283622
value: 1000.0
name: k1
type: LocalParameter

283673
value: 0.05
name: k1
type: LocalParameter

173686
stoichiometry: 1.0
species: metaid species 28
type: SpeciesReference

173276
stoichiometry: 1.0
species: metaid species 13
type: SpeciesReference

metaid species 5
is: http://identifiers.org/ec-code/2.7.1.1
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.001
initial amount: NaN
in compartment: metaid compartment 1
name: hexokinase
type: Species

283611
kinetic law: 173602
product: 173590
product: 173578
reactant: 173566
reactant: 173554
fast: false
reversible: true
name: reaction 27
type: Reaction

172396
stoichiometry: 1.0
species: metaid species 1
type: SpeciesReference

283573
kinetic law: 172420
product: 172408
reactant: 172396
fast: false
reversible: false
name: reaction 2
type: Reaction

283632
value: 10.0
name: k1
type: LocalParameter

172480
stoichiometry: 1.0
species: metaid species 4
type: SpeciesReference

metaid species 32
is: CHEBI:16810
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.017
initial amount: NaN
in compartment: metaid compartment 1
name: CIT1C: alpha-oxoglutarate
type: Species

283652
value: 0.05
name: k1
type: LocalParameter

283588
kinetic law: 172858
product: 172845
product: 172833
reactant: 172821
reactant: 172809
fast: false
reversible: true
name: Glucose 6 Phosphate dehydrogenase
type: Reaction

283593
kinetic law: 173004
product: 172992
reactant: 172980
fast: false
reversible: true
name: Phosphoribose isomerase
type: Reaction

283612
kinetic law: 173650
product: 173638
reactant: 173626
reactant: 173614
fast: false
reversible: true
name: TCA1
type: Reaction

283621
value: 37.8
name: k2
type: LocalParameter

283672
value: 0.05
name: k1
type: LocalParameter

283574
kinetic law: 172468
product: 172456
reactant: 172444
reactant: 172432
fast: false
reversible: true
name: reaction 3
type: Reaction

283640
value: 50.0
name: k2
type: LocalParameter

metaid species 6
is: CHEBI:14314
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.058
initial amount: NaN
in compartment: metaid compartment 1
name: glucose 6-phosphate
type: Species

283650
value: 1.0
name: k2
type: LocalParameter

283602
kinetic law: 173314
product: 173302
product: 173289
reactant: 173276
fast: false
reversible: false
name: Pyruvate dehydrogenase
type: Reaction

173250
stoichiometry: 1.0
species: metaid species 24
type: SpeciesReference

172992
stoichiometry: 1.0
species: metaid species 20
type: SpeciesReference

172504
stoichiometry: 1.0
species: metaid species 5
type: SpeciesReference

metaid species 31
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.09
initial amount: NaN
in compartment: metaid compartment 1
name: CIT2C: all C6 compounds in the tricarboxylic acid cycle
type: Species

metaid compartment 2
is: GO:0005576
constant: true
size: 1.0
spatial dimensions: 3.0
name: extracellular
type: Compartment

283641
value: 7.5
name: k1
type: LocalParameter

172699
stoichiometry: 1.0
species: metaid species 10
type: SpeciesReference

173338
stoichiometry: 1.0
species: metaid species 18
type: SpeciesReference

283575
kinetic law: 172516
product: 172504
product: 172492
reactant: 172480
fast: false
reversible: false
name: reaction 4
type: Reaction

283594
kinetic law: 173040
product: 173028
reactant: 173016
fast: false
reversible: true
name: D-Ribose 5-phosphate 3-epimerase
type: Reaction

metaid species 3
is: CHEBI:17716
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.0E-9
initial amount: NaN
in compartment: metaid compartment 1
name: lactose
type: Species

metaid species 19
is: CHEBI:17363
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.5
initial amount: NaN
in compartment: metaid compartment 1
name: ribulose 5-phosphate
type: Species

283620
value: 378.0
name: k1
type: LocalParameter

173674
stoichiometry: 1.0
species: metaid species 32
type: SpeciesReference

283634
value: 0.442
name: k2
type: LocalParameter

283585
kinetic law: 172759
product: 172747
reactant: 172735
fast: false
reversible: true
name: reaction 10
type: Reaction

