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meta s 1399
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meta s 0299
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meta r 0682
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meta s 1242
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meta s 0297
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meta r 1206
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reversible: true
type: Reaction

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stoichiometry: 1.0
species: meta s 0255
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is: SBO:0000281
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value: 2.0
type: LocalParameter

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is: SBO:0000324
value: 6.81893240258726
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1477
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stoichiometry: 1.0
species: meta s 1768
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is: SBO:0000323
value: 0.1
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units: dimensionless
value: 0.0256671508442138
type: LocalParameter

meta e 0263
type: Species
name: aroG
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in compartment: meta cell
is: P0AB91
boundary condition: true
initial amount: NaN
is encoded by: eco:b0754
is: SBO:0000252
initial concentration: 0.001
constant: true

http://identifiers.org/biomodels.db/BIOMD0000000470#abfb36fb_73cb_48aa_89b5_3b7b20bbaa32
stoichiometry: 1.0
species: meta s 0330
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is: SBO:0000324
value: 3.87846855038663E-6
type: LocalParameter

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stoichiometry: 0.2151
species: meta s 0945
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stoichiometry: 0.2905
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value: 0.1
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stoichiometry: 1.0
species: meta s 0384
type: SpeciesReference

meta r 1205
fast: false
is: SBO:0000176
is: http://identifiers.org/ec-code/3.6.1.31
name: phosphoribosyl-ATP pyrophosphatase
reversible: true
type: Reaction

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is: SBO:0000322
value: 0.1
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stoichiometry: 1.0
species: meta s 0233
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is: SBO:0000322
value: 0.1
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is: SBO:0000323
value: 0.1
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units: dimensionless
value: 0.0343363591698377
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meta e 1045
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boundary condition: true
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constant: true
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is encoded by: eco:b3433

meta e 0264
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constant: true
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type: Species
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is encoded by: eco:b0755

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stoichiometry: 1.0
species: meta s 0565
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meta s 0536
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constant: false
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initial concentration: 0.1
is: SBO:0000247
initial amount: NaN
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type: Species
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notes: iJO1366:M_cit_c
boundary condition: false
has only substance units: false

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is: SBO:0000322
value: 0.1
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units: dimensionless
value: 0.492899539861318
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name: IscU with bound [2Fe-2S] cluster
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is: SBO:0000247
notes: iJO1366:M_iscu_DASH_2fe2s_c
initial concentration: 0.1
type: Species
constant: false
initial amount: NaN
boundary condition: false

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0395
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meta r 1204
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type: Reaction
is: SBO:0000176
is: http://identifiers.org/ec-code/3.5.4.19
fast: false
reversible: true

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 0539
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notes: iJO1366:M_cmp_c
constant: false
in compartment: meta cell
is: SBO:0000247
has only substance units: false
initial concentration: 0.1
is: CHEBI:60377
boundary condition: false
type: Species
name: CMP

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units: dimensionless
value: 4.94227707563336E-4
type: LocalParameter

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is: SBO:0000322
value: 0.1
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name: mmol
type: SBMLUnitsDef

http://identifiers.org/biomodels.db/BIOMD0000000470#_25821670_cd1d_412e_8571_fa1bf0d43648
stoichiometry: 1.0
species: meta s 1211
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is: SBO:0000324
value: 0.43671278919927
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stoichiometry: 1.0
species: meta s 1333
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units: dimensionless
value: 0.00787329117099173
type: LocalParameter

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is: SBO:0000324
value: 0.00441757568656888
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stoichiometry: 1.0
species: meta s 0421
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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0785
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stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

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units: dimensionless
value: 4.63338475844011E-5
type: LocalParameter

meta e 0042
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type: Species
initial concentration: 0.001
constant: true
is encoded by: eco:b0091
initial amount: NaN
is: SBO:0000252
boundary condition: true
is: P17952
in compartment: meta cell

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units: dimensionless
value: 0.0306260499279916
type: LocalParameter

meta s 1806
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constant: true
is: CHEBI:29105
boundary condition: true
name: Zinc
type: Species
is: SBO:0000247
notes: iJO1366:M_zn2_e
in compartment: meta extracellular
has only substance units: false
initial concentration: 1.0

meta s 0875
constant: false
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name: Fumarate
is: C00122
in compartment: meta cell
boundary condition: false
initial concentration: 0.1
is: CHEBI:29806
initial amount: NaN
type: Species
notes: iJO1366:M_fum_c
has only substance units: false

http://identifiers.org/biomodels.db/BIOMD0000000470#cd122fb7_f125_4e0c_9f0e_a5eafa2c5dc2
stoichiometry: 1.0
species: meta s 1040
type: SpeciesReference

meta r 1201
type: Reaction
reversible: true
is: SBO:0000176
is: http://identifiers.org/ec-code/4.1.1.36
fast: false
name: phosphopantothenoylcysteine decarboxylase

http://identifiers.org/biomodels.db/BIOMD0000000470#_0224c764_cec2_4db2_88c9_e41fdc771cf7
is: SBO:0000322
value: 0.1
type: LocalParameter

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units: dimensionless
value: 2.77033467884759E-7
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0097
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meta e 0813
name: glyA
is: P0A825
type: Species
is: SBO:0000252
initial amount: NaN
initial concentration: 0.001
in compartment: meta cell
constant: true
has only substance units: false
is encoded by: eco:b2551
boundary condition: true

meta e 0041
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is encoded by: eco:b0090
is: P17443
type: Species
boundary condition: true
initial amount: NaN
is: SBO:0000252
in compartment: meta cell
constant: true
has only substance units: false
initial concentration: 0.001

http://identifiers.org/biomodels.db/BIOMD0000000470#_5039ba3d_1e53_4815_95e2_1c3c5cffefa3
stoichiometry: 1.0
species: meta s 1327
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_1088b223_7568_4a53_8715_6e70c7b9d742
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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stoichiometry: 0.01946
species: meta s 1033
type: SpeciesReference

meta r 1202
fast: false
type: Reaction
is: SBO:0000176
reversible: true
name: phosphopentomutase
is: http://identifiers.org/ec-code/5.4.2.7

http://identifiers.org/biomodels.db/BIOMD0000000470#_6edbfef3_547f_4ffd_9349_cd1d48df868b
is: SBO:0000281
units: dimensionless
value: 2.0
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is: SBO:0000324
value: 0.141719241077851
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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units: dimensionless
value: 0.0745129994030467
type: LocalParameter

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is: SBO:0000323
value: 0.1
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is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_9a42f097_7973_40d5_b4ab_a674e0a7829b
stoichiometry: 1.0
species: meta s 0233
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stoichiometry: 1.0
species: meta s 1609
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is: SBO:0000323
value: 0.1
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http://identifiers.org/biomodels.db/BIOMD0000000470#f696d618_5d57_4c59_811c_872d52543c81
stoichiometry: 1.0
species: meta s 1072
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is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 1804
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initial amount: NaN
is: C00038
name: Zinc
is: CHEBI:29105
type: Species
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constant: false
is: SBO:0000247
notes: iJO1366:M_zn2_c
boundary condition: false
in compartment: meta cell

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is: SBO:0000322
value: 0.1
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meta e 0040
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initial concentration: 0.001
type: Species
constant: true
boundary condition: true
is: P14900
initial amount: NaN
is: SBO:0000252
name: murD
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is encoded by: eco:b0088

http://identifiers.org/biomodels.db/BIOMD0000000470#_6daac6f2_7513_483c_9dcd_7b9e9f82799c
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 0815
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initial concentration: 0.001
in compartment: meta cell
initial amount: NaN
has only substance units: false
boundary condition: true
is: P15254
is: SBO:0000252
type: Species

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stoichiometry: 1.0
species: meta s 1009
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units: dimensionless
value: 3.08892317229363E-5
type: LocalParameter

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stoichiometry: 1.0
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stoichiometry: 1.0
species: meta s 0920
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is: SBO:0000322
value: 0.1
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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0994
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meta e 0903
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constant: true
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is encoded by: eco:b2874
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meta r 1200
name: phosphopantothenate-cysteine ligase
is: http://identifiers.org/ec-code/6.3.2.5
fast: false
type: Reaction
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is: SBO:0000176

http://identifiers.org/biomodels.db/BIOMD0000000470#_9d4704a2_aea3_4436_8475_fa0cf95feb30
stoichiometry: 1.0
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is: SBO:0000323
value: 0.1
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stoichiometry: 1.0
species: meta s 1211
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value: 0.1
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units: dimensionless
value: 3.15541120476312E-4
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is: SBO:0000323
value: 0.1
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stoichiometry: 1.0
species: meta s 0790
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meta r 0687
is: SBO:0000176
name: Glutamyl-tRNA synthetase
reversible: true
type: Reaction
fast: false
is: http://identifiers.org/ec-code/6.1.1.17

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is: SBO:0000323
value: 0.1
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stoichiometry: 1.0
species: meta s 1334
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meta e 0046
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constant: true
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is: SBO:0000252
has only substance units: false
initial concentration: 0.001

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is: SBO:0000323
value: 0.1
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stoichiometry: 2.0
species: meta s 0862
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is: SBO:0000322
value: 0.1
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is: SBO:0000322
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is: SBO:0000324
value: 6.48673864504249E-4
type: LocalParameter

meta s 1670
is: C03221
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constant: false
is: CHEBI:57330
type: Species
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initial amount: NaN
is: SBO:0000247
notes: iJO1366:M_dd2coa_c
name: trans-Dodec-2-enoyl-CoA
initial concentration: 0.1
boundary condition: false

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0994
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is: SBO:0000324
value: 0.641479307008144
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stoichiometry: 0.02617
species: meta s 0805
type: SpeciesReference

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_28620f96_2d98_49f1_8597_c7c555c059bc
units: dimensionless
value: 4.47E-4
type: LocalParameter

meta e 0045
boundary condition: true
is encoded by: eco:b0099
type: Species
in compartment: meta cell
name: mutT
is: P08337
has only substance units: false
initial concentration: 0.001
is: SBO:0000252
constant: true
initial amount: NaN

http://identifiers.org/biomodels.db/BIOMD0000000470#c9467bb7_04ca_439f_98e4_774791575e4b
is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1179
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#ba39aa0e_df85_45db_bf29_34efc839c582
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_59f51ed1_e8e2_4e7a_8cbf_60e89bdfb9a0
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#a07091c1_9544_42ca_a02d_4ad17d82645f
stoichiometry: 1.0
species: meta s 0454
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_50c1b088_136c_481c_b5cb_3c1d11befe28
units: dimensionless
value: 0.2411
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e4f688e0_51c8_4d8b_a294_a494223ef11b
is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 0044
is: SBO:0000252
boundary condition: true
initial amount: NaN
type: Species
name: lpxC
constant: true
in compartment: meta cell
is: P0A725
has only substance units: false
is encoded by: eco:b0096
initial concentration: 0.001

http://identifiers.org/biomodels.db/BIOMD0000000470#_156fd60f_cf4d_4415_89bd_1cb5f84d90ec
type: Reaction
reversible: true
is: SBO:0000176
name: Dihydroneopterin triphosphate pyrophosphatase
fast: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_07f6df02_7f34_44d8_a689_129de1b887a3
stoichiometry: 1.0
species: meta s 0543
type: SpeciesReference

meta r 0684
fast: false
is: http://identifiers.org/ec-code/2.6.1.16
type: Reaction
reversible: true
is: SBO:0000176
name: glutamine-fructose-6-phosphate transaminase

meta s 1672
constant: false
initial concentration: 0.1
name: trans-Hex-2-enoyl-CoA
notes: iJO1366:M_hx2coa_c
has only substance units: false
is: CHEBI:62077
is: C05271
type: Species
initial amount: NaN
is: SBO:0000247
in compartment: meta cell
boundary condition: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_21f07ac8_76f9_4699_985e_71341e659dec
is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 0530
is: CHEBI:16383
is: C00417
in compartment: meta cell
initial amount: NaN
notes: iJO1366:M_acon_DASH_C_c
type: Species
boundary condition: false
is: SBO:0000247
name: cis-Aconitate
constant: false
initial concentration: 0.1
has only substance units: false

http://identifiers.org/biomodels.db/BIOMD0000000470#f1b750e4_0556_4933_a31c_70dec3f79a21
stoichiometry: 1.0
species: meta s 1333
type: SpeciesReference

meta e 0819
initial amount: NaN
type: Species
in compartment: meta cell
is: SBO:0000252
constant: true
is: P10902
has only substance units: false
boundary condition: true
name: nadB
is encoded by: eco:b2574
initial concentration: 0.001

http://identifiers.org/biomodels.db/BIOMD0000000470#deefd4c9_8267_44e7_aa30_ca1b66236f83
stoichiometry: 1.0
species: meta s 0369
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#d9e1b9d5_b53a_430b_a51a_13c4b36d4805
units: dimensionless
value: 9.26676951688061E-5
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_5aa7a3e4_5510_4234_8ad4_103820189661
stoichiometry: 1.0
species: meta s 0575
type: SpeciesReference

meta r 0683
reversible: true
is: SBO:0000176
fast: false
name: glutamine synthetase
is: http://identifiers.org/ec-code/6.3.1.2
type: Reaction

meta e 0043
has only substance units: false
initial concentration: 0.001
is: P07862
initial amount: NaN
is: SBO:0000252
constant: true
boundary condition: true
is encoded by: eco:b0092
type: Species
in compartment: meta cell
name: ddlB

http://identifiers.org/biomodels.db/BIOMD0000000470#_94a9ed4a_e553_42c3_a12a_eaa5c1fb8186
stoichiometry: 1.0
species: meta s 0201
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_7566810f_6c17_41c7_bb4c_c8a11f12ac19
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#efaef220_2422_4360_b565_d11ac421c3ba
units: dimensionless
value: 0.0867932004720827
type: LocalParameter

meta r 0538
fast: false
reversible: true
type: Reaction
name: enolase
is: SBO:0000176
is: http://identifiers.org/ec-code/4.2.1.11

meta e 0818
initial amount: NaN
initial concentration: 0.001
constant: true
is encoded by: eco:b2564
name: pdxJ
is: P0A794
in compartment: meta cell
is: SBO:0000252
type: Species
has only substance units: false
boundary condition: true

http://identifiers.org/biomodels.db/BIOMD0000000470#ee446183_a4c0_4f4e_bee2_d005a5e8d52f
is: SBO:0000281
value: 20.0
type: LocalParameter

meta s 1250
type: Species
is: C00132
notes: iJO1366:M_meoh_e
boundary condition: true
initial concentration: 0.0
constant: true
is: CHEBI:17790
has only substance units: false
in compartment: meta extracellular
name: Methanol
initial amount: NaN
is: SBO:0000247

http://identifiers.org/biomodels.db/BIOMD0000000470#e26487e1_468b_4f01_8a50_5533fe4b3e6c
is: SBO:0000324
value: 0.298496636328855
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_32675537_482e_493b_8b9d_e59c325de00c
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_6835aaf3_4abf_49c8_be0c_34f3511d27dd
is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 1674
in compartment: meta cell
type: Species
initial concentration: 0.1
boundary condition: false
notes: iJO1366:M_hdd2coa_c
is: SBO:0000247
is version of: CHEBI:61526
constant: false
is version of: C05272
initial amount: NaN
name: trans-Hexadec-2-enoyl-CoA
has only substance units: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_117f9fec_76b1_422b_8dce_ad1bd295cd62
units: dimensionless
value: 0.0343363591698208
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_58caa15a_d251_4ae3_ac23_4d0d4bfccca6
stoichiometry: 1.0
species: meta s 1334
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#aa273b50_ee9e_4a14_b42f_9761d9c42db1
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_8c01d0ac_3bfe_4d3f_9c0d_b06572dec789
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ff7d9b90_98e4_4f30_b047_49f3fd74fa70
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_051abe56_526b_4aff_af1a_7e21badf6bbc
stoichiometry: 1.0
species: meta s 0659
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_8f7267ec_3fab_4bec_a3d0_698444136bdd
is: SBO:0000281
value: 20.0
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ee1db827_0e70_46bd_9f7f_22550da8eb5c
stoichiometry: 1.0
species: meta s 0526
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_837a120c_3f3c_4157_8372_b577a07322f3
units: dimensionless
value: 4.94227707563336E-4
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e4f96e2c_5280_4732_8b66_ee842c9b4fe4
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_23135eb2_0c1a_4f29_b783_3af9cf56405e
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#db2f52e8_fa9f_43d5_b3b1_da49580c9431
is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.527963458177373
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_84dc6170_1479_4d12_b550_af768144e986
units: dimensionless
value: 3.08892317222945E-5
type: LocalParameter

meta s 1676
notes: iJO1366:M_oc2coa_c
type: Species
in compartment: meta cell
has only substance units: false
is: CHEBI:62242
name: trans-Oct-2-enoyl-CoA
boundary condition: false
is: C05276
initial concentration: 0.1
is: SBO:0000247
constant: false
initial amount: NaN

http://identifiers.org/biomodels.db/BIOMD0000000470#_2876798e_ed22_4cc6_84b6_6ec235a5692d
is: SBO:0000324
value: 0.379555336350422
type: LocalParameter

meta s 0421
name: ADP
boundary condition: false
in compartment: meta cell
notes: iJO1366:M_adp_c
type: Species
constant: false
is: SBO:0000247
initial amount: NaN
is: CHEBI:456216
initial concentration: 0.1
has only substance units: false
is: C00008

http://identifiers.org/biomodels.db/BIOMD0000000470#_1a71696f_2768_43d8_a431_e73ab6947c12
stoichiometry: 1.0
species: meta s 0467
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_89684707_18bd_47bd_9455_35831cc147f6
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#f6bdc6ac_4e31_42b2_9148_1934a62fa878
stoichiometry: 1.0
species: meta s 0194
type: SpeciesReference

meta e 0048
in compartment: meta cell
is: SBO:0000252
boundary condition: true
is encoded by: eco:b0109
initial amount: NaN
constant: true
name: nadC
initial concentration: 0.001
has only substance units: false
is: P30011
type: Species

http://identifiers.org/biomodels.db/BIOMD0000000470#_38236abe_e99a_42f6_aa14_54b3795735bc
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#d517c1f2_f10b_4dd6_bdd8_20c19996ab80
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_1ed9bdc4_37c7_4fb4_8732_504bea01a1a0
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_5188b2cc_8154_472f_b13d_947cc97c7387
stoichiometry: 1.0
species: meta s 0526
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_592911d2_3d13_4d54_9d58_599b6d10d714
stoichiometry: 1.0
species: meta s 0155
type: SpeciesReference

meta r 0257
is: http://identifiers.org/ec-code/6.2.1.20
type: Reaction
is: SBO:0000176
fast: false
name: acyl-[acyl-carrier-protein] synthetase (n-C12:0)
reversible: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_4e0a419d_5130_49b0_98b7_28905065cc90
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_25ad8d49_e0d0_47d7_9494_3ca4f7c45670
stoichiometry: 0.007808
species: meta s 0841
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#c8266924_2ccd_4f9b_8248_4708c85ab486
stoichiometry: 1.0
species: meta s 1075
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_9d23b509_fe0c_42d2_9851_ff807199ce87
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 1353
type: Reaction
fast: false
reversible: true
is: SBO:0000176
is: http://identifiers.org/ec-code/2.1.1.45
name: thymidylate synthase

http://identifiers.org/biomodels.db/BIOMD0000000470#f96f3312_fe59_4be9_aeba_73d045cb5054
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_5389c8b6_82ce_4f41_b0c5_a2922a3059ed
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_81b60136_118b_4904_baad_90fccd527467
units: dimensionless
value: 0.0492981056959303
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_2be8b6d1_ae71_4f40_892b_c69506d258d3
stoichiometry: 1.0
species: meta s 1336
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#bc160bb5_48f0_4acc_a9e3_c461dc7ddc7e
is: SBO:0000324
value: 0.763399980336918
type: LocalParameter

meta r 0533
is: http://identifiers.org/ec-code/3.6.1.23
name: dUTP diphosphatase
type: Reaction
fast: false
is: SBO:0000176
reversible: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_3500b1b6_22a1_4989_8958_a632ef069a47
is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 1358
type: Reaction
is: http://identifiers.org/ec-code/2.2.1.1
name: transketolase
is: SBO:0000176
reversible: true
fast: false

meta s 0984
is: CHEBI:62620
in compartment: meta cell
is: SBO:0000247
initial concentration: 0.1
notes: iJO1366:M_hxcoa_c
is: C05270
initial amount: NaN
has only substance units: false
name: Hexanoyl-CoA (n-C6:0CoA)
constant: false
type: Species
boundary condition: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_9e177c2a_df14_4064_a05f_96d7f0e91451
units: dimensionless
value: 0.0250597549648415
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_7a4534aa_55a9_42bc_b23b_243067249182
is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 1150
type: Species
initial amount: NaN
initial concentration: 0.001
boundary condition: true
is encoded by: eco:b3730
in compartment: meta cell
has only substance units: false
is: SBO:0000252
is: P0ACC7
name: glmU
constant: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_5c03514e_1e54_46e6_a2e4_d4c01c541180
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_57bf2049_d50f_4ee4_8d41_46c9260d6132
stoichiometry: 1.0
species: meta s 1110
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#b50d7d3b_974c_449f_99c1_859ee5c299a8
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_4f0be37b_3863_47f5_8ef7_f7fb045ef5e3
stoichiometry: 1.0
type: SpeciesReference

meta r 0532
reversible: true
fast: false
is: SBO:0000176
type: Reaction
is: http://identifiers.org/ec-code/2.7.4.9
name: dTMP kinase

http://identifiers.org/biomodels.db/BIOMD0000000470#_9903c70b_71fa_43a9_baee_42dd4745383b
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_2d97825e_d93f_49b9_a686_7791ac502323
is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_3ee596fb_4f05_468a_be32_b85f48f3a799
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#a3e32530_0098_4083_8dad_cd917f2e0033
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e15f6ab2_07e2_474a_b690_06750997ad27
is: SBO:0000324
value: 9.26676951688089E-4
type: LocalParameter

meta r 1356
is: http://identifiers.org/ec-code/2.2.1.2
reversible: true
fast: false
type: Reaction
name: transaldolase
is: SBO:0000176

http://identifiers.org/biomodels.db/BIOMD0000000470#_77f441ac_fd7e_4dcf_aa61_ef784c9e3d40
stoichiometry: 1.0
species: meta s 0867
type: SpeciesReference

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units: dimensionless
value: 0.0362397868726823
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_35e142dd_8023_4b17_8899_74fca3ff779e
stoichiometry: 1.0
species: meta s 0838
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_9d1112d4_381b_430a_8430_76b7fd466684
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_2094311f_997e_4edf_a599_2cdee7ed786b
stoichiometry: 1.0
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1531
type: SpeciesReference

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_794f2dd8_6181_4858_bb12_06d882062354
stoichiometry: 1.0
species: meta s 1550
type: SpeciesReference

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 1.127368030143
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_23cabe2d_d411_458c_b51b_2c6595d063d7
stoichiometry: 1.0
species: meta s 0976
type: SpeciesReference

meta r 1357
reversible: true
type: Reaction
name: transketolase
is: SBO:0000176
is: http://identifiers.org/ec-code/2.2.1.1
fast: false

http://identifiers.org/biomodels.db/BIOMD0000000470#b1d5ebc8_c542_48b5_8f04_91555539dc35
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_0241b53d_e94f_4675_98cf_879ae5294aba
value: 0.1
type: LocalParameter

meta e 0277
boundary condition: true
is encoded by: eco:b0777
in compartment: meta cell
initial amount: NaN
has only substance units: false
constant: true
name: bioC
is: SBO:0000252
is: P12999
initial concentration: 0.001
type: Species

http://identifiers.org/biomodels.db/BIOMD0000000470#_4237a4fb_d438_47f9_aa92_513a01ca2e01
name: fatty-acid-CoA thioesterase (dodecanoate)
type: Reaction
fast: false
is: SBO:0000176
reversible: true

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is: SBO:0000324
value: 0.480709028377728
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1334
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 1349
fast: false
is: SBO:0000176
reversible: true
is: http://identifiers.org/ec-code/4.2.3.1
type: Reaction
name: threonine synthase

http://identifiers.org/biomodels.db/BIOMD0000000470#_4e2f2aa2_e303_4f21_8e38_50ad36d161cb
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta e 0278
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initial amount: NaN
name: bioD1
has only substance units: false
is: SBO:0000252
is: P13000
is encoded by: eco:b0778
initial concentration: 0.001
type: Species
boundary condition: true
constant: true

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stoichiometry: 1.0
species: meta s 0663
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 1537
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000281
value: 0.2
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta r 0105
fast: false
reversible: true
is: SBO:0000176
is: http://identifiers.org/ec-code/2.7.7.38
name: 3-deoxy-manno-octulosonate cytidylyltransferase
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000470#_8dd430af_bf26_4be5_8410_4c647f063992
is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1333
type: SpeciesReference

meta r 1348
name: Threonine aldolase
reversible: true
is: SBO:0000176
fast: false
type: Reaction
is: http://identifiers.org/ec-code/4.1.2.5

meta r 0102
reversible: true
fast: false
type: Reaction
name: 3-deoxy-D-manno-octulosonic acid transferase
is: SBO:0000176

meta e 0279
initial amount: NaN
has only substance units: false
type: Species
name: moaA
initial concentration: 0.001
boundary condition: true
is: P30745
is encoded by: eco:b0781
in compartment: meta cell
constant: true
is: SBO:0000252

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is: SBO:0000324
value: 1.35125789124084
type: LocalParameter

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units: dimensionless
value: 3.08892317229363E-5
type: LocalParameter

meta e 1167
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name: ilvE
type: Species
constant: true
is encoded by: eco:b3770
boundary condition: true
initial amount: NaN
is: P0AB80
is: SBO:0000252
has only substance units: false
initial concentration: 0.001

http://identifiers.org/biomodels.db/BIOMD0000000470#b6ff34bb_8155_459e_bd1a_c99f76efdf5c
is: SBO:0000323
value: 0.1
type: LocalParameter

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name: Octaprenyl pyrophosphate synthase
type: Reaction
is: SBO:0000176
fast: false
reversible: true

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units: dimensionless
value: 0.0402391112803253
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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units: dimensionless
value: 3.85076521030325E-5
type: LocalParameter

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units: dimensionless
value: 0.0213211883092039
type: LocalParameter

meta r 0103
reversible: true
type: Reaction
name: 3-deoxy-D-manno-octulosonic acid transferase
is: SBO:0000176
fast: false

meta r 0999
is: http://identifiers.org/ec-code/2.3.1.1
type: Reaction
name: N-acetylglutamate synthase
is: SBO:0000176
fast: false
reversible: true

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stoichiometry: 1.0
species: meta s 1100
type: SpeciesReference

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1397
type: SpeciesReference

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units: dimensionless
value: 0.912233393077452
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0098
type: SpeciesReference

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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_08958008_3ca6_40cb_8e51_5f52fe2c9f9d
is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 1169
in compartment: meta cell
initial amount: NaN
is: SBO:0000252
boundary condition: true
name: ilvA
is: P04968
initial concentration: 0.001
has only substance units: false
type: Species
constant: true
is encoded by: eco:b3772

meta r 0996
type: Reaction
name: N-acetyl-g-glutamyl-phosphate reductase
is: SBO:0000176
fast: false
is: http://identifiers.org/ec-code/1.2.1.38
reversible: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_5af6b30e_b1f1_45ae_93d3_6f35f8b7be28
type: Reaction
is: SBO:0000176
fast: false
reversible: true
name: pyridoxine 5'-phosphate oxidase (anaerboic

http://identifiers.org/biomodels.db/BIOMD0000000470#_6c1b2f58_6b48_4006_9800_aefdefd75533
type: Species
boundary condition: false
notes: iJO1366:M_iscu_DASH_2fe2s2_c
in compartment: meta cell
name: IscU with two bound [2Fe-2S] clusters
is: SBO:0000247
has only substance units: false
initial concentration: 0.1
constant: false
initial amount: NaN

meta s 0395
name: Acetyl-CoA
boundary condition: false
notes: iJO1366:M_accoa_c
has only substance units: false
initial amount: NaN
constant: false
is: SBO:0000247
is: C00024
initial concentration: 0.1
type: Species
is: CHEBI:57288
in compartment: meta cell

