species: 491030
type: SpeciesReference

060841
stoichiometry: 1.0
species: 469112
type: SpeciesReference

199851
stoichiometry: 1.0
species: 484171
type: SpeciesReference

069449
stoichiometry: 1.0
species: 470172
type: SpeciesReference

186461
units: 017602
value: 0.0
type: LocalParameter

212170
stoichiometry: 1.0
species: 478711
type: SpeciesReference

072101
units: 017602
value: 999999.0
type: LocalParameter

088300
value: 0.0
type: LocalParameter

020310
value: 0.0
type: LocalParameter

030825
value: 0.0
type: LocalParameter

252733
stoichiometry: 1.0
species: 477651
type: SpeciesReference

097422
stoichiometry: 1.0
species: 483351
type: SpeciesReference

051220
units: 017602
value: 0.0
type: LocalParameter

213003
value: 0.0
type: LocalParameter

197797
value: -0.10187
type: LocalParameter

167582
stoichiometry: 1.0
species: 477711
type: SpeciesReference

130867
value: 0.0
type: LocalParameter

525367
kinetic law: 188509
notes: GENE_ASSOCIATION: b3679 PROTEIN_ASSOCIATION: YidK SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reversible: false
reactant: 188473
product: 188485
product: 188497
name: R_Namyo_inositol_symporter__periplasm_
fast: false
type: Reaction
reactant: 188461

279472
units: 017602
value: 0.0
type: LocalParameter

026836
units: 017602
value: 0.0
type: LocalParameter

297748
units: 017602
value: 999999.0
type: LocalParameter

072866
value: 0.0
type: LocalParameter

512228
kinetic law: 108943
product: 108931
reactant: 108918
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramic_acid_exchange
type: Reaction

274555
stoichiometry: 1.0
species: 467132
type: SpeciesReference

133137
stoichiometry: 1.0
species: 492430
type: SpeciesReference

218924
units: 017602
value: 999999.0
type: LocalParameter

054019
units: 017602
value: 0.0
type: LocalParameter

039789
value: 0.0
type: LocalParameter

058677
stoichiometry: 1.0
species: 468792
type: SpeciesReference

102361
value: 0.0
type: LocalParameter

044488
stoichiometry: 1.0
species: 475391
type: SpeciesReference

195918
value: 0.0
type: LocalParameter

236235
stoichiometry: 1.0
species: 491210
type: SpeciesReference

304958
stoichiometry: 1.0
species: 478711
type: SpeciesReference

036563
stoichiometry: 1.0
species: 485870
type: SpeciesReference

509288
product: 092338
reactant: 092314
type: Reaction
reversible: false
notes: GENE_ASSOCIATION: b0421 PROTEIN_ASSOCIATION: IspA SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.1
fast: false
product: 092326
reactant: 092302
kinetic law: 092350
name: R_dimethylallyltranstransferase

079515
value: 0.0
type: LocalParameter

134513
units: 017602
value: 999999.0
type: LocalParameter

109573
units: 017602
value: 0.0
type: LocalParameter

540205
product: 297615
product: 297603
reversible: false
fast: false
name: R_UDPgalactose_pyrophosphohydrolase
product: 297591
reactant: 297579
type: Reaction
kinetic law: 297627
reactant: 297567
notes: GENE_ASSOCIATION: b0480 PROTEIN_ASSOCIATION: UshA SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 3.6.1.45

268563
stoichiometry: 1.0
species: 478711
type: SpeciesReference

025016
units: 017602
value: -999999.0
type: LocalParameter

069026
stoichiometry: 1.0
species: 485391
type: SpeciesReference

118873
units: 017602
value: 0.0
type: LocalParameter

272581
stoichiometry: 1.0
species: 487370
type: SpeciesReference

120290
units: 017602
value: 0.0
type: LocalParameter

276063
stoichiometry: 1.0
species: 478591
type: SpeciesReference

038721
units: 017602
value: 0.0
type: LocalParameter

019973
stoichiometry: 1.0
species: 478751
type: SpeciesReference

102577
units: 017602
value: 0.0
type: LocalParameter

163456
units: 017602
value: 999999.0
type: LocalParameter

186873
value: 0.0
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224679
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species: 469232
type: SpeciesReference

