Ap1m2
type: EnsemblDatabaseReference

Ccdc113
type: EnsemblDatabaseReference

Lztfl1
type: EnsemblDatabaseReference

1430291_at
type: EFO_0005072
part of: A-AFFY-45

Adam23
type: EnsemblDatabaseReference

Tbx20 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2
p value: 0.00193564197335743
refers to: Tbx20
refers to: 1453351_at
t statistic: -11.0706255595567

Timmdc1
type: EnsemblDatabaseReference

1437207_at
type: EFO_0005072
part of: A-AFFY-45

Sox11 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2
p value: 0.00242657853079642
refers to: 1453002_at
refers to: Sox11
t statistic: 10.2947549574219

Zeb1
type: EnsemblDatabaseReference

Efcab11
type: EnsemblDatabaseReference

1424324_at
type: EFO_0005072
part of: A-AFFY-45

Zfp386
type: EnsemblDatabaseReference

Ciapin1
type: EnsemblDatabaseReference

Coro2b
type: EnsemblDatabaseReference

1418310_a_at
type: EFO_0005072
part of: A-AFFY-45

1452270_s_at
type: EFO_0005072
part of: A-AFFY-45

Nxt2 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4
p value: 0.0095094883300212
refers to: Nxt2
refers to: 1456599_at
t statistic: 6.74842269397324

1460190_at
type: EFO_0005072
part of: A-AFFY-45

Analysis of 'Setd2 knock out' vs 'wild type genotype'
type: MicroarrayDifferentialExpressionAnalysis

1437432_a_at
type: EFO_0005072
part of: A-AFFY-45

1438872_at
type: EFO_0005072
part of: A-AFFY-45

Tceanc2
type: EnsemblDatabaseReference

Triml1
type: EnsemblDatabaseReference

Fam131b
type: EnsemblDatabaseReference

1457072_at
type: EFO_0005072
part of: A-AFFY-45

Hemk1 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.3
p value: 8.03378530342947E-4
refers to: Hemk1
refers to: 1424703_at
t statistic: 13.3302418026697

Fbp2
type: EnsemblDatabaseReference

4930444M15Rik DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00940149496981168
refers to: 4930444M15Rik
refers to: 1431979_at
t statistic: -6.82869603272558

1700019A02Rik
type: EnsemblDatabaseReference

Tmem40
type: EnsemblDatabaseReference

Mep1b UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1
p value: 0.0480176618179161
refers to: Mep1b
refers to: 1418215_at
t statistic: 3.95159604574866

B830012L14Rik DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.0168361628282098
refers to: B830012L14Rik
refers to: 1439311_at
t statistic: -5.63866844122408

1430287_s_at
type: EFO_0005072
part of: A-AFFY-45

1444490_at
type: EFO_0005072
part of: A-AFFY-45

Aste1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00242657853079642
refers to: Aste1
refers to: 1447960_at
t statistic: -10.1417249579244

Mmrn2
type: EnsemblDatabaseReference

Esrp1 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.3
p value: 3.18788627392553E-4
refers to: Esrp1
refers to: 1454681_at
t statistic: 16.3410888000976

Paip1
type: EnsemblDatabaseReference

Lztfl1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.00700610270128584
refers to: 1435514_at
refers to: Lztfl1
t statistic: -7.43904714290391

1431979_at
type: EFO_0005072
part of: A-AFFY-45

Piwil2 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00925361411587341
refers to: Piwil2
refers to: 1449170_at
t statistic: -6.86122884136752

Mid1
type: EnsemblDatabaseReference

1449074_at
type: EFO_0005072
part of: A-AFFY-45

Mt2
type: EnsemblDatabaseReference

4930427A07Rik
type: EnsemblDatabaseReference

1434067_at
type: EFO_0005072
part of: A-AFFY-45

1452907_at
type: EFO_0005072
part of: A-AFFY-45

1420329_at
type: EFO_0005072
part of: A-AFFY-45

Fundc2
type: EnsemblDatabaseReference

(Sample) genotype/Setd2 knock out
type: EFO_0000001
property type: genotype
property value: Setd2 knock out

Zfp42
type: EnsemblDatabaseReference

Mt2 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2
p value: 0.00291634603140531
refers to: 1428942_at
refers to: Mt2
t statistic: -9.52507448869318

Slc7a6 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.00786550839113302
refers to: Slc7a6
refers to: 1440303_at
t statistic: -7.22729936511029

Rpl3l
type: EnsemblDatabaseReference

Ccnb1ip1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -3.1
p value: 7.40967198891878E-5
refers to: 1435998_at
refers to: Ccnb1ip1
t statistic: -21.821074135

Hemk1
type: EnsemblDatabaseReference

Cdc23
type: EnsemblDatabaseReference

Trim12a DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00422194966795299
refers to: Trim12a
refers to: 1437432_a_at
t statistic: -8.69386582700172

Scn3a
type: EnsemblDatabaseReference

Cthrc1
type: EnsemblDatabaseReference

T UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 2.1
p value: 0.0163909477332841
refers to: T
refers to: 1419304_at
t statistic: 5.69093599664982

Grik3 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0
p value: 0.0128234375257454
refers to: Grik3
refers to: 1440177_at
t statistic: 6.18861842382412

Esrp1
type: EnsemblDatabaseReference

Nlrx1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.0024442804055313
refers to: Nlrx1
refers to: 1433661_at
t statistic: -10.0095449323154

Ciapin1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00528792471347673
refers to: 1448140_at
refers to: Ciapin1
t statistic: -8.08758752916299

1420360_at
type: EFO_0005072
part of: A-AFFY-45

Mt1
type: EnsemblDatabaseReference

1449088_at
type: EFO_0005072
part of: A-AFFY-45

Efcab11 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00263553349236135
refers to: Efcab11
refers to: 1431667_s_at
t statistic: -9.78802145244775

1435998_at
type: EFO_0005072
part of: A-AFFY-45

Ttk UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4
p value: 0.00580234256137076
refers to: 1442594_at
refers to: Ttk
t statistic: 7.86910017179882

1451969_s_at
type: EFO_0005072
part of: A-AFFY-45

Ttc39c DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.00942465220449143
refers to: Ttc39c
refers to: 1426223_at
t statistic: -6.78665990829877

1428653_x_at
type: EFO_0005072
part of: A-AFFY-45

Zfp946
type: EnsemblDatabaseReference

Hmgb2
type: EnsemblDatabaseReference

Cubn DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2
p value: 0.00825430504677009
refers to: Cubn
refers to: 1426990_at
t statistic: -7.13640547272843