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0343
type: SpeciesReference

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is: SBO:0000281
value: 0.2
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_083a34de_eaaf_4a70_a9da_087e18c92717
stoichiometry: 1.0
species: meta s 0041
type: SpeciesReference

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units: dimensionless
value: 0.052796345817737
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_0ba98427_307f_4237_a249_7b86e0fe841d
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_6a6e3e35_ce4b_4b2d_81a2_d698490044d4
is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 1168
initial concentration: 0.001
is encoded by: eco:b3771
has only substance units: false
type: Species
name: ilvD
is: P05791
in compartment: meta cell
constant: true
initial amount: NaN
is: SBO:0000252
boundary condition: true

http://identifiers.org/biomodels.db/BIOMD0000000470#b493abc7_8364_4536_bcc9_f7cfc19f1a5e
is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0233
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_70384862_f854_4044_b82b_b00554543d7c
stoichiometry: 1.0
species: meta s 1112
type: SpeciesReference

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is: SBO:0000281
value: 0.2
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.00296536624538002
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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is: SBO:0000324
value: 8.6683772294105E-4
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.690173479743024
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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units: dimensionless
value: 4.94227707563336E-4
type: LocalParameter

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units: dimensionless
value: 0.0721728976957654
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 0106
fast: false
name: 3-deoxy-manno-octulosonate-8-phosphatase
type: Reaction
is: http://identifiers.org/ec-code/3.1.3.45
reversible: true
is: SBO:0000176

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is: SBO:0000324
value: 0.359340111818993
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#f57262c4_a911_4635_96ed_2235cdfc9417
value: 0.1
type: LocalParameter

meta s 0397
initial concentration: 0.1
in compartment: meta cell
is: CHEBI:18359
boundary condition: false
notes: iJO1366:M_ACP_c
initial amount: NaN
constant: false
has only substance units: false
is: SBO:0000247
name: acyl carrier protein
type: Species
is: C00229

http://identifiers.org/biomodels.db/BIOMD0000000470#_619065fa_04ff_4d1a_9b43_1c3189fa9dcb
is: SBO:0000322
value: 1.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_65c208ff_18c9_4933_9afc_d52a83eec3cd
stoichiometry: 1.0
species: meta s 0395
type: SpeciesReference

meta s 0435
notes: iJO1366:M_octdp_c
in compartment: meta cell
has only substance units: false
type: Species
initial concentration: 0.1
is: C04146
constant: false
initial amount: NaN
is: SBO:0000247
name: all-trans-Octaprenyl diphosphate
boundary condition: false
is: CHEBI:57711

http://identifiers.org/biomodels.db/BIOMD0000000470#_77081031_6e7e_4eee_97d0_de9fdd4f8a86
units: dimensionless
value: 0.230942094325926
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_3fec2191_f4b1_4888_ad0c_dd67b6743c77
stoichiometry: 1.0
type: SpeciesReference

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is: SBO:0000323
value: 0.1
type: LocalParameter

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units: dimensionless
value: 0.0414265806134143
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0467
type: SpeciesReference

meta e 0608
is: P06987
is encoded by: eco:b2022
in compartment: meta cell
initial amount: NaN
constant: true
is: SBO:0000252
initial concentration: 0.001
has only substance units: false
name: hisB
type: Species
boundary condition: true

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1095
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is: SBO:0000281
value: 0.2
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ddac1153_8222_42c5_9877_2985971666b0
stoichiometry: 1.0
species: meta s 1752
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stoichiometry: 1.0
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stoichiometry: 1.0
species: meta s 1072
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is: SBO:0000323
value: 0.1
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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 0609
initial amount: NaN
is: P60595
is: SBO:0000252
initial concentration: 0.001
has only substance units: false
type: Species
constant: true
boundary condition: true
is encoded by: eco:b2023
in compartment: meta cell
name: hisH

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units: dimensionless
value: 9.32217621775477E-5
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0018
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is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 0546
is: CHEBI:27638
initial concentration: 0.1
notes: iJO1366:M_cobalt2_c
is: SBO:0000247
constant: false
is: C00175
name: Co2+
in compartment: meta cell
boundary condition: false
initial amount: NaN
has only substance units: false
type: Species

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stoichiometry: 1.0
species: meta s 1336
type: SpeciesReference

meta e 0606
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is encoded by: eco:b2020
constant: true
initial amount: NaN
has only substance units: false
initial concentration: 0.001
boundary condition: true
is: SBO:0000252
name: hisD
type: Species
is: P06988

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is: SBO:0000324
value: 0.00130510466767094
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0859
type: SpeciesReference

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stoichiometry: 1.0
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is: SBO:0000322
value: 0.1
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stoichiometry: 1.0
species: meta s 1212
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stoichiometry: 1.0
species: meta s 1595
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meta s 0545
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initial amount: NaN
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is: SBO:0000247
is: CHEBI:16526
boundary condition: true
notes: iJO1366:M_co2_e
constant: true
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is: C00011

http://identifiers.org/biomodels.db/BIOMD0000000470#_7d97f97e_e848_4b36_a9bb_81447b8dc4c8
stoichiometry: 1.0
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meta s 1255
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constant: false
type: Species
boundary condition: false
is: SBO:0000247
name: Mn2+
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notes: iJO1366:M_mn2_c
initial concentration: 0.1
initial amount: NaN
is: CHEBI:18291

meta e 0607
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has only substance units: false
initial concentration: 0.001
boundary condition: true
is: SBO:0000252
type: Species
constant: true
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is encoded by: eco:b2021

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stoichiometry: 1.0
species: meta s 1334
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is: SBO:0000323
value: 0.1
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stoichiometry: 1.0
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is: SBO:0000322
value: 0.1
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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1672
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is: SBO:0000281
value: 0.2
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stoichiometry: 1.0
species: meta s 0470
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is: SBO:0000323
value: 0.1
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stoichiometry: 1.0
species: meta s 0262
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units: dimensionless
value: 0.0230335321771807
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is: SBO:0000323
value: 0.1
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is: SBO:0000322
value: 0.1
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meta e 0822
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constant: true
initial concentration: 0.001

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stoichiometry: 1.0
species: meta s 0337
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meta e 0821
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is: SBO:0000252
has only substance units: false
name: grcA
initial concentration: 0.001
boundary condition: true
constant: true
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is: SBO:0000322
value: 0.1
type: LocalParameter

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value: 0.1
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meta e 0273
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boundary condition: true
initial concentration: 0.001
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initial amount: NaN
type: Species
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constant: true
is: P52697
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is: SBO:0000323
value: 0.1
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is: SBO:0000323
value: 0.1
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units: dimensionless
value: 0.0613899240064973
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stoichiometry: 1.0
species: meta s 0863
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meta s 1257
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notes: iJO1366:M_mn2_e
is: CHEBI:18291
is: C00034
name: Mn2+
type: Species
initial amount: NaN
boundary condition: true
initial concentration: 1.0
has only substance units: false
constant: true
is: SBO:0000247

http://identifiers.org/biomodels.db/BIOMD0000000470#_5de5d8d2_329e_42d2_a215_ca32fef011a8
units: dimensionless
value: 3.23E-4
type: LocalParameter

meta e 0823
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constant: true
type: Species
initial amount: NaN
is encoded by: eco:b2585
has only substance units: false
initial concentration: 0.001
boundary condition: true
is: SBO:0000252
in compartment: meta cell

http://identifiers.org/biomodels.db/BIOMD0000000470#_5f2dc301_3d60_460b_ae34_37de0d4223d7
stoichiometry: 1.0
species: meta s 1754
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is: SBO:0000323
value: 0.1
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units: dimensionless
value: 0.0038479948756196
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stoichiometry: 1.0
species: meta s 0467
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meta e 0274
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type: Species
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constant: true
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is encoded by: eco:b0774
name: bioA
boundary condition: true
initial concentration: 0.001

http://identifiers.org/biomodels.db/BIOMD0000000470#_0db61e29_dc2f_4076_b35b_58ef73e61a11
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_06270bc0_2a29_4da5_a410_573c99c32d6a
stoichiometry: 1.0
species: meta s 1041
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stoichiometry: 1.0
species: meta s 1127
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is: SBO:0000322
value: 0.1
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is: SBO:0000323
value: 0.1
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http://identifiers.org/biomodels.db/BIOMD0000000470#_5e46cd80_8778_473f_9212_9a1382670833
stoichiometry: 1.0
species: meta s 1095
type: SpeciesReference

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units: dimensionless
value: 0.0492981056959303
type: LocalParameter

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is: SBO:0000322
value: 0.1
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http://identifiers.org/biomodels.db/BIOMD0000000470#_365848d8_b214_47ef_992d_7c4ea62d59ca
stoichiometry: 1.0
species: meta s 1302
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is: SBO:0000324
value: 2.77033467884759E-6
type: LocalParameter

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units: dimensionless
value: 0.0634230033724642
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_1c8e4c10_4113_4530_9747_b492504c18ac
stoichiometry: 1.0
species: meta s 0555
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meta e 0275
initial amount: NaN
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name: bioB
in compartment: meta cell
is encoded by: eco:b0775
is: P12996
type: Species
constant: true
boundary condition: true
is: SBO:0000252
initial concentration: 0.001

http://identifiers.org/biomodels.db/BIOMD0000000470#d3b610fd_2d3e_4977_93ab_193da4f36986
is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#eddbe20b_4324_4339_be5c_39409e57bf13
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#f4cb1547_1acd_4931_ba81_9a892374d677
is: SBO:0000324
value: 0.89369639431221
type: LocalParameter

meta s 0548
has only substance units: false
is: C00175
is: SBO:0000247
notes: iJO1366:M_cobalt2_e
initial concentration: 1.0
name: Co2+
boundary condition: true
in compartment: meta extracellular
initial amount: NaN
constant: true
type: Species
is: CHEBI:27638

http://identifiers.org/biomodels.db/BIOMD0000000470#_8cf9e2b8_9262_47f5_903c_53b93acd0f6d
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_668f2aba_9f9b_4052_9b71_afa28c650aa0
stoichiometry: 1.0
species: meta s 0860
type: SpeciesReference

meta e 0276
has only substance units: false
constant: true
in compartment: meta cell
name: bioF
type: Species
boundary condition: true
is: SBO:0000252
is: P12998
initial concentration: 0.001
initial amount: NaN
is encoded by: eco:b0776

meta s 1777
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has only substance units: false
name: Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
constant: false
is: SBO:0000247
boundary condition: false
initial amount: NaN
initial concentration: 0.1
notes: iJO1366:M_uagmda_c
type: Species

meta e 0052
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type: Species
is encoded by: eco:b0115
initial concentration: 0.001
constant: true
boundary condition: true
initial amount: NaN
is: SBO:0000252
is: P06959
in compartment: meta cell

http://identifiers.org/biomodels.db/BIOMD0000000470#b8403990_47c7_4329_ab47_c79dfa936b37
is: SBO:0000281
value: 0.2
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e7e55900_d4b9_4f21_8fe4_05040fb7445d
stoichiometry: 1.0
species: meta s 0467
type: SpeciesReference

meta r 0676
fast: false
type: Reaction
is: http://identifiers.org/ec-code/5.1.1.3
name: glutamate racemase
reversible: true
is: SBO:0000176

meta e 0827
constant: true
initial concentration: 0.001
name: aroF
in compartment: meta cell
initial amount: NaN
has only substance units: false
is: P00888
is encoded by: eco:b2601
boundary condition: true
type: Species
is: SBO:0000252

http://identifiers.org/biomodels.db/BIOMD0000000470#a5761413_f5d6_40fb_a982_96df51d0cc18
stoichiometry: 1.0
species: meta s 0555
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_4f1dedfe_57d3_447c_badf_84932e9963fe
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta s 0979
is version of: C05272
constant: false
is version of: CHEBI:61526
name: Hexadecenoyl-CoA (n-C16:1CoA)
is: SBO:0000247
initial concentration: 0.1
initial amount: NaN
type: Species
notes: iJO1366:M_hdcoa_c
boundary condition: false
has only substance units: false
in compartment: meta cell

http://identifiers.org/biomodels.db/BIOMD0000000470#_3fcb3436_1c18_44dd_9852_d4aced440c84
is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 0051
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is encoded by: eco:b0114
is: SBO:0000252
constant: true
in compartment: meta cell
has only substance units: false
initial concentration: 0.001
type: Species
is: P0AFG8
name: aceE
boundary condition: true

meta r 0675
is: http://identifiers.org/ec-code/1.4.1.4
type: Reaction
is: SBO:0000176
reversible: true
fast: false
name: glutamate dehydrogenase (NADP)

meta s 1776
is: C05898
type: Species
in compartment: meta cell
has only substance units: false
initial amount: NaN
notes: iJO1366:M_uaagmda_c
boundary condition: false
name: Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-ala-D-glu-meso-2,6-diaminopimeloyl-D-ala-D-ala
is: CHEBI:61388
constant: false
initial concentration: 0.1
is: SBO:0000247

http://identifiers.org/biomodels.db/BIOMD0000000470#_0e7343b3_4c99_4c5e_9481_a7d83db56020
is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 0522
type: Reaction
is: http://identifiers.org/ec-code/2.5.1.1
is: SBO:0000176
name: dimethylallyltranstransferase
reversible: true
fast: false

http://identifiers.org/biomodels.db/BIOMD0000000470#b0e9708c_10f8_4f73_a115_bca8550ca273
units: dimensionless
value: 9.32217621027432E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_85b6508d_20d4_468c_bfd0_6a5e616e44c9
stoichiometry: 1.0
species: meta s 0421
type: SpeciesReference

meta e 0826
is: P07023
name: tyrA
type: Species
is: SBO:0000252
initial concentration: 0.001
is encoded by: eco:b2600
in compartment: meta cell
initial amount: NaN
has only substance units: false
constant: true
boundary condition: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_1dbd6a71_f52f_421e_a150_1675cbcd12b5
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_42e34157_b11e_4e36_b830_3d2eb36b504a
stoichiometry: 1.0
species: meta s 0539
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 3.23318932056296
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#fbca29ba_d33c_4c45_83fe_6ef4c8dc87cd
units: dimensionless
value: 7.97856388811725E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_8243b7d7_ddf6_49d4_9def_8b8736a50ffe
is: SBO:0000322
value: 0.1
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http://identifiers.org/biomodels.db/BIOMD0000000470#_4ff8284a_4cb9_4f8b_afd2_cec7a99c7574
stoichiometry: 1.0
species: meta s 0233
type: SpeciesReference

meta s 0976
is: C08362
is: CHEBI:32372
constant: false
is: SBO:0000247
has only substance units: false
type: Species
in compartment: meta cell
notes: iJO1366:M_hdcea_c
name: Hexadecenoate (n-C16:1)
initial amount: NaN
initial concentration: 0.1
boundary condition: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_25f59fd4_3eb0_423a_a765_c0ed934545f3
stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

meta r 0260
type: Reaction
is: SBO:0000176
is: http://identifiers.org/ec-code/6.2.1.20
fast: false
name: acyl-[acyl-carrier-protein] synthetase (n-C16:1)
reversible: true

http://identifiers.org/biomodels.db/BIOMD0000000470#cdb2b64e_9672_4b61_8eac_9e7831ecebd7
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta e 0054
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name: acnB
type: Species
initial concentration: 0.001
has only substance units: false
is encoded by: eco:b0118
constant: true
initial amount: NaN
is: SBO:0000252
boundary condition: true
is: P36683

http://identifiers.org/biomodels.db/BIOMD0000000470#_7c1e8638_23e5_4bed_84f3_b52a5aeb08df
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_28b9f3a7_057a_42bf_bccc_3357a562d8af
stoichiometry: 1.0
species: meta s 0984
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_9673c8dc_9cb5_4068_87d1_aa17dc601f8f
is: SBO:0000324
value: 0.536257424667499
type: LocalParameter

meta r 0678
is: http://identifiers.org/ec-code/5.4.3.8
type: Reaction
name: glutamate-1-semialdehyde aminotransferase
reversible: true
is: SBO:0000176
fast: false

meta e 0825
is: P0A9J8
is encoded by: eco:b2599
name: pheA
type: Species
initial concentration: 0.001
is: SBO:0000252
initial amount: NaN
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constant: true
has only substance units: false
boundary condition: true

http://identifiers.org/biomodels.db/BIOMD0000000470#a40e3d58_22d9_4553_9ddc_5393f0928600
is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 0863
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constant: false
boundary condition: false
is: SBO:0000247
initial concentration: 0.1
is: C00061
has only substance units: false
name: FMN
is: CHEBI:17621
type: Species
notes: iJO1366:M_fmn_c

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.00129734773236329
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0913
type: SpeciesReference

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is: SBO:0000281
value: 0.2
type: LocalParameter

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units: dimensionless
value: 0.362277497683991
type: LocalParameter

meta e 0053
boundary condition: true
name: lpdA
constant: true
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type: Species
initial concentration: 0.001
has only substance units: false
is: P0A9P0
initial amount: NaN
is encoded by: eco:b0116
is: SBO:0000252

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units: dimensionless
value: 4.63338474645892E-5
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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value: 0.1
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value: 0.0539107129442444
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value: 0.0176802759511862
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value: 200.0
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value: 0.0414265806134066
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constant: false
is: C02745

meta s 0293
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meta s 1261
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constant: true
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value: 7.97856388897518E-5
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value: 0.1
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meta s 1476
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boundary condition: false
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constant: false
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initial concentration: 0.1
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type: Species
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stoichiometry: 1.0
species: meta s 1095
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species: meta s 0391
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initial amount: NaN
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notes: iJO1366:M_co2_c

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value: 0.1
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value: 0.0539107129442425
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units: dimensionless
value: 6.17784634458656E-5
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is: SBO:0000324
value: 0.0787384523792844
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initial amount: NaN
is: CHEBI:62615
notes: iJO1366:M_3oddcoa_c
boundary condition: false
type: Species
constant: false
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value: 0.1
type: LocalParameter

meta s 1477
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initial concentration: 0.1
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notes: iJO1366:M_ps160_c
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is version of: CHEBI:57262
constant: false

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is: SBO:0000322
value: 0.1
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value: 0.1
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meta s 1263
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boundary condition: true
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has only substance units: false
is: SBO:0000247
constant: true
type: Species
is: C06232
initial concentration: 1.0
is: CHEBI:36264
name: Molybdate

meta r 0673
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type: Reaction
is: SBO:0000176
name: glutamate 5-kinase
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fast: false

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is: SBO:0000324
value: 0.00784586485762579
type: LocalParameter

meta s 0860
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notes: iJO1366:M_fadh2_c
is: C01352
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is: CHEBI:58307
name: Flavin adenine dinucleotide reduced
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initial amount: NaN
initial concentration: 0.1
has only substance units: false
is: SBO:0000247
constant: false

meta s 1068
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is: SBO:0000247
name: L-Asparagine
initial amount: NaN
type: Species
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constant: false
is: C00152
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is: CHEBI:17196
notes: iJO1366:M_asn_DASH_L_c
boundary condition: false

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is: SBO:0000281
units: dimensionless
value: 2.0
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value: 0.1
type: LocalParameter

meta e 0828
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is: SBO:0000252
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initial concentration: 0.001
constant: true
initial amount: NaN
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is encoded by: eco:b2615
type: Species
name: ppnK
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meta s 1264
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is: SBO:0000247
initial concentration: 0.1
in compartment: meta cell
constant: false
notes: iJO1366:M_moco_c
type: Species
boundary condition: false
name: molybdenum cofactor
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initial amount: NaN

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stoichiometry: 1.0
species: meta s 0929
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value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0421
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stoichiometry: 1.0
species: meta s 1742
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stoichiometry: 1.0
species: meta s 1333
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stoichiometry: 1.0
species: meta s 0451
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value: 0.2
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is: SBO:0000323
value: 0.1
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meta r 0269
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name: acyl-CoA dehydrogenase (hexadecanoyl-CoA)
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reversible: true
type: Reaction
is: http://identifiers.org/ec-code/1.3.99.3

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value: 20.0
type: LocalParameter

meta s 0971
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initial concentration: 0.1
is: CHEBI:7896
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is: C00249
initial amount: NaN
notes: iJO1366:M_hdca_c
constant: false
in compartment: meta cell
boundary condition: false
name: Hexadecanoate (n-C16:0)
type: Species

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is: SBO:0000322
value: 0.1
type: LocalParameter

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units: dimensionless
value: 0.033396384611683
type: LocalParameter

meta r 1622
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reversible: true
type: Reaction
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name: D-glucose transport via PEP:Pyr PTS (periplasm)

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stoichiometry: 1.0
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stoichiometry: 1.0
species: meta s 0454
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species: meta s 2072
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stoichiometry: 1.0
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stoichiometry: 1.0
species: meta s 0359
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units: dimensionless
value: 2.77033467753811E-7
type: LocalParameter

meta r 0268
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type: Reaction
is: SBO:0000176

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value: 0.229824610571785
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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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type: Reaction
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fast: false
is: SBO:0000176
name: 3,4-Dihydroxy-2-butanone-4-phosphate synthase

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 0267
type: Reaction
is: SBO:0000176
is: http://identifiers.org/ec-code/1.3.99.3
reversible: true
name: acyl-CoA dehydrogenase (decanoyl-CoA)
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stoichiometry: 1.0
species: meta s 1762
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value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.739148841448318
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is: SBO:0000322
value: 0.1
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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta s 1061
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name: L-Arginine
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in compartment: meta cell
is: SBO:0000247
constant: false
type: Species
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is: CHEBI:32682
initial concentration: 0.1
boundary condition: false

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is: SBO:0000324
value: 4.32449244121108E-4
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

meta r 0266
reversible: true
is: http://identifiers.org/ec-code/1.3.99.2
fast: false
type: Reaction
is: SBO:0000176
name: acyl-CoA dehydrogenase (butanoyl-CoA)

meta s 1668
constant: false
initial amount: NaN
in compartment: meta cell
has only substance units: false
boundary condition: false
notes: iJO1366:M_dc2coa_c
is: CHEBI:61406
is: SBO:0000247
is: C05275
initial concentration: 0.1
name: trans-Dec-2-enoyl-CoA
type: Species

meta e 1160
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has only substance units: false
type: Species
constant: true
is: SBO:0000252
name: asnA
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initial concentration: 0.001
is: P00963
initial amount: NaN

meta r 0101
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type: Reaction
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is: SBO:0000176
fast: false

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 1344
fast: false
is: SBO:0000176
is: http://identifiers.org/ec-code/2.5.1.3
name: thiamine-phosphate diphosphorylase
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type: Reaction

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is: SBO:0000324
value: 0.690173479743201
type: LocalParameter

meta r 0679
reversible: true
fast: false
name: glutamate-5-semialdehyde dehydrogenase
is: SBO:0000176
is: http://identifiers.org/ec-code/1.2.1.41
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000470#a4f2a5c9_06bd_4674_b1ba_3da7ba30c309
stoichiometry: 1.0
species: meta s 1742
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#b2866a56_bc11_4f3e_ad02_dfbdd2371b9d
stoichiometry: 1.0
species: meta s 1095
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#ae3fc364_53ca_4c41_9105_314b6fdf397e
stoichiometry: 1.0
species: meta s 0790
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_74c703da_0511_4e77_b303_73015148fb06
stoichiometry: 1.0
species: meta s 1334
type: SpeciesReference

meta e 0919
type: Species
initial concentration: 0.001
is encoded by: eco:b2914
constant: true
is: P0A7Z0
is: SBO:0000252
in compartment: meta cell
initial amount: NaN
has only substance units: false
boundary condition: true
name: rpiA

http://identifiers.org/biomodels.db/BIOMD0000000470#_0fd86f8f_6d94_4756_8a7f_be8ddc1e7688
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 0100
is: http://identifiers.org/ec-code/4.1.2.16
reversible: true
type: Reaction
fast: false
is: SBO:0000176
name: 3-deoxy -D-manno-octulosonic -acid 8-phosphate synthase

http://identifiers.org/biomodels.db/BIOMD0000000470#_2991157f_3c54_49b1_ac0f_086188307684
is: SBO:0000324
value: 0.00240936007438903
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_301f4499_c7db_4a5f_8258_bba3e58b551f
is: SBO:0000324
value: 0.690173479743024
type: LocalParameter

meta r 1345
name: thiamine-phosphate kinase
type: Reaction
reversible: true
is: http://identifiers.org/ec-code/2.7.4.16
is: SBO:0000176
fast: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_60f08a48_d171_4c9d_b007_684d4815190e
stoichiometry: 1.0
species: meta s 1745
type: SpeciesReference

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_4438283c_1cc1_4893_9023_5431c2c0ae10
stoichiometry: 1.0
species: meta s 0913
type: SpeciesReference

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is: SBO:0000324
value: 3.87846855038663E-6
type: LocalParameter

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is: SBO:0000247
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: meta extracellular
name: (2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
type: Species

http://identifiers.org/biomodels.db/BIOMD0000000470#a60442d5_235d_44e0_994d_d642dbfe553b
stoichiometry: 2.0
species: meta s 0862
type: SpeciesReference

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 17.3323096331047
type: LocalParameter

meta e 0918
in compartment: meta cell
initial amount: NaN
boundary condition: true
constant: true
is: P0A9T0
type: Species
name: serA
initial concentration: 0.001
is encoded by: eco:b2913
has only substance units: false
is: SBO:0000252

http://identifiers.org/biomodels.db/BIOMD0000000470#b49092cd_30e1_4b5e_a8cb_a27749d35f96
units: dimensionless
value: 3.08892317225085E-5
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 1346
fast: false
name: thiazole phosphate synthesis
is: SBO:0000176
type: Reaction
reversible: true

meta s 0867
name: Formate
initial amount: NaN
notes: iJO1366:M_for_c
is: SBO:0000247
is: CHEBI:15740
has only substance units: false
type: Species
in compartment: meta cell
boundary condition: false
constant: false
is: C00058
initial concentration: 0.1

http://identifiers.org/biomodels.db/BIOMD0000000470#_8d28a1bf_99d4_4936_a33f_f70984fbef38
stoichiometry: 1.0
species: meta s 1095
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0097
type: SpeciesReference

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_61153803_1ab1_4781_b977_8838500717c4
stoichiometry: 1.0
species: meta s 0768
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_827a3337_71b0_4d49_a622_899116af016f
stoichiometry: 1.0
species: meta s 0229
type: SpeciesReference

meta r 1347
name: thioredoxin reductase (NADPH)
fast: false
is: SBO:0000176
reversible: true
type: Reaction
is: http://identifiers.org/ec-code/1.8.1.9

http://identifiers.org/biomodels.db/BIOMD0000000470#cd31e4da_55ad_4afd_9eb7_06c67180b683
is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ecb3a178_c9ae_4cba_b325_ce84f2af878a
is: SBO:0000281
value: 0.2
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_13222080_3723_4b03_8350_4978bc14c4f6
stoichiometry: 0.06382
species: meta s 1437
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_7ad720d1_b24f_46eb_8ccd_87c9ac00f7b3
stoichiometry: 1.0
species: meta s 0732
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 1484
type: SpeciesReference