172956
stoichiometry: 1.0
species: metaid species 16
type: SpeciesReference

283654
value: 0.0162
name: k2
type: LocalParameter

173374
stoichiometry: 1.0
species: metaid species 13
type: SpeciesReference

metaid species 30
is: CHEBI:35366
constant: false
boundary condition: false
has only substance units: false
initial concentration: 6.67
initial amount: NaN
in compartment: metaid compartment 1
name: fatty acids
type: Species

173289
stoichiometry: 1.0
species: metaid species 25
type: SpeciesReference

metaid species 18
is: CHEBI:16526
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.0E-9
initial amount: NaN
in compartment: metaid compartment 1
name: CO2A
type: Species

metaid species 4
type: Species
constant: false
has only substance units: false
name: glucose-hexokinase
initial concentration: 1.0E-9
in compartment: metaid compartment 1
initial amount: NaN
boundary condition: false
has part: CHEBI:15721
has part: http://identifiers.org/ec-code/2.7.1.1

283670
value: 0.05
name: k1
type: LocalParameter

283597
kinetic law: 173160
product: 173148
product: 173136
reactant: 173124
reactant: 173112
fast: false
reversible: true
name: reaction 18
type: Reaction

283614
kinetic law: 173698
product: 173686
product: 173674
reactant: 173662
fast: false
reversible: false
name: TCA2
type: Reaction

283660
value: 28.5
name: k1
type: LocalParameter

283600
kinetic law: 173263
product: 173250
reactant: 173237
fast: false
reversible: true
name: Lactate dehydrogenase
type: Reaction

172456
stoichiometry: 1.0
species: metaid species 4
type: SpeciesReference

283587
kinetic law: 172797
product: 172785
reactant: 172772
fast: false
reversible: false
name: reaction 11
type: Reaction

173326
stoichiometry: 1.0
species: metaid species 13
type: SpeciesReference

173422
stoichiometry: 1.0
species: metaid species 13
type: SpeciesReference

283680
value: 1.7
name: k1
type: LocalParameter

283596
kinetic law: 173100
product: 173088
product: 173076
reactant: 173064
reactant: 173052
fast: false
reversible: true
name: Transketolase
type: Reaction

173211
stoichiometry: 1.0
species: metaid species 23
type: SpeciesReference

172540
stoichiometry: 1.0
species: metaid species 5
type: SpeciesReference

metaid species 9
is: CHEBI:16905
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0125
initial amount: NaN
in compartment: metaid compartment 1
name: fructose 1,6 diphosphate
type: Species

metaid species 27
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.307
initial amount: NaN
in compartment: metaid compartment 1
name: CIT0C: all C4 compounds in the tricarboxylic acid cycle
type: Species

173386
stoichiometry: 1.0
species: metaid species 26
type: SpeciesReference

metaid species 17
is: CHEBI:16863
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.094
initial amount: NaN
in compartment: metaid compartment 1
name: 6-phosphogluconate
type: Species

283615
kinetic law: 173746
product: 173734
product: 173722
reactant: 173710
fast: false
reversible: false
name: TCA3
type: Reaction

283605
kinetic law: 173410
product: 173398
reactant: 173386
reactant: 173374
fast: false
reversible: false
name: CO2 fixation B
type: Reaction

283646
value: 2.07
name: k2
type: LocalParameter

172711
stoichiometry: 1.0
species: metaid species 11
type: SpeciesReference

173590
stoichiometry: 1.0
species: metaid species 15
type: SpeciesReference

283656
value: 0.069
name: k2
type: LocalParameter

173148
stoichiometry: 1.0
species: metaid species 11
type: SpeciesReference

283683
value: 0.375
name: k1
type: LocalParameter

283584
kinetic law: 172723
product: 172711
reactant: 172699
fast: false
reversible: true
name: Triose phosphate isomerase
type: Reaction

283616
value: 0.05
name: k1
type: LocalParameter

172785
stoichiometry: 1.0
species: metaid species 13
type: SpeciesReference

metaid species 26
is: CHEBI:16526
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.0E-9
initial amount: NaN
in compartment: metaid compartment 1
name: CO2B
type: Species