Ppcdc
type: EnsemblDatabaseReference

Uty UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 2.0
p value: 0.00521425999704175
refers to: 1422247_a_at
refers to: Uty
t statistic: 8.15550838014193

1430105_at
type: EFO_0005072
part of: A-AFFY-45

Atp7a
type: EnsemblDatabaseReference

1449170_at
type: EFO_0005072
part of: A-AFFY-45

Nxt2
type: EnsemblDatabaseReference

1438239_at
type: EFO_0005072
part of: A-AFFY-45

Dock5 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00351677366146829
refers to: Dock5
refers to: 1430291_at
t statistic: -9.12892493553201

1423327_at
type: EFO_0005072
part of: A-AFFY-45

1418215_at
type: EFO_0005072
part of: A-AFFY-45

1452123_s_at
type: EFO_0005072
part of: A-AFFY-45

Kifc3
type: EnsemblDatabaseReference

Cep162
type: EnsemblDatabaseReference

1423429_at
type: EFO_0005072
part of: A-AFFY-45

1419086_at
type: EFO_0005072
part of: A-AFFY-45

1438169_a_at
type: EFO_0005072
part of: A-AFFY-45

Gata6 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3
p value: 0.00416691642815139
refers to: Gata6
refers to: 1425464_at
t statistic: -8.75777720663432

1418662_at
type: EFO_0005072
part of: A-AFFY-45

Nupr1
type: EnsemblDatabaseReference

Ttk
type: EnsemblDatabaseReference

Aoah
type: EnsemblDatabaseReference

Prkar2a
type: EnsemblDatabaseReference

Galc
type: EnsemblDatabaseReference

Zfp386
type: EnsemblDatabaseReference

Pdlim5 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.0287270312940733
refers to: Pdlim5
refers to: 1429783_at
t statistic: -4.72434054103799

Coro2b
type: EnsemblDatabaseReference

1451540_at
type: EFO_0005072
part of: A-AFFY-45

Prickle1
type: EnsemblDatabaseReference

1439055_at
type: EFO_0005072
part of: A-AFFY-45

Triml1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2
p value: 0.00231215718357458
refers to: Triml1
refers to: 1438872_at
t statistic: -10.497007790227

Myo1f
type: EnsemblDatabaseReference

Tceanc2
type: EnsemblDatabaseReference

1426214_at
type: EFO_0005072
part of: A-AFFY-45

Chic1
type: EnsemblDatabaseReference

Yars
type: EnsemblDatabaseReference

Usp14
type: EnsemblDatabaseReference

Uty UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 4.0
p value: 8.3956368006449E-6
refers to: 1426598_at
refers to: Uty
t statistic: 36.1835433372048

Fam131b
type: EnsemblDatabaseReference

Supt7l UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1
p value: 8.06195124763561E-4
refers to: Supt7l
refers to: 1433374_at
t statistic: 13.2650118901869

1427596_at
type: EFO_0005072
part of: A-AFFY-45

Sox17
type: EnsemblDatabaseReference

1418926_at
type: EFO_0005072
part of: A-AFFY-45

Tmem40
type: EnsemblDatabaseReference

Gm19427 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -2.8
p value: 3.51392610086178E-4
refers to: Gm19427
refers to: 1440068_at
t statistic: -15.9034095892402

Mtus1
type: EnsemblDatabaseReference

Gata6
type: EnsemblDatabaseReference

Nefm UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2
p value: 0.0368914099663659
refers to: Nefm
refers to: 1422520_at
t statistic: 4.34524989468645

1418362_at
type: EFO_0005072
part of: A-AFFY-45

Mep1b
type: EnsemblDatabaseReference

Usp14 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.00575396141838548
refers to: Usp14
refers to: 1439201_at
t statistic: -7.90195128479258

Coro2b DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3
p value: 0.01534101915938
refers to: 1434326_x_at
refers to: Coro2b
t statistic: -5.84596608801245

Tsix
type: EnsemblDatabaseReference

1434171_at
type: EFO_0005072
part of: A-AFFY-45

Fbp2 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.028577698766502
refers to: Fbp2
refers to: 1449088_at
t statistic: -4.73594783383215

Cyyr1 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1
p value: 0.0365642921488506
refers to: 1435701_at
refers to: Cyyr1
t statistic: 4.36139590700157

Serpina3m DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -2.3
p value: 0.00427683812819036
refers to: 1421921_at
refers to: Serpina3m
t statistic: -8.6527123512815

Jakmip2
type: EnsemblDatabaseReference

1436501_at
type: EFO_0005072
part of: A-AFFY-45

1439204_at
type: EFO_0005072
part of: A-AFFY-45

Ppcdc DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.00611003068816116
refers to: 1424336_at
refers to: Ppcdc
t statistic: -7.71164572244232

1433661_at
type: EFO_0005072
part of: A-AFFY-45

Mettl7a1 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0
p value: 0.0119966855383363
refers to: Mettl7a1
refers to: 1434151_at
t statistic: 6.33653278022621

Ddx3y
type: EnsemblDatabaseReference

1423523_at
type: EFO_0005072
part of: A-AFFY-45

Prickle1 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1
p value: 0.0226680958274139
refers to: Prickle1
refers to: 1452249_at
t statistic: 5.10898589165043

(Assay) GSM1326664
type: Assay
has participant: A-AFFY-45

Kcnj3
type: EnsemblDatabaseReference

Gbp2 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2
p value: 0.0357902537339072
refers to: Gbp2
refers to: 1435906_x_at
t statistic: 4.39236616469787

1418429_at
type: EFO_0005072
part of: A-AFFY-45

Gipc2
type: EnsemblDatabaseReference

Zfp386 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.6
p value: 0.035369504975392
refers to: 1421139_a_at
refers to: Zfp386
t statistic: -4.41055285357501

Crisp1
type: EnsemblDatabaseReference

Piwil2
type: EnsemblDatabaseReference

Myo7a
type: EnsemblDatabaseReference

Ttc39c
type: EnsemblDatabaseReference

Eif2s3y UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 6.3
p value: 1.76906696210026E-6
refers to: Eif2s3y
refers to: 1417210_at
t statistic: 52.6478906900079

Cthrc1 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0
p value: 0.0011273609807455
refers to: 1452968_at
refers to: Cthrc1
t statistic: 12.4348068200519