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_350079f2_d6d1_4d01_9b7f_eb4e6cc54312
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ad854f77_c918_4db0_b042_f9b27699afff
is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1335
type: SpeciesReference

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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#f09defca_22c4_40fb_bd63_b9774d8404d6
stoichiometry: 1.0
species: meta s 1095
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_39d703f4_981d_4beb_bea6_97771d3b5fc5
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_33bd70da_e7ca_45ce_8679_7387503332d2
stoichiometry: 1.0
species: meta s 0467
type: SpeciesReference

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is: SBO:0000324
value: 0.150957753181509
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ec9e73d5_3126_4d32_992a_b16c6523e869
stoichiometry: 2.0
species: meta s 0861
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_73f7fe67_5250_4264_8bd3_389fb28e3bab
stoichiometry: 1.0
species: meta s 1138
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#dbfea01d_e95e_43b4_a3d0_d0609ace2322
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_728d9af9_2622_40db_a6e3_81058d92157c
stoichiometry: 1.0
species: meta s 0936
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_18944278_961e_4d7f_9e20_140bdc7aa382
stoichiometry: 1.0
species: meta s 0543
type: SpeciesReference

meta e 1029
constant: true
boundary condition: true
is: SBO:0000252
type: Species
in compartment: meta cell
has only substance units: false
is encoded by: eco:b3396
initial amount: NaN
initial concentration: 0.001
is: P02918
name: mrcA

http://identifiers.org/biomodels.db/BIOMD0000000470#_288ee8fc_e67d_4685_93f1_342a81e01968
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e4a99873_4503_409f_bc5e_00e4b9da1450
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#a3a7081a_a5a7_4bdd_b876_524f096f8057
stoichiometry: 1.0
species: meta s 1493
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_324a3d8f_88d3_4a56_9c6a_d88c1624cca1
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_84489a71_d2a9_40a7_8abe_5d89cab86e34
is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 1028
initial concentration: 0.001
is: P0A6D7
initial amount: NaN
constant: true
name: aroK
boundary condition: true
is encoded by: eco:b3390
has only substance units: false
in compartment: meta cell
type: Species
is: SBO:0000252

http://identifiers.org/biomodels.db/BIOMD0000000470#_05a88d6e_d26b_48d6_95ce_ff80a194073c
stoichiometry: 1.0
species: meta s 0860
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#c6f696e1_8171_4d9c_bc18_a9dc23e08895
is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 1374
has only substance units: false
name: O2
notes: iJO1366:M_o2_e
in compartment: meta extracellular
type: Species
initial amount: NaN
is: C00007
initial concentration: 1.0
constant: true
boundary condition: true
is: SBO:0000247
is: CHEBI:15379

http://identifiers.org/biomodels.db/BIOMD0000000470#df37a09b_e4be_4509_8d83_e9f21418763b
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_33426586_f6a3_4356_b81c_1aac8080b8e8
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#dd4272f1_9406_401f_b160_634775725123
stoichiometry: 1.0
species: meta s 0018
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#bb8092aa_6373_4b92_a23c_1485965e780f
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ff3b2403_278e_4e22_87dd_023a65dcef6c
stoichiometry: 1.0
species: meta s 0128
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#afcfeb1d_31a4_4c95_83b4_b5a4972d4f08
stoichiometry: 1.0
species: meta s 1006
type: SpeciesReference

meta e 1027
constant: true
has only substance units: false
in compartment: meta cell
type: Species
is: SBO:0000252
is: P07639
initial concentration: 0.001
is encoded by: eco:b3389
initial amount: NaN
name: aroB
boundary condition: true

meta e 0391
boundary condition: true
is: SBO:0000252
initial amount: NaN
initial concentration: 0.001
type: Species
is encoded by: eco:b1136
has only substance units: false
constant: true
name: icd
is: P08200
in compartment: meta cell

http://identifiers.org/biomodels.db/BIOMD0000000470#_0346dd11_baf6_4867_a7cc_9178a335fadf
stoichiometry: 1.0
species: meta s 0783
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#ff2bc6e4_cbb8_4e17_b476_72adb8afdb6f
units: dimensionless
value: 9.26676951688061E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ad785fb6_1e3d_49ec_ab9b_82e5dcccb859
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_51cf2077_4137_4375_b142_938471c6d22f
stoichiometry: 1.0
species: meta s 0121
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_70c280fd_e47a_457a_885c_113567c65466
stoichiometry: 1.0
species: meta s 0042
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_6d3bf501_b8b7_4596_89e9_60b8ea4a3be1
units: dimensionless
value: 0.2151
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_73f13aac_f4bb_41a5_9815_f9b89b33cd6c
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_9c2be11e_d73d_400b_9c0e_2788fbf9d4e0
name: mM fourth
type: SBMLUnitsDef

http://identifiers.org/biomodels.db/BIOMD0000000470#_699212d8_a0da_42a0_9b16_317772cf4429
stoichiometry: 2.0
species: meta s 1551
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#c834355c_4cde_458a_94e2_ac17a9ddfb1a
is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 1338
fast: false
reversible: true
is: SBO:0000176
type: Reaction
is: http://identifiers.org/ec-code/2.3.1.117
name: tetrahydrodipicolinate succinylase

http://identifiers.org/biomodels.db/BIOMD0000000470#_49c5bc80_c290_4ea7_ad07_9bb6a1bbeea9
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_0237db37_e5dc_4026_8545_a14e725e5670
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_33c61781_cc4c_4cc7_9cc3_82c3a34e79cb
stoichiometry: 0.4232
species: meta s 1193
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_785f4aa2_c20a_4512_8c0e_c5a571879dc0
is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 0806
name: isocitrate dehydrogenase (NADP)
fast: false
is: http://identifiers.org/ec-code/1.1.1.42
is: SBO:0000176
reversible: true
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000470#_0b64bbcf_6ca6_4971_8fd7_722cfa934e8d
units: dimensionless
value: 5.76E-4
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_1898ddee_ee5c_47e5_bff0_4ae21c1e4e48
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ed4a8ff5_04ab_470b_9ca5_87336b46e6a5
stoichiometry: 1.0
species: meta s 1672
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_73516f1b_52cf_4819_b689_7b2503afc03c
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 0963
fast: false
type: Reaction
reversible: true
name: MoaD sulfuration (nadh, assumed)
is: SBO:0000176

http://identifiers.org/biomodels.db/BIOMD0000000470#caa6d43b_5ab9_4cb8_a9b0_f872a7e6c76e
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#c8cdec34_70c0_4851_a482_b71d7cb19989
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 1337
reversible: true
is: SBO:0000176
type: Reaction
is: http://identifiers.org/ec-code/2.7.1.130
fast: false
name: Tetraacyldisaccharide 4'kinase

http://identifiers.org/biomodels.db/BIOMD0000000470#a06cb116_6c15_4c10_8987_6f2469b474c5
value: 0.1
type: LocalParameter

meta r 0964
type: Reaction
reversible: true
name: molybdenum cofactor synthase
fast: false
is: SBO:0000176

http://identifiers.org/biomodels.db/BIOMD0000000470#_067b8a5f_58fb_431c_96ef_93b2d0d9b4cd
units: dimensionless
value: 0.00884013797559549
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#a1466089_9395_4d08_8f79_a74cb5d60296
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#acd6a500_a0f4_4949_8222_147e1af886dd
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#aa5c0d05_ce54_46eb_84c5_a8f5c90e284d
type: Reaction
reversible: true
is: SBO:0000185
name: calcium (Ca+2) transport via diffusion (extracellular to periplasm)
fast: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_0cbe4f90_dbd5_430f_b402_d85fa49e693e
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_875c1009_9c00_4585_81fd_4f9968f82b87
stoichiometry: 1.0
species: meta s 0860
type: SpeciesReference

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 0395
boundary condition: true
is: P29012
is: SBO:0000252
type: Species
has only substance units: false
name: dadX
is encoded by: eco:b1190
constant: true
in compartment: meta cell
initial amount: NaN
initial concentration: 0.001

meta r 0808
fast: false
is: SBO:0000176
type: Reaction
name: isoleucine transaminase
reversible: true
is: http://identifiers.org/ec-code/2.6.1.42

http://identifiers.org/biomodels.db/BIOMD0000000470#e2d4282b_8728_4c20_b8c2_bed344956842
is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 0405
in compartment: meta cell
initial amount: NaN
type: Species
boundary condition: false
is: CHEBI:16708
has only substance units: false
notes: iJO1366:M_ade_c
constant: false
is: C00147
is: SBO:0000247
initial concentration: 0.1
name: Adenine

http://identifiers.org/biomodels.db/BIOMD0000000470#ae53b52b_1701_42c5_a144_a32b28e7eb4d
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 0965
name: molybdopterin adenylyltransferase
type: Reaction
fast: false
reversible: true
is: SBO:0000176

http://identifiers.org/biomodels.db/BIOMD0000000470#_3248f250_566f_4756_9b09_c706224aff69
is: SBO:0000281
value: 0.2
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_004f9c13_657d_44ca_871e_442d853ef783
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_4fafc839_8eb3_4b86_866d_ad36ac1d995d
is: SBO:0000324
value: 6.20554969142397E-4
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#fdacdf82_e485_4948_b5c3_943bb2b8cdb7
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_97912ad1_ebaf_4039_bbb0_ca0d86f43cc9
units: dimensionless
value: 0.00787329117099211
type: LocalParameter

meta r 0801
reversible: true
name: ISC [4Fe-4S] Transfer
fast: false
is: SBO:0000176
type: Reaction

meta e 1315
is: P0A7D4
is: SBO:0000252
boundary condition: true
initial amount: NaN
type: Species
in compartment: meta cell
initial concentration: 0.001
has only substance units: false
name: purA
constant: true
is encoded by: eco:b4177

meta e 0061
type: Species
has only substance units: false
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initial amount: NaN
initial concentration: 0.001
boundary condition: true
constant: true
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is: P0A790
in compartment: meta cell

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is: SBO:0000322
value: 0.1
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meta s 0408
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name: Adenosine
boundary condition: false
initial amount: NaN
is: SBO:0000247
in compartment: meta cell
type: Species
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is: C00212

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stoichiometry: 1.0
species: meta s 0318
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is: SBO:0000323
value: 0.1
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stoichiometry: 1.0
species: meta s 1806
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meta s 1494
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name: potassium
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boundary condition: false
is: CHEBI:29103

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is: SBO:0000323
value: 0.1
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constant: false
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boundary condition: false
initial concentration: 0.1
has only substance units: false
is: CHEBI:128769
notes: iJO1366:M_ipdp_c
in compartment: meta cell
name: Isopentenyl diphosphate

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value: 0.1
type: LocalParameter

meta r 0802
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is: SBO:0000176
type: Reaction
fast: false
reversible: true

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units: dimensionless
value: 0.0104178435779464
type: LocalParameter

meta e 0062
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is: P31663
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type: Species
initial concentration: 0.001
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initial amount: NaN
constant: true

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units: dimensionless
value: 0.0414265806134066
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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value: 0.1
type: LocalParameter

meta s 1493
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constant: false
boundary condition: false
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is: CHEBI:58126
notes: iJO1366:M_ppbng_c
type: Species
name: Porphobilinogen
initial amount: NaN
is: SBO:0000247
is: C00931

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stoichiometry: 1.0
species: meta s 1248
type: SpeciesReference

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boundary condition: false
is: SBO:0000247
type: Species
constant: false
initial amount: NaN
is: C00311
is: CHEBI:16087
initial concentration: 0.1
has only substance units: false

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units: dimensionless
value: 2.6E-4
type: LocalParameter

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units: dimensionless
value: 0.131013836759781
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value: 0.0589070115461784
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stoichiometry: 1.0
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value: 0.820683946692049
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stoichiometry: 1.0
species: meta s 1095
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stoichiometry: 1.0
species: meta s 0446
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stoichiometry: 1.0
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value: 0.1
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stoichiometry: 1.0
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units: dimensionless
value: 3.08892317222495E-5
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stoichiometry: 1.0
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constant: false
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name: D-Ribulose 5-phosphate
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boundary condition: false
initial concentration: 0.1
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is: SBO:0000322
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units: dimensionless
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stoichiometry: 1.0
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is: SBO:0000323
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stoichiometry: 5.0
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units: dimensionless
value: 0.320567754236931
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stoichiometry: 1.0
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stoichiometry: 1.0
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meta e 1026
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is: P0AG07
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is: SBO:0000322
value: 0.1
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units: dimensionless
value: 3.08892317225085E-5
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value: 0.1
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value: 0.1
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stoichiometry: 1.0
species: meta s 1750
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stoichiometry: 1.0
species: meta s 1033
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stoichiometry: 1.0
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stoichiometry: 1.0
species: meta s 0555
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is: SBO:0000323
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stoichiometry: 1.0
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stoichiometry: 0.2958
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meta e 0281
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boundary condition: true
constant: true
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name: moaD
is: P30748
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is: SBO:0000281
value: 0.2
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is: SBO:0000322
value: 0.1
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stoichiometry: 1.0
species: meta s 1095
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units: dimensionless
value: 2.77033467884759E-7
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value: 0.1
type: LocalParameter

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is: SBO:0000247
notes: iJO1366:M_murein5px4p_p
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constant: false
initial concentration: 0.1
in compartment: meta cell
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type: Species
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initial amount: NaN

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is: SBO:0000324
value: 0.00240326533808495
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is: SBO:0000324
value: 3.71778914548703E-4
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is: SBO:0000323
value: 0.1
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meta e 0282
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type: Species
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is: SBO:0000252
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initial amount: NaN
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meta e 1023
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is: SBO:0000252
has only substance units: false
name: yhfW
initial amount: NaN
is: P45549
type: Species
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constant: true
boundary condition: true

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stoichiometry: 1.0
species: meta s 0313
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stoichiometry: 1.0
species: meta s 0372
type: SpeciesReference

meta r 0800
reversible: true
name: ISC [4Fe-4S] Reduction
fast: false
is: SBO:0000176
type: Reaction

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is: SBO:0000323
value: 0.1
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stoichiometry: 1.0
species: meta s 0621
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stoichiometry: 1.0
species: meta s 1430
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meta s 1265
type: Species
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notes: iJO1366:M_mpt_c
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is: SBO:0000247
name: molybdopterin
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initial concentration: 0.1
constant: false
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boundary condition: false
is: CHEBI:44074

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is: SBO:0000323
value: 0.1
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stoichiometry: 1.0
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is: SBO:0000281
value: 0.2
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meta s 0283
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name: 3-Octaprenyl-4-hydroxybenzoate
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notes: iJO1366:M_3ophb_c
type: Species
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is: C05809
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is: SBO:0000247
initial amount: NaN
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is: CHEBI:1617

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meta e 0280
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type: Species
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initial concentration: 0.001
name: moaC

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is: SBO:0000323
value: 0.1
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stoichiometry: 1.0
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stoichiometry: 1.0
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meta r 1222
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stoichiometry: 1.0
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meta r 0388
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fast: false
is: SBO:0000176

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type: LocalParameter

meta s 1033
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is: SBO:0000247
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is: C06025
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name: KDO(2)-lipid IV(A)
initial amount: NaN
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value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_2e487d2d_63ec_4512_90dc_01b4158e3c4c
stoichiometry: 1.0
species: meta s 0337
type: SpeciesReference

meta r 0270
is: http://identifiers.org/ec-code/1.3.99.3
fast: false
is: SBO:0000176
reversible: true
type: Reaction
name: acyl-CoA dehydrogenase (hexanoyl-CoA)

http://identifiers.org/biomodels.db/BIOMD0000000470#_87d48734_985f_405b_a0a2_53511c5fa076
stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

meta r 0660
is: http://identifiers.org/ec-code/1.1.1.49
type: Reaction
fast: false
is: SBO:0000176
name: glucose 6-phosphate dehydrogenase
reversible: true

meta s 1274
type: Species
is: C03406
initial amount: NaN
notes: iJO1366:M_argsuc_c
is: CHEBI:57472
constant: false
has only substance units: false
boundary condition: false
name: N(omega)-(L-Arginino)succinate
in compartment: meta cell
initial concentration: 0.1
is: SBO:0000247

http://identifiers.org/biomodels.db/BIOMD0000000470#_21e2714d_39f9_4495_887a_6477328aadaf
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta s 0555
boundary condition: false
name: Coenzyme A
notes: iJO1366:M_coa_c
initial concentration: 0.1
has only substance units: false
is: CHEBI:57287
initial amount: NaN
is: C00010
type: Species
constant: false
in compartment: meta cell
is: SBO:0000247

http://identifiers.org/biomodels.db/BIOMD0000000470#dec0870b_e8a7_4197_8253_01626e0ff2fb
stoichiometry: 1.0
species: meta s 1731
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_89cc9b3b_0693_4d6e_bdb4_d9c6b3d133bc
is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 0282
is: SBO:0000247
notes: iJO1366:M_3mob_c
is: C00141
initial amount: NaN
constant: false
has only substance units: false
boundary condition: false
in compartment: meta cell
type: Species
is: CHEBI:11851
name: 3-Methyl-2-oxobutanoate
initial concentration: 0.1

http://identifiers.org/biomodels.db/BIOMD0000000470#c320373c_fef4_4bbe_9df1_5f922e6651dd
units: dimensionless
value: 3.08892317225085E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e56106af_49d6_47c6_a70f_5f28c19227d7
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 1220
type: Reaction
reversible: true
fast: false
is: SBO:0000176
name: Pimeloyl-[ACP] methyl ester esterase

http://identifiers.org/biomodels.db/BIOMD0000000470#_3dfb4d79_11ad_4699_a623_4c08e39ee43a
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#b11e08ff_3bd3_4a81_963d_38cec445e4cc
stoichiometry: 1.0
species: meta s 0599
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#ef8126bc_1e68_45e2_905a_e3846667d5cd
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_8f278c8a_277a_4203_b3fa_f38e9ad21919
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ab2101aa_3e90_40cb_a9e8_345bbd4ec10e
is: SBO:0000281
value: 0.2
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_8a5c94bf_6115_4e85_ab93_834d9f4713b6
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_6eb5abff_5c51_43d0_b9cc_9d949c1cac7d
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 0385
type: Reaction
name: bis-molybdopterin guanine dinucleotide synthase
reversible: true
is: SBO:0000176
fast: false

meta r 0272
is: SBO:0000176
name: acyl-CoA dehydrogenase (octanoyl-CoA)
is: http://identifiers.org/ec-code/1.3.99.3
type: Reaction
fast: false
reversible: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_4ca79fb3_9d5f_42fb_8c43_055cea04d378
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 1225
name: prephenate dehydrogenase
fast: false
is: SBO:0000176
reversible: true
type: Reaction
is: http://identifiers.org/ec-code/1.3.1.12

http://identifiers.org/biomodels.db/BIOMD0000000470#_323b0b04_db5c_4497_8a49_18226cdf1f4b
stoichiometry: 1.0
species: meta s 1322
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_60f7cf3d_b697_4985_8960_1b5a45569dd0
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_0a6fb4ed_8f35_4959_ad57_60b506d644d6
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#c7cf9b5a_aa8d_4194_aab0_1a22bcbbd70e
initial amount: NaN
constant: false
initial concentration: 0.1
boundary condition: false
type: Species
has only substance units: false
in compartment: meta cell
name: Pimeloyl-[acyl-carrier protein] methyl ester
is: SBO:0000247
notes: iJO1366:M_pmeACP_c

http://identifiers.org/biomodels.db/BIOMD0000000470#_41a7b178_6706_43d3_8b2d_037685b7fee4
units: dimensionless
value: 0.0104178435779464
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_92cbd36c_a16d_4269_a101_e6b20ef9addb
is: SBO:0000281
value: 0.2
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#f356cc29_dc57_4c9a_9964_e5e893eb3320
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_392ed73e_28fb_45bb_b065_10df48ebc318
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#add3d7ed_66b9_48fb_b7f7_8871d8a39511
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_6f8985de_fcb2_4573_ba9f_60e08ed94873
stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

meta r 0384
reversible: true
is: SBO:0000176
name: bis-molybdenum cofactor synthase
type: Reaction
fast: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_3bb3cd65_63df_4d08_ae7e_1c9f1d4559fa
stoichiometry: 1.0
species: meta s 0360
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_62dbca84_ce5a_4df9_acd6_3c986c5e70fe
is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 0065
initial amount: NaN
is: P02919
is encoded by: eco:b0149
in compartment: meta cell
initial concentration: 0.001
has only substance units: false
type: Species
is: SBO:0000252
boundary condition: true
constant: true
name: mrcB

http://identifiers.org/biomodels.db/BIOMD0000000470#_3fb76fae_96df_472f_a808_e56f7fa152e9
is: SBO:0000323
value: 0.1
type: LocalParameter

meta extracellular
is: GO:0005576
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: extracellular
type: Compartment

http://identifiers.org/biomodels.db/BIOMD0000000470#ce437fc2_0441_41e3_b502_72e492ed63d7
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_77fba7d0_805f_4ca2_a0fe_62551080e145
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_9ed4da2d_050a_4086_90d9_d584403ae045
is: SBO:0000324
value: 0.44707799641828
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#bf93f060_a41a_4e04_83bf_1e75f9bab8a0
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_53c7b380_3482_4f3d_8a00_0205365131d2
units: dimensionless
value: 0.005205
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_7f3ac5b5_7837_491e_ae7a_fd03ee57970c
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#f6ae4405_d347_4752_83cd_936940b42122
is: SBO:0000281
value: 0.2
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#a832748b_0cd9_4b97_8000_a5efec619831
units: dimensionless
value: 3.87846855703637E-6
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_0336dd2c_dd62_4275_a159_334345b39936
units: dimensionless
value: 3.08892317229363E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_3f1d5ef6_ac13_4fb8_a47d_32368d70b5d6
stoichiometry: 2.23E-4
species: meta s 0133
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_6f545402_6898_4f1b_85de_fabedf7781af
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#df59595c_e7de_49c4_a40e_ea6767f90f06
is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 0064
is encoded by: eco:b0142
is: P26281
initial amount: NaN
constant: true
in compartment: meta cell
initial concentration: 0.001
name: folK
has only substance units: false
type: Species
boundary condition: true
is: SBO:0000252

meta r 0664
type: Reaction
is: http://identifiers.org/ec-code/5.3.1.9
reversible: true
is: SBO:0000176
name: glucose-6-phosphate isomerase
fast: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_3c327063_6748_4482_b438_ceb228546ce5
stoichiometry: 1.0
species: meta s 0267
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_8de6accc_6571_42f5_b771_5f148f0fc2c0
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_8e31e0cb_e960_4f9d_aed8_5baf374a1832
units: dimensionless
value: 0.0613899240064973
type: LocalParameter

meta r 1223
fast: false
is: http://identifiers.org/ec-code/4.2.1.24
reversible: true
is: SBO:0000176
name: porphobilinogen synthase
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000470#f4789f19_9b6b_435e_b183_a8f519f23b8b
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_7cbe0406_94f3_4f78_b662_9038535220d8
units: dimensionless
value: 0.0402391112803253
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#d6eef384_a0a0_4b2f_8071_dc7aadea4c19
name: Glycolate oxidase
reversible: true
is: SBO:0000176
fast: false
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000470#_188d4739_8ef1_400a_88b5_e462204d088e
stoichiometry: 1.0
species: meta s 0467
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_365e9fe0_fe35_496a_831f_69569a75eccd
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_5815733b_bfd5_414e_b498_c81ccf8a219a
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND
type: SBMLUnit

http://identifiers.org/biomodels.db/BIOMD0000000470#_126b9c39_305d_4894_bb53_7bfb0fdd47ec
units: dimensionless
value: 12.8512360032879
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_00b26b3e_c670_4919_b406_792b7d70dca8
stoichiometry: 1.0
species: meta s 0269
type: SpeciesReference

meta s 1484
notes: iJO1366:M_pep_c
boundary condition: false
type: Species
in compartment: meta cell
is: CHEBI:58702
has only substance units: false
is: SBO:0000247
name: Phosphoenolpyruvate
initial amount: NaN
initial concentration: 0.1
constant: false
is: C00074

http://identifiers.org/biomodels.db/BIOMD0000000470#_06955806_06bc_47ee_8071_77082cd4b8ca
stoichiometry: 1.0
species: meta s 0543
type: SpeciesReference

meta r 0386
type: Reaction
name: bis-molybdopterin guanine dinucleotide synthase (single GDP)
reversible: true
is: SBO:0000176
fast: false

meta e 0063
initial amount: NaN
name: panB
in compartment: meta cell
initial concentration: 0.001
is: P31057
has only substance units: false
boundary condition: true
is encoded by: eco:b0134
type: Species
is: SBO:0000252
constant: true

meta r 0273
type: Reaction
name: acyl-CoA dehydrogenase (tetradecanoyl-CoA)
reversible: true
is: http://identifiers.org/ec-code/1.3.99.3
fast: false
is: SBO:0000176

http://identifiers.org/biomodels.db/BIOMD0000000470#_7bbb3f92_d7a1_432f_a7c9_c6c79c29a338
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#f8693181_356a_4508_81fe_d08a89d42ee6
stoichiometry: 2.0
species: meta s 0345
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_5da74f2b_fb64_46c5_af97_b6265c79ab65
units: dimensionless
value: 2.23E-4
type: LocalParameter

meta r 1224
type: Reaction
is: http://identifiers.org/ec-code/4.2.1.51
name: prephenate dehydratase
is: SBO:0000176
fast: false
reversible: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_20a24c0c_2ec2_41ea_8bcd_1c51135166ab
is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 0175
name: gcl
in compartment: meta cell
initial concentration: 0.001
is encoded by: eco:b0507
has only substance units: false
type: Species
initial amount: NaN
is: P0AEP7
constant: true
is: SBO:0000252
boundary condition: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_284c74e0_f36f_455b_a875_183c48869963
stoichiometry: 1.0
species: meta s 0627
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#c32f1f7e_428d_49b9_a870_1cf050840547
stoichiometry: 1.0
species: meta s 0445
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_63fbca21_38db_46d0_9b5c_e30db3761329
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_225e4e56_6535_4d25_a108_8381764e3fc6
is: SBO:0000281
value: 0.2
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_6cbd6302_c5d7_41cd_b7ec_16bc03221916
fast: false
name: ribonucleoside-triphosphate reductase (UTP) (flavodoxin)
is: SBO:0000176
type: Reaction
reversible: true

http://identifiers.org/biomodels.db/BIOMD0000000470#d8f4361d_6484_488b_8b33_0b4e2197e851
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 1335
fast: false
is: SBO:0000176
type: Reaction
is: http://identifiers.org/ec-code/1.1.1.60
reversible: true
is described by: http://identifiers.org/isbn/1555810845
name: tartronate semialdehyde reductase

http://identifiers.org/biomodels.db/BIOMD0000000470#_01ddbddd_8488_49fc_ba3f_33216cbec5ab
stoichiometry: 1.0
species: meta s 1333
type: SpeciesReference

meta r 0954
reversible: true
type: Reaction
name: methionine synthase
fast: false
is: SBO:0000176
is: http://identifiers.org/ec-code/2.1.1.13

http://identifiers.org/biomodels.db/BIOMD0000000470#a469edfd_e2e2_4355_baed_03261ce31289
stoichiometry: 1.0
species: meta s 1334
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#a2113fc0_bffc_4e9e_9b5b_0cb21eb00a84
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_3acc4a36_4ed7_4e61_b4f7_65c8fc0259ff
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_5e7e4b1b_2cc8_40ca_981f_58ed45b8454a
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#f79aeb26_3cfc_432d_8cb0_7891a7c12aef
is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 1595
type: Species
initial concentration: 0.1
is: C00042
constant: false
initial amount: NaN
name: Succinate
boundary condition: false
in compartment: meta cell
is: SBO:0000247
has only substance units: false
notes: iJO1366:M_succ_c
is: CHEBI:30031

http://identifiers.org/biomodels.db/BIOMD0000000470#ebf47cea_a5e5_4039_a16c_b2d1e38d0669
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#cdb8e1a7_80af_4ef1_96c9_507d4f26c86d
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#a7b8d022_6f77_4ea3_86b6_d4160c48c9b3
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_2b353a18_9e7e_4b38_91c1_bd551b339857
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 0957
reversible: true
type: Reaction
fast: false
is: SBO:0000176
name: methylenetetrahydrofolate dehydrogenase (NADP)
is: http://identifiers.org/ec-code/1.5.1.5

http://identifiers.org/biomodels.db/BIOMD0000000470#_99b7521c_8d4f_414f_886b_3ff10cc8c7e5
stoichiometry: 1.0
species: meta s 0467
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_8bd45948_49f2_4eb0_a7ad_11b0e26f64ba
is: SBO:0000324
value: 0.379555336350109
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_2989e7d5_54a2_45a1_bb09_53693a17a7b0
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#d061cdb1_e46c_40bf_823c_76ce4989f8a1
is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 1172
initial amount: NaN
constant: true
is: SBO:0000252
has only substance units: false
in compartment: meta cell
is: P0AA25
type: Species
initial concentration: 0.001
boundary condition: true
name: trxA
is encoded by: eco:b3781

meta r 0383
type: Reaction
is: http://identifiers.org/ec-code/2.8.1.6
name: Biotin synthase
reversible: true
is: SBO:0000176
fast: false

http://identifiers.org/biomodels.db/BIOMD0000000470#f5ad4c5f_6f62_4ab2_923b_a9dd1cda83f2
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_356a8609_23d0_4fed_8a65_e0e6661879c4
stoichiometry: 1.0
species: meta s 0046
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#c6bf0731_0add_4c83_a796_6a1b6f43e95b
units: dimensionless
value: 2.23E-4
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#fa58f2db_1b02_402f_b276_d5234ca94ff3
units: dimensionless
value: 0.0306260499280495
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_5dcaa3b4_5cc9_4d0c_9105_b1ded5137d39
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ec43f1f8_0a39_4e77_822d_b4a582b4274b
stoichiometry: 1.0
species: meta s 0397
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_42d08df9_a1ec_4db1_87ee_8f6088063ae2
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_474a2165_a8c6_46e7_befe_65f1c7cc3b01
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#aec18136_86fd_47f6_acb1_66dd51adacce
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_7f40edab_87db_40d5_8dfa_ed99a3f0e3cb
stoichiometry: 1.0
species: meta s 1335
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#c2ea24d6_41fb_46b9_8f3c_6eed7356a59f
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.458199505005801
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is: SBO:0000185
fast: false
reversible: false
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type: Reaction