265530
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species: 486510
type: SpeciesReference

046568
units: 017602
value: 999999.0
type: LocalParameter

087272
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type: LocalParameter

525547
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product: 189539
product: 189551
reversible: false
type: Reaction
product: 189564
reactant: 189527
reactant: 189515
fast: false
name: R_3_isopropylmalate_dehydrogenase
kinetic law: 189576

018425
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species: 460693
type: SpeciesReference

540206
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product: 297711
reactant: 297699
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_UDPgalactose_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

273177
stoichiometry: 1.0
species: 478711
type: SpeciesReference

112293
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type: LocalParameter

158830
stoichiometry: 1.0
species: 476531
type: SpeciesReference

532666
type: Reaction
reactant: 240353
fast: false
reversible: false
name: R_pyrroline_5_carboxylate_reductase
kinetic law: 240401
reactant: 240365
product: 240389
notes: GENE_ASSOCIATION: b0386 PROTEIN_ASSOCIATION: ProC SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 1.5.1.2
reactant: 240340
product: 240377

220405
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species: 482091
type: SpeciesReference

065787
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value: 0.0
type: LocalParameter

511128
kinetic law: 103502
product: 103490
product: 103478
reactant: 103466
notes: GENE_ASSOCIATION: ( b2440 and b2441 ) PROTEIN_ASSOCIATION: EutBC SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 4.3.1.7
fast: false
reversible: false
name: R_Ethanolamine_ammonia_lyase
type: Reaction

066079
stoichiometry: 1.0
species: 478751
type: SpeciesReference

206087
stoichiometry: 1.0
species: 470692
type: SpeciesReference

017999
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type: LocalParameter

211405
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species: 465432
type: SpeciesReference

214235
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species: 478711
type: SpeciesReference

049658
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species: 469232
type: SpeciesReference

062154
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species: 467132
type: SpeciesReference

288527
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value: 999999.0
type: LocalParameter

090352
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species: 469652
type: SpeciesReference

095496
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value: 0.0
type: LocalParameter

160988
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species: 476931
type: SpeciesReference

151504
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species: 477811
type: SpeciesReference

043851
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species: 467092
type: SpeciesReference

124275
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value: 999999.0
type: LocalParameter

194780
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species: 465072
type: SpeciesReference

100940
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291171
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value: -999999.0
type: LocalParameter

224896
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value: 0.021581
type: LocalParameter

303910
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species: 492110
type: SpeciesReference

244998
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value: 0.0
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057724
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type: LocalParameter

272369
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value: 999999.0
type: LocalParameter

142002
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value: 999999.0
type: LocalParameter

245329
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type: LocalParameter

518767
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reactant: 147907
type: Reaction
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reactant: 147883
reactant: 147895
notes: GENE_ASSOCIATION: b0025 PROTEIN_ASSOCIATION: RibFec SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.7.7.2
product: 147931
product: 147919
fast: false
reversible: false

105912
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species: 464712
type: SpeciesReference

050424
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species: 474192
type: SpeciesReference

485071
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_phosphatidylethanolamine__ditetradec_7_enoyl__n_C141__C33H62N1O8P1
type: Species

147594
units: 017602
value: 0.0
type: LocalParameter

047943
units: 017602
value: 0.432456
type: LocalParameter

145011
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species: 475011
type: SpeciesReference

156214
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species: 476171
type: SpeciesReference

276601
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species: 470632
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113448
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value: 0.0
type: LocalParameter

509988
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product: 096432
reactant: 096420
notes: GENE_ASSOCIATION: b0411 PROTEIN_ASSOCIATION: Tsx SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
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reversible: true
name: R_deoxyuridine_transport_via_diffusion__extracellular_to_periplasm_
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248478
stoichiometry: 1.0
species: 474232
type: SpeciesReference