Med1
type: EnsemblDatabaseReference

Med1 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0
p value: 0.00138325125153387
refers to: Med1
refers to: 1450402_at
t statistic: 11.778122729595

Fam25c DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5
p value: 0.00365388221470799
refers to: Fam25c
refers to: 1437019_at
t statistic: -9.02244527763501

1425464_at
type: EFO_0005072
part of: A-AFFY-45

Rpl39l UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.8
p value: 0.00242657853079642
refers to: Rpl39l
refers to: 1423327_at
t statistic: 10.1136397555502

Tsix DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.0430930505871355
refers to: 1427596_at
refers to: Tsix
t statistic: -4.09824113876971

4930444M15Rik
type: EnsemblDatabaseReference

Esco1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00510604376299261
refers to: Esco1
refers to: 1424324_at
t statistic: -8.229257446835

Kif5b
type: EnsemblDatabaseReference

Ap1m2
type: EnsemblDatabaseReference

1437388_at
type: EFO_0005072
part of: A-AFFY-45

Ccdc113
type: EnsemblDatabaseReference

Hmgb2 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.0420283162479947
refers to: Hmgb2
refers to: 1438307_at
t statistic: -4.13589797662961

1426439_at
type: EFO_0005072
part of: A-AFFY-45

Lztfl1
type: EnsemblDatabaseReference

Myo1f DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4
p value: 0.0434178627539343
refers to: Myo1f
refers to: 1429525_s_at
t statistic: -4.09003513328618

Adam23
type: EnsemblDatabaseReference

Timmdc1
type: EnsemblDatabaseReference

(Assay) GSM1326660
type: Assay
has participant: A-AFFY-45

Zeb1
type: EnsemblDatabaseReference

Efcab11
type: EnsemblDatabaseReference

1427042_at
type: EFO_0005072
part of: A-AFFY-45

1421205_at
type: EFO_0005072
part of: A-AFFY-45

Mid1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.0302718115020906
refers to: 1438239_at
refers to: Mid1
t statistic: -4.64189981800574

1456599_at
type: EFO_0005072
part of: A-AFFY-45

Mtus1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.0457507882611719
refers to: Mtus1
refers to: 1436501_at
t statistic: -4.02060426552065

Ciapin1
type: EnsemblDatabaseReference

B830012L14Rik
type: EnsemblDatabaseReference

1440303_at
type: EFO_0005072
part of: A-AFFY-45

1429372_at
type: EFO_0005072
part of: A-AFFY-45

Nupr1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00525249876613416
refers to: Nupr1
refers to: 1419665_a_at
t statistic: -8.11688619187874

1439300_at
type: EFO_0005072
part of: A-AFFY-45

Cep162
type: EnsemblDatabaseReference

Aass DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4
p value: 0.0158790785793783
refers to: 1423523_at
refers to: Aass
t statistic: -5.7759450316825

Gm19427
type: EnsemblDatabaseReference

1460670_at
type: EFO_0005072
part of: A-AFFY-45

1447960_at
type: EFO_0005072
part of: A-AFFY-45

Rpl39l
type: EnsemblDatabaseReference

Galnt3
type: EnsemblDatabaseReference

Zfp946 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4
p value: 0.00252721481873828
refers to: Zfp946
refers to: 1429690_at
t statistic: 9.86748143939283

Ubd
type: EnsemblDatabaseReference

Bcl11a UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4
p value: 0.0381014534369349
refers to: Bcl11a
refers to: 1457072_at
t statistic: 4.30396953963203

Eif2s3y
type: EnsemblDatabaseReference

Mt2
type: EnsemblDatabaseReference

1439712_at
type: EFO_0005072
part of: A-AFFY-45

4930427A07Rik
type: EnsemblDatabaseReference

Tmeff2
type: EnsemblDatabaseReference

Yars
type: EnsemblDatabaseReference

4930427A07Rik DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2
p value: 0.0041265540734709
refers to: 4930427A07Rik
refers to: 1452337_at
t statistic: -8.80670018804522

1419406_a_at
type: EFO_0005072
part of: A-AFFY-45

Aass
type: EnsemblDatabaseReference

1460434_at
type: EFO_0005072
part of: A-AFFY-45

Zfp874a
type: EnsemblDatabaseReference

Sox11 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1
p value: 0.00244198908309815
refers to: 1429372_at
refers to: Sox11
t statistic: 10.0382030944255

Mras
type: EnsemblDatabaseReference

Nefm
type: EnsemblDatabaseReference

Rpl3l
type: EnsemblDatabaseReference

Hemk1
type: EnsemblDatabaseReference

1424703_at
type: EFO_0005072
part of: A-AFFY-45

Meg3
type: EnsemblDatabaseReference

Ap1m2 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0
p value: 0.0105254079011495
refers to: Ap1m2
refers to: 1460190_at
t statistic: 6.56088046094747

Scn3a DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5
p value: 0.0214116999812266
refers to: 1439204_at
refers to: Scn3a
t statistic: -5.22562205698319

1442594_at
type: EFO_0005072
part of: A-AFFY-45

1450555_at
type: EFO_0005072
part of: A-AFFY-45

Imp4 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -2.3
p value: 0.00904460264002737
refers to: 1426214_at
refers to: Imp4
t statistic: -6.92350407324974

1421139_a_at
type: EFO_0005072
part of: A-AFFY-45

1429037_at
type: EFO_0005072
part of: A-AFFY-45

1440063_at
type: EFO_0005072
part of: A-AFFY-45

Tex40
type: EnsemblDatabaseReference

1429051_s_at
type: EFO_0005072
part of: A-AFFY-45

Mt1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.6
p value: 3.78983942783464E-4
refers to: Mt1
refers to: 1422557_s_at
t statistic: -15.4381607098402

Cubn DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -2.3
p value: 0.00506998558341163
refers to: Cubn
refers to: 1452270_s_at
t statistic: -8.26449513806156

1435701_at
type: EFO_0005072
part of: A-AFFY-45

Dnmt3b UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1
p value: 0.030774020107041
refers to: 1442655_at
refers to: Dnmt3b
t statistic: 4.61130051512117

1435252_at
type: EFO_0005072
part of: A-AFFY-45

Rhox5
type: EnsemblDatabaseReference

Nedd4
type: EnsemblDatabaseReference

Galc DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4
p value: 0.00242657853079642
refers to: Galc
refers to: 1452907_at
t statistic: -10.2143637063703