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stoichiometry: 1.0
species: meta s 0543
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stoichiometry: 1.0
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value: 5.54066935769518E-7
type: LocalParameter

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is: SBO:0000252
constant: true
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is: P05793
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value: 0.719417132663872
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is: SBO:0000322
value: 0.1
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stoichiometry: 1.0
species: meta s 0336
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meta r 1330
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is: http://identifiers.org/ec-code/1.8.2.2
fast: false
is: SBO:0000176
type: Reaction
name: sulfite reductase (NADPH2)

meta s 0859
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is: C00016
constant: false
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type: Species
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is: SBO:0000247
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boundary condition: false
initial amount: NaN
is: CHEBI:16238

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units: dimensionless
value: 1.68990415703956E-5
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stoichiometry: 1.0
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value: 0.1
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value: 0.00172979697648423
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value: 1.0
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value: 0.1
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stoichiometry: 1.0
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constant: false
boundary condition: false
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is: CHEBI:57292
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is: C00091
is: SBO:0000247
initial amount: NaN
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meta e 0177
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type: Species
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is: SBO:0000324
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units: dimensionless
value: 0.00539107129442444
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stoichiometry: 1.0
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stoichiometry: 1.0
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units: dimensionless
value: 0.0107821425888488
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units: dimensionless
value: 9.26676951688061E-5
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meta s 0991
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constant: false
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notes: iJO1366:M_h2o2_c
initial concentration: 0.1
is: CHEBI:16240
boundary condition: false
type: Species
initial amount: NaN
is: SBO:0000247

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is: SBO:0000323
value: 0.1
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meta r 1329
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is: SBO:0000176
type: Reaction
reversible: true
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stoichiometry: 1.0
species: meta s 0859
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value: 0.295788634175657
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value: 0.00111699894445653
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is: SBO:0000324
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stoichiometry: 1.0
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is: SBO:0000323
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meta r 0970
type: Reaction
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is: SBO:0000176
fast: false
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stoichiometry: 1.0
species: meta s 0336
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is: SBO:0000322
value: 0.1
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meta s 0412
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name: Adenosine 5'-phosphosulfate
notes: iJO1366:M_aps_c
is: SBO:0000247
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initial amount: NaN
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value: 0.4726359960765
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stoichiometry: 1.0
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units: dimensionless
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stoichiometry: 1.0
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meta s 0411
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notes: iJO1366:M_pap_c
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is: SBO:0000247
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stoichiometry: 1.0
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stoichiometry: 1.0
species: meta s 0312
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units: dimensionless
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value: 1.00189153835049
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meta e 1189
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initial amount: NaN
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type: Species
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stoichiometry: 1.0
species: meta s 0395
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notes: iJO1366:M_pimACP_c
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constant: false
initial amount: NaN
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type: Species
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is: SBO:0000247
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initial concentration: 0.1

meta s 0269
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is: CHEBI:32364
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in compartment: meta cell
is: SBO:0000247
initial amount: NaN
notes: iJO1366:M_3dhq_c
constant: false
type: Species
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units: dimensionless
value: 0.0019239974378098
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stoichiometry: 1.0
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meta e 1188
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initial amount: NaN
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notes: iJO1366:M_acgam1p_c
constant: false
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value: 0.563347557924554
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value: 0.0038479948756196
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value: 0.1
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stoichiometry: 2.0
species: meta s 0867
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meta e 0291
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boundary condition: true
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stoichiometry: 1.0
species: meta s 1358
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value: 0.1
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value: 0.1
type: LocalParameter

meta r 1210
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type: Reaction
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meta e 0803
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stoichiometry: 4.47E-4
species: meta s 1335
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initial amount: NaN
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is: CHEBI:29034
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is: C14819

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value: 0.1
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value: 0.01389
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units: dimensionless
value: 2.23E-4
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value: 0.1
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meta r 1211
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is: SBO:0000176
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type: Reaction
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value: 0.1
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meta e 0076
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is encoded by: eco:b0166
boundary condition: true

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units: dimensionless
value: 0.0409732499715063
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value: 0.1
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meta s 1496
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constant: true
type: Species
boundary condition: true
name: potassium
is: CHEBI:29103
is: C00238
initial concentration: 1.0
is: SBO:0000247

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value: 0.1
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stoichiometry: 1.0
species: meta s 1734
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meta r 0695
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type: Reaction
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is: SBO:0000323
value: 0.1
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meta r 1212
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is: SBO:0000176
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fast: false
type: Reaction
name: phosphoribosylformylglycinamidine synthase

meta e 1313
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is: SBO:0000252
is encoded by: eco:b4161
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initial concentration: 0.001
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boundary condition: true
initial amount: NaN
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stoichiometry: 1.0
species: meta s 1496
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stoichiometry: 1.0
species: meta s 1430
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value: 0.1
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stoichiometry: 1.0
species: meta s 1333
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is: SBO:0000322
value: 0.1
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meta s 1497
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constant: false
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is: C00254
is: SBO:0000247
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initial amount: NaN
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is: CHEBI:16666

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stoichiometry: 1.0
species: meta s 1095
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stoichiometry: 1.0
species: meta s 0543
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is: SBO:0000323
value: 0.1
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stoichiometry: 0.02617
species: meta s 0726
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value: 1.0
type: LocalParameter

meta e 0078
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type: Species
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initial concentration: 0.001
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has only substance units: false
is: SBO:0000252
boundary condition: true

meta s 1799
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boundary condition: false
is: C00655
name: Xanthosine 5'-phosphate
is: SBO:0000247
initial concentration: 0.1
is: CHEBI:57464
initial amount: NaN
type: Species
constant: false
has only substance units: false
in compartment: meta cell

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stoichiometry: 1.0
species: meta s 1736
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meta s 1040
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notes: iJO1366:M_2aobut_c
is: SBO:0000247
constant: false
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name: L-2-Amino-3-oxobutanoate
is: CHEBI:40673
initial amount: NaN
initial concentration: 0.1
boundary condition: false
is: C03508
type: Species

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0627
type: SpeciesReference

meta r 0697
type: Reaction
is: http://identifiers.org/ec-code/2.7.1.31
reversible: true
is: SBO:0000176
name: glycerate kinase
fast: false

meta s 0840
is: SBO:0000247
constant: true
initial concentration: 1.0
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has only substance units: false
is: C00023
name: Fe2+
type: Species
initial amount: NaN
boundary condition: true
is: CHEBI:18248
notes: iJO1366:M_fe2_e

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 1214
is: SBO:0000176
name: phosphoribosylglycinamide synthase
type: Reaction
reversible: true
fast: false
is: http://identifiers.org/ec-code/6.3.4.13

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 0077
is: P0A7E9
initial amount: NaN
type: Species
initial concentration: 0.001
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is encoded by: eco:b0171
has only substance units: false
is: SBO:0000252
constant: true
boundary condition: true
name: pyrH

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 1184
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is: SBO:0000252
boundary condition: true
type: Species
initial amount: NaN
is encoded by: eco:b3803
name: hemX
is: P09127
has only substance units: false
in compartment: meta cell
initial concentration: 0.001

http://identifiers.org/biomodels.db/BIOMD0000000470#_1f3056d0_5947_4998_8ffa_431a95b1a949
units: dimensionless
value: 0.2958
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 0185
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initial amount: NaN
boundary condition: true
is encoded by: eco:b0523
is: SBO:0000252
initial concentration: 0.001
type: Species
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is: P0AG18
has only substance units: false
name: purE

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stoichiometry: 1.0
species: meta s 0421
type: SpeciesReference

meta r 0969
type: Reaction
fast: false
name: molybdopterin synthase sulfurylase
is: SBO:0000176
reversible: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_38345378_db3c_4f51_a1a7_fd19680e6850
is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 0998
is: C01024
initial concentration: 0.1
constant: false
has only substance units: false
is: CHEBI:57845
initial amount: NaN
is: SBO:0000247
in compartment: meta cell
boundary condition: false
name: Hydroxymethylbilane
type: Species
notes: iJO1366:M_hmbil_c

http://identifiers.org/biomodels.db/BIOMD0000000470#d6b26f13_510d_43ff_856a_313cd9c1a073
stoichiometry: 1.0
species: meta s 1214
type: SpeciesReference

meta s 1390
is: SBO:0000247
has only substance units: false
initial concentration: 0.1
is: C01944
constant: false
is: CHEBI:57386
in compartment: meta cell
type: Species
initial amount: NaN
notes: iJO1366:M_occoa_c
boundary condition: false
name: Octanoyl-CoA (n-C8:0CoA)

http://identifiers.org/biomodels.db/BIOMD0000000470#fd44ddc4_90d8_4457_b084_309d14d18fc7
stoichiometry: 1.0
species: meta s 0867
type: SpeciesReference

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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units: dimensionless
value: 0.0131230753965474
type: LocalParameter

meta s 1644
has only substance units: false
notes: iJO1366:M_thmpp_c
name: Thiamine diphosphate
initial amount: NaN
is: C00068
constant: false
initial concentration: 0.1
is: SBO:0000247
boundary condition: false
is: CHEBI:58937
type: Species
in compartment: meta cell

http://identifiers.org/biomodels.db/BIOMD0000000470#d24f815b_1945_4686_85d3_ecbf3317e862
stoichiometry: 1.0
species: meta s 0337
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0421
type: SpeciesReference

meta e 1185
type: Species
initial amount: NaN
is encoded by: eco:b3804
constant: true
has only substance units: false
in compartment: meta cell
initial concentration: 0.001
name: hemD
is: P09126
is: SBO:0000252
boundary condition: true

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is: SBO:0000324
value: 0.0754749981219422
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1333
type: SpeciesReference

meta e 0184
boundary condition: true
name: purK
initial concentration: 0.001
is: SBO:0000252
constant: true
is: P09029
in compartment: meta cell
has only substance units: false
is encoded by: eco:b0522
type: Species
initial amount: NaN

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is: SBO:0000322
value: 0.1
type: LocalParameter

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units: dimensionless
value: 3.60143508877284E-5
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta r 0968
fast: false
reversible: true
name: molybdopterin synthase
type: Reaction
is: SBO:0000176

http://identifiers.org/biomodels.db/BIOMD0000000470#_57fa2a2f_2386_45c9_80bb_0f90001594d2
stoichiometry: 1.0
species: meta s 1372
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_9b5ec730_550a_4334_83a9_b14ddaef3f43
stoichiometry: 1.0
species: meta s 1098
type: SpeciesReference

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is: SBO:0000324
value: 0.00111699894443779
type: LocalParameter

meta s 1391
has only substance units: false
initial concentration: 0.1
in compartment: meta cell
notes: iJO1366:M_orn_c
name: Ornithine
boundary condition: false
is: C01602
is: SBO:0000247
initial amount: NaN
constant: false
type: Species
is: CHEBI:46912

http://identifiers.org/biomodels.db/BIOMD0000000470#_4c5544eb_5dab_4bb0_9941_413a4b10696b
stoichiometry: 1.0
species: meta s 1335
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 1643
type: Species
in compartment: meta cell
has only substance units: false
boundary condition: false
is: C01081
is: CHEBI:37575
notes: iJO1366:M_thmmp_c
initial amount: NaN
constant: false
name: Thiamin monophosphate
initial concentration: 0.1
is: SBO:0000247

meta r 0655
name: geranyltranstransferase
is: SBO:0000176
is: http://identifiers.org/ec-code/2.5.1.10
type: Reaction
fast: false
reversible: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_99936249_402a_4384_b13e_d2f9da4c55af
units: dimensionless
value: 0.1537
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 0099
is: CHEBI:58424
boundary condition: false
initial concentration: 0.1
type: Species
notes: iJO1366:M_prbatp_c
in compartment: meta cell
is: SBO:0000247
name: 1-(5-Phosphoribosyl)-ATP
is: C02739
initial amount: NaN
constant: false
has only substance units: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_10f0850c_0984_4b2e_80db_89d7f303d2c6
is: SBO:0000324
value: 0.428764698991882
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_9c7b9995_92af_424c_8be9_d29a27babcaf
stoichiometry: 1.0
species: meta s 1552
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_8a821491_1ed4_4e17_b5a7_e6e7ef99f82a
stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

meta e 1186
constant: true
is: P06983
type: Species
initial amount: NaN
boundary condition: true
in compartment: meta cell
is encoded by: eco:b3805
initial concentration: 0.001
has only substance units: false
name: hemC
is: SBO:0000252

http://identifiers.org/biomodels.db/BIOMD0000000470#_7f16760a_0278_4cfa_9d15_241638888a8a
units: dimensionless
value: 1.23556926891731E-4
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_144b31e8_c9ca_4498_bd9d_893687a62fb0
stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

meta s 0843
is: CHEBI:29034
boundary condition: true
constant: true
notes: iJO1366:M_fe3_e
has only substance units: false
is: C14819
initial amount: NaN
in compartment: meta extracellular
name: Fe3+
is: SBO:0000247
initial concentration: 1.0
type: Species

http://identifiers.org/biomodels.db/BIOMD0000000470#c33c26f4_e04b_4606_bb7e_60aba00c3945
stoichiometry: 1.0
species: meta s 0297
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_57819014_06ce_434d_b55b_de002be2b6a6
type: Reaction
is: SBO:0000176
fast: false
name: GTP cyclohydrolase II (25drapp)
reversible: true

meta r 0658
is: SBO:0000176
name: glucosamine-1-phosphate N-acetyltransferase
type: Reaction
reversible: true
fast: false
is: http://identifiers.org/ec-code/2.3.1.157

http://identifiers.org/biomodels.db/BIOMD0000000470#_5e2f8492_198b_46ae_89a3_f53b813f7842
stoichiometry: 1.0
species: meta s 0945
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#acece2fd_6347_4043_9b9a_3b1f8b87c6c8
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_32798a35_9253_48c7_acad_e1bb6a88db1a
name: 2,3,2'3'-Tetrakis(beta-hydroxymyristoyl)-D-glucosaminyl-1,6-beta-D-glucosamine 1,4'-bisphosphate
constant: false
initial concentration: 0.1
in compartment: meta cell
notes: iJO1366:M_lipidA_c
initial amount: NaN
has only substance units: false
type: Species
boundary condition: false
is: SBO:0000247

meta e 0186
name: lpxH
is: SBO:0000252
boundary condition: true
constant: true
initial concentration: 0.001
is encoded by: eco:b0524
in compartment: meta cell
type: Species
has only substance units: false
initial amount: NaN
is: P43341

http://identifiers.org/biomodels.db/BIOMD0000000470#_66ebe293_fc5b_4bdc_8b85_55dd7533080f
stoichiometry: 1.0
species: meta s 0543
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_40e35c2c_876d_4063_bbe7_076a6b5fdec0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#a9ddd52b_3683_42b9_b9d7_f22805bd8a3a
is: SBO:0000322
value: 1.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_508022b5_d335_49c8_9784_b09df7fc5f7f
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_54fa55d5_34ae_43b5_8b3c_c3a29841abab
stoichiometry: 1.0
species: meta s 1336
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_0046b990_2432_4d88_abe1_1deb1ce56c0a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_8437ea7f_65eb_42d9_8331_26aafda37d67
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#b3f0805b_545e_4316_b9d5_4331b9ec3540
stoichiometry: 1.0
species: meta s 1364
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_2a10de81_399f_4ce3_8827_f8a2de4c45ec
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_749361dc_a15b_416a_92f8_c7370c872be1
units: dimensionless
value: 0.0492981056959303
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_8cf05147_6fe0_4cee_a4e9_d399b01eb667
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_53f14f71_625a_42f2_86dc_ee33454a7b97
stoichiometry: 1.0
species: meta s 1038
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_0f02acda_22a1_48b2_a90c_0d6b6343919d
stoichiometry: 1.0
species: meta s 0454
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#f37ad247_8b61_41aa_96cb_13331c439217
stoichiometry: 1.0
species: meta s 1334
type: SpeciesReference

meta s 0994
is: SBO:0000247
constant: false
is: CHEBI:16136
initial concentration: 0.1
has only substance units: false
initial amount: NaN
notes: iJO1366:M_h2s_c
type: Species
in compartment: meta cell
name: Hydrogen sulfide
is: C00283
boundary condition: false

meta s 0096
is: C01302
initial concentration: 0.1
constant: false
in compartment: meta cell
notes: iJO1366:M_2cpr5p_c
is: CHEBI:58613
boundary condition: false
name: 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate
has only substance units: false
is: SBO:0000247
type: Species
initial amount: NaN

meta s 1394
has only substance units: false
initial concentration: 0.1
name: Orotate
initial amount: NaN
in compartment: meta cell
constant: false
is: SBO:0000247
type: Species
notes: iJO1366:M_orot_c
is: C00295
boundary condition: false
is: CHEBI:30839

http://identifiers.org/biomodels.db/BIOMD0000000470#_7c9c3b11_3145_40f5_8ee9_a340b879aca2
stoichiometry: 1.0
species: meta s 0328
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_830638e8_70cd_499f_9063_213703e76fd4
units: dimensionless
value: 0.0131230753965474
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_474a8d1e_c587_429d_b97e_1c9282fdb1eb
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_0316e180_b8d6_4c5f_8aef_7ec6dfb215ee
is: SBO:0000322
value: 1.0
type: LocalParameter

meta e 0188
is: P24186
in compartment: meta cell
name: folD
has only substance units: false
constant: true
initial amount: NaN
is: SBO:0000252
type: Species
boundary condition: true
initial concentration: 0.001
is encoded by: eco:b0529

http://identifiers.org/biomodels.db/BIOMD0000000470#_73ef58d0_9162_4d01_adaa_e97ac2329a20
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#b5ef565d_9615_4af5_9abe_58c2dc6c5618
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#b89415e0_af74_4463_96e0_1f2ce872de27
is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 1792
has only substance units: false
is: CHEBI:46398
boundary condition: false
initial amount: NaN
notes: iJO1366:M_utp_c
in compartment: meta cell
name: UTP
is: C00075
type: Species
is: SBO:0000247
constant: false
initial concentration: 0.1

http://identifiers.org/biomodels.db/BIOMD0000000470#_7452f768_04d7_4851_8cf1_77f23daa5b39
units: dimensionless
value: 1.06213701401227
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_1595d201_63f6_4e2f_bd1a_9de2a0136e5f
stoichiometry: 1.0
species: meta s 0421
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#e3f82a90_2aa1_4fc0_8251_3211ce50b8ff
stoichiometry: 1.0
species: meta s 0581
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#d06074e1_988b_478b_b71a_784618867a25
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#de092be9_2885_44c4_8866_5eb79c8d4fb7
units: dimensionless
value: 0.0131230753965474
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#a3ab6798_4a2b_4bf6_a530_e5cfefba04de
stoichiometry: 1.0
species: meta s 0971
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_5396689f_39ac_4ec5_aa68_cd56ce4174b7
stoichiometry: 1.0
species: meta s 0457
type: SpeciesReference

meta s 0098
is: SBO:0000247
boundary condition: false
name: 1-(5-Phosphoribosyl)-AMP
type: Species
has only substance units: false
is: C02741
initial amount: NaN
constant: false
in compartment: meta cell
notes: iJO1366:M_prbamp_c
is: CHEBI:59457
initial concentration: 0.1

meta s 1791
boundary condition: false
is: SBO:0000247
initial concentration: 0.1
has only substance units: false
constant: false
notes: iJO1366:M_uppg3_c
initial amount: NaN
is: CHEBI:57308
in compartment: meta cell
name: Uroporphyrinogen III
type: Species
is: C01051

http://identifiers.org/biomodels.db/BIOMD0000000470#_2f7485dc_f940_436d_9a99_9368a8e8cef7
stoichiometry: 2.0
species: meta s 0861
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_77814365_f80f_439e_b166_718f4d90d7fe
name: 4-aminobenzoate synthase
type: Reaction
is: SBO:0000176
fast: false
reversible: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_318a73f0_65b1_4f5d_a94a_05e9cff87802
stoichiometry: 1.0
species: meta s 0543
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_4b043a36_8da3_4c60_ab99_26603d278f13
is: SBO:0000324
value: 0.00240326533808495
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_6a427c79_9fa6_48d3_be70_c0b923920dcd
stoichiometry: 1.0
species: meta s 1497
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#e8a2991d_6f51_47bd_9a03_ddb08d094433
is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 0097
in compartment: meta cell
initial concentration: 0.1
is: SBO:0000247
is: CHEBI:58435
type: Species
is: C04896
notes: iJO1366:M_prfp_c
has only substance units: false
initial amount: NaN
constant: false
boundary condition: false

http://identifiers.org/biomodels.db/BIOMD0000000470#f2258b92_fe52_4836_8eb4_e8e384024089
is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 1397
name: Orotidine 5'-phosphate
is: C01103
boundary condition: false
notes: iJO1366:M_orot5p_c
is: CHEBI:57538
is: SBO:0000247
constant: false
type: Species
has only substance units: false
initial concentration: 0.1
initial amount: NaN
in compartment: meta cell

http://identifiers.org/biomodels.db/BIOMD0000000470#_85f0f58c_5e9f_4b5b_98ab_77bef4b9451e
stoichiometry: 1.0
species: meta s 1138
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_613469c5_af01_4a4e_b194_a3f60a39f292
in compartment: meta cell
boundary condition: false
has only substance units: false
is: SBO:0000247
type: Species
initial concentration: 0.1
name: [4Fe-4S] iron-sulfur cluster
notes: iJO1366:M_4fe4s_c
initial amount: NaN
constant: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_7377a86d_bbd7_4413_b542_1fabff20ac7a
stoichiometry: 1.0
species: meta s 0543
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_157654db_da88_4d21_9daf_db295234c31f
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_77aa6b09_b8b2_40df_b271_cd28fc82548f
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_204b780f_1b0c_4040_ac43_f9f005625c15
units: dimensionless
value: 0.034336359169748
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e6fd1c53_dc6c_47d3_b252_2d4af3645d8f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#f58f95af_9817_4bcf_b7d7_4fa7b2153898
stoichiometry: 1.0
species: meta s 0372
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_3594acca_070f_4165_ba2e_863827e5d576
stoichiometry: 1.0
species: meta s 1735
type: SpeciesReference

meta s 0936
initial concentration: 0.1
type: Species
constant: false
in compartment: meta cell
name: Glycolaldehyde
is: CHEBI:17071
is: SBO:0000247
initial amount: NaN
is: C00266
boundary condition: false
has only substance units: false
notes: iJO1366:M_gcald_c

http://identifiers.org/biomodels.db/BIOMD0000000470#ff695f32_1f2e_480a_ba13_dfd894d6033a
is: SBO:0000322
value: 1.0
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_5a853c9a_bf31_47f5_9466_4c139b2603e2
stoichiometry: 1.0
species: meta s 0352
type: SpeciesReference

meta r 0423
reversible: true
type: Reaction
is: http://identifiers.org/ec-code/5.4.99.5
is: SBO:0000176
fast: false
name: chorismate mutase

http://identifiers.org/biomodels.db/BIOMD0000000470#fea71885_69f0_49ee_ad91_7ecf208172ee
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_76aa9dc5_8ed6_448e_93bf_2637c8063cf9
is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 0116
name: 1-deoxy-D-xylulose 5-phosphate
type: Species
is: SBO:0000247
boundary condition: false
has only substance units: false
initial amount: NaN
initial concentration: 0.1
notes: iJO1366:M_dxyl5p_c
constant: false
in compartment: meta cell
is: C11437
is: CHEBI:57792

meta s 0937
constant: false
is: C00160
boundary condition: false
in compartment: meta cell
is: SBO:0000247
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is: CHEBI:17497
notes: iJO1366:M_glyclt_c
name: Glycolate
has only substance units: false
initial concentration: 0.1
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stoichiometry: 1.0
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value: 0.1
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meta s 0119
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constant: false
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is version of: CHEBI:57970
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constant: false
initial concentration: 0.1
boundary condition: false
name: D-Arabinose 5-phosphate
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scale: -3
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meta s 0726
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is: C00131
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meta s 1358
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is: CHEBI:17981
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is: C00979
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meta e 0451
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is: P52647
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units: dimensionless
value: 2.77033467884759E-7
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meta s 1508
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is: C00032
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is: CHEBI:60344
notes: iJO1366:M_pheme_c
name: Protoheme
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is: SBO:0000324
value: 0.579972128587692
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meta s 1204
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name: Lipid A Disaccharide
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is: SBO:0000323
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units: dimensionless
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notes: iJO1366:M_mptamp_c
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meta r 0084
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stoichiometry: 1.0
species: meta s 0412
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http://identifiers.org/biomodels.db/BIOMD0000000470#_8766233a_636f_40ac_8e23_9f28ef467e28
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#a5957de4_fe9e_42ec_a89b_7f269345e773
is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 0721
initial amount: NaN
boundary condition: false
initial concentration: 0.1
constant: false
name: D-Xylulose 5-phosphate
is: C00231
type: Species
is: SBO:0000247
has only substance units: false
in compartment: meta cell
is: CHEBI:57737
notes: iJO1366:M_xu5p_DASH_D_c

http://identifiers.org/biomodels.db/BIOMD0000000470#_049afce3_e2c5_4dbf_b573_50782cf403d3
units: dimensionless
value: 0.0306260499279916
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_322919d5_4c28_448a_9286_c1f55f7d9059
stoichiometry: 1.0
species: meta s 0310
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http://identifiers.org/biomodels.db/BIOMD0000000470#_4326fe13_3eba_40c4_9ec5_cd1d69b0b900
stoichiometry: 1.0
species: meta s 0160
type: SpeciesReference