MODEL1004070000
species: metaid species 32
species: metaid species 30
creator:
  ORG:
    orgname: University of Manchester
  n:
    given: Kieran
    family: Smallbone
time units: 172336
reaction: 283605
reaction: 283572
reaction: 283603
species: metaid species 15
creator:
  ORG:
    orgname: University of Manchester
  n:
    given: Kieran
    family: Smallbone
reaction: 283599
species: metaid species 5
reaction: 283584
reaction: 283615
species: metaid species 9
creator:
  ORG:
    orgname: University of Manchester
  n:
    given: Holly
    family: Summersgill
species: metaid species 4
species: metaid species 8
reaction: 283578
species: metaid species 21
reaction: 283612
species: metaid species 18
reaction: 283588
length unit: 335510
reaction: 283596
species: metaid species 1
species: metaid species 29
species: metaid species 13
compartment: metaid compartment 1
species: metaid species 27
reaction: 283606
name: Haut1974_Pentose_Cycle_Rat
reaction: 283573
reaction: 283593
species: metaid species 26
units def: 172312
reaction: 283585
species: metaid species 14
species: metaid species 24
volume units: 950046
area units: area
reaction: 283609
species: metaid species 12
reaction: 283597
species: metaid species 3
reaction: 283582
reaction: 283611
species: metaid species 7
species: metaid species 11
compartment: metaid compartment 2
species: metaid species 25
is described by: http://identifiers.org/pubmed/4154746
species: metaid species 20
reaction: 283574
reaction: 283594
species: metaid species 17
reaction: 283590
species: metaid species 31
type: SBMLModel
species: metaid species 6
substance units: 172312
reaction: 283602
reaction: 283600
species: metaid species 23
reaction: 283608
units def: 172336
reaction: 283614
reaction: 283581
species: metaid species 22
species: metaid species 19
curated: false
is: http://identifiers.org/taxonomy/10114
reaction: 283579
species: metaid species 10
reaction: 283575
reaction: 283587
species: metaid species 2
notes: This is the Unlabelled model as described in: Simulation of the Pentose Cycle in Lactating Rat Mammary Gland Haut MJ , London JW , Garfinkel D Biochem J. 1974,138(3), 511-524. PMID: 4154746 ;PMCID: PMC1166237 Abstract: A computer model representing the pentose cycle, the tricarboxylic acid cycle and glycolysis in slices of lactating rat mammary glands has been constructed. This model is based primarily on the studies, with radioactive chemicals, of Abraham and Chaikoff (1959) [although some of the discrepant data of Katz and Wals (1972) could be accommodated by changing one enzyme activity]. Data obtained by using [1-(14)C]-, [6-(14)C]- and [3,4-(14)C]-glucose were simulated, as well as data obtained by using unlabelled glucose (for which some new experimental data are presented). Much past work on the pentose cycle has been mainly concerned with the division of glucose flow between the pentose cycle and glycolysis, and has relied on the assumption that the system is in steady state (both labelled and unlabelled). This assumption may not apply to lactating rat mammary glands, since the model shows that the percentage flow through the shunt progressively decreased for the first 2h of a 3h experiment, and we were unable to construct a completely steady-state model. The model allows examination of many quantitative features of the system, especially the amount of material passing through key enzymes, some of which appear to be regulated by NADP(+) concentrations as proposed by McLean (1960). Supplementary information for this paper has been deposited as Supplementary Publication SUP 50023 at the British Museum (Lending Division) (formerly the National Lending Library for Science and Technology), Boston Spa, Yorks. LS23 7BQ, U.K., from whom copies can be obtained on the terms indicated in Biochem. J. (1973) 131, 5. All reactions are modelled as mass action, reactions labelled 1-30 in the order they appear in Scheme 1. Note that the unit of substance is micromole per 0.5…
species: metaid species 28
reaction: 283591
species: metaid species 16

172444
stoichiometry: 1.0
species: metaid species 5
type: SpeciesReference

173136
stoichiometry: 1.0
species: metaid species 8
type: SpeciesReference

283606
kinetic law: 173458
product: 173446
reactant: 173434
reactant: 173422
fast: false
reversible: false
name: CO2 fixation C
type: Reaction

283599
kinetic law: 173224
product: 173211
product: 173198
reactant: 173185
reactant: 173173
fast: false
reversible: true
name: Transaldolase
type: Reaction

metaid species 16
is: CHEBI:16474
constant: false
boundary condition: false
has only substance units: false
initial concentration: 3.8
initial amount: NaN
in compartment: metaid compartment 1
name: NADPH
type: Species