Tsix
type: EnsemblDatabaseReference

1439129_at
type: EFO_0005072
part of: A-AFFY-45

Rlbp1
type: EnsemblDatabaseReference

Parp3
type: EnsemblDatabaseReference

Pdlim5
type: EnsemblDatabaseReference

Cep162 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00242657853079642
refers to: Cep162
refers to: 1442733_at
t statistic: -10.1698418107369

1452183_a_at
type: EFO_0005072
part of: A-AFFY-45

1417178_at
type: EFO_0005072
part of: A-AFFY-45

Car6 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.0197961179897285
refers to: Car6
refers to: 1421001_a_at
t statistic: -5.37119463918845

Mapk8
type: EnsemblDatabaseReference

Trim12a
type: EnsemblDatabaseReference

RP24-540G19.3 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2
p value: 0.00386310968949615
refers to: RP24-540G19.3
refers to: 1442153_at
t statistic: 8.93358429771724

1452899_at
type: EFO_0005072
part of: A-AFFY-45

Kifc3
type: EnsemblDatabaseReference

Rnf170
type: EnsemblDatabaseReference

1436285_at
type: EFO_0005072
part of: A-AFFY-45

Meg3 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -2.1
p value: 0.0316476190008924
refers to: Meg3
refers to: 1439380_x_at
t statistic: -4.57388114541565

1422520_at
type: EFO_0005072
part of: A-AFFY-45

1422557_s_at
type: EFO_0005072
part of: A-AFFY-45

1417426_at
type: EFO_0005072
part of: A-AFFY-45

Dab2
type: EnsemblDatabaseReference

1422247_a_at
type: EFO_0005072
part of: A-AFFY-45

1452249_at
type: EFO_0005072
part of: A-AFFY-45

Nupr1
type: EnsemblDatabaseReference

1419152_at
type: EFO_0005072
part of: A-AFFY-45

Ttk
type: EnsemblDatabaseReference

Aoah
type: EnsemblDatabaseReference

1435514_at
type: EFO_0005072
part of: A-AFFY-45

1442655_at
type: EFO_0005072
part of: A-AFFY-45

1440177_at
type: EFO_0005072
part of: A-AFFY-45

Fut10 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.0182640296287341
refers to: Fut10
refers to: 1437388_at
t statistic: -5.49024250783986

Nlrx1
type: EnsemblDatabaseReference

Tfpi
type: EnsemblDatabaseReference

Rian
type: EnsemblDatabaseReference

Dkk1
type: EnsemblDatabaseReference

1442153_at
type: EFO_0005072
part of: A-AFFY-45

Prickle1
type: EnsemblDatabaseReference

Dnmt3b
type: EnsemblDatabaseReference

Cdc23 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.8
p value: 0.00121324745165348
refers to: Cdc23
refers to: 1443087_at
t statistic: 12.1296621385658

Tex40 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.7
p value: 0.00193564197335743
refers to: 1449074_at
refers to: Tex40
t statistic: -11.0391096514979

1417588_at
type: EFO_0005072
part of: A-AFFY-45

Sult6b1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.6
p value: 0.00548269582599552
refers to: 1439759_x_at
refers to: Sult6b1
t statistic: -7.9850001343303

Chic1
type: EnsemblDatabaseReference

1426990_at
type: EFO_0005072
part of: A-AFFY-45

Grik3
type: EnsemblDatabaseReference

Pts
type: EnsemblDatabaseReference

Serpina3m
type: EnsemblDatabaseReference

Sox17
type: EnsemblDatabaseReference

Bcl11a
type: EnsemblDatabaseReference

T
type: EnsemblDatabaseReference

B3galt6
type: EnsemblDatabaseReference

Parp3 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.00541089495354473
refers to: Parp3
refers to: 1451969_s_at
t statistic: -8.03614706444397

Mtus1
type: EnsemblDatabaseReference

Rpl3l DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00660327036203123
refers to: Rpl3l
refers to: 1449398_at
t statistic: -7.54312029187979

Gata6
type: EnsemblDatabaseReference

Ddx3y UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 5.6
p value: 2.79636726402661E-5
refers to: Ddx3y
refers to: 1452077_at
t statistic: 26.5545223413394

Slc7a6
type: EnsemblDatabaseReference

Dkk1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.0235070686386793
refers to: Dkk1
refers to: 1420360_at
t statistic: -5.04293182661193

1428783_at
type: EFO_0005072
part of: A-AFFY-45

Lama3
type: EnsemblDatabaseReference

Adcy7
type: EnsemblDatabaseReference

Fam25c
type: EnsemblDatabaseReference

Tmeff2 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0
p value: 0.0283911727723636
refers to: 1419073_at
refers to: Tmeff2
t statistic: 4.75683916774774

Aass
type: EnsemblDatabaseReference

Gm15698
type: EnsemblDatabaseReference

Zcchc3 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.3
p value: 0.0158790785793783
refers to: Zcchc3
refers to: 1428402_at
t statistic: 5.76745539530722

1434151_at
type: EFO_0005072
part of: A-AFFY-45

AI662270
type: EnsemblDatabaseReference

Rlbp1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3
p value: 0.0285627253020994
refers to: 1418310_a_at
refers to: Rlbp1
t statistic: -4.73759718835209

Sox11 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1
p value: 0.00242657853079642
refers to: Sox11
refers to: 1429051_s_at
t statistic: 10.2214401603988

1455840_at
type: EFO_0005072
part of: A-AFFY-45

Crisp1
type: EnsemblDatabaseReference

Piwil2
type: EnsemblDatabaseReference

1426206_at
type: EFO_0005072
part of: A-AFFY-45

Zcchc3
type: EnsemblDatabaseReference

1443087_at
type: EFO_0005072
part of: A-AFFY-45

Ttc39c
type: EnsemblDatabaseReference

Frmd4b UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.6
p value: 0.0383867136640892
refers to: 1438169_a_at
refers to: Frmd4b
t statistic: 4.28956623164263

1431667_s_at
type: EFO_0005072
part of: A-AFFY-45

Kif5b DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.7
p value: 3.35989340781835E-4
refers to: Kif5b
refers to: 1418429_at
t statistic: -16.1094579090983

Supt7l
type: EnsemblDatabaseReference

Pts DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.0214116999812266
refers to: 1450660_at
refers to: Pts
t statistic: -5.22311836438077

Zeb1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3
p value: 8.06195124763561E-4
refers to: 1418926_at
refers to: Zeb1
t statistic: -13.1635140368849