W3 CDTF: Tue Nov 22 00:00:00 GMT 2011

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is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_3a4433ef_ad6c_443f_8948_aa4d42e5f79d
stoichiometry: 1.0
species: meta s 1578
type: SpeciesReference

meta r 0425
is: http://identifiers.org/ec-code/4.2.3.5
name: chorismate synthase
reversible: true
type: Reaction
fast: false
is: SBO:0000176

http://identifiers.org/biomodels.db/BIOMD0000000470#_6d255c9c_1880_42e7_b23f_25a8650349c8
is: SBO:0000324
value: 0.539223483499281
type: LocalParameter

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units: dimensionless
value: 0.0492981056959429
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_9e5a39b8_c172_4dfd_9bcf_45bd973db5d2
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#a7950a7f_161d_49b3_8400_52eee84a1c5c
stoichiometry: 1.0
species: meta s 1430
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stoichiometry: 2.0
species: meta s 0862
type: SpeciesReference

meta e 0428
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name: trpD
boundary condition: true
is: P00904
is encoded by: eco:b1263
initial concentration: 0.001
constant: true
is: SBO:0000252
type: Species
in compartment: meta cell

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is: SBO:0000322
value: 0.1
type: LocalParameter

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units: dimensionless
value: 0.484650799082247
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_4e4ceed2_4f4c_4c90_b065_75d9f70c7b1c
stoichiometry: 1.0
species: meta s 0502
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is: SBO:0000324
value: 0.11744113604437
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#d184a90e_27f1_4c36_b56e_061992797dc4
is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_119826e3_8511_41fd_be66_b4a055afdbf9
units: dimensionless
value: 0.01301
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#a3d4846c_e023_4c3b_a6c7_41f4883cb57e
stoichiometry: 1.0
species: meta s 1336
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#bc62a44d_9287_493f_9032_e4a793d49704
is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 0934
name: Malonyl-CoA methyltransferase
type: Reaction
reversible: true
is: SBO:0000176
fast: false

meta e 0001
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has only substance units: false
initial concentration: 0.001
is encoded by: eco:b0002
constant: true
is: P00561
in compartment: meta cell
boundary condition: true
type: Species
is: SBO:0000252
initial amount: NaN

http://identifiers.org/biomodels.db/BIOMD0000000470#daa44661_832b_443b_9d6e_f2802b63c9ed
stoichiometry: 1.0
species: meta s 1072
type: SpeciesReference

meta e 0429
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is encoded by: eco:b1264
initial concentration: 0.001
is: SBO:0000252
type: Species
is: P00895
name: trpE
in compartment: meta cell
initial amount: NaN
has only substance units: false
constant: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_611c6db0_f6c6_49fd_818f_8be2e0d6ff93
units: dimensionless
value: 0.0107821425888425
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#b7fbc5e3_1d4b_4d42_bb8f_e8ad0f5e2533
boundary condition: false
type: Species
is: SBO:0000247
name: cis-hexadec-9-enoyl-[acyl-carrier protein] (n-C16:1)
initial concentration: 0.1
in compartment: meta cell
initial amount: NaN
notes: iJO1366:M_hdeACP_c
constant: false
has only substance units: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_1b26595b_7620_40af_a609_29f2ac7cf979
is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 1.08719360618047
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_41705026_c013_493f_971e_4967c2ce7797
is: SBO:0000324
value: 0.641479307008121
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_3b973caf_6bca_4628_bd58_5d48b471f62d
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#f2ac2605_6556_4945_800e_e55a36347113
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 0935
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is: http://identifiers.org/ec-code/2.3.1.39
type: Reaction
fast: false
is: SBO:0000176
reversible: true

http://identifiers.org/biomodels.db/BIOMD0000000470#db5bba3b_5ad3_4432_8a00_2bb936fd6088
units: dimensionless
value: 2.77033467884759E-7
type: LocalParameter

meta e 0002
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is: SBO:0000252
initial amount: NaN
has only substance units: false
name: thrB
initial concentration: 0.001
is: P00547
in compartment: meta cell
boundary condition: true
constant: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_090f5dbd_759b_4fdf_8d28_32bbc70ac752
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#d4c94b58_f890_435a_aa7b_9a8dda5a2bda
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#d87102e6_1c64_4a8a_bffe_502baaba4c57
stoichiometry: 1.0
species: meta s 1561
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#c1a16ad2_4b1f_4bfb_8872_643820c0f7fd
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_7d68710b_7712_4675_9448_1829fb694695
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_02206308_bdab_4363_802a_86aac9eff0ac
units: dimensionless
value: 0.02702
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#c83a8bf0_830b_46d1_b541_f269a951c233
stoichiometry: 1.0
species: meta s 0421
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_43cfeda1_04ac_41f2_a6d3_9821ae5a87dc
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta e 0152
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initial concentration: 0.001
is: P0A9J4
name: panE
type: Species
in compartment: meta cell
is: SBO:0000252
has only substance units: false
boundary condition: true
initial amount: NaN

meta s 0838
is: C00023
has only substance units: false
in compartment: meta cell
type: Species
is: SBO:0000247
is: CHEBI:18248
initial concentration: 0.1
boundary condition: false
notes: iJO1366:M_fe2_c
constant: false
name: Fe2+
initial amount: NaN

http://identifiers.org/biomodels.db/BIOMD0000000470#_6370c159_d94c_4f36_880c_6d0ed62a1cc5
units: dimensionless
value: 0.146909255332631
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_65dc2cba_baf2_4429_9bc6_69a7687354a8
is: SBO:0000324
value: 7.97856388811725E-4
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_1ee8f415_e342_4052_aa56_3dad295f65a3
is: SBO:0000324
value: 1.2225985619289
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#edd21929_f69d_4273_8a91_78ab1c083f85
notes: iJO1366:M_iscs_c
is: SBO:0000247
name: IscS sulfur acceptor protein
has only substance units: false
constant: false
boundary condition: false
initial amount: NaN
type: Species
in compartment: meta cell
initial concentration: 0.1

http://identifiers.org/biomodels.db/BIOMD0000000470#_42afa99f_2b22_405a_8011_85e18efa6656
stoichiometry: 1.0
species: meta s 1413
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#ecb4ef20_4d78_4410_9616_426c96331d1e
is: SBO:0000281
value: 0.2
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_2ba5d7d2_7352_4d34_9bee_d1e685ea3e8a
stoichiometry: 1.0
species: meta s 0585
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#a20de86e_8e1d_4b49_a2f2_1aba5dc1d391
is: SBO:0000324
value: 0.719417132663872
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_28f6b9be_64a2_4e82_a2bc_dda209dd8439
units: dimensionless
value: 0.0229099752501236
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_2cfc4aec_681e_4aab_981b_3292618d26ee
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_43145099_7db1_4db7_b3fb_22c3a8e9695b
stoichiometry: 1.0
species: meta s 1333
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
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stoichiometry: 1.0
species: meta s 0913
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stoichiometry: 1.0
species: meta s 1333
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stoichiometry: 1.0
species: meta s 0789
type: SpeciesReference

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is: SBO:0000324
value: 0.513869380474194
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_83b61c77_87b2_48b9_bbe2_554cf35d329a
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_40343c73_9938_4463_b2c0_6681d02a2535
stoichiometry: 1.0
species: meta s 1643
type: SpeciesReference

meta e 0005
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is: SBO:0000252
is: P0A870
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is encoded by: eco:b0008
constant: true
boundary condition: true
initial amount: NaN
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initial concentration: 0.001
has only substance units: false

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 0150
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initial concentration: 0.001
constant: true
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has only substance units: false
boundary condition: true
is: P22939
type: Species
name: ispA
is: SBO:0000252

http://identifiers.org/biomodels.db/BIOMD0000000470#_43381b72_38ce_4e24_bf2f_424338079bed
stoichiometry: 1.0
species: meta s 1265
type: SpeciesReference

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is: SBO:0000324
value: 9.46346327942155E-4
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_032366ef_7bfa_45c4_9629_45e517ac2f00
units: dimensionless
value: 0.00384799487561516
type: LocalParameter

meta s 1095
boundary condition: false
has only substance units: false
constant: false
in compartment: meta cell
is: CHEBI:29985
is: SBO:0000247
initial concentration: 0.1
type: Species
initial amount: NaN
is: C00025
name: L-Glutamate
notes: iJO1366:M_glu_DASH_L_c

http://identifiers.org/biomodels.db/BIOMD0000000470#_82f43056_2ceb_4b9f_ac43_d23cd7f7d944
is: SBO:0000324
value: 0.0058071755638692
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#a23f9e8d_8ddc_4062_9516_7dc7faa34206
stoichiometry: 1.0
species: meta s 0807
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http://identifiers.org/biomodels.db/BIOMD0000000470#ff58ffa6_ea11_4e28_9030_6cd966517abf
stoichiometry: 1.0
species: meta s 0783
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http://identifiers.org/biomodels.db/BIOMD0000000470#_2986686a_233c_4ae8_808e_1cb2a34e25bf
stoichiometry: 1.0
species: meta s 1407
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_8ef3df06_9ab8_4da4_88ff_71ee9e043091
is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 0006
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type: Species
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is: SBO:0000252
initial concentration: 0.001
has only substance units: false
in compartment: meta cell
name: mog
is encoded by: eco:b0009
boundary condition: true
initial amount: NaN

ORG:
  orgname: EMBL-EBI
n:
  given: Nick
  family: Juty

http://identifiers.org/biomodels.db/BIOMD0000000470#_4ca4541f_df2a_4392_b40e_f328ee344cbc
is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 0151
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is encoded by: eco:b0423
name: thiI
is: P77718
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boundary condition: true
type: Species
is: SBO:0000252
constant: true
initial amount: NaN

http://identifiers.org/biomodels.db/BIOMD0000000470#_64e6fe62_3eb0_4efa_ad7a_97c40ad1323f
is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 1098
is: SBO:0000247
has only substance units: false
in compartment: meta cell
type: Species
name: L-Glutamate 1-semialdehyde
notes: iJO1366:M_glu1sa_c
is: C03741
boundary condition: false
initial amount: NaN
initial concentration: 0.1
is: CHEBI:15757
constant: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_64164dc7_790a_44e4_a782_9064bbe23cf1
value: 0.1
type: LocalParameter

meta e 0003
constant: true
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has only substance units: false
initial concentration: 0.001
is encoded by: eco:b0004
type: Species
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boundary condition: true
is: SBO:0000252
initial amount: NaN

http://identifiers.org/biomodels.db/BIOMD0000000470#_47db4bae_85c4_4796_bfc5_745b4333b05b
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_9cfec80b_dfdc_4125_b542_2e0d78f76016
stoichiometry: 1.0
species: meta s 0530
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_2873bb0e_2619_45b1_92e7_80c647aabc58
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_40c2efc5_3188_4c7a_98f3_a9c6f735a55d
is: SBO:0000324
value: 0.183756299568026
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e34deece_6573_409b_ba9c_f32a400cd81b
units: dimensionless
value: 6.17784634458656E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e4bff92b_73fe_40e8_bba9_83d6e203591c
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_193a92fe_de8f_420d_9a49_9cb1814b0ae1
units: dimensionless
value: 3.08892317229363E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_6307e750_fae8_4b81_93f6_995f369ead70
units: dimensionless
value: 7.97856388897518E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#d3434887_9170_4ac9_9fd4_cd13aefb5aa4
stoichiometry: 1.0
species: meta s 1105
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_088e1d32_6e58_45c3_887f_a20e831be172
stoichiometry: 1.0
species: meta s 0042
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#b3dee7b4_f34c_4696_9532_6bac43c17331
name: growth
type: Reaction
reversible: false
fast: false
is: SBO:0000176

meta e 1196
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in compartment: meta cell
is: P25665
is encoded by: eco:b3829
initial concentration: 0.001
constant: true
initial amount: NaN
is: SBO:0000252
boundary condition: true
type: Species
name: metE

http://identifiers.org/biomodels.db/BIOMD0000000470#b25988b2_a67e_42fb_9f57_96004f24007a
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_7a536848_92bb_47dd_ba06_abc2f984e16c
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_24e07b23_3127_4186_9935_8c19bb0a2251
units: dimensionless
value: 0.0402391112802679
type: LocalParameter

meta s 0941
initial amount: NaN
type: Species
boundary condition: false
in compartment: meta cell
name: Glyoxylate
constant: false
is: C00048
initial concentration: 0.1
notes: iJO1366:M_glx_c
is: CHEBI:36655
is: SBO:0000247
has only substance units: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_39959c79_f19f_4f6d_beac_9e45dedd56e2
initial concentration: 0.1
has only substance units: false
notes: iJO1366:M_murein5p5p_p
name: two linked disacharide pentapeptide murein units (uncrosslinked, middle of chain)
initial amount: NaN
in compartment: meta cell
type: Species
constant: false
boundary condition: false
is: SBO:0000247

http://identifiers.org/biomodels.db/BIOMD0000000470#eb620491_eb79_4ee9_b4a6_6c3583ed7c88
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_85dcecd2_332d_476c_8097_8f47d8fb2f27
is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0575
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units: dimensionless
value: 0.0414265806134143
type: LocalParameter

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stoichiometry: 2.23E-4
species: meta s 1644
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stoichiometry: 1.0
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value: 1.0
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is: SBO:0000281
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stoichiometry: 1.0
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value: 0.1
type: LocalParameter

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initial concentration: 0.1
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type: Species
is: C03287
boundary condition: false
is: SBO:0000247
in compartment: meta cell
initial amount: NaN
notes: iJO1366:M_glu5p_c
has only substance units: false

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stoichiometry: 1.0
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value: 0.1
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units: dimensionless
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value: 0.1
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meta r 0297
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reversible: true
fast: false
name: adenosylmethionine-8-amino-7-oxononanoate transaminase
type: Reaction
is: SBO:0000176

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is: SBO:0000323
value: 0.1
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is: SBO:0000281
value: 0.2
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0047
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species: meta s 1733
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value: 0.1
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value: 0.078522366274041
type: LocalParameter

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is: SBO:0000322
value: 0.1
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value: 0.1
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meta r 1392
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is: SBO:0000176
reversible: true
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type: Reaction

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stoichiometry: 1.0
species: meta s 0536
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stoichiometry: 1.0
species: meta s 0467
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meta s 0942
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initial concentration: 0.1
is: SBO:0000247
initial amount: NaN
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in compartment: meta cell
is: C00144
type: Species
constant: false

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units: dimensionless
value: 0.0492981056959303
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units: dimensionless
value: 1.24388027294171E-4
type: LocalParameter

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is: SBO:0000322
value: 0.1
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meta r 1399
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type: Reaction
reversible: true
is: SBO:0000176
is: http://identifiers.org/ec-code/6.3.2.9

meta s 0945
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name: GTP
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constant: false
is: C00044
initial concentration: 0.1
is: CHEBI:37565
initial amount: NaN
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has only substance units: false
boundary condition: false

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stoichiometry: 1.0
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stoichiometry: 1.0
species: meta s 1335
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meta e 1086
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constant: true
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has only substance units: false
type: Species
name: xylA
initial concentration: 0.001
is: P00944
boundary condition: true
is encoded by: eco:b3565
is: SBO:0000252

http://identifiers.org/biomodels.db/BIOMD0000000470#_02206756_cd9a_45c0_96da_b6cdfe878dfa
is: SBO:0000322
value: 0.1
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units: dimensionless
value: 9.26676951688061E-5
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initial amount: NaN
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constant: false
notes: iJO1366:M_bmocogdp_c
is: SBO:0000247
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initial concentration: 0.1

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 0292
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type: Reaction
is: SBO:0000176
reversible: true
is: http://identifiers.org/ec-code/2.7.1.20
name: adenosine kinase

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is: SBO:0000322
value: 0.1
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units: dimensionless
value: 0.0343363591697952
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value: 0.310221686966292
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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000322
value: 0.1
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stoichiometry: 1.0
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value: 0.18321885463929
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stoichiometry: 1.0
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is: SBO:0000323
value: 0.1
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meta r 1397
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fast: false
reversible: true
is: SBO:0000176

meta e 0425
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is encoded by: eco:b1260
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constant: true
boundary condition: true
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units: dimensionless
value: 0.0807006804356794
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stoichiometry: 1.0
species: meta s 1242
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stoichiometry: 1.0
species: meta s 1265
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is: SBO:0000324
value: 0.00441757568683278
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meta e 0426
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is encoded by: eco:b1261
is: P0A879
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type: Species
initial amount: NaN
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is: SBO:0000324
value: 3.72332981485438E-4
type: LocalParameter

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is: SBO:0000322
value: 0.1
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stoichiometry: 1.0
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value: 5.95621956989353E-5
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is: SBO:0000324
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is: SBO:0000324
value: 0.739148841448322
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stoichiometry: 1.0
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stoichiometry: 1.0
species: meta s 1792
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stoichiometry: 1.0
species: meta s 0860
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stoichiometry: 1.0
species: meta s 1430
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meta e 0427
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boundary condition: true

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value: 0.1
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is: SBO:0000324
value: 2.5137721878991
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is: SBO:0000323
value: 0.1
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meta e 0867
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constant: true
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is encoded by: eco:b2747
is: Q46893
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type: Species

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is: SBO:0000281
value: 0.2
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1072
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units: dimensionless
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is: SBO:0000322
value: 0.1
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stoichiometry: 2.0
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meta e 0866
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is: SBO:0000252

http://identifiers.org/biomodels.db/BIOMD0000000470#_2599c221_09ed_45fb_853c_768304bb197e
stoichiometry: 1.0
species: meta s 0229
type: SpeciesReference

meta r 1006
fast: false
is: SBO:0000176
reversible: true
name: NAD kinase
is: http://identifiers.org/ec-code/2.7.1.23
type: Reaction

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stoichiometry: 1.0
species: meta s 0663
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stoichiometry: 1.0
species: meta s 1334
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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta s 0600
name: D-Alanine
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initial amount: NaN
notes: iJO1366:M_ala_DASH_D_c
is: C00133
has only substance units: false
type: Species
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is: SBO:0000247
constant: false
is: CHEBI:15570

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units: dimensionless
value: 6.17784634458656E-5
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0421
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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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units: dimensionless
value: 0.2905
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value: 0.1
type: LocalParameter

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is: SBO:0000185
fast: false
reversible: false
name: CO2 transport via diffusion (extracellular to periplasm)
type: Reaction

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is: SBO:0000324
value: 1.69542598813101
type: LocalParameter

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value: 0.1
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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_94d9f25a_c7ac_4b58_9128_7933a6b58e5f
stoichiometry: 1.0
species: meta s 0116
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_492163ac_fd80_4962_bad7_a47062663f17
stoichiometry: 1.0
species: meta s 0311
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_01e09838_2586_4f7b_8fd4_a2d283adf88b
stoichiometry: 1.0
species: meta s 0467
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#b7bde6b7_f1a8_49fc_b597_fc9f262a785a
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#d5e76eb8_2304_4e00_99ac_4e9ed1fe6b45
is: SBO:0000324
value: 7.48409239195455
type: LocalParameter

meta r 1008
is: http://identifiers.org/ec-code/6.3.1.5
name: NAD synthase (nh3)
is: SBO:0000176
fast: false
reversible: true
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000470#b05bc4f6_ec0e_44c5_a266_db774367d260
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e87b3e79_e22b_494a_8e57_11a8568c9482
units: dimensionless
value: 0.2632
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_64ce893e_69bd_4f4a_82c8_6c3f38ff6da3
stoichiometry: 1.0
species: meta s 0395
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_1f91077e_bb46_4639_a4ed_913a1d9d4560
is: SBO:0000322
value: 1.0
type: LocalParameter

meta s 0128
name: 1-Pyrroline-5-carboxylate
type: Species
is: SBO:0000247
is: CHEBI:17388
boundary condition: false
has only substance units: false
is: C03912
initial concentration: 0.1
initial amount: NaN
constant: false
in compartment: meta cell
notes: iJO1366:M_1pyr5c_c

http://identifiers.org/biomodels.db/BIOMD0000000470#_82d3f451_a51a_45d4_bed3_e3ec11877766
stoichiometry: 1.0
species: meta s 0047
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_101ada43_10e3_43ee_8fa9_984166dde349
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_660d247f_fab6_42c8_8792_a1940fdcf325
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_17507e75_683f_49b6_aebe_1b6faf923f7f
stoichiometry: 1.0
species: meta s 0033
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#be86a54e_a049_4198_b48a_f558ff820e7d
stoichiometry: 1.0
species: meta s 1110
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_88454b4e_b917_49b3_ba18_ed4451398f51
units: dimensionless
value: 3.08892317453432E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_9eb30ae1_4ed4_4859_a166_7a568c70ebc8
stoichiometry: 1.0
species: meta s 1334
type: SpeciesReference

meta s 0502
in compartment: meta cell
is: CHEBI:58228
type: Species
boundary condition: false
notes: iJO1366:M_cbp_c
initial amount: NaN
has only substance units: false
is: C00169
is: SBO:0000247
name: Carbamoyl phosphate
initial concentration: 0.1
constant: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_44971731_7b8f_4f88_9726_6da477c7628b
stoichiometry: 1.0
species: meta s 0945
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#b5a4f9ce_11fa_4c91_b406_f3e0c26f6871
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_9af9357b_8f71_4faa_847a_848a8f2a2cf9
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#dc42af16_7982_4804_906d_ff9ec5fa61ba
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_050fb99e_2096_4765_9b6d_e0c3d47b2184
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_22b64c6f_f63c_42ae_9a98_ea3b869462e2
stoichiometry: 1.0
species: meta s 1333
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_6ccc1c5d_c53f_4aae_91ff_d61031ce23b2
stoichiometry: 1.0
species: meta s 0233
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#e1af5a72_5ef1_4a83_a56e_c85baab06d97
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_0542ad90_59ea_4dc8_bd40_f1eb614fc6d7
stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

meta s 1211
in compartment: meta cell
is: CHEBI:16026
initial amount: NaN
initial concentration: 0.1
name: LL-2,6-Diaminoheptanedioate
type: Species
has only substance units: false
notes: iJO1366:M_26dap_DASH_LL_c
is: C00666
constant: false
boundary condition: false
is: SBO:0000247

meta e 0869
initial concentration: 0.001
is: P23845
has only substance units: false
constant: true
boundary condition: true
is: SBO:0000252
initial amount: NaN
type: Species
name: cysN
in compartment: meta cell
is encoded by: eco:b2751

http://identifiers.org/biomodels.db/BIOMD0000000470#_3b89436a_9be0_460f_964c_a14389484050
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e522df93_f557_4aa2_a709_d1b2ee22b0f4
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#fad31099_3f68_4b7b_945b_2cc9ee9a6d57
stoichiometry: 1.0
species: meta s 1644
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_93941758_c1c3_4927_be7a_05c6e02e23ee
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_07e181a6_ec48_4bad_90e9_a353d82acbf8
units: dimensionless
value: 0.00269553564721213
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_08506337_dffe_4be2_bcce_f1a556013bf8
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e7a9a51f_3e08_42c5_82c7_0fbc3a835196
stoichiometry: 1.0
species: meta s 1101
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#bf3352e6_f75c_4b8c_91f6_6a0964b5fa9d
is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 0868
is: P0A6J1
in compartment: meta cell
constant: true
initial concentration: 0.001
has only substance units: false
name: cysC
boundary condition: true
is: SBO:0000252
initial amount: NaN
type: Species
is encoded by: eco:b2750

http://identifiers.org/biomodels.db/BIOMD0000000470#_765d8f82_3fd9_40d2_aa72_0d086a99c0db
stoichiometry: 1.0
species: meta s 0783
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_1b4c0840_857c_439b_8a06_8f1d910433d3
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_9a4a419f_25f0_4d61_b6c1_386c81dca3c9
units: dimensionless
value: 9.82083645361517E-5
type: LocalParameter

meta s 1212
in compartment: meta cell
type: Species
is: CHEBI:18420
boundary condition: false
constant: false
name: magnesium
initial concentration: 0.1
initial amount: NaN
is: SBO:0000247
has only substance units: false
notes: iJO1366:M_mg2_c
is: C00305

http://identifiers.org/biomodels.db/BIOMD0000000470#d53a3e59_6508_49bb_8cbd_e1186817eb16
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ad56360b_fb22_4fe2_8d29_ab64aa913c07
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 1391
is described by: http://identifiers.org/isbn/1555810845
reversible: true
type: Reaction
fast: false
name: UDP-N-acetylglucosamine acyltransferase
is: http://identifiers.org/ec-code/2.3.1.129
is: SBO:0000176

http://identifiers.org/biomodels.db/BIOMD0000000470#_6892c746_e647_45c0_a69f_6f106cf277fe
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#f32b185d_17c0_4dd9_b420_faf9f1859ddf
is: SBO:0000324
value: 4.32449244111493E-4
type: LocalParameter

meta s 0929
type: Species
is: CHEBI:15428
is: C00037
constant: false
notes: iJO1366:M_gly_c
has only substance units: false
initial concentration: 0.1
name: Glycine
is: SBO:0000247
initial amount: NaN
in compartment: meta cell
boundary condition: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_2ebf69e1_4e4b_4c58_bd83_75987bc8525a
stoichiometry: 1.0
species: meta s 0945
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#d9c5ac9d_7f0b_4129_8d3d_cda32555b49a
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_9912961f_443a_4a20_b31b_6a9300791f4a
units: dimensionless
value: 2.77033467884759E-7
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#a226dbd0_9445_47b8_8566_c6609189f212
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#d23a876c_51da_42be_8bc4_6a3227f06e90
units: dimensionless
value: 7.97856388897518E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_7859afea_7a17_4496_b76d_5a6faf7383ea
stoichiometry: 1.0
species: meta s 0271
type: SpeciesReference

meta r 0418
is: http://identifiers.org/ec-code/2.7.7.41
is: SBO:0000176
fast: false
reversible: true
name: CDP-diacylglycerol synthetase (n-C16:0)
type: Reaction

meta s 0123
notes: iJO1366:M_h2mb4p_c
is: SBO:0000247
initial concentration: 0.1
is: C11811
is: CHEBI:128753
name: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
initial amount: NaN
constant: false
in compartment: meta cell
boundary condition: false
has only substance units: false
type: Species

http://identifiers.org/biomodels.db/BIOMD0000000470#_91591d18_8a03_4d27_a034_1c7ead7aaf1f
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_8712d1f2_a075_4977_adf9_bbf686a92f30
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_7a75e1ea_b6f1_445e_a2fd_903362fa1b5b
units: dimensionless
value: 0.121101856295072
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_66a99f6e_4edf_463b_ba9c_36c8c6840ae5
is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 1367
is: C01118
initial concentration: 0.1
has only substance units: false
name: O-Succinyl-L-homoserine
is: SBO:0000247
notes: iJO1366:M_suchms_c
is: CHEBI:57661
boundary condition: false
in compartment: meta cell
type: Species
constant: false
initial amount: NaN

meta s 1214
is: SBO:0000247
constant: true
in compartment: meta extracellular
is: CHEBI:18420
type: Species
is: C00305
initial concentration: 1.0
boundary condition: true
has only substance units: false
initial amount: NaN
notes: iJO1366:M_mg2_e
name: magnesium