094251
units: 017602
value: 0.0
type: LocalParameter

101627
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type: LocalParameter

039121
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species: 474272
type: SpeciesReference

218704
units: 017602
value: 999999.0
type: LocalParameter

206570
value: 0.197919
type: LocalParameter

269103
units: 017602
value: 0.0
type: LocalParameter

040575
units: 017602
value: 2.439388
type: LocalParameter

018278
units: 017602
value: 999999.0
type: LocalParameter

244770
stoichiometry: 1.0
species: 478711
type: SpeciesReference

022357
units: 017602
value: 0.0
type: LocalParameter

196544
units: 017602
value: 0.0
type: LocalParameter

236992
stoichiometry: 1.0
species: 484191
type: SpeciesReference

086535
stoichiometry: 1.0
species: 483431
type: SpeciesReference

094868
value: 0.0
type: LocalParameter

181958
value: 0.0
type: LocalParameter

134367
stoichiometry: 1.0
species: 474232
type: SpeciesReference

057435
stoichiometry: 1.0
species: 478711
type: SpeciesReference

119554
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value: 0.0
type: LocalParameter

240619
value: -0.020956
type: LocalParameter

149401
units: 017602
value: 999999.0
type: LocalParameter

281323
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type: LocalParameter

113002
stoichiometry: 1.0
species: 494330
type: SpeciesReference

532446
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product: 238959
reactant: 238947
reactant: 238935
notes: GENE_ASSOCIATION: b3835 PROTEIN_ASSOCIATION: UbiB SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
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reversible: false
name: R_2_Octaprenylphenol_hydroxylase
type: Reaction

174804
stoichiometry: 1.0
species: 467132
type: SpeciesReference

055115
units: 017602
value: 999999.0
type: LocalParameter

297965
stoichiometry: 1.0
species: 470632
type: SpeciesReference

163026
units: 017602
value: 999999.0
type: LocalParameter

294309
units: 017602
value: 999999.0
type: LocalParameter

266219
stoichiometry: 1.0
species: 486790
type: SpeciesReference

127221
value: -0.08755
type: LocalParameter

540066
fast: false
reactant: 295950
product: 295974
kinetic law: 295999
product: 295986
reversible: false
type: Reaction
reactant: 295962
name: R_UDP_N_acetylglucosamine_1_carboxyvinyltransferase
notes: GENE_ASSOCIATION: b3189 PROTEIN_ASSOCIATION: MurA SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.5.1.7

504129
reversible: true
notes: GENE_ASSOCIATION: b2841 PROTEIN_ASSOCIATION: AraE SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 057435
reactant: 057410
product: 057423
reactant: 057398
kinetic law: 057447
fast: false
type: Reaction
name: R_L_arabinose_transport_via_proton_symport__periplasm_

141450
value: -0.002328
type: LocalParameter

124130
stoichiometry: 1.0
species: 481911
type: SpeciesReference

095207
units: 017602
value: 0.0
type: LocalParameter

148039
stoichiometry: 1.0
species: 483351
type: SpeciesReference

034489
value: 0.0
type: LocalParameter

138210
stoichiometry: 1.0
species: 478751
type: SpeciesReference

076407
stoichiometry: 1.0
species: 471112
type: SpeciesReference

150340
stoichiometry: 1.0
species: 478751
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086969
stoichiometry: 1.0
species: 467132
type: SpeciesReference

050859
stoichiometry: 1.0
species: 478591
type: SpeciesReference

125642
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type: LocalParameter

540065
notes: GENE_ASSOCIATION: ( b1094 and b0181 ) PROTEIN_ASSOCIATION: ( AcpP and LpxA ) SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS: 2.3.1.129
product: 295854
reactant: 295830
product: 295866
kinetic law: 295878
name: R_UDP_N_acetylglucosamine_acyltransferase
type: Reaction
reactant: 295842
reversible: true
fast: false

280684
value: 0.0
type: LocalParameter

030607
stoichiometry: 1.0
species: 465632
type: SpeciesReference

493530
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_aerobactin_minus_Fe3_C22H33N4O13
type: Species