4930444M15Rik
type: EnsemblDatabaseReference

1421921_at
type: EFO_0005072
part of: A-AFFY-45

Atp7a DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4
p value: 0.00365388221470799
refers to: 1418774_a_at
refers to: Atp7a
t statistic: -9.02273710126935

1425747_at
type: EFO_0005072
part of: A-AFFY-45

Mus musculus
type: OBI_0100026

Stard4
type: EnsemblDatabaseReference

Trim34a
type: EnsemblDatabaseReference

Zfp42 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -2.0
p value: 2.88003323189192E-4
refers to: Zfp42
refers to: 1418362_at
t statistic: -16.8223833725774

1447946_at
type: EFO_0005072
part of: A-AFFY-45

Pdlim5
type: EnsemblDatabaseReference

Atm
type: EnsemblDatabaseReference

1457936_at
type: EFO_0005072
part of: A-AFFY-45

Mpi
type: EnsemblDatabaseReference

1419762_at
type: EFO_0005072
part of: A-AFFY-45

AI662270 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 5.7
p value: 1.33879520131934E-5
refers to: AI662270
refers to: 1434067_at
t statistic: 30.70600286904

1416325_at
type: EFO_0005072
part of: A-AFFY-45

E-GEOD-54931
type: microarray 1colour mrna differential
RO_0002162: Mus musculus
description: SETD2/HYPB has been known as a histone H3K36 specific methyltransferase. However, its roles in physiology such as development and cellular function remain unclear. In this study, using mESCs as cellular model, we show that Setd2 mainly regulates differentiation of murine embryonic stem cells (mESCs) towards primitive endoderm. This study aimed at exploring how did Setd2 regulate primitive endoderm. differentiation. We used microarrays to detail the global programme of gene expression controled by setd2, which is required for endoderm differentiation. Wild type and Setd2 knockout mESCs were selected for RNA extraction and hybridization on Affymetrix GeneChipÃÂ® mouse genome 430 2.0 arrays. We sought to obtain some deregulated genes, which were required for primitive endoderm differentiation. For comparison, three biological repeats of each were performed.
uses data from: http://identifiers.org/pubmed/25242323

B830012L14Rik
type: EnsemblDatabaseReference

Dock5
type: EnsemblDatabaseReference

Mal2
type: EnsemblDatabaseReference

Bbs2
type: EnsemblDatabaseReference

Col4a1
type: EnsemblDatabaseReference

1455421_x_at
type: EFO_0005072
part of: A-AFFY-45

Ccnb1ip1
type: EnsemblDatabaseReference

Rnf170
type: EnsemblDatabaseReference

1429525_s_at
type: EFO_0005072
part of: A-AFFY-45

Atm DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -2.4
p value: 2.01970438606195E-4
refers to: Atm
refers to: 1421205_at
t statistic: -18.3630977160202

A-AFFY-45
type: EFO_0000269

Gm19427
type: EnsemblDatabaseReference

1452968_at
type: EFO_0005072
part of: A-AFFY-45

Rian DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -2.0
p value: 0.0095094883300212
refers to: Rian
refers to: 1452899_at
t statistic: -6.75630731178895

1437019_at
type: EFO_0005072
part of: A-AFFY-45

Paip1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.6
p value: 3.78983942783464E-4
refers to: 1441955_s_at
refers to: Paip1
t statistic: -15.3708746605683

Rpl39l
type: EnsemblDatabaseReference

Adcy7 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3
p value: 0.00242657853079642
refers to: Adcy7
refers to: 1456307_s_at
t statistic: -10.1755622606307

Galnt3
type: EnsemblDatabaseReference

Ubd
type: EnsemblDatabaseReference

Farsa
type: EnsemblDatabaseReference

Ddx3y UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 7.2
p value: 8.3956368006449E-6
refers to: Ddx3y
refers to: 1426438_at
t statistic: 36.3906088193028

Sox11
type: EnsemblDatabaseReference

Frmd4b UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4
p value: 0.0412675827810933
refers to: Frmd4b
refers to: 1452123_s_at
t statistic: 4.16707941346208

Mettl7a1
type: EnsemblDatabaseReference

Eif2s3y
type: EnsemblDatabaseReference

2810417H13Rik
type: EnsemblDatabaseReference

Tmeff2
type: EnsemblDatabaseReference

Srgn DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -2.2
p value: 2.88003323189192E-4
refers to: Srgn
refers to: 1417426_at
t statistic: -16.8516224830695

1451790_a_at
type: EFO_0005072
part of: A-AFFY-45

Ints10 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3
p value: 0.00506850170020503
refers to: Ints10
refers to: 1439712_at
t statistic: -8.28615084087783

Tfpi DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4
p value: 0.00512633264186851
refers to: 1451790_a_at
refers to: Tfpi
t statistic: -8.21498096951698

Meg3 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2
p value: 0.0158790785793783
refers to: Meg3
refers to: 1426758_s_at
t statistic: -5.77520716345996

Chic1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -3.3
p value: 3.53517126312204E-4
refers to: 1439300_at
refers to: Chic1
t statistic: -15.7923272334767

Zfp874a
type: EnsemblDatabaseReference

Pdgfra
type: EnsemblDatabaseReference

1419073_at
type: EFO_0005072
part of: A-AFFY-45

Mras
type: EnsemblDatabaseReference

Nefm
type: EnsemblDatabaseReference

1428942_at
type: EFO_0005072
part of: A-AFFY-45

1454681_at
type: EFO_0005072
part of: A-AFFY-45

Gbp2
type: EnsemblDatabaseReference

Dock5 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2
p value: 0.00942465220449143
refers to: Dock5
refers to: 1425747_at
t statistic: -6.80477278150502

Meg3
type: EnsemblDatabaseReference

Bcl11a
type: EnsemblDatabaseReference

Robo4
type: EnsemblDatabaseReference

Elavl1
type: EnsemblDatabaseReference

Jakmip2 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0
p value: 0.00913643483375418
refers to: 1436552_at
refers to: Jakmip2
t statistic: 6.90560291050115

Tex40
type: EnsemblDatabaseReference

Aste1
type: EnsemblDatabaseReference

Tex13
type: EnsemblDatabaseReference

1424857_a_at
type: EFO_0005072
part of: A-AFFY-45

Fam25c
type: EnsemblDatabaseReference

1429177_x_at
type: EFO_0005072
part of: A-AFFY-45

Rhox5
type: EnsemblDatabaseReference

Nedd4
type: EnsemblDatabaseReference

Rlbp1
type: EnsemblDatabaseReference

(Assay) GSM1326662
type: Assay
has participant: A-AFFY-45

1424336_at
type: EFO_0005072
part of: A-AFFY-45

Aoah UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0
p value: 0.00234549495449037
refers to: Aoah
refers to: 1450764_at
t statistic: 10.4075232356152