http://identifiers.org/biomodels.db/BIOMD0000000470#_834c2629_a2ea_4f38_9eff_022c967df833
stoichiometry: 1.0
species: meta s 0337
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#b3b264c8_6c45_4ec2_b63e_b33e0cb5725b
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_751d396e_d3ba_47fe_b658_0d09b4daeb46
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e36b3541_b8bc_44fd_bd09_38fd25bbc5cd
is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 0008
initial concentration: 0.001
boundary condition: true
name: ribF
type: Species
initial amount: NaN
constant: true
in compartment: meta cell
is encoded by: eco:b0025
has only substance units: false
is: P0AG40
is: SBO:0000252

http://identifiers.org/biomodels.db/BIOMD0000000470#_92dccb6c_1185_401f_9285_8abac66c487e
stoichiometry: 1.0
species: meta s 1333
type: SpeciesReference

meta r 0951
type: Reaction
is: SBO:0000176
is: http://identifiers.org/ec-code/2.5.1.6
fast: false
reversible: true
name: methionine adenosyltransferase

http://identifiers.org/biomodels.db/BIOMD0000000470#_5c97b867_adb8_4520_9920_44c9ed860799
stoichiometry: 1.0
species: meta s 0704
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_357b63a7_2f57_441e_b046_4ffd814dbfaf
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_2fb6a0d3_e9aa_42f2_9bf3_ea4883f58ac8
stoichiometry: 1.0
species: meta s 0863
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_81281b2b_2eb4_4401_8e9f_c992805fa519
units: dimensionless
value: 0.00884013797559936
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_040f9741_7ff3_4fc5_8628_896f4b387e45
is: SBO:0000324
value: 0.295788634175582
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_78e1ddee_ecbd_47cc_868f_9d01cc3c8ebe
units: dimensionless
value: 6.1778463445417E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#afe3ff0b_b6cc_44c4_a072_0cabeb32fb3a
stoichiometry: 1.0
species: meta s 0575
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_21a69fe6_2261_481c_86a6_f033340da476
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta s 0121
in compartment: meta cell
is: SBO:0000247
has only substance units: false
boundary condition: false
is version of: CHEBI:57970
constant: false
type: Species
initial concentration: 0.1
name: 1-hexadecanoyl-sn-glycerol 3-phosphate
initial amount: NaN
notes: iJO1366:M_1hdecg3p_c
is version of: C00681

http://identifiers.org/biomodels.db/BIOMD0000000470#dbe129c8_83cf_4bf7_911d_2eee8065b874
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_2c9ad0a2_e5c8_48e1_a541_01cac12684e4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#d405792e_d055_4188_88ec_7b12f44421d8
stoichiometry: 1.0
species: meta s 0467
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_357bc137_4991_4c56_8d63_e8d4008b9898
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#a18641b4_c69b_41a8_9a48_919e5342dbe8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_87561129_5910_4bbd_8a3f_5122e28c713a
exponent: 2.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

http://identifiers.org/biomodels.db/BIOMD0000000470#_72cc3624_f472_45ff_8d65_1037a2ab9e29
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta s 1216
name: Malonyl-[acyl-carrier protein]
is: CHEBI:17330
has only substance units: false
in compartment: meta cell
is: SBO:0000247
boundary condition: false
is: C01209
initial amount: NaN
initial concentration: 0.1
type: Species
constant: false
notes: iJO1366:M_malACP_c

http://identifiers.org/biomodels.db/BIOMD0000000470#f5610ced_fb4c_42f1_8b6a_1c1ce4abee62
stoichiometry: 0.02702
species: meta s 0731
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_95f2d7b1_d746_4eaa_ba8a_ad1b57e64f7e
stoichiometry: 1.0
species: meta s 0543
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_5bc8dd9f_e3df_4e83_886d_c29104a26506
stoichiometry: 1.0
species: meta s 0028
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_98007e74_298c_42a0_afec_8f8b71fac224
is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 0419
name: CDP-diacylglycerol synthetase (n-C16:1)
is: SBO:0000176
is: http://identifiers.org/ec-code/2.7.7.41
reversible: true
type: Reaction
fast: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_5cafa7dd_bb2b_4fa5_8a80_d48d549636b6
stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_1002288f_5c59_4647_a756_e8bb95c36f6d
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_306915e1_1321_493b_a05d_97372e1cb9be
stoichiometry: 1.0
species: meta s 0046
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#a0ff0b04_df7b_4ce0_b7ef_576c09d6a22a
is: SBO:0000324
value: 0.231095778642549
type: LocalParameter

meta r 0950
reversible: true
is: SBO:0000176
type: Reaction
fast: false
is: http://identifiers.org/ec-code/3.5.4.9
name: methenyltetrahydrofolate cyclohydrolase

http://identifiers.org/biomodels.db/BIOMD0000000470#_1df8d07b_88e2_4ec0_90f3_c0805fee537e
is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 1217
is: CHEBI:57384
has only substance units: false
in compartment: meta cell
type: Species
name: Malonyl-CoA
is: SBO:0000247
notes: iJO1366:M_malcoa_c
is: C00083
initial amount: NaN
initial concentration: 0.1
constant: false
boundary condition: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_24093f14_1c57_4bf6_a58e_d50b409374f3
is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 0603
is: SBO:0000247
in compartment: meta cell
is: C00993
initial amount: NaN
name: D-Alanyl-D-alanine
has only substance units: false
type: Species
boundary condition: false
initial concentration: 0.1
notes: iJO1366:M_alaala_c
is: CHEBI:16576
constant: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_3fdcb9ff_212e_41b3_8bad_02c2b7531163
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#d82a6a0d_e7c8_44c5_b3c6_875063970615
units: dimensionless
value: 0.0385159631070915
type: LocalParameter

meta s 1362
is: CHEBI:58452
type: Species
constant: false
in compartment: meta cell
is: SBO:0000247
initial concentration: 0.1
initial amount: NaN
is: C06055
has only substance units: false
boundary condition: false
name: O-Phospho-4-hydroxy-L-threonine
notes: iJO1366:M_phthr_c

http://identifiers.org/biomodels.db/BIOMD0000000470#_945eb61f_484e_4585_8eee_a18a8be5b01b
stoichiometry: 1.0
species: meta s 1170
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_70dc4133_437f_4768_967f_ea076b6d29be
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 0726
fast: false
is: SBO:0000176
name: glycine hydroxymethyltransferase, reversible
reversible: true
is: http://identifiers.org/ec-code/2.1.2.1
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000470#_381e090a_4f69_46b7_ac44_3c763c0f355c
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#f9a5e6d3_156a_4b26_a49a_17366b764dcb
is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0860
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meta s 1363
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is: C01102
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initial amount: NaN
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type: Species
constant: false
notes: iJO1366:M_phom_c
name: O-Phospho-L-homoserine
boundary condition: false

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is: SBO:0000322
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is: SBO:0000281
value: 0.2
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is: SBO:0000281
units: dimensionless
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is: SBO:0000281
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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta r 0096
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reversible: true
is: SBO:0000176
is: http://identifiers.org/ec-code/5.3.3.8
fast: false
type: Reaction

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stoichiometry: 1.0
species: meta s 1484
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stoichiometry: 1.0
species: meta s 0555
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meta s 1364
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is: C01005
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initial amount: NaN
initial concentration: 0.1
boundary condition: false
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constant: false
notes: iJO1366:M_pser_DASH_L_c

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stoichiometry: 1.0
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value: 0.1
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is: SBO:0000324
value: 1.27435395226989E-5
type: LocalParameter

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stoichiometry: 1.0
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type: LocalParameter

meta r 0724
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is: SBO:0000176
reversible: true
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stoichiometry: 1.0
species: meta s 0896
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stoichiometry: 1.0
species: meta s 0467
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value: 2.0
type: LocalParameter

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stoichiometry: 1.0
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meta s 0826
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type: Species
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is: CHEBI:175763
is: C00448
boundary condition: false
constant: false
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has only substance units: false

meta r 0085
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type: Reaction

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stoichiometry: 0.2411
species: meta s 1072
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meta r 1389
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is: http://identifiers.org/ec-code/2.5.1.7
type: Reaction
reversible: true
is: SBO:0000176
name: UDP-N-acetylglucosamine 1-carboxyvinyltransferase

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stoichiometry: 1.0
species: meta s 0451
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species: meta s 1413
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stoichiometry: 1.0
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units: dimensionless
value: 0.0213211883092039
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is: SBO:0000323
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meta e 0012
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is: SBO:0000252
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initial concentration: 0.001
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boundary condition: true
type: Species

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stoichiometry: 1.0
species: meta s 1095
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meta r 1388
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is: http://identifiers.org/ec-code/1.1.1.158
is: SBO:0000176
fast: false

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stoichiometry: 1.0
species: meta s 0308
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stoichiometry: 1.0
species: meta s 1318
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stoichiometry: 1.0
species: meta s 0325
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meta e 0719
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is: SBO:0000252
boundary condition: true
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is: SBO:0000324
value: 0.0507497610701493
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meta e 0416
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in compartment: meta cell
has only substance units: false
type: Species
initial amount: NaN
is: P0A9Q7
boundary condition: true
is encoded by: eco:b1241
initial concentration: 0.001

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is: SBO:0000323
value: 0.1
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stoichiometry: 1.0
species: meta s 0099
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is: SBO:0000323
value: 0.1
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units: dimensionless
value: 7.20979601425486E-4
type: LocalParameter

meta r 1230
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fast: false
type: Reaction
is: SBO:0000176
name: protoporphyrinogen oxidase (aerobic)
reversible: true

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0920
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is: SBO:0000324
value: 4.32449244111493E-4
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0467
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value: 0.0614208132382202
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value: 0.1
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is: SBO:0000323
value: 0.1
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stoichiometry: 1.0
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is: SBO:0000323
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meta s 1372
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is: SBO:0000247
boundary condition: false
initial concentration: 0.1
initial amount: NaN
is: CHEBI:15379
type: Species
is: C00007
notes: iJO1366:M_o2_c

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is: SBO:0000323
value: 0.1
type: LocalParameter

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units: dimensionless
value: 0.0492981056959303
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is: SBO:0000322
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meta e 0167
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name: adk
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boundary condition: true
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is: SBO:0000322
value: 0.1
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stoichiometry: 0.09474
species: meta s 1106
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stoichiometry: 1.0
species: meta s 0395
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stoichiometry: 1.0
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meta e 0717
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stoichiometry: 1.0
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meta r 0632
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type: Reaction

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stoichiometry: 1.0
species: meta s 1334
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stoichiometry: 0.005205
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meta r 0731
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meta e 0162
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stoichiometry: 1.0
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meta e 0168
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meta r 1232
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units: dimensionless
value: 0.0613899240064973
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notes: iJO1366:M_5drib_c
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meta e 0436
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constant: true
is: P0AEK4

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meta e 0010
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meta e 0439
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is: P78061
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is: SBO:0000322
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meta s 0512
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stoichiometry: 1.0
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meta s 1336
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reversible: true
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meta s 1334
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units: dimensionless
value: 3.30916477964549E-4
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stoichiometry: 1.0
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is: SBO:0000247
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notes: iJO1366:M_nadp_c
is: C00006
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units: dimensionless
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meta r 0848
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value: 4.32449244121061E-4
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stoichiometry: 3.23E-4
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meta r 0507
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type: Reaction
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stoichiometry: 1.0
species: meta s 1083
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meta s 0510
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constant: false
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is: CHEBI:58069
is: C00112
name: CDP
notes: iJO1366:M_cdp_c
type: Species
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initial concentration: 0.1

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stoichiometry: 1.0
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meta r 0847
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is: SBO:0000176
is: http://identifiers.org/ec-code/4.3.1.19
fast: false

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stoichiometry: 2.0
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value: 0.1
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units: dimensionless
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units: dimensionless
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meta s 0805
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meta e 0580
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has only substance units: false
type: Species
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meta e 0720
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initial amount: NaN
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value: 0.115439846268656
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stoichiometry: 0.7739
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type: Reaction
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reversible: true
is: http://identifiers.org/ec-code/4.1.1.65
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is: http://identifiers.org/ec-code/4.1.1.65
is: SBO:0000176
type: Reaction
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meta e 0727
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meta s 1072
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constant: false
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meta e 0579
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stoichiometry: 1.0
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meta e 0728
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meta r 0622
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is: SBO:0000323
value: 0.1
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meta s 0810
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meta e 0729
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meta r 1266
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meta r 1379
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type: Reaction

meta r 0099
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type: Reaction

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stoichiometry: 1.0
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meta r 1265
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reversible: true
name: riboflavin synthase
is: SBO:0000176
is: http://identifiers.org/ec-code/2.5.1.9

meta e 0405
has only substance units: false
is: SBO:0000252
is encoded by: eco:b1210
initial amount: NaN
boundary condition: true
constant: true
is: P0A6X1
name: hemA
initial concentration: 0.001
in compartment: meta cell
type: Species

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.0346319538813664
type: LocalParameter

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units: dimensionless
value: 2.23E-4
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 1264
fast: false
is: SBO:0000176
type: Reaction
reversible: true
is: http://identifiers.org/ec-code/2.7.1.26
name: riboflavin kinase

http://identifiers.org/biomodels.db/BIOMD0000000470#_36e03be5_3148_4266_b47f_cfe22b1646a0
stoichiometry: 1.0
type: SpeciesReference

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is: SBO:0000323
value: 0.1
type: LocalParameter

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value: 0.1
type: LocalParameter

meta e 0406
boundary condition: true
type: Species
initial concentration: 0.001
in compartment: meta cell
is: SBO:0000252
initial amount: NaN
constant: true
is encoded by: eco:b1215
has only substance units: false
name: kdsA
is: P0A715

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is: SBO:0000324
value: 9.26676951688061E-4
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1484
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stoichiometry: 1.0
species: meta s 0467
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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0555
type: SpeciesReference

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units: dimensionless
value: 9.26676951688061E-5
type: LocalParameter

meta r 0098
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type: Reaction
is: http://identifiers.org/ec-code/4.2.1.10
name: 3-dehydroquinate dehydratase, irreversible
is: SBO:0000176
reversible: true

meta r 1376
type: Reaction
fast: false
reversible: true
is: http://identifiers.org/ec-code/2.6.1.5
is: SBO:0000176
name: tyrosine transaminase

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is: SBO:0000324
value: 0.295788634175582
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 3.87846855703637E-5
type: LocalParameter

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stoichiometry: 0.2158
species: meta s 1170
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0336
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 1336
type: SpeciesReference

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is: SBO:0000324
value: 0.131230753965474
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 0134
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initial amount: NaN
boundary condition: true
type: Species
is: SBO:0000252
initial concentration: 0.001
name: hemB
is encoded by: eco:b0369
has only substance units: false
constant: true

meta r 1375
name: tyrosine lyase
fast: false
reversible: true
is: SBO:0000176
type: Reaction

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is: SBO:0000324
value: 0.00992749433893647
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0201
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0467
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0805
type: SpeciesReference

meta r 0517
reversible: true
is: SBO:0000176
name: dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)
is: http://identifiers.org/ec-code/4.2.1.9
type: Reaction
fast: false

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stoichiometry: 1.0
species: meta s 0233
type: SpeciesReference

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1095
type: SpeciesReference

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0293
type: SpeciesReference

meta r 0854
is: SBO:0000176
reversible: true
fast: false
type: Reaction
name: leucine transaminase (irreversible)
is: http://identifiers.org/ec-code/2.6.1.42

meta e 0022
name: pdxA
type: Species
constant: true
initial amount: NaN
in compartment: meta cell
is: SBO:0000252
is: P19624
is encoded by: eco:b0052
has only substance units: false
initial concentration: 0.001
boundary condition: true

meta e 0135
boundary condition: true
constant: true
is: P0A6J8
type: Species
is: SBO:0000252
is encoded by: eco:b0381
initial concentration: 0.001
has only substance units: false
name: ddlA
in compartment: meta cell
initial amount: NaN

http://identifiers.org/biomodels.db/BIOMD0000000470#acc36018_cadf_48cc_9f6e_515fdfd640be
is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.0362498293355932
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_37eb0039_eade_4952_b630_043fb71c2012
stoichiometry: 1.0
species: meta s 1264
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_4bb8ef67_720f_46c8_8791_b8980067a01c
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#bd056e8f_1971_4576_b4fc_2493508c72c9
stoichiometry: 0.2411
species: meta s 1068
type: SpeciesReference

meta r 0515
reversible: true
name: dihydropteroate synthase
is: SBO:0000176
type: Reaction
fast: false
is: http://identifiers.org/ec-code/2.5.1.15

http://identifiers.org/biomodels.db/BIOMD0000000470#_5b3f1cf2_03ce_40c4_b12f_f8b2afa63bb3
units: dimensionless
value: 0.00384799487562186
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#f163d71a_3538_4cb6_a5ba_cca1531e0e03
is: SBO:0000323
value: 0.1
type: LocalParameter

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units: dimensionless
value: 0.121101856295072
type: LocalParameter

meta e 0020
type: Species
constant: true
in compartment: meta cell
is: SBO:0000252
initial concentration: 0.001
has only substance units: false
boundary condition: true
name: folA
initial amount: NaN
is encoded by: eco:b0048
is: P0ABQ4

http://identifiers.org/biomodels.db/BIOMD0000000470#bf6f9cd8_1a2d_4dc2_a366_fb67c5ccf1bf
is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_5b2e95c1_9424_49eb_a5fd_9087ae1eeb00
stoichiometry: 1.0
species: meta s 0454
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_35a4d578_13b3_49d1_a96d_cee638ecd3d2
is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 0512
is: http://identifiers.org/ec-code/1.3.3.1
name: dihydroorotic acid (menaquinone-8)
reversible: true
is: SBO:0000176
type: Reaction
fast: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_275fd571_2d90_432c_9da8_de36273d9a6a
stoichiometry: 1.0
species: meta s 0217
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_6a3b6a87_0cfb_46f4_b68a_13d7ee144dfd
stoichiometry: 1.0
species: meta s 0267
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#f31558b0_d239_4f37_a2bf_014fa43fb816
units: dimensionless
value: 0.0385159631070916
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#d005042a_b518_4a30_8509_9dbaee231c8d
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0073
type: SpeciesReference

meta e 0138
in compartment: meta cell
is: P0A6E1
boundary condition: true
initial concentration: 0.001
type: Species
name: aroL
is: SBO:0000252
is encoded by: eco:b0388
has only substance units: false
initial amount: NaN
constant: true

http://identifiers.org/biomodels.db/BIOMD0000000470#b6eaacbf_51f3_40e7_9dab_30bf427f8d1c
units: dimensionless
value: 6.20554969142397E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_1547890b_5f14_4fca_a645_dfa03dd0ca55
stoichiometry: 1.0
species: meta s 0360
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_66bea663_3da5_44e1_96e6_e7787caea890
is: SBO:0000324
value: 1.15430611819642E-5
type: LocalParameter

meta s 1690
notes: iJO1366:M_trnaglu_c
is: SBO:0000247
type: Species
has only substance units: false
is: CHEBI:29175
name: tRNA (Glu)
boundary condition: false
is: C01641
initial amount: NaN
constant: false
initial concentration: 0.1
in compartment: meta cell

meta s 1075
constant: false
type: Species
initial amount: NaN
boundary condition: false
notes: iJO1366:M_aspsa_c
in compartment: meta cell
is: SBO:0000247
is: CHEBI:18051
has only substance units: false
initial concentration: 0.1
is: C00441
name: L-Aspartate 4-semialdehyde

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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ee4a7068_af75_4e25_80f7_143d90faa18e
stoichiometry: 8.0
species: meta s 1028
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_8e87ae01_145d_4f4f_9acc_84daa2120cd0
stoichiometry: 1.0
species: meta s 0307
type: SpeciesReference

meta e 0139
initial concentration: 0.001
is encoded by: eco:b0394
constant: true
is: P23917
type: Species
is: SBO:0000252
has only substance units: false
initial amount: NaN
name: mak
in compartment: meta cell
boundary condition: true

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0467
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stoichiometry: 1.0
species: meta s 1430
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stoichiometry: 1.0
species: meta s 0049
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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 1333
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stoichiometry: 1.0
species: meta s 0361
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stoichiometry: 1.0
species: meta s 1239
type: SpeciesReference

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is: SBO:0000324
value: 0.690173479743227
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000322
value: 0.1
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units: dimensionless
value: 0.0513869380474194
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stoichiometry: 1.0
species: meta s 1632
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is: SBO:0000324
value: 0.00142090465922348
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 0511
fast: false
reversible: true
is: SBO:0000176
is: http://identifiers.org/ec-code/3.5.2.3
type: Reaction
name: dihydroorotase

http://identifiers.org/biomodels.db/BIOMD0000000470#cd1677b8_b385_47c8_8f45_a6e990908e35
units: dimensionless
value: 0.0624017887496972
type: LocalParameter

meta e 0839
constant: true
boundary condition: true
initial amount: NaN
is: SBO:0000252
is encoded by: eco:b2687
in compartment: meta cell
initial concentration: 0.001
has only substance units: false
is: P45578
name: luxS
type: Species

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is: SBO:0000324
value: 1.58233967969303
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 0137
constant: true
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type: Species
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is encoded by: eco:b0386
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initial amount: NaN
boundary condition: true
initial concentration: 0.001

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 4.73173163971078E-4
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 0526
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constant: false
is: SBO:0000247
is: C00251
is: CHEBI:29748
initial concentration: 0.1
boundary condition: false
type: Species
name: chorismate
initial amount: NaN
notes: iJO1366:M_chor_c
in compartment: meta cell

meta r 1130
fast: false
name: Phosphatidylserine syntase (n-C16:0)
is: SBO:0000176
is: http://identifiers.org/ec-code/2.7.8.8
type: Reaction
reversible: true

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is: SBO:0000323
value: 0.1
type: LocalParameter

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units: dimensionless
value: 0.0807006804356794
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#c77abb51_b78f_46ba_8979_faeb2a197ff1
stoichiometry: 1.0
species: meta s 0467
type: SpeciesReference

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is: SBO:0000324
value: 0.690173479743227
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 1.0
type: LocalParameter

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value: 0.1
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is: SBO:0000281
value: 0.2
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stoichiometry: 2.0
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0766
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stoichiometry: 1.0
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stoichiometry: 1.0
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meta r 1131
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is: SBO:0000176
is: http://identifiers.org/ec-code/2.7.8.8
type: Reaction
reversible: true

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stoichiometry: 1.0
species: meta s 0783
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stoichiometry: 1.0
species: meta s 0859
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meta e 0466
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type: Species
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boundary condition: true
initial concentration: 0.001
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initial amount: NaN
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constant: true

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stoichiometry: 1.0
species: meta s 0467
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value: 0.1
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meta s 0738
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is: SBO:0000247
initial concentration: 0.1
boundary condition: false
name: dehydroglycine
notes: iJO1366:M_dhgly_c
type: Species
initial amount: NaN
is: C15809
is: CHEBI:53664
constant: false
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units: dimensionless
value: 0.0383041017619642
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is: SBO:0000281
value: 20.0
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value: 0.1
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units: dimensionless
value: 0.148949399052035
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meta r 1581
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is: SBO:0000176
fast: false
type: Reaction

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stoichiometry: 1.0
species: meta s 1399
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stoichiometry: 1.0
species: meta s 0376
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is: SBO:0000322
value: 0.1
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stoichiometry: 1.0
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units: dimensionless
value: 0.00884013797559913
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species: meta s 1390
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value: 0.00362498293358012
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meta s 0522
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is: C00698
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notes: iJO1366:M_cl_e
boundary condition: true
constant: true
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units: dimensionless
value: 0.00539107129442425
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meta s 0737
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boundary condition: false
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type: Species
constant: false
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name: Decanoyl-CoA (n-C10:0CoA)
initial concentration: 0.1
is: SBO:0000247
is: CHEBI:61430
is: C05274

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units: dimensionless
value: 0.00787329117099325
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value: 3.70670780672502E-4
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units: dimensionless
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stoichiometry: 1.0
species: meta s 1546
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is: SBO:0000323
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meta s 0520
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is: SBO:0000247
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has only substance units: false
initial amount: NaN
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value: 3.84581600739143
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is: SBO:0000324
value: 0.150949996243883
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is: SBO:0000322
value: 0.1
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stoichiometry: 1.0
species: meta s 0233
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meta r 0857
is: SBO:0000176
is: http://identifiers.org/ec-code/2.4.1.182
name: Lipid A disaccaride synthase
type: Reaction
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stoichiometry: 1.0
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is: SBO:0000322
value: 0.1
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stoichiometry: 1.0
species: meta s 1061
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is: SBO:0000324
value: 0.00111201234202558
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units: dimensionless
value: 1.17502637474065
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value: 2.0E-4
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is: SBO:0000281
value: 20.0
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units: dimensionless
value: 7.09E-4
type: LocalParameter

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is: SBO:0000322
value: 0.1
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value: 0.0131230753965474
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meta e 0734
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constant: true
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is: SBO:0000323
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stoichiometry: 1.0
species: meta s 0454
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is: SBO:0000281
value: 0.2
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stoichiometry: 1.0
species: meta s 0467
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value: 0.0520471088024868
type: LocalParameter

meta s 0732
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type: Species
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notes: iJO1366:M_dnad_c
is: SBO:0000247
constant: false
is: C00857
initial amount: NaN
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initial concentration: 0.1

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is: SBO:0000323
value: 0.1
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is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 1139
type: Reaction
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is: SBO:0000176
reversible: true
is: http://identifiers.org/ec-code/1.8.4.8

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stoichiometry: 2.0
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is: SBO:0000323
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meta e 0732
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is: SBO:0000252
in compartment: meta cell
initial concentration: 0.001
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name: fabB
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type: Species

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is: SBO:0000281
value: 0.2
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units: dimensionless
value: 0.00269553564721213
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units: dimensionless
value: 0.0513869380474194
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stoichiometry: 1.0
species: meta s 1430
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stoichiometry: 1.0
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stoichiometry: 1.0
species: meta s 0342
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meta s 1340
notes: iJO1366:M_nicrnt_c
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boundary condition: false
is: C01185
type: Species
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is: SBO:0000247
constant: false
initial amount: NaN
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is: CHEBI:57502
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is: SBO:0000323
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value: 0.1
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value: 0.1
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meta e 0731
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boundary condition: true
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is: SBO:0000323
value: 0.1
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value: 0.1
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is: SBO:0000322
value: 0.1
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meta s 0731
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initial amount: NaN
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notes: iJO1366:M_dctp_c
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type: Species
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is: C00458
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constant: false

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value: 0.1
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stoichiometry: 1.0
species: meta s 1792
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meta e 0730
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value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1531
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value: 0.690173479743024
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stoichiometry: 1.0
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meta r 1582
is: SBO:0000176
type: Reaction
name: cytochrome oxidase bd (ubiquinol-8: 2 protons) (periplasm)
fast: false
reversible: true

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is: SBO:0000324
value: 0.107821425888423
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.00111699894445653
type: LocalParameter

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is: SBO:0000324
value: 1.49136350470978E-4
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 0707
type: Reaction
fast: false
name: glycerol-3-phosphate acyltransferase (C16:1)
reversible: true
is: http://identifiers.org/ec-code/2.3.1.15
is: SBO:0000176

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units: dimensionless
value: 0.005205
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.563347557924554
type: LocalParameter