173434
stoichiometry: 1.0
species: metaid species 28
type: SpeciesReference

173734
stoichiometry: 1.0
species: metaid species 29
type: SpeciesReference

172870
stoichiometry: 1.0
species: metaid species 14
type: SpeciesReference

283682
value: 0.5
name: k2
type: LocalParameter

283655
value: 0.102
name: k1
type: LocalParameter

283603
kinetic law: 173362
product: 173350
reactant: 173338
reactant: 173326
fast: false
reversible: false
name: CO2 fixation A
type: Reaction

173398
stoichiometry: 1.0
species: metaid species 27
type: SpeciesReference

283630
value: 0.3
name: k2
type: LocalParameter

283581
kinetic law: 172638
product: 172626
reactant: 172613
fast: false
reversible: true
name: Phosphofructosekinase
type: Reaction

283617
value: 0.886
name: k2
type: LocalParameter

172552
stoichiometry: 1.0
species: metaid species 7
type: SpeciesReference

metaid species 29
is: CHEBI:16526
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.0E-9
initial amount: NaN
in compartment: metaid compartment 1
name: CO2D
type: Species

172882
stoichiometry: 1.0
species: metaid species 17
type: SpeciesReference

metaid species 7
has part: CHEBI:14314
initial amount: NaN
has only substance units: false
initial concentration: 1.0E-9
type: Species
boundary condition: false
constant: false
in compartment: metaid compartment 1
name: hexokinase (inhibited)
has part: http://identifiers.org/ec-code/2.7.1.1

173112
stoichiometry: 1.0
species: metaid species 23
type: SpeciesReference

172907
stoichiometry: 1.0
species: metaid species 17
type: SpeciesReference

metaid species 15
is: CHEBI:18009
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.019
initial amount: NaN
in compartment: metaid compartment 1
name: NADP+
type: Species

172919
stoichiometry: 1.0
species: metaid species 15
type: SpeciesReference

172492
stoichiometry: 1.0
species: metaid species 6
type: SpeciesReference

metaid compartment 1
is: GO:0005622
constant: true
size: 1.0
spatial dimensions: 3.0
name: intracellular
type: Compartment

173198
stoichiometry: 1.0
species: metaid species 8
type: SpeciesReference

283658
value: 0.6
name: k2
type: LocalParameter

173124
stoichiometry: 1.0
species: metaid species 21
type: SpeciesReference

283618
value: 0.009
name: k1
type: LocalParameter

metaid species 28
is: CHEBI:16526
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.0E-9
initial amount: NaN
in compartment: metaid compartment 1
name: CO2C
type: Species

173530
stoichiometry: 1.0
species: metaid species 15
type: SpeciesReference

172432
stoichiometry: 1.0
species: metaid species 1
type: SpeciesReference

283685
value: 0.375
name: k1
type: LocalParameter

metaid species 8
is: CHEBI:15946
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0312
initial amount: NaN
in compartment: metaid compartment 1
name: fructose 6-phosphate
type: Species

173446
stoichiometry: 1.0
species: metaid species 27
type: SpeciesReference

173722
stoichiometry: 1.0
species: metaid species 27
type: SpeciesReference

283582
kinetic law: 172687
product: 172674
product: 172662
reactant: 172650
fast: false
reversible: true
name: Aldolase
type: Reaction

283572
kinetic law: 172384
product: 172372
reactant: 172360
fast: false
reversible: true
name: reaction 1
type: Reaction

172348
exponent: 1.0
scale: 0
multipler: 60.0
kind: SECOND
type: SBMLUnit

metaid species 14
is: CHEBI:16938
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.094
initial amount: NaN
in compartment: metaid compartment 1
name: 6-phosphogluconolactone
type: Species

172626
stoichiometry: 1.0
species: metaid species 9
type: SpeciesReference

173494
stoichiometry: 1.0
species: metaid species 27
type: SpeciesReference

173185
stoichiometry: 1.0
species: metaid species 11
type: SpeciesReference

metaid species 13
is: CHEBI:15361
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.059
initial amount: NaN
in compartment: metaid compartment 1
name: pyruvate
type: Species

283643
value: 35.0
name: k1
type: LocalParameter

173638
stoichiometry: 1.0
species: metaid species 31
type: SpeciesReference

283657
value: 0.72
name: k1
type: LocalParameter

283667
value: 5.0E-4
name: k2
type: LocalParameter

172809
stoichiometry: 1.0
species: metaid species 6
type: SpeciesReference

metaid species 21
is: CHEBI:16332
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.5
initial amount: NaN
in compartment: metaid compartment 1
name: xylulose 5-phosphate
type: Species

metaid species 11
is: CHEBI:17138
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid compartment 1
name: glyceraldehyde 3-phosphate
type: Species