Parp3
type: EnsemblDatabaseReference

Gm15698
type: EnsemblDatabaseReference

Tmem40 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1
p value: 0.0108923155091838
refers to: Tmem40
refers to: 1451546_s_at
t statistic: 6.51348465537569

Hemk1 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2
p value: 6.42908134355164E-4
refers to: Hemk1
refers to: 1430287_s_at
t statistic: 14.0916399316861

Tfpi DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5
p value: 0.00575624795044872
refers to: 1451791_at
refers to: Tfpi
t statistic: -7.89370014125655

RP24-540G19.3
type: EnsemblDatabaseReference

1434326_x_at
type: EFO_0005072
part of: A-AFFY-45

AI662270
type: EnsemblDatabaseReference

Robo4 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.6
p value: 0.0052017188854795
refers to: 1426206_at
refers to: Robo4
t statistic: -8.16927509702333

Pdgfra DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4
p value: 0.0161718378857493
refers to: Pdgfra
refers to: 1421917_at
t statistic: -5.73812240634043

Mtus1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.0212017378341013
refers to: Mtus1
refers to: 1436502_at
t statistic: -5.26093393758834

1436552_at
type: EFO_0005072
part of: A-AFFY-45

1429239_a_at
type: EFO_0005072
part of: A-AFFY-45

1456768_a_at
type: EFO_0005072
part of: A-AFFY-45

Uty
type: EnsemblDatabaseReference

Rapgef5
type: EnsemblDatabaseReference

Mapk8
type: EnsemblDatabaseReference

Trim12a
type: EnsemblDatabaseReference

1451791_at
type: EFO_0005072
part of: A-AFFY-45

Srgn
type: EnsemblDatabaseReference

(Sample) organism/Mus musculus
type: Mus musculus
property type: organism
property value: Mus musculus

Ints10
type: EnsemblDatabaseReference

Sult6b1
type: EnsemblDatabaseReference

(Sample) cell type/mouse embryonic stem cell
type: EFO_0004038
property type: cell type
property value: mouse embryonic stem cell

Gm15698 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5
p value: 0.00310219839669947
refers to: Gm15698
refers to: 1439055_at
t statistic: -9.421360396648

Dab2
type: EnsemblDatabaseReference

1416199_at
type: EFO_0005072
part of: A-AFFY-45

Trim34a
type: EnsemblDatabaseReference

Riok3 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.7
p value: 0.00115750815783048
refers to: Riok3
refers to: 1460670_at
t statistic: -12.3212477668439

1449398_at
type: EFO_0005072
part of: A-AFFY-45

1434068_s_at
type: EFO_0005072
part of: A-AFFY-45

Esco1
type: EnsemblDatabaseReference

Imp4
type: EnsemblDatabaseReference

Fgfbp1
type: EnsemblDatabaseReference

1454824_s_at
type: EFO_0005072
part of: A-AFFY-45

Meg3 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -2.0
p value: 0.0250263288947235
refers to: 1452183_a_at
refers to: Meg3
t statistic: -4.94538522327967

Tfpi
type: EnsemblDatabaseReference

Tbx20
type: EnsemblDatabaseReference

Dkk1
type: EnsemblDatabaseReference

Rian
type: EnsemblDatabaseReference

Mpi DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -2.0
p value: 3.12057001474367E-4
refers to: Mpi
refers to: 1451540_at
t statistic: -16.5069771437777

Nlrx1
type: EnsemblDatabaseReference

1421001_a_at
type: EFO_0005072
part of: A-AFFY-45

Frmd4b
type: EnsemblDatabaseReference

1418774_a_at
type: EFO_0005072
part of: A-AFFY-45

1419665_a_at
type: EFO_0005072
part of: A-AFFY-45

Riok3
type: EnsemblDatabaseReference

Dock5
type: EnsemblDatabaseReference

Dnmt3b
type: EnsemblDatabaseReference

Fut10
type: EnsemblDatabaseReference

(Sample) genotype/wild type genotype
type: EFO_0000001
property type: genotype
property value: wild type genotype

1441955_s_at
type: EFO_0005072
part of: A-AFFY-45

Grik3
type: EnsemblDatabaseReference

Cubn
type: EnsemblDatabaseReference

Ccnb1ip1
type: EnsemblDatabaseReference

Dab2 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00756637180176044
refers to: Dab2
refers to: 1420498_a_at
t statistic: -7.3023625283985

Serpina3m
type: EnsemblDatabaseReference

Pts
type: EnsemblDatabaseReference

1436502_at
type: EFO_0005072
part of: A-AFFY-45

B3galt6 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.7
p value: 0.00360898505174111
refers to: B3galt6
refers to: 1435252_at
t statistic: -9.07520273705093

Kifc3 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2
p value: 0.00234549495449037
refers to: 1416199_at
refers to: Kifc3
t statistic: -10.3975185365497

Fam131b UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0
p value: 0.0330068822404806
refers to: 1455421_x_at
refers to: Fam131b
t statistic: 4.52406555630216

1437123_at
type: EFO_0005072
part of: A-AFFY-45

1428402_at
type: EFO_0005072
part of: A-AFFY-45

Cyyr1
type: EnsemblDatabaseReference

1421955_a_at
type: EFO_0005072
part of: A-AFFY-45

T
type: EnsemblDatabaseReference

B3galt6
type: EnsemblDatabaseReference

Ccdc113 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.00545511994476213
refers to: Ccdc113
refers to: 1436285_at
t statistic: -8.00738075545417

Gipc2 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.3
p value: 0.0354190972222004
refers to: 1417178_at
refers to: Gipc2
t statistic: 4.40668866441213

Slc7a6
type: EnsemblDatabaseReference

Fundc2 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5
p value: 0.00244198908309815
refers to: 1460434_at
refers to: Fundc2
t statistic: -10.0302840346163

(Assay) GSM1326661
type: Assay
has participant: A-AFFY-45

Adcy7
type: EnsemblDatabaseReference

Lama3
type: EnsemblDatabaseReference

1452077_at
type: EFO_0005072
part of: A-AFFY-45

(Factor value) GENOTYPE/Setd2 knock out
type: EFO_0000001
property type: GENOTYPE
property value: Setd2 knock out