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stoichiometry: 53.95
species: meta s 1430
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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1109
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0218
type: SpeciesReference

meta e 0572
is: P05041
has only substance units: false
in compartment: meta cell
initial amount: NaN
constant: true
is encoded by: eco:b1812
initial concentration: 0.001
name: pabB
boundary condition: true
type: Species
is: SBO:0000252

meta r 0706
type: Reaction
reversible: true
is: http://identifiers.org/ec-code/2.3.1.15
name: glycerol-3-phosphate acyltransferase (C16:0)
is: SBO:0000176
fast: false

meta e 0736
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has only substance units: false
constant: true
initial concentration: 0.001
boundary condition: true
is: SBO:0000252
type: Species
name: fadI
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initial amount: NaN

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stoichiometry: 1.0
species: meta s 1745
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0073
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0510
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units: dimensionless
value: 2.0
type: LocalParameter

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units: dimensionless
value: 0.00539107129442425
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0270
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0451
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stoichiometry: 2.0
species: meta s 0395
type: SpeciesReference

meta s 1239
boundary condition: false
initial amount: NaN
initial concentration: 0.1
type: Species
notes: iJO1366:M_mql8_c
is: CHEBI:18151
has only substance units: false
name: Menaquinol 8
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is: SBO:0000247
constant: false
is: C05819

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stoichiometry: 1.0
species: meta s 1277
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is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 0735
boundary condition: true
is: P77399
is: SBO:0000252
in compartment: meta cell
type: Species
constant: true
is encoded by: eco:b2341
initial amount: NaN
name: fadJ
has only substance units: false
initial concentration: 0.001

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stoichiometry: 1.0
species: meta s 0991
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stoichiometry: 1.0
species: meta s 0421
type: SpeciesReference

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units: dimensionless
value: 0.1379
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0306
type: SpeciesReference

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is: SBO:0000324
value: 0.0538719282586744
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 1137
is: http://identifiers.org/ec-code/2.7.8.13
is: SBO:0000176
type: Reaction
reversible: true
name: phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)
fast: false

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#c1633e0e_7f8d_4c19_9739_ae827941205f
stoichiometry: 1.0
species: meta s 0051
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0337
type: SpeciesReference

meta e 0039
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boundary condition: true
is encoded by: eco:b0087
is: P0A6W3
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initial concentration: 0.001
initial amount: NaN
type: Species
is: SBO:0000252

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is: SBO:0000323
value: 0.1
type: LocalParameter

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units: dimensionless
value: 7.97856388884133E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_1e4269a9_6e88_4130_94a9_3d6b4a4ce00e
stoichiometry: 1.0
species: meta s 0421
type: SpeciesReference

meta r 1368
is: SBO:0000176
type: Reaction
name: Tryptophanase (L-tryptophan)
is: http://identifiers.org/ec-code/4.1.99.1
fast: false
reversible: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_24d1e13f_c69b_43a1_9fa8_d911df0f08db
stoichiometry: 1.0
species: meta s 1333
type: SpeciesReference

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units: dimensionless
value: 7.97856388884133E-5
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_27c643af_f4d4_4cad_89ce_48529bb3816b
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_7c178ceb_1465_4627_bbd3_f140219bd4eb
stoichiometry: 1.0
species: meta s 1109
type: SpeciesReference

meta r 1250
is: http://identifiers.org/ec-code/1.5.1.2
name: pyrroline-5-carboxylate reductase
fast: false
is: SBO:0000176
reversible: true
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000470#e3a4eb1f_1482_48f5_95f7_6e29d5e23d69
fast: false
is: SBO:0000185
type: Reaction
name: D-glucose transport via diffusion (extracellular to periplasm) irreversible
reversible: true

http://identifiers.org/biomodels.db/BIOMD0000000470#aff493ed_b937_463a_9775_a6f2020c3634
units: dimensionless
value: 9.26676951688061E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_7df4d28e_1e96_4542_a8e9_98f14d37bfaa
stoichiometry: 1.0
species: meta s 1316
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#dcad077b_8b82_4025_93a8_0a9c895e5503
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1574
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#ffc60d13_6139_4071_8133_48481e4882fc
is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 3.72332981485438E-4
type: LocalParameter

meta e 0567
is encoded by: eco:b1779
name: gapA
in compartment: meta cell
boundary condition: true
is: SBO:0000252
is: P0A9B2
constant: true
has only substance units: false
initial concentration: 0.001
initial amount: NaN
type: Species

http://identifiers.org/biomodels.db/BIOMD0000000470#_35ee2294_43f0_4914_a301_c9d875221013
is: SBO:0000281
value: 200.0
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1170
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_1d1d1989_97f8_411e_a848_47be5df637e6
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#dc45d3d6_82a0_45c0_8019_4416bf9175ec
is: SBO:0000324
value: 0.00350031787280963
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e0eae66d_9efb_44f7_a1c0_0eb181fac297
is: SBO:0000281
value: 0.2
type: LocalParameter

meta s 1083
has only substance units: false
is: C00097
boundary condition: false
in compartment: meta cell
is: SBO:0000247
initial concentration: 0.1
constant: false
type: Species
name: L-Cysteine
is: CHEBI:17561
initial amount: NaN
notes: iJO1366:M_cys_DASH_L_c

meta e 0035
name: ilvH
constant: true
initial concentration: 0.001
initial amount: NaN
is: P00894
is encoded by: eco:b0078
has only substance units: false
boundary condition: true
in compartment: meta cell
type: Species
is: SBO:0000252

meta s 0802
boundary condition: false
initial amount: NaN
has only substance units: false
in compartment: meta cell
name: dTMP
constant: false
notes: iJO1366:M_dtmp_c
type: Species
is: C00364
is: SBO:0000247
is: CHEBI:26999
initial concentration: 0.1

http://identifiers.org/biomodels.db/BIOMD0000000470#_6e8045eb_eff6_4175_89c8_efd082ddc34e
stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_99bee75b_0b63_4f80_8c4b_12dfde3ff20e
stoichiometry: 1.0
species: meta s 0783
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#ec947fdd_8fd0_4bfc_bbe0_d158437da1e8
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1334
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0467
type: SpeciesReference

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 1082
constant: false
has only substance units: false
type: Species
in compartment: meta cell
notes: iJO1366:M_cyst_DASH_L_c
is: CHEBI:17482
initial concentration: 0.1
initial amount: NaN
is: SBO:0000247
name: L-Cystathionine
boundary condition: false
is: C02291

meta r 0611
fast: false
type: Reaction
reversible: true
name: FMN adenylyltransferase
is: http://identifiers.org/ec-code/2.7.7.2
is: SBO:0000176

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stoichiometry: 1.0
species: meta s 1552
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_6d90440f_afff_40bd_bc00_ff23b8a0f820
stoichiometry: 0.1537
species: meta s 1141
type: SpeciesReference

meta r 0925
is: http://identifiers.org/ec-code/1.1.1.37
is: SBO:0000176
reversible: true
name: malate dehydrogenase
fast: false
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000470#ae98dee8_d95e_4de4_b005_e0d87aee7ac4
stoichiometry: 1.0
species: meta s 1095
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meta e 0036
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boundary condition: true
constant: true
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type: Species
is: SBO:0000252
is: P0AD68
is encoded by: eco:b0084
initial concentration: 0.001
name: ftsI
initial amount: NaN

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stoichiometry: 1.0
species: meta s 0991
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#c494ca3d_4dc5_44d2_9d85_9bf1230d5d95
stoichiometry: 1.0
species: meta s 0913
type: SpeciesReference

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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units: dimensionless
value: 0.0402391112803253
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 1081
is: C00327
constant: false
has only substance units: false
name: L-Citrulline
type: Species
is: CHEBI:16349
boundary condition: false
notes: iJO1366:M_citr_DASH_L_c
in compartment: meta cell
initial concentration: 0.1
initial amount: NaN
is: SBO:0000247

http://identifiers.org/biomodels.db/BIOMD0000000470#_8f8e41d5_c007_4868_b848_b29fc19967e8
units: dimensionless
value: 0.0130870610456636
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0875
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is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_07fe1be7_7eef_48ef_8645_0355bcc98163
stoichiometry: 1.0
species: meta s 1334
type: SpeciesReference

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_94663428_0f0c_4b54_b2fc_16cbd36fa9d8
units: dimensionless
value: 0.06382
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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units: dimensionless
value: 0.0271110954535792
type: LocalParameter

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units: dimensionless
value: 0.101534797735323
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_1814400d_3ad6_44c3_9b2e_ddcb16b23c17
is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 0037
initial amount: NaN
is: SBO:0000252
has only substance units: false
type: Species
boundary condition: true
is: P22188
is encoded by: eco:b0085
constant: true
in compartment: meta cell
initial concentration: 0.001
name: murE

meta r 1367
reversible: true
name: tryptophan synthase (indoleglycerol phosphate)
is: SBO:0000176
is: http://identifiers.org/ec-code/4.2.1.20
is described by: http://identifiers.org/isbn/1555810845
type: Reaction
fast: false

http://identifiers.org/biomodels.db/BIOMD0000000470#ad328589_0c88_42ac_929d_1be40db2e551
is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000281
value: 20.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#e7ea14c1_6f91_40de_a887_9400fc955840
stoichiometry: 1.0
species: meta s 1335
type: SpeciesReference

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0810
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units: dimensionless
value: 6.20554969142397E-5
type: LocalParameter

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units: dimensionless
value: 2.50022705200688E-4
type: LocalParameter

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units: dimensionless
value: 2.23E-4
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1776
type: SpeciesReference

meta e 0038
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is: P11880
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constant: true
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type: Species
boundary condition: true

http://identifiers.org/biomodels.db/BIOMD0000000470#bd522d12_0d9f_41df_a40d_18811a3d804a
stoichiometry: 1.0
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stoichiometry: 1.0
species: meta s 1333
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stoichiometry: 1.0
species: meta s 0075
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stoichiometry: 1.0
species: meta s 1335
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value: 0.1
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is: SBO:0000323
value: 0.1
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units: dimensionless
value: 0.0221586919261637
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is: SBO:0000324
value: 1.84262439714743
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units: dimensionless
value: 7.97856388884133E-5
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0772
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stoichiometry: 53.95
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units: dimensionless
value: 0.0409732499715063
type: LocalParameter

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value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_49088d98_4914_4328_9eb7_0ba7e2722300
stoichiometry: 1.0
species: meta s 1412
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units: dimensionless
value: 3.08892317229363E-5
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 0502
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is: SBO:0000176
reversible: true
type: Reaction
is: http://identifiers.org/ec-code/1.3.1.26
fast: false

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

meta r 0928
name: malate oxidase
fast: false
type: Reaction
reversible: true
is: SBO:0000176
is: http://identifiers.org/ec-code/1.1.3.3

meta e 0031
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is: SBO:0000252
has only substance units: false
is encoded by: eco:b0072
boundary condition: true
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constant: true

meta e 1298
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initial concentration: 0.001
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is encoded by: eco:b4122
initial amount: NaN
is: SBO:0000252
type: Species
constant: true
name: fumB
boundary condition: true

http://identifiers.org/biomodels.db/BIOMD0000000470#d3d743a7_0082_4701_91e6_bc8e628140d3
is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 0144
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boundary condition: true
is encoded by: eco:b0414
name: ribD
type: Species
initial amount: NaN
initial concentration: 0.001
has only substance units: false
is: SBO:0000252
constant: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_91e01037_4b83_4ab2_a3b5_a091bbcb39b0
stoichiometry: 1.0
species: meta s 0499
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stoichiometry: 1.0
species: meta s 0232
type: SpeciesReference

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is: SBO:0000281
value: 0.2
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0454
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stoichiometry: 1.0
species: meta s 0971
type: SpeciesReference

meta r 0503
is: SBO:0000176
fast: false
reversible: true
type: Reaction
name: dihydrodipicolinate synthase
is: http://identifiers.org/ec-code/4.2.1.52

http://identifiers.org/biomodels.db/BIOMD0000000470#_49016b65_f678_453f_aee7_2033664fefed
is: SBO:0000324
value: 0.14584981009125
type: LocalParameter

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stoichiometry: 2.23E-4
species: meta s 0337
type: SpeciesReference

meta s 0308
constant: false
is: SBO:0000247
in compartment: meta cell
boundary condition: false
is: C03232
initial amount: NaN
initial concentration: 0.1
is: CHEBI:30933
notes: iJO1366:M_3php_c
name: 3-Phosphohydroxypyruvate
has only substance units: false
type: Species

http://identifiers.org/biomodels.db/BIOMD0000000470#_485f9b66_70ee_42d8_b885_a73aacabff3d
stoichiometry: 1.0
species: meta s 1193
type: SpeciesReference

meta e 0032
initial concentration: 0.001
constant: true
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is: P30125
is: SBO:0000252
name: leuB
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boundary condition: true
is encoded by: eco:b0073
initial amount: NaN
type: Species

meta e 0145
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is encoded by: eco:b0415
is: P61714
in compartment: meta cell
type: Species
boundary condition: true
initial amount: NaN
constant: true
name: ribH
initial concentration: 0.001
is: SBO:0000252

http://identifiers.org/biomodels.db/BIOMD0000000470#_7a302b92_cdc0_4ff7_be41_3fec70c337fd
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_255cb446_0e20_4207_b9b5_5dfbf5e5e075
value: 0.1
type: LocalParameter

meta r 1255
type: Reaction
is: http://identifiers.org/ec-code/1.2.7.1
reversible: true
name: pyruvate synthase
is: SBO:0000176
fast: false

meta s 1240
type: Species
initial amount: NaN
boundary condition: false
is: C00828
notes: iJO1366:M_mqn8_c
has only substance units: false
name: Menaquinone 8
in compartment: meta cell
constant: false
is: SBO:0000247
initial concentration: 0.1

http://identifiers.org/biomodels.db/BIOMD0000000470#_4d6b0261_061b_466b_aea2_10894bc9394a
stoichiometry: 1.0
species: meta s 0421
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_4305f676_f367_4438_82ea_5644f4ccd62a
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 0504
reversible: true
is: SBO:0000176
fast: false
is: http://identifiers.org/ec-code/1.5.1.3
type: Reaction
name: dihydrofolate reductase

http://identifiers.org/biomodels.db/BIOMD0000000470#_56ec01a8_28e0_4124_889a_edd8c08ef444
is: SBO:0000324
value: 0.480709028377728
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_7e5f220b_2914_4ce0_a950_1128923ff8bf
units: dimensionless
value: 0.87986351299775
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_9dee8caf_be4f_4710_a461_d99df29b9963
is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.00625929418439281
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_846bf99b_c787_4607_984d_96506cda9319
is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 0307
notes: iJO1366:M_13dpg_c
name: 3-Phospho-D-glyceroyl phosphate
type: Species
is: CHEBI:57604
constant: false
is: SBO:0000247
in compartment: meta cell
initial amount: NaN
initial concentration: 0.1
is: C00236
has only substance units: false
boundary condition: false

meta r 1363
name: triose-phosphate isomerase
fast: false
is: SBO:0000176
reversible: true
type: Reaction
is: http://identifiers.org/ec-code/5.3.1.1

meta e 0033
is: SBO:0000252
initial concentration: 0.001
has only substance units: false
constant: true
boundary condition: true
name: leuA
type: Species
is: P09151
initial amount: NaN
in compartment: meta cell
is encoded by: eco:b0074

meta e 0146
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is encoded by: eco:b0417
initial amount: NaN
type: Species
boundary condition: true
initial concentration: 0.001
is: P0AGG0
is: SBO:0000252
name: thiL
has only substance units: false
constant: true

http://identifiers.org/biomodels.db/BIOMD0000000470#_22966082_24ad_4052_b5cb_742bc59b08a5
stoichiometry: 1.0
species: meta s 0233
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_74bca9f3_9f54_4c45_9054_03ca94276883
is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 0505
type: Reaction
name: dihydrofolate synthase
is: http://identifiers.org/ec-code/6.3.2.12
fast: false
reversible: true
is: SBO:0000176

http://identifiers.org/biomodels.db/BIOMD0000000470#_1232dd19_f328_4660_a98d_f3ca8cd42287
units: dimensionless
value: 0.007808
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_7028d147_e1d7_4f7e_842d_d661aba8fbdb
stoichiometry: 1.0
species: meta s 1476
type: SpeciesReference

meta s 0306
notes: iJO1366:M_3pg_c
is: CHEBI:58272
is: C00197
in compartment: meta cell
initial amount: NaN
name: 3-Phospho-D-glycerate
boundary condition: false
type: Species
initial concentration: 0.1
constant: false
is: SBO:0000247
has only substance units: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_331dbaf7_1e7c_4648_9399_c59ead602284
units: dimensionless
value: 3.08892317229362E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_725f89e3_be6e_49fb_81fe_2ce06d7fc745
units: dimensionless
value: 0.0513869380474194
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_3217a907_d3e9_423b_bdc9_ab7493e3585a
stoichiometry: 1.0
species: meta s 0783
type: SpeciesReference

meta e 0034
boundary condition: true
is: P00893
type: Species
is encoded by: eco:b0077
constant: true
initial amount: NaN
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is: SBO:0000252
initial concentration: 0.001
name: ilvI
has only substance units: false

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reversible: true
is: SBO:0000176
fast: false
name: pyruvate dehydrogenase
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000470#_91047e2c_16c2_46cb_8ad1_2a3bb2a0d800
is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000281
value: 0.2
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_7c708ef8_1c18_4cd8_b65a_5d73dec12cd8
is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.374410732498183
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_48feef4a_6963_44f8_9a45_8c344aac543c
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#cab55926_641d_463c_accc_32d10b880730
stoichiometry: 1.0
species: meta s 0049
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#aff01be6_fd9a_42f6_a3b0_6db80d0c79a8
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_9af93028_0309_48b3_9cb7_47c1f5515a82
is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 0305
notes: iJO1366:M_3otdcoa_c
constant: false
name: 3-Oxotetradecanoyl-CoA
has only substance units: false
boundary condition: false
in compartment: meta cell
is: CHEBI:62543
initial amount: NaN
is: SBO:0000247
is: C05261
initial concentration: 0.1
type: Species

http://identifiers.org/biomodels.db/BIOMD0000000470#_89f37dee_4bae_4e68_8730_3ad067597575
stoichiometry: 1.0
species: meta s 1551
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#e8f2f0b9_31e3_48fa_ae57_60cf97e7c0b0
units: dimensionless
value: 0.00120163266904248
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_1c34d489_f3f3_435d_ae32_175e8028c531
is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 1680
is: C05273
type: Species
is: CHEBI:61405
initial amount: NaN
constant: false
in compartment: meta cell
notes: iJO1366:M_td2coa_c
initial concentration: 0.1
boundary condition: false
has only substance units: false
is: SBO:0000247
name: trans-Tetradec-2-enoyl-CoA

http://identifiers.org/biomodels.db/BIOMD0000000470#ffd7e03e_9fa4_4c9e_8768_30f6c564ee16
stoichiometry: 1.0
species: meta s 0451
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http://identifiers.org/biomodels.db/BIOMD0000000470#bbdea078_31e9_4dd8_bae9_6df91ad81c5d
stoichiometry: 1.0
species: meta s 0045
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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_07b02050_ff77_4e5c_8616_4a16fc75e289
units: dimensionless
value: 0.00539107129442444
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#ab7091e4_6457_42bb_a4b0_ce8e26253674
is: SBO:0000324
value: 5.39107129442455E-4
type: LocalParameter

meta e 0149
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is encoded by: eco:b0420
initial amount: NaN
in compartment: meta cell
boundary condition: true
initial concentration: 0.001
type: Species
is: P77488
constant: true
has only substance units: false
name: dxs

http://identifiers.org/biomodels.db/BIOMD0000000470#_36216b3d_3261_4b74_a125_9f707641492c
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_46e99597_e69c_457c_a005_b02bdeda406b
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_8ae347a7_eb94_4c9d_9046_6aa7bc38e746
name: per mM
type: SBMLUnitsDef

http://identifiers.org/biomodels.db/BIOMD0000000470#d15440d9_fd5d_464c_8988_b4e46692162f
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_40317ba1_0b2c_48f5_9a04_2abc36aee3d1
is: SBO:0000281
value: 0.02
type: LocalParameter

meta s 0304
name: 3-Oxotetradecanoyl-[acyl-carrier protein]
notes: iJO1366:M_3omrsACP_c
in compartment: meta cell
boundary condition: false
initial concentration: 0.1
initial amount: NaN
is: SBO:0000247
has only substance units: false
type: Species
is: C05759
constant: false

meta e 0848
type: Species
is: P17115
name: gutQ
boundary condition: true
is encoded by: eco:b2708
initial concentration: 0.001
initial amount: NaN
is: SBO:0000252
in compartment: meta cell
has only substance units: false
constant: true

meta r 0500
name: diaminopimelate epimerase
is: SBO:0000176
reversible: true
type: Reaction
is: http://identifiers.org/ec-code/5.1.1.7
fast: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_29ccaf52_38d9_4810_a254_c0f7046dfb80
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_56de88f5_e58f_4a4b_85e1_9db48a600f6a
is: SBO:0000324
value: 3.60143508877284E-4
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#d0043d4b_aa17_4038_a1a0_83795c426e21
stoichiometry: 1.0
species: meta s 0344
type: SpeciesReference

meta s 0303
is: SBO:0000247
boundary condition: false
constant: false
notes: iJO1366:M_3oocoa_c
in compartment: meta cell
is: C05267
initial concentration: 0.1
name: 3-Oxooctanoyl-CoA
is: CHEBI:62619
has only substance units: false
initial amount: NaN
type: Species

http://identifiers.org/biomodels.db/BIOMD0000000470#_15caf27c_5d03_4582_a40e_8b33f650a83b
is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 0501
is: SBO:0000176
name: dihydoorotic acid dehydrogenase (quinone8)
reversible: true
fast: false
type: Reaction
is: http://identifiers.org/ec-code/1.3.3.1

http://identifiers.org/biomodels.db/BIOMD0000000470#_63f7ebcb_c41b_4ddb_812a_7564cc74f027
units: dimensionless
value: 2.77033467884759E-7
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#fc91e925_5c54_4703_8859_f2957ae86a96
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#fb5d0880_5044_46f9_972a_d608e6e30d72
is: SBO:0000281
value: 0.2
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_64638022_73c3_448f_b522_fec2232c2927
is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
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meta e 0030
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initial amount: NaN
initial concentration: 0.001
has only substance units: false
type: Species
boundary condition: true
is: SBO:0000252
constant: true
name: leuD
in compartment: meta cell

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 1275
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is: P0A6B4
boundary condition: true
is encoded by: eco:b4053
type: Species
in compartment: meta cell
initial amount: NaN
initial concentration: 0.001
constant: true
has only substance units: false
is: SBO:0000252

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0266
type: SpeciesReference

meta e 0328
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type: Species
name: cmk
is: P0A6I0
is: SBO:0000252
has only substance units: false
initial concentration: 0.001
initial amount: NaN
boundary condition: true
in compartment: meta cell
constant: true

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta r 1425
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is: SBO:0000176
name: valine transaminase
fast: false
reversible: true
type: Reaction

meta r 0763
is: http://identifiers.org/ec-code/1.1.1.23
fast: false
is: SBO:0000176
type: Reaction
name: histidinol dehydrogenase
reversible: true

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units: dimensionless
value: 0.040973249971501
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 1276
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name: tyrB
initial amount: NaN
is: SBO:0000252
has only substance units: false
initial concentration: 0.001
is: P04693
constant: true
type: Species
boundary condition: true
is encoded by: eco:b4054

meta e 0326
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is encoded by: eco:b0907
type: Species
constant: true
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is: P23721
boundary condition: true
initial concentration: 0.001
in compartment: meta cell
initial amount: NaN

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units: dimensionless
value: 0.0727081263565024
type: LocalParameter

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is: SBO:0000176
type: Reaction
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reversible: true

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stoichiometry: 1.0
species: meta s 1335
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stoichiometry: 1.0
species: meta s 1571
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meta e 0327
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is encoded by: eco:b0908
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is: SBO:0000252
has only substance units: false

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value: 0.1
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units: dimensionless
value: 0.0038479948756196
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value: 0.302798412025661
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value: 0.1
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meta e 1273
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type: Species
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initial concentration: 0.001
initial amount: NaN
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constant: true
boundary condition: true
is: SBO:0000252

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stoichiometry: 1.0
species: meta s 1762
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is: SBO:0000324
value: 0.0058689540273579
type: LocalParameter

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species: meta s 0333
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stoichiometry: 1.0
species: meta s 0451
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value: 0.1
type: LocalParameter

meta r 0761
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is: SBO:0000176
name: hexokinase (D-fructose:ATP)
type: Reaction
reversible: true

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is: SBO:0000322
value: 0.1
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stoichiometry: 5.0
species: meta s 1028
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stoichiometry: 1.0
species: meta s 0397
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stoichiometry: 7.0E-6
species: meta s 1261
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stoichiometry: 1.0
species: meta s 0052
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is: SBO:0000324
value: 0.642296555739804
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is: SBO:0000323
value: 0.1
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stoichiometry: 1.0
species: meta s 0754
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stoichiometry: 1.0
species: meta s 1333
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stoichiometry: 1.0
species: meta s 0783
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stoichiometry: 1.0
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value: 0.1
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stoichiometry: 1.0
species: meta s 0859
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meta e 0323
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constant: true
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boundary condition: true
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is: P0A9N4
type: Species

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stoichiometry: 1.0
species: meta s 1101
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meta r 1421
type: Reaction
is: SBO:0000176
is: http://identifiers.org/ec-code/4.1.1.37
name: uroporphyrinogen decarboxylase (uroporphyrinogen III)
fast: false
reversible: true

meta s 1318
is: C03838
name: N1-(5-Phospho-D-ribosyl)glycinamide
is: SBO:0000247
in compartment: meta cell
is: CHEBI:58457
initial amount: NaN
boundary condition: false
has only substance units: false
notes: iJO1366:M_gar_c
initial concentration: 0.1
constant: false
type: Species

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0395
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stoichiometry: 1.0
species: meta s 0454
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is: SBO:0000322
value: 0.1
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stoichiometry: 1.0
species: meta s 0467
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meta r 1422
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name: uroporphyrinogen methyltransferase
type: Reaction
is: SBO:0000176
is: http://identifiers.org/ec-code/2.1.1.107
fast: false

http://identifiers.org/biomodels.db/BIOMD0000000470#aa4dfe0c_5461_47c2_a8bf_0ef7d011544b
is: SBO:0000281
value: 0.2
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_6adff519_8fc2_4712_8fbf_83bbb696320a
stoichiometry: 1.0
species: meta s 0467
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http://identifiers.org/biomodels.db/BIOMD0000000470#f6e1afdc_b653_4975_89d0_062f6875eb42
stoichiometry: 1.0
species: meta s 1095
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is: SBO:0000281
value: 0.2
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta r 1423
name: uroporphyrinogen-III synthase
type: Reaction
is: SBO:0000176
fast: false
reversible: true
is: http://identifiers.org/ec-code/4.2.1.75

http://identifiers.org/biomodels.db/BIOMD0000000470#b11abe28_8a20_4160_846b_34f11c24895b
is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 1277
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initial amount: NaN
is: SBO:0000252
initial concentration: 0.001
has only substance units: false
name: aphA
type: Species
is: P0AE22
boundary condition: true
is encoded by: eco:b4055
constant: true

meta s 0328
in compartment: meta cell
notes: iJO1366:M_4mop_c
name: 4-Methyl-2-oxopentanoate
initial concentration: 0.1
is: CHEBI:17865
is: SBO:0000247
boundary condition: false
initial amount: NaN
has only substance units: false
type: Species
is: C00233
constant: false

http://identifiers.org/biomodels.db/BIOMD0000000470#d8adeaf3_78de_4b28_b343_9623b09f540d
is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_86d60066_b67e_43fc_b1b1_2f00d6fdb58a
stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

meta s 1530
has only substance units: false
name: Pyridoxine 5'-phosphate
is: C00627
notes: iJO1366:M_pdx5p_c
type: Species
in compartment: meta cell
is: SBO:0000247
boundary condition: false
initial concentration: 0.1
initial amount: NaN
constant: false
is: CHEBI:58589

http://identifiers.org/biomodels.db/BIOMD0000000470#bc711891_6053_4d89_9dc7_f7cf04951d15
stoichiometry: 1.0
species: meta s 0859
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is: SBO:0000323
value: 0.1
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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_1a4759d5_4c26_4e84_a16d_983721fbb83b
stoichiometry: 1.0
species: meta s 1334
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is: SBO:0000322
value: 0.1
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meta e 0110
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is: SBO:0000252
type: Species
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boundary condition: true
initial concentration: 0.001
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meta e 0324
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name: pflB
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boundary condition: true
type: Species
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constant: true
is encoded by: eco:b0903