157194
units: 017602
value: 0.0
type: LocalParameter

093040
units: 017602
value: 0.0
type: LocalParameter

142829
units: 017602
value: 0.0
type: LocalParameter

264163
stoichiometry: 1.0
species: 462633
type: SpeciesReference

477271
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_L_Glutamate_5_semialdehyde_C5H9NO3
type: Species

220623
value: 0.0
type: LocalParameter

283649
units: 017602
value: 0.0
type: LocalParameter

112075
value: 0.0
type: LocalParameter

269248
value: 0.0
type: LocalParameter

099782
units: 017602
value: 0.0
type: LocalParameter

484491
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_Ornithine_C5H13N2O2
type: Species

163673
stoichiometry: 1.0
species: 477151
type: SpeciesReference

054962
units: 017602
value: 999999.0
type: LocalParameter

087053
value: 0.0
type: LocalParameter

035864
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type: LocalParameter

265313
stoichiometry: 1.0
species: 469232
type: SpeciesReference

189323
units: 017602
value: 999999.0
type: LocalParameter

468432
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
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type: Species

203131
stoichiometry: 1.0
species: 478711
type: SpeciesReference

143687
stoichiometry: 1.0
species: 474411
type: SpeciesReference

257044
units: 017602
value: 0.0
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252953
units: 017602
value: 0.0
type: LocalParameter

538246
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product: 276257
reactant: 276245
notes: GENE_ASSOCIATION: ( b2914 or b4090 ) PROTEIN_ASSOCIATION: ( RpiA ) or ( RpiB ) SUBSYSTEM: S_Pentose_Phosphate_Pathway PROTEIN_CLASS: 5.3.1.6
fast: false
reversible: true
name: R_ribose_5_phosphate_isomerase
type: Reaction

226528
stoichiometry: 1.0
species: 478711
type: SpeciesReference

202336
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species: 478711
type: SpeciesReference

151710
value: 0.0
type: LocalParameter

150557
stoichiometry: 1.0
species: 475431
type: SpeciesReference

065109
value: 0.0
type: LocalParameter

515268
kinetic law: 123671
product: 123659
reactant: 123647
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Maltotriose_exchange
type: Reaction

135490
value: 0.0
type: LocalParameter

486591
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_L_Prolinylglycine_C7H12N2O3
type: Species

304736
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value: 0.0
type: LocalParameter

035431
units: 017602
value: 0.0
type: LocalParameter

062598
value: 0.0
type: LocalParameter

177495
units: 017602
value: 0.0
type: LocalParameter

507528
kinetic law: 081457
name: R_cytidine_deaminase
type: Reaction
fast: false
reactant: 081421
reactant: 081409
product: 081445
reversible: false
notes: GENE_ASSOCIATION: b2143 PROTEIN_ASSOCIATION: Cdd SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.5.4.5
reactant: 081397
product: 081433

279965
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species: 487950
type: SpeciesReference

463392
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
type: Species

121940
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value: 0.0
type: LocalParameter

192629
units: 017602
value: 0.0
type: LocalParameter

160759
units: 017602
value: -999999.0
type: LocalParameter

078675
stoichiometry: 1.0
species: 471452
type: SpeciesReference

063990
value: 0.0
type: LocalParameter

156637
value: 0.0
type: LocalParameter

046773
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species: 484691
type: SpeciesReference

075814
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type: LocalParameter

244566
value: 0.0
type: LocalParameter

486590
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
name: M_L_Prolinylglycine_C7H12N2O3
type: Species

531286
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product: 231664
type: Reaction
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notes: GENE_ASSOCIATION: ( b0480 or b4055 ) PROTEIN_ASSOCIATION: ( UshA ) or ( AphA ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
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reactant: 231640
reversible: false
kinetic law: 231688
reactant: 231652

463393
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
name: M_D_Glycerate_2_phosphate_C3H4O7P
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299172
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value: 0.03107
type: LocalParameter

209549
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species: 478711
type: SpeciesReference