Prkar2a DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00315666603479548
refers to: Prkar2a
refers to: 1428783_at
t statistic: -9.36625982647307

1439201_at
type: EFO_0005072
part of: A-AFFY-45

1442733_at
type: EFO_0005072
part of: A-AFFY-45

Pdgfra
type: EnsemblDatabaseReference

1426223_at
type: EFO_0005072
part of: A-AFFY-45

Triml1
type: EnsemblDatabaseReference

1456307_s_at
type: EFO_0005072
part of: A-AFFY-45

(Assay) GSM1326665
type: Assay
has participant: A-AFFY-45

Gbp2
type: EnsemblDatabaseReference

Fbp2
type: EnsemblDatabaseReference

Ubd UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4
p value: 0.0096263031929857
refers to: 1419762_at
refers to: Ubd
t statistic: 6.7026168761435

1700019A02Rik
type: EnsemblDatabaseReference

Farsa DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00277103307160997
refers to: Farsa
refers to: 1440063_at
t statistic: -9.6636267788144

Sox17 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5
p value: 0.0174923362205473
refers to: Sox17
refers to: 1429177_x_at
t statistic: -5.56955047419495

1426438_at
type: EFO_0005072
part of: A-AFFY-45

Stard4 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2
p value: 0.00204478727450752
refers to: 1429239_a_at
refers to: Stard4
t statistic: 10.9183683185893

Zcchc3
type: EnsemblDatabaseReference

Supt7l
type: EnsemblDatabaseReference

Tex13
type: EnsemblDatabaseReference

Paip1
type: EnsemblDatabaseReference

1439518_at
type: EFO_0005072
part of: A-AFFY-45

1700042O10Rik
type: EnsemblDatabaseReference

Mid1
type: EnsemblDatabaseReference

1426758_s_at
type: EFO_0005072
part of: A-AFFY-45

Stard4
type: EnsemblDatabaseReference

Atm
type: EnsemblDatabaseReference

Fundc2
type: EnsemblDatabaseReference

Mpi
type: EnsemblDatabaseReference

Zfp42
type: EnsemblDatabaseReference

1441917_s_at
type: EFO_0005072
part of: A-AFFY-45

Bbs2 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.00243344794663846
refers to: Bbs2
refers to: 1424478_at
t statistic: -10.075095523598

1438307_at
type: EFO_0005072
part of: A-AFFY-45

Mmrn2 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -2.1
p value: 0.0140913860347587
refers to: 1456768_a_at
refers to: Mmrn2
t statistic: -6.02383610961369

1440068_at
type: EFO_0005072
part of: A-AFFY-45

(Factor value) GENOTYPE/wild type genotype
type: EFO_0000001
property type: GENOTYPE
property value: wild type genotype

Cdc23
type: EnsemblDatabaseReference

1452337_at
type: EFO_0005072
part of: A-AFFY-45

Rapgef5
type: EnsemblDatabaseReference

Mal2
type: EnsemblDatabaseReference

Cthrc1
type: EnsemblDatabaseReference

1426598_at
type: EFO_0005072
part of: A-AFFY-45

Bbs2
type: EnsemblDatabaseReference

Col4a1
type: EnsemblDatabaseReference

Tmem40 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1
p value: 0.00264665448350322
refers to: Tmem40
refers to: 1441917_s_at
t statistic: 9.76449538156583

1421917_at
type: EFO_0005072
part of: A-AFFY-45

1420498_a_at
type: EFO_0005072
part of: A-AFFY-45

1429783_at
type: EFO_0005072
part of: A-AFFY-45

Mt1
type: EnsemblDatabaseReference

1433374_at
type: EFO_0005072
part of: A-AFFY-45

Car6
type: EnsemblDatabaseReference

1455374_at
type: EFO_0005072
part of: A-AFFY-45

1439759_x_at
type: EFO_0005072
part of: A-AFFY-45

Mapk8 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3
p value: 0.00401266553205845
refers to: Mapk8
refers to: 1457936_at
t statistic: -8.86942101937055

Hmgb2
type: EnsemblDatabaseReference

1451546_s_at
type: EFO_0005072
part of: A-AFFY-45

1435906_x_at
type: EFO_0005072
part of: A-AFFY-45

1421385_a_at
type: EFO_0005072
part of: A-AFFY-45

Farsa
type: EnsemblDatabaseReference

Tceanc2 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2
p value: 0.00506850170020503
refers to: 1418662_at
refers to: Tceanc2
t statistic: -8.29515532064833

Sox11
type: EnsemblDatabaseReference

Mettl7a1
type: EnsemblDatabaseReference

Ppcdc
type: EnsemblDatabaseReference

2810417H13Rik
type: EnsemblDatabaseReference

Atp7a
type: EnsemblDatabaseReference

1439311_at
type: EFO_0005072
part of: A-AFFY-45

Adcy7 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4
p value: 7.87337753200238E-4
refers to: Adcy7
refers to: 1450065_at
t statistic: -13.4277376621523

1439380_x_at
type: EFO_0005072
part of: A-AFFY-45

1449590_a_at
type: EFO_0005072
part of: A-AFFY-45

Mmrn2 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2
p value: 0.00311728209955484
refers to: 1437123_at
refers to: Mmrn2
t statistic: -9.39914941786902

Adam23 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0
p value: 0.00242657853079642
refers to: Adam23
refers to: 1447946_at
t statistic: 10.1335572510541

Bcl11a UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2
p value: 0.040009297770233
refers to: Bcl11a
refers to: 1419406_a_at
t statistic: 4.22893326777985

Yars DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 8.64015167896008E-4
refers to: Yars
refers to: 1444490_at
t statistic: -12.9772725001284

AI662270 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 5.3
p value: 3.99005483219513E-5
refers to: AI662270
refers to: 1434068_s_at
t statistic: 24.8276991685276

Cyyr1
type: EnsemblDatabaseReference

Robo4
type: EnsemblDatabaseReference

Elavl1
type: EnsemblDatabaseReference

2810417H13Rik DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -4.4
p value: 4.96655078189003E-5
refers to: 2810417H13Rik
refers to: 1419152_at
t statistic: -23.7085295015947

Rapgef5 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4
p value: 0.00231215718357458
refers to: Rapgef5
refers to: 1455840_at
t statistic: -10.5397679415804

Mtus1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.0206589114373692
refers to: 1454824_s_at
refers to: Mtus1
t statistic: -5.30024694529452