173173
stoichiometry: 1.0
species: metaid species 22
type: SpeciesReference

173482
stoichiometry: 1.0
species: metaid species 29
type: SpeciesReference

172336
unit: 172348
name: minute
type: SBMLUnitsDef

283608
kinetic law: 173506
product: 173494
reactant: 173482
reactant: 173470
fast: false
reversible: false
name: CO2 fixation D
type: Reaction

173710
stoichiometry: 1.0
species: metaid species 32
type: SpeciesReference

172821
stoichiometry: 1.0
species: metaid species 15
type: SpeciesReference

283649
value: 17.2
name: k1
type: LocalParameter

173088
stoichiometry: 1.0
species: metaid species 11
type: SpeciesReference

metaid species 22
is: CHEBI:15721
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.06
initial amount: NaN
in compartment: metaid compartment 1
name: sedoheptulose 7-phosphate
type: Species

metaid species 12
is: CHEBI:17754
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.437
initial amount: NaN
in compartment: metaid compartment 1
name: glycerol
type: Species

173554
stoichiometry: 1.0
species: metaid species 25
type: SpeciesReference

172747
stoichiometry: 1.0
species: metaid species 12
type: SpeciesReference

172408
stoichiometry: 1.0
species: metaid species 3
type: SpeciesReference

173028
stoichiometry: 1.0
species: metaid species 21
type: SpeciesReference

283629
value: 2.5
name: k1
type: LocalParameter

172772
stoichiometry: 1.0
species: metaid species 11
type: SpeciesReference

metaid species 23
is: CHEBI:48153
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.004
initial amount: NaN
in compartment: metaid compartment 1
name: erythrose 4-phosphate
type: Species

283669
value: 1.0
name: k1
type: LocalParameter

283648
value: 0.0191
name: k2
type: LocalParameter

173470
stoichiometry: 1.0
species: metaid species 13
type: SpeciesReference

172324
exponent: 1.0
scale: -6
multipler: 1.0
kind: MOLE
type: SBMLUnit

283628
value: 0.01
name: k2
type: LocalParameter

metaid species 24
is: CHEBI:24996
constant: false
boundary condition: false
has only substance units: false
initial concentration: 6.4
initial amount: NaN
in compartment: metaid compartment 1
name: lactate
type: Species

283647
value: 0.191
name: k1
type: LocalParameter

172588
stoichiometry: 1.0
species: metaid species 8
type: SpeciesReference

172735
stoichiometry: 1.0
species: metaid species 10
type: SpeciesReference

172833
stoichiometry: 1.0
species: metaid species 14
type: SpeciesReference

172674
stoichiometry: 1.0
species: metaid species 10
type: SpeciesReference

173076
stoichiometry: 1.0
species: metaid species 22
type: SpeciesReference

metaid species 10
is: CHEBI:16108
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0352
initial amount: NaN
in compartment: metaid compartment 1
name: dihydroxyacetone 3-phosphate
type: Species

283609
kinetic law: 173542
product: 173530
reactant: 173518
fast: false
reversible: false
name: reaction 26
type: Reaction

173016
stoichiometry: 1.0
species: metaid species 19
type: SpeciesReference

metaid species 25
is: CHEBI:15351
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.1
initial amount: NaN
in compartment: metaid compartment 1
name: acetyl-CoA
type: Species

283627
value: 0.36
name: k1
type: LocalParameter

283579
kinetic law: 172600
product: 172588
reactant: 172576
fast: false
reversible: true
name: Phosphoglucose Isomerase
type: Reaction

283677
value: 0.78
name: k1
type: LocalParameter

172312
unit: 172324
name: micromole per 0.5g wet weight of tissue
type: SBMLUnitsDef