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stoichiometry: 1.0
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is: SBO:0000324
value: 1.84169772019492
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stoichiometry: 1.0
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stoichiometry: 2.0
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is: SBO:0000322
value: 0.1
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is: SBO:0000324
value: 0.116457482542278
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meta s 1531
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notes: iJO1366:M_pyr_c
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initial concentration: 0.1
name: Pyruvate
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initial amount: NaN
is: CHEBI:15361
boundary condition: false
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type: Species
is: SBO:0000247

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is: SBO:0000281
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value: 0.0131230753965474
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units: dimensionless
value: 3.08892317229363E-5
type: LocalParameter

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is: SBO:0000322
value: 0.1
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meta s 0217
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constant: false
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type: Species
is: C02631
is: CHEBI:58085
initial amount: NaN
in compartment: meta cell
boundary condition: false
notes: iJO1366:M_2ippm_c
initial concentration: 0.1
is: SBO:0000247

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stoichiometry: 1.0
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stoichiometry: 1.0
species: meta s 1435
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meta s 0162
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notes: iJO1366:M_fpram_c
initial concentration: 0.1
is: SBO:0000247
has only substance units: false
type: Species
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value: 0.1
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initial amount: NaN
type: Species
constant: false
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initial concentration: 0.1
notes: iJO1366:M_moadamp_c

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stoichiometry: 1.0
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type: LocalParameter

meta s 0218
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is: C04752
initial amount: NaN
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initial concentration: 0.1
notes: iJO1366:M_2mahmp_c
is: CHEBI:57841
is: SBO:0000247
name: 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate
constant: false
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type: Species

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is: SBO:0000281
value: 0.2
type: LocalParameter

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stoichiometry: 4.0
species: meta s 0451
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stoichiometry: 1.0
species: meta s 1511
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stoichiometry: 1.0
species: meta s 0875
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meta r 0602
is: http://identifiers.org/ec-code/4.99.1.1
is: SBO:0000176
reversible: true
name: Ferrochelatase
type: Reaction
fast: false

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is: SBO:0000281
units: dimensionless
value: 2.0
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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 3.0
species: meta s 1336
type: SpeciesReference

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units: dimensionless
value: 1.22E-4
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1333
type: SpeciesReference

meta r 0769
type: Reaction
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is: SBO:0000176
name: homoserine dehydrogenase (NADPH)
reversible: true
fast: false

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0474
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is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 0160
is: C01304
notes: iJO1366:M_25drapp_c
initial concentration: 0.1
boundary condition: false
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initial amount: NaN
is: SBO:0000247
type: Species
is: CHEBI:58614
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constant: false
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stoichiometry: 1.0
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value: 0.1
type: LocalParameter

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species: meta s 0454
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stoichiometry: 1.0
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stoichiometry: 1.0
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stoichiometry: 1.0
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stoichiometry: 0.1441
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initial concentration: 0.1
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initial amount: NaN
notes: iJO1366:M_dgtp_c
name: dGTP
constant: false
is: C00286
is: SBO:0000247

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is: SBO:0000322
value: 0.1
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value: 6.17784634458656E-4
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is: SBO:0000322
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stoichiometry: 1.0
species: meta s 0467
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is: SBO:0000324
value: 0.00441757569090893
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is: SBO:0000324
value: 0.183723055551664
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is: SBO:0000322
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is: SBO:0000322
value: 0.1
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is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 0765
reversible: true
name: histidinol-phosphate transaminase
type: Reaction
is: SBO:0000176
is: http://identifiers.org/ec-code/2.6.1.9
fast: false

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units: dimensionless
value: 0.640969334565238
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1101
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units: dimensionless
value: 1.68990415703956E-5
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0311
type: SpeciesReference

meta r 0764
is: http://identifiers.org/ec-code/3.1.3.15
reversible: true
fast: false
type: Reaction
is: SBO:0000176
name: histidinol-phosphatase

http://identifiers.org/biomodels.db/BIOMD0000000470#f38f57be_a56c_44be_a34f_d709caea91e9
stoichiometry: 1.0
species: meta s 0233
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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.155110829611326
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0395
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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta e 0893
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type: Species
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initial amount: NaN
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is: SBO:0000252

meta s 1109
initial concentration: 0.1
is: CHEBI:57699
in compartment: meta cell
name: L-Histidinol
type: Species
boundary condition: false
has only substance units: false
is: C00860
initial amount: NaN
notes: iJO1366:M_histd_c
constant: false
is: SBO:0000247

meta s 0765
is: CHEBI:17001
initial amount: NaN
is: SBO:0000247
has only substance units: false
type: Species
in compartment: meta cell
initial concentration: 0.1
notes: iJO1366:M_dhnpt_c
name: Dihydroneopterin
is: C04874
boundary condition: false
constant: false

http://identifiers.org/biomodels.db/BIOMD0000000470#_1f9da6b2_8fd5_4c5d_8ea8_490173e00907
stoichiometry: 1.0
species: meta s 0295
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stoichiometry: 1.0
species: meta s 0316
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units: dimensionless
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species: meta s 1240
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units: dimensionless
value: 0.02702
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is: SBO:0000324
value: 0.573625499601014
type: LocalParameter

meta e 0894
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type: Species
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name: thyA
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initial concentration: 0.001
initial amount: NaN
boundary condition: true
is: SBO:0000252
is: P0A884
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stoichiometry: 1.0
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value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0096
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in compartment: meta cell
boundary condition: false
is: SBO:0000247
initial concentration: 0.1
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notes: iJO1366:M_ogmeACP_c
initial amount: NaN
name: 3-Oxo-glutaryl-[acyl-carrier protein] methyl ester
constant: false
type: Species

meta r 1043
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type: Reaction
is: http://identifiers.org/ec-code/2.7.4.6
is: SBO:0000176
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value: 0.873625042495761
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stoichiometry: 1.0
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stoichiometry: 1.0
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meta s 0903
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meta e 0990
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is: SBO:0000281
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units: dimensionless
value: 3.08892317222495E-5
type: LocalParameter

meta e 0991
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type: Species
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initial concentration: 0.001
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is: SBO:0000324
value: 0.539223483498837
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stoichiometry: 1.0
species: meta s 0543
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is: SBO:0000322
value: 0.1
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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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value: 0.2
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 0897
is: P00861
name: lysA
initial concentration: 0.001
in compartment: meta cell
is encoded by: eco:b2838
initial amount: NaN
type: Species
has only substance units: false
constant: true
boundary condition: true
is: SBO:0000252

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000281
value: 20.0
type: LocalParameter

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stoichiometry: 0.001831
species: meta s 1333
type: SpeciesReference

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is: SBO:0000324
value: 0.0040054422301416
type: LocalParameter

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is: SBO:0000322
value: 0.1
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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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notes: iJO1366:M_2h3oppan_c
in compartment: meta cell
type: Species
constant: false
initial concentration: 0.1
is: CHEBI:57978
is: C01146
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initial amount: NaN
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has only substance units: false

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stoichiometry: 1.0
species: meta s 1432
type: SpeciesReference

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value: 0.1
type: LocalParameter

meta s 1105
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is: C02987
type: Species
initial concentration: 0.1
is: SBO:0000247
in compartment: meta cell
name: L-Glutamyl-tRNA(Glu)
constant: false
initial amount: NaN
has only substance units: false
boundary condition: false
notes: iJO1366:M_glutrna_c

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stoichiometry: 1.0
species: meta s 1095
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

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name: nucleoside-triphosphatase (ATP)
reversible: true
type: Reaction
is: SBO:0000176
fast: false

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value: 0.1
type: LocalParameter

meta s 0768
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constant: false
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initial concentration: 0.1
is: C02463
initial amount: NaN
type: Species
notes: iJO1366:M_dscl_c
is: CHEBI:58827

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 2.0
species: meta s 0861
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value: 0.00330916477964549
type: LocalParameter

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stoichiometry: 1.0
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value: 0.1
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meta s 0155
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initial amount: NaN
notes: iJO1366:M_23dhdp_c
constant: false
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initial concentration: 0.1
is: C03340
is: CHEBI:30620
type: Species
in compartment: meta cell

meta e 0746
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initial amount: NaN
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constant: true
boundary condition: true

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stoichiometry: 1.0
species: meta s 1732
type: SpeciesReference

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units: dimensionless
value: 0.0447994977198517
type: LocalParameter

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value: 0.1
type: LocalParameter

meta e 0993
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is: SBO:0000252
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initial concentration: 0.001
constant: true
initial amount: NaN
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type: Species
name: kdsD

meta s 0767
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is: CHEBI:17839
name: Dihydropteroate
has only substance units: false
is: C00921
notes: iJO1366:M_dhpt_c
initial concentration: 0.1
constant: false
in compartment: meta cell
boundary condition: false

meta r 1046
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fast: false
is: http://identifiers.org/ec-code/2.7.4.6
reversible: true
type: Reaction
is: SBO:0000176

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units: dimensionless
value: 0.052796345817737
type: LocalParameter

meta e 0742
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is: P77434
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name: yfdZ
initial concentration: 0.001
type: Species
constant: true
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is encoded by: eco:b2379
boundary condition: true
initial amount: NaN

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stoichiometry: 1.0
species: meta s 0330
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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0226
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0214
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meta e 0994
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name: kdsC
initial concentration: 0.001
type: Species
is encoded by: eco:b3198
constant: true
is: SBO:0000252
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initial amount: NaN

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stoichiometry: 1.0
species: meta s 0451
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0116
type: SpeciesReference

meta s 1106
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constant: false
is: C00135
in compartment: meta cell
initial concentration: 0.1
name: L-Histidine
is: CHEBI:15971
has only substance units: false
notes: iJO1366:M_his_DASH_L_c
boundary condition: false
initial amount: NaN
type: Species

meta r 1045
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fast: false
is: http://identifiers.org/ec-code/2.7.4.6
type: Reaction
is: SBO:0000176
reversible: true

meta s 0766
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is: SBO:0000247
initial concentration: 0.1
is: CHEBI:58762
name: Dihydroneopterin monophosphate
in compartment: meta cell
constant: false
is: C05925
notes: iJO1366:M_dhpmp_c
initial amount: NaN
type: Species

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 0896
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has only substance units: false
initial amount: NaN
boundary condition: true
type: Species
is encoded by: eco:b2836
name: aas
is: P31119
is: SBO:0000252
constant: true

meta e 0743
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name: glk
constant: true
has only substance units: false
type: Species
is: P0A6V8
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is encoded by: eco:b2388
in compartment: meta cell
initial amount: NaN

meta e 0682
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type: Species
name: atoB
is encoded by: eco:b2224
initial amount: NaN
has only substance units: false
boundary condition: true
in compartment: meta cell
is: SBO:0000252
is: P76461

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0411
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is: SBO:0000324
value: 0.0538719282586744
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0421
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stoichiometry: 1.0
species: meta s 0766
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stoichiometry: 1.0
species: meta s 1372
type: SpeciesReference

meta s 1101
initial concentration: 0.1
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constant: false
is: CHEBI:18050
boundary condition: false
name: L-Glutamine
notes: iJO1366:M_gln_DASH_L_c
initial amount: NaN
is: SBO:0000247
type: Species
has only substance units: false
is: C00064

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0233
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units: dimensionless
value: 0.158233967969303
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

meta s 1315
initial amount: NaN
initial concentration: 0.1
name: N-Succinyl-2-L-amino-6-oxoheptanedioate
boundary condition: false
has only substance units: false
in compartment: meta cell
is: C04462
constant: false
type: Species
is: SBO:0000247
notes: iJO1366:M_sl2a6o_c
is: CHEBI:15685

meta e 0330
has only substance units: false
boundary condition: true
constant: true
is encoded by: eco:b0915
name: lpxK
initial amount: NaN
type: Species
initial concentration: 0.001
in compartment: meta cell
is: SBO:0000252
is: P27300

http://identifiers.org/biomodels.db/BIOMD0000000470#_2d53fd61_5469_40c9_b359_81afcf511bd6
is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0783
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stoichiometry: 1.0
species: meta s 0783
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units: dimensionless
value: 9.26676951688061E-5
type: LocalParameter

meta s 1100
type: Species
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boundary condition: false
initial concentration: 0.1
in compartment: meta cell
constant: false
is: CHEBI:17232
notes: iJO1366:M_glu5sa_c
name: L-Glutamate 5-semialdehyde
initial amount: NaN
is: C01165
is: SBO:0000247

http://identifiers.org/biomodels.db/BIOMD0000000470#_5cd575fa_5fde_45a5_ad51_272987bd7fc4
is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1512
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stoichiometry: 1.0
species: meta s 1189
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units: dimensionless
value: 0.5137
type: LocalParameter

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units: dimensionless
value: 0.00374272215765511
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0446
type: SpeciesReference

meta s 0659
notes: iJO1366:M_glc_DASH_D_e
initial concentration: 1.0
is: C00031
constant: true
initial amount: NaN
has only substance units: false
boundary condition: true
type: Species
name: D-Glucose
is: SBO:0000247
is: CHEBI:4167
in compartment: meta extracellular

meta e 0331
is: P04951
initial amount: NaN
type: Species
is encoded by: eco:b0918
initial concentration: 0.001
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constant: true
is: SBO:0000252
has only substance units: false
boundary condition: true
name: kdsB

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stoichiometry: 2.23E-4
species: meta s 0859
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0421
type: SpeciesReference

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is: SBO:0000322
value: 0.1
type: LocalParameter

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units: dimensionless
value: 0.179555156278507
type: LocalParameter

meta s 0325
is: SBO:0000247
is: CHEBI:17879
is: C00156
boundary condition: false
initial amount: NaN
in compartment: meta cell
has only substance units: false
type: Species
notes: iJO1366:M_4hbz_c
constant: false
initial concentration: 0.1
name: 4-Hydroxybenzoate

http://identifiers.org/biomodels.db/BIOMD0000000470#_5078c723_5fd0_4f14_8c2b_5696bef1e83a
is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1531
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is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 0332
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constant: true
is: P00509
boundary condition: true
initial amount: NaN
is encoded by: eco:b0928
type: Species
is: SBO:0000252
initial concentration: 0.001
in compartment: meta cell
name: aspC

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stoichiometry: 1.0
species: meta s 1336
type: SpeciesReference

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0421
type: SpeciesReference

meta s 1316
initial concentration: 0.1
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has only substance units: false
in compartment: meta cell
constant: false
notes: iJO1366:M_sl26da_c
is: SBO:0000247
boundary condition: false
type: Species
is: CHEBI:58087
initial amount: NaN
is: C04421

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 0657
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boundary condition: false
type: Species
constant: false
name: D-Glucose
is: SBO:0000247
initial amount: NaN
has only substance units: false
initial concentration: 0.1
is: CHEBI:4167
notes: iJO1366:M_glc_DASH_D_c
in compartment: meta cell

http://identifiers.org/biomodels.db/BIOMD0000000470#_1a38c87e_599d_411d_a075_ec037b6bac9a
is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000324
value: 0.475389431717989
type: LocalParameter

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is: SBO:0000322
value: 0.1
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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1141
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stoichiometry: 1.0
species: meta s 0467
type: SpeciesReference

meta r 1153
fast: false
type: Reaction
name: phosphoglycerate mutase
is: SBO:0000176
is: http://identifiers.org/ec-code/5.4.2.1
reversible: true

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stoichiometry: 1.0
species: meta s 0421
type: SpeciesReference

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 1318
type: SpeciesReference

meta e 1272
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type: Species
is: SBO:0000252
initial amount: NaN
has only substance units: false
constant: true
is encoded by: eco:b4040
in compartment: meta cell
initial concentration: 0.001
name: ubiA

meta s 1537
is: C03722
type: Species
boundary condition: false
is: CHEBI:29959
constant: false
name: Quinolinate
notes: iJO1366:M_quln_c
initial concentration: 0.1
is: SBO:0000247
in compartment: meta cell
initial amount: NaN
has only substance units: false

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1119
type: SpeciesReference

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is: SBO:0000324
value: 2.05672957465683
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1765
type: SpeciesReference

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units: dimensionless
value: 9.26676951688061E-5
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1577
type: SpeciesReference

meta r 1152
reversible: true
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is: http://identifiers.org/ec-code/2.7.2.3
type: Reaction
is: SBO:0000176
fast: false

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta e 1271
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is: P26602
boundary condition: true
initial amount: NaN
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type: Species
constant: true
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is: SBO:0000252
is encoded by: eco:b4039

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value: 0.1
type: LocalParameter

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value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0802
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0903
type: SpeciesReference

meta s 0654
type: Species
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boundary condition: false
constant: false
notes: iJO1366:M_gam6p_c
is: C00352
is: CHEBI:15873
initial amount: NaN
has only substance units: false
initial concentration: 0.1
name: D-Glucosamine 6-phosphate
in compartment: meta cell

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value: 0.1
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0435
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is: SBO:0000324
value: 0.320739653506413
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0263
type: SpeciesReference

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is: SBO:0000324
value: 1.84262439714661
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta r 1151
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is: http://identifiers.org/ec-code/1.1.1.95
reversible: true
type: Reaction
is: SBO:0000176
fast: false

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is: SBO:0000324
value: 7.97856388897518E-4
type: LocalParameter

meta s 1312
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is: SBO:0000247
initial concentration: 0.1
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type: Species
constant: false
in compartment: meta cell
name: N-Carbamoyl-L-aspartate
notes: iJO1366:M_cbasp_c
is: C00438
boundary condition: false

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

meta s 0653
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initial concentration: 0.1
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type: Species
is: SBO:0000247
constant: false
notes: iJO1366:M_gam1p_c
name: D-Glucosamine 1-phosphate
is: CHEBI:58516
boundary condition: false
initial amount: NaN
has only substance units: false

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000281
value: 0.02
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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units: dimensionless
value: 7.20979601425486E-4
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta r 1150
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reversible: true
type: Reaction
is: SBO:0000176
is: http://identifiers.org/ec-code/5.4.2.10
name: phosphoglucosamine mutase

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is: SBO:0000281
value: 0.2
type: LocalParameter

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is: SBO:0000324
value: 1.57947252181058
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#bfb2e13c_8fed_4d58_b398_1028a363e075
stoichiometry: 8.0
species: meta s 0783
type: SpeciesReference

meta s 1546
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name: Riboflavin
type: Species
is: C00255
boundary condition: false
is: CHEBI:17015
initial concentration: 0.1
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notes: iJO1366:M_ribflv_c
is: SBO:0000247
constant: false
initial amount: NaN

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stoichiometry: 1.0
species: meta s 1561
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is: SBO:0000324
value: 0.00273653660047176
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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units: dimensionless
value: 0.0107829736892899
type: LocalParameter

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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
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is: SBO:0000323
value: 0.1
type: LocalParameter

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units: dimensionless
value: 0.0343363591697112
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_68ced0b2_a8d3_4960_8689_04cc434ea625
name: copper (Cu+2) transport via diffusion (extracellular to periplasm)
is: SBO:0000185
fast: false
type: Reaction
reversible: true

meta e 1262
in compartment: meta cell
type: Species
has only substance units: false
initial amount: NaN
initial concentration: 0.001
boundary condition: true
is: SBO:0000252
name: metH
is: P13009
is encoded by: eco:b4019
constant: true

http://identifiers.org/biomodels.db/BIOMD0000000470#d0ff712e_bc03_4a58_894e_0ce70c703606
stoichiometry: 1.0
species: meta s 0265
type: SpeciesReference

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is: SBO:0000281
value: 0.2
type: LocalParameter

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is: SBO:0000323
value: 0.1
type: LocalParameter

meta e 0125
boundary condition: true
is: P77580
initial amount: NaN
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initial concentration: 0.001
type: Species
is: SBO:0000252
constant: true
name: mhpF
is encoded by: eco:b0351
has only substance units: false

meta s 0318
is: SBO:0000247
constant: false
notes: iJO1366:M_4abz_c
is: CHEBI:17836
initial concentration: 0.1
boundary condition: false
name: 4-Aminobenzoate
has only substance units: false
initial amount: NaN
is: C00568
in compartment: meta cell
type: Species

meta e 1263
boundary condition: true
is: P08660
type: Species
in compartment: meta cell
initial amount: NaN
name: lysC
constant: true
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is: SBO:0000252
initial concentration: 0.001
is encoded by: eco:b4024

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#bfb83de8_9292_446f_b5ca_b13b6c06afc2
stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

meta s 1544
boundary condition: false
notes: iJO1366:M_trdrd_c
is: C00342
is: SBO:0000247
constant: false
has only substance units: false
name: Reduced thioredoxin
initial concentration: 0.1
type: Species
initial amount: NaN
in compartment: meta cell
is: CHEBI:15967

http://identifiers.org/biomodels.db/BIOMD0000000470#_9a2bdf1c_0394_4ece_b39b_049b21de0ad2
stoichiometry: 1.0
species: meta s 0411
type: SpeciesReference

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units: dimensionless
value: 3.11662651885034E-5
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0998
type: SpeciesReference

meta r 1413
is: SBO:0000176
is: http://identifiers.org/ec-code/3.6.1.27
fast: false
reversible: true
name: undecaprenyl-diphosphatase
type: Reaction

http://identifiers.org/biomodels.db/BIOMD0000000470#f4ba4143_6b90_4156_93d8_f961efff62d9
stoichiometry: 1.0
species: meta s 0453
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0543
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stoichiometry: 1.0
species: meta s 1430
type: SpeciesReference

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stoichiometry: 1.0
species: meta s 0467
type: SpeciesReference

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is: SBO:0000322
value: 0.1
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is: SBO:0000322
value: 0.1
type: LocalParameter

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is: SBO:0000323
value: 0.1
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is: SBO:0000322
value: 0.1
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is: SBO:0000324
value: 1.57447354521992E-4
type: LocalParameter

meta e 1264
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is: P0A6T1
is: SBO:0000252
initial concentration: 0.001
is encoded by: eco:b4025
boundary condition: true
name: pgi
constant: true

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stoichiometry: 1.0
species: meta s 0929
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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

meta s 0316
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is: CHEBI:58406
notes: iJO1366:M_4adcho_c
boundary condition: false
initial concentration: 0.1
is: SBO:0000247
initial amount: NaN
has only substance units: false
is: C11355
type: Species
constant: false
name: 4-amino-4-deoxychorismate

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is: SBO:0000323
value: 0.1
type: LocalParameter

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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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is: SBO:0000324
value: 0.27491970300349
type: LocalParameter

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stoichiometry: 1.0
species: meta s 1095
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is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

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stoichiometry: 1.0
species: meta s 0575
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stoichiometry: 1.0
species: meta s 1336
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reversible: true
name: fatty-acid-CoA thioesterase (hexadecenoate)
fast: false
is: SBO:0000176
type: Reaction

meta r 0186
type: Reaction
fast: false
name: 5'-deoxyadenosine nuclosidase
is: SBO:0000176
reversible: true

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is: SBO:0000324
value: 0.887922047214499
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stoichiometry: 1.0
species: meta s 0721
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units: dimensionless
value: 0.00108153866040612
type: LocalParameter

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is: SBO:0000281
units: dimensionless
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type: LocalParameter

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stoichiometry: 1.0
species: meta s 0937
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stoichiometry: 1.0
species: meta s 0726
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meta e 0531
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is: P0AFU8
initial amount: NaN
is: SBO:0000252
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constant: true
is encoded by: eco:b1662
boundary condition: true

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stoichiometry: 1.0
species: meta s 0043
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is: SBO:0000281
units: dimensionless
value: 2.0
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stoichiometry: 1.0
species: meta s 0272
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stoichiometry: 1.0
species: meta s 0671
type: SpeciesReference

meta r 0771
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fast: false
is: SBO:0000176
is: http://identifiers.org/ec-code/2.3.1.46
type: Reaction
name: homoserine O-succinyltransferase

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stoichiometry: 1.0
type: SpeciesReference

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is: SBO:0000323
value: 0.1
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constant: false
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stoichiometry: 1.0
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meta r 1285
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meta r 0777
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meta r 0489
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BIOMD0000000470
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reaction: meta r 0268
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species: meta s 1558
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species: meta e 1273
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species: meta s 0760

meta r 1288
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is: http://identifiers.org/ec-code/3.2.2.9
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is: SBO:0000176

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meta s 0920
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meta e 1373
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meta s 1321
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meta s 0913
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meta e 0691
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meta s 0017
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boundary condition: false
name: (R)-2,3-Dihydroxy-3-methylbutanoate
is: C04272
in compartment: meta cell
constant: false
is: SBO:0000247
initial concentration: 0.1
notes: iJO1366:M_23dhmb_c

http://identifiers.org/biomodels.db/BIOMD0000000470#da280144_622a_4d9d_b195_1da57799c250
has only substance units: false
name: MoaD Protein with thiocarboxylate
notes: iJO1366:M_moadcosh_c
initial concentration: 0.1
initial amount: NaN
is: SBO:0000247
constant: false
boundary condition: false
type: Species
in compartment: meta cell

http://identifiers.org/biomodels.db/BIOMD0000000470#f96165eb_f183_4acc_9c4f_d57a876851e6
stoichiometry: 1.0
species: meta s 1170
type: SpeciesReference

http://identifiers.org/biomodels.db/BIOMD0000000470#_951ead90_20d6_47df_83fe_e179604094e5
is: SBO:0000281
units: dimensionless
value: 2.0
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_5c042304_771b_459c_92c8_a20fbb3d43f6
units: dimensionless
value: 4.63338474145563E-5
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_2fb944f9_91b3_444b_b1d5_42632fe89bfc
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#aa6ac7f0_79be_4201_bfb9_3bc5c17dd5c7
units: dimensionless
value: 0.0402391112803253
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_38ebc4e2_4f33_435d_a7c6_2e69d8c821f9
stoichiometry: 1.0
species: meta s 0945
type: SpeciesReference

meta r 0488
name: dephospho-CoA kinase
fast: false
type: Reaction
is: SBO:0000176
reversible: true
is: http://identifiers.org/ec-code/2.7.1.24

http://identifiers.org/biomodels.db/BIOMD0000000470#_016d0ee3_8367_4b5e_a312_7d2c7c033cf1
is: SBO:0000323
value: 0.1
type: LocalParameter

meta s 0018
is: CHEBI:49258
in compartment: meta cell
constant: false
is: SBO:0000247
boundary condition: false
initial concentration: 0.1
notes: iJO1366:M_23dhmp_c
initial amount: NaN
type: Species
is: C06007
has only substance units: false
name: (R)-2,3-Dihydroxy-3-methylpentanoate

http://identifiers.org/biomodels.db/BIOMD0000000470#_6e61a3bb_d793_4c47_aced_95f1c9cc949b
is: SBO:0000322
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/BIOMD0000000470#_61096343_3488_4414_a151_5938ed71f893
stoichiometry: 1.0
species: meta s 0945
type: SpeciesReference

W3 CDTF: Mon Oct 07 22:29:05 BST 2013