Galnt3 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1
p value: 0.0397939164864084
refers to: Galnt3
refers to: 1417588_at
t statistic: 4.23703808693738

1452035_at
type: EFO_0005072
part of: A-AFFY-45

Prkar2a
type: EnsemblDatabaseReference

Aste1
type: EnsemblDatabaseReference

Paip1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5
p value: 0.00123778227668559
refers to: Paip1
refers to: 1425521_at
t statistic: -12.0505184155999

Mmrn2
type: EnsemblDatabaseReference

Galc
type: EnsemblDatabaseReference

1424966_at
type: EFO_0005072
part of: A-AFFY-45

1450402_at
type: EFO_0005072
part of: A-AFFY-45

Tex13 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.7
p value: 0.0253416039319468
refers to: Tex13
refers to: 1450555_at
t statistic: 4.93173233271265

1417210_at
type: EFO_0005072
part of: A-AFFY-45

Myo1f
type: EnsemblDatabaseReference

1427512_a_at
type: EFO_0005072
part of: A-AFFY-45

Rnf170 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.0195391498284407
refers to: 1437207_at
refers to: Rnf170
t statistic: -5.39632811282965

Usp14
type: EnsemblDatabaseReference

Col4a1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00581616204159427
refers to: 1452035_at
refers to: Col4a1
t statistic: -7.81365079070626

RP24-540G19.3
type: EnsemblDatabaseReference

Mal2 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2
p value: 0.00277657326000961
refers to: Mal2
refers to: 1427042_at
t statistic: 9.62779764066277

Ddx3y UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 4.9
p value: 6.97505192282068E-5
refers to: 1426439_at
refers to: Ddx3y
t statistic: 22.2846266528263

Mras DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1
p value: 0.00913643483375418
refers to: Mras
refers to: 1449590_a_at
t statistic: -6.90295020755057

Kcnj3 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 2.5
p value: 7.87337753200238E-4
refers to: Kcnj3
refers to: 1455374_at
t statistic: 13.5433289506765

Timmdc1 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1
p value: 0.00879603363818341
refers to: 1420329_at
refers to: Timmdc1
t statistic: 6.99397335678553

Scn3a
type: EnsemblDatabaseReference

Uty
type: EnsemblDatabaseReference

Mmrn2 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00627508944024549
refers to: 1439518_at
refers to: Mmrn2
t statistic: -7.64572764856421

Esrp1
type: EnsemblDatabaseReference

Srgn
type: EnsemblDatabaseReference

Ints10
type: EnsemblDatabaseReference

1700042O10Rik DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.0233566331208199
refers to: 1700042O10Rik
refers to: 1430105_at
t statistic: -5.05660295334421

1700042O10Rik
type: EnsemblDatabaseReference

Sult6b1
type: EnsemblDatabaseReference

1453351_at
type: EFO_0005072
part of: A-AFFY-45

1424478_at
type: EFO_0005072
part of: A-AFFY-45

Rhox5 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3
p value: 0.00739353493462414
refers to: Rhox5
refers to: 1423429_at
t statistic: -7.34062837921751

1425521_at
type: EFO_0005072
part of: A-AFFY-45

Mep1b
type: EnsemblDatabaseReference

Lama3 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.00874413730839609
refers to: Lama3
refers to: 1427512_a_at
t statistic: -7.01890632342891

1419304_at
type: EFO_0005072
part of: A-AFFY-45

Trim34a DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.8
p value: 0.00281110256945892
refers to: Trim34a
refers to: 1424857_a_at
t statistic: -9.59380515995733

Zfp946
type: EnsemblDatabaseReference

Fgfbp1
type: EnsemblDatabaseReference

Esco1
type: EnsemblDatabaseReference

Imp4
type: EnsemblDatabaseReference

Jakmip2
type: EnsemblDatabaseReference

Ddx3y
type: EnsemblDatabaseReference

Elavl1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.0226680958274139
refers to: Elavl1
refers to: 1428653_x_at
t statistic: -5.10090788419511

Tbx20
type: EnsemblDatabaseReference

Frmd4b
type: EnsemblDatabaseReference

Riok3
type: EnsemblDatabaseReference

Kcnj3
type: EnsemblDatabaseReference

Nedd4 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1
p value: 8.06195124763561E-4
refers to: 1421955_a_at
refers to: Nedd4
t statistic: 13.1602122054625

1429690_at
type: EFO_0005072
part of: A-AFFY-45

Fut10
type: EnsemblDatabaseReference

(Sample) strain/129SV/C57BL/6
type: EFO_0000001
property type: strain
property value: 129SV/C57BL/6

1453002_at
type: EFO_0005072
part of: A-AFFY-45

Gipc2
type: EnsemblDatabaseReference

Dock5 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.010176640103717
refers to: Dock5
refers to: 1439129_at
t statistic: -6.61578610969533

Tmem40 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1
p value: 0.013374103119395
refers to: 1424966_at
refers to: Tmem40
t statistic: 6.10179052384168

Nxt2
type: EnsemblDatabaseReference

Myo7a
type: EnsemblDatabaseReference

Cubn
type: EnsemblDatabaseReference

(Assay) GSM1326663
type: Assay
has participant: A-AFFY-45

1448140_at
type: EFO_0005072
part of: A-AFFY-45

1700019A02Rik DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3
p value: 0.0120813825531911
refers to: 1429037_at
refers to: 1700019A02Rik
t statistic: -6.30308681899678

Med1
type: EnsemblDatabaseReference

Crisp1 UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.3
p value: 0.00506998558341163
refers to: Crisp1
refers to: 1416325_at
t statistic: 8.26076677889901

Fgfbp1 DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.0280877850932939
refers to: Fgfbp1
refers to: 1419086_at
t statistic: -4.77638570991339

Car6
type: EnsemblDatabaseReference

1450065_at
type: EFO_0005072
part of: A-AFFY-45

Myo7a DOWN in 'Setd2 knock out' vs 'wild type genotype'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0
p value: 0.0389551314305683
refers to: Myo7a
refers to: 1421385_a_at
t statistic: -4.26982039818582

Zfp874a UP in 'Setd2 knock out' vs 'wild type genotype'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0
p value: 0.00360898505174111
refers to: Zfp874a
refers to: 1434171_at
t statistic: 9.06599997319934

Kif5b
type: EnsemblDatabaseReference

1450764_at
type: EFO_0005072
part of: A-AFFY-45

1450660_at
type: EFO_0005072
part of: A-AFFY-45