173614
stoichiometry: 1.0
species: metaid species 25
type: SpeciesReference

172943
stoichiometry: 1.0
species: metaid species 18
type: SpeciesReference

172980
stoichiometry: 1.0
species: metaid species 19
type: SpeciesReference

173302
stoichiometry: 1.0
species: metaid species 26
type: SpeciesReference

173662
stoichiometry: 1.0
species: metaid species 31
type: SpeciesReference

172528
stoichiometry: 1.0
species: metaid species 6
type: SpeciesReference

283663
value: 2.75
name: k2
type: LocalParameter

283636
value: 75.6
name: k2
type: LocalParameter

173518
stoichiometry: 1.0
species: metaid species 16
type: SpeciesReference

metaid species 2
is: CHEBI:17234
constant: false
boundary condition: true
has only substance units: false
initial concentration: 50.0
initial amount: NaN
in compartment: metaid compartment 2
name: glucose (outside cell)
type: Species

283626
value: 0.1
name: k2
type: LocalParameter

283590
kinetic law: 172895
product: 172882
reactant: 172870
fast: false
reversible: true
name: 6-Phosphogluconolactonase
type: Reaction

283578
kinetic law: 172564
product: 172552
reactant: 172540
reactant: 172528
fast: false
reversible: true
name: reaction 5
type: Reaction

283678
value: 1.12E-4
name: k2
type: LocalParameter

172613
stoichiometry: 1.0
species: metaid species 8
type: SpeciesReference

283664
value: 20.5
name: k1
type: LocalParameter

172845
stoichiometry: 1.0
species: metaid species 16
type: SpeciesReference

172576
stoichiometry: 1.0
species: metaid species 6
type: SpeciesReference

173064
stoichiometry: 1.0
species: metaid species 21
type: SpeciesReference

283635
value: 30.0
name: k1
type: LocalParameter

172662
stoichiometry: 1.0
species: metaid species 11
type: SpeciesReference

173578
stoichiometry: 1.0
species: metaid species 30
type: SpeciesReference

172360
stoichiometry: 1.0
species: metaid species 2
type: SpeciesReference

metaid species 1
is: CHEBI:17234
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.0E-9
initial amount: NaN
in compartment: metaid compartment 1
name: glucose (inside cell)
type: Species

283591
fast: false
reactant: 172919
kinetic law: 172968
reversible: true
product: 172956
product: 172943
reactant: 172907
product: 172931
type: Reaction
name: 6-Phosphogluconate dehydrogenase

283675
value: 0.05
name: k1
type: LocalParameter

172650
stoichiometry: 1.0
species: metaid species 9
type: SpeciesReference

283665
value: 19.5
name: k2
type: LocalParameter

173626
stoichiometry: 1.0
species: metaid species 27
type: SpeciesReference

172931
stoichiometry: 1.0
species: metaid species 19
type: SpeciesReference

283638
value: 225.0
name: k1
type: LocalParameter

283624
value: 1.667
name: k1
type: LocalParameter

173350
stoichiometry: 1.0
species: metaid species 27
type: SpeciesReference

283676
value: 0.015
name: k1
type: LocalParameter

283666
value: 0.03
name: k1
type: LocalParameter

metaid species 20
is: CHEBI:17797
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.5
initial amount: NaN
in compartment: metaid compartment 1
name: ribose 5-phosphate
type: Species

173566
stoichiometry: 1.0
species: metaid species 16
type: SpeciesReference

173237
stoichiometry: 1.0
species: metaid species 13
type: SpeciesReference

172372
stoichiometry: 1.0
species: metaid species 1
type: SpeciesReference

173052
stoichiometry: 1.0
species: metaid species 20
type: SpeciesReference

ORG:
  orgname: University of Manchester
n:
  given: Edward
  family: Kent

orgname: University of Manchester

given: Natalie
family: Stanford

given: Natalie
family: Stanford

orgname: University of Manchester

ORG:
  orgname: University of Manchester
n:
  given: Natalie
  family: Stanford

W3 CDTF: Thu Feb 02 18:12:05 GMT 2012

ORG:
  orgname: University of Manchester
n:
  given: Kieran
  family: Smallbone

orgname: University of Manchester

W3 CDTF: Thu Feb 02 18:12:05 GMT 2012

ORG:
  orgname: University of Manchester
n:
  given: Holly
  family: Summersgill

W3 CDTF: Thu Feb 02 18:12:05 GMT 2012

W3 CDTF: Thu Apr 09 01:00:00 BST 2009

W3 CDTF: Thu Feb 02 18:12:05 GMT 2012

ORG:
  orgname: University of Manchester
n:
  given: Edward
  family: Kent

given: Edward
family: Kent

given: Holly
family: Summersgill

ORG:
  orgname: University of Manchester