169769
stoichiometry: 1.0
species: 482791
type: SpeciesReference

082830
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value: 999999.0
type: LocalParameter

511748
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product: 106603
reactant: 106591
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Acetoacetate_exchange
type: Reaction

077299
units: 017602
value: 0.0
type: LocalParameter

513608
kinetic law: 115624
product: 115612
reactant: 115600
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_ferroxamine_minus_Fe_3__exchange
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486711
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460333
type: Species

533166
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reactant: 243684
fast: false
reversible: false
reactant: 243672
type: Reaction
name: R_Phosphatidate_phosphatase__periplasmic__n_C181_
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kinetic law: 243720
notes: GENE_ASSOCIATION: b1278 PROTEIN_ASSOCIATION: PgpB SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.3.4

475511
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Glyceraldehyde_3_phosphate_C3H5O6P
type: Species

174116
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species: 478711
type: SpeciesReference

048691
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species: 469232
type: SpeciesReference

028468
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species: 483391
type: SpeciesReference

171428
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species: 476931
type: SpeciesReference

480791
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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241863
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species: 486210
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532986
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reversible: false
name: R_Phosphatidate_phosphatase__n_C141_
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notes: GENE_ASSOCIATION: b1278 PROTEIN_ASSOCIATION: PgpB SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.3.4
fast: false
product: 242610
reactant: 242586
kinetic law: 242634

181728
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species: 468052
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113219
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value: 0.0
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033656
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species: 469232
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213849
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092363
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056361
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species: 474352
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105286
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value: 999999.0
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486710
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initial amount: NaN
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272775
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species: 487390
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285272
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species: 478591
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069898
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species: 485830
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287922
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173897
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species: 478371
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234697
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species: 483331
type: SpeciesReference

206799
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101831
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value: 0.0
type: LocalParameter

475731
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 460293
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068833
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value: 999999.0
type: LocalParameter

092097
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170264
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species: 477451
type: SpeciesReference

151939
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127016
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182177
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type: LocalParameter

518327
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product: 144757
reactant: 144745
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notes: GENE_ASSOCIATION: ( b0150 and ( b1252 and b3005 and b3006 ) ) PROTEIN_ASSOCIATION: ( FhuA and Ton ) SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
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kinetic law: 144781
product: 144769

216517
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value: 0.0
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051804
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species: 467852
type: SpeciesReference

474012
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 460313
type: Species

186012
value: 0.0
type: LocalParameter

080073
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species: 467612
type: SpeciesReference

019322
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282840
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species: 475391
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169095
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species: 482691
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254336
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species: 484751
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485070
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initial concentration: NaN
initial amount: NaN
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081191
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value: 0.0
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187940
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species: 492090
type: SpeciesReference

025884
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116774
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species: 495110
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231628
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059169
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species: 463673
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037070
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value: 999999.0
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124698
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type: LocalParameter

465692
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460313
name: M_L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate_D_alanine_C18H30N5O9
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136710
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species: 484131
type: SpeciesReference

496709
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 460293
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118181
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type: LocalParameter

109149
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228122
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225561
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value: 0.0
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173680
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value: 999999.0
type: LocalParameter

079963
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species: 478711
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199151
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species: 478591
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500989
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product: 038227
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notes: GENE_ASSOCIATION: ( b2215 or b0241 or b0929 or b1377 ) PROTEIN_ASSOCIATION: ( OmpC ) or ( PhoE ) or ( OmpF ) or ( OmpN ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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name: R_N_acetyl_D_mannosamine_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

177052
value: 0.0
type: LocalParameter

140169
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value: 999999.0
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product: 097710
product: 097722

047015
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species: 484771
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species: 497009
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reactant: 038095
reversible: false
fast: false
product: 038119
product: 038131
type: Reaction
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reversible: true
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221181
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kinetic law: 192338
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reversible: true
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initial amount: NaN
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species: 478711
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species: 469232
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species: 478591
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value: 999999.0
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species: 475131
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017783
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303996
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079734
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species: 485830
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initial amount: NaN
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