Gm21967
type: EnsemblDatabaseReference

(Assay) H_wt2
type: Assay
has participant: A-AFFY-45

Analysis of 'bic knock out' vs 'wild type'
type: MicroarrayDifferentialExpressionAnalysis

Mrpl39 DOWN in 'bic knock out' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.16887358556034
p value: 7.82978554843697E-10
refers to: Mrpl39
refers to: 1448909_a_at
t statistic: -27.3368827585086

Itsn1 UP in 'bic knock out' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.08848496048737
p value: 2.50830192075876E-4
refers to: 1435884_at
refers to: Itsn1
t statistic: 8.15008389686758

Nin
type: EnsemblDatabaseReference

Gsr
type: EnsemblDatabaseReference

Ccl3
type: EnsemblDatabaseReference

1426607_at
type: EFO_0005072
part of: A-AFFY-45

(Assay) H_mir155-2
type: Assay
has participant: A-AFFY-45

Afp
type: EnsemblDatabaseReference

Gm21967 UP in 'bic knock out' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.05495542142348
p value: 6.45838495273224E-4
refers to: 1426607_at
refers to: Gm21967
t statistic: 7.22363960192233

Nin UP in 'bic knock out' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.16032922077088
p value: 1.36630121642056E-5
refers to: Nin
refers to: 1419078_at
t statistic: 11.3137102753376

(Sample) individual/mir155-1
type: EFO_0000001
property type: individual
property value: mir155-1

(Sample) individual/wt1
type: EFO_0000001
property type: individual
property value: wt1

Ccl3
type: EnsemblDatabaseReference

(Assay) H_mir155-3
type: Assay
has participant: A-AFFY-45

Pmaip1 UP in 'bic knock out' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0935081646641
p value: 9.46257785071805E-6
refers to: Pmaip1
refers to: 1418203_at
t statistic: 12.3552306341736

Ccl3 DOWN in 'bic knock out' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.24826748655068
p value: 0.0017290750372603
refers to: 1419561_at
refers to: Ccl3
t statistic: -6.09974378244487

Xist
type: EnsemblDatabaseReference

Xist UP in 'bic knock out' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 5.02692596145414
p value: 2.50015993059851E-5
refers to: 1436936_s_at
refers to: Xist
t statistic: 10.6152633414109

(Sample) individual/wt5
type: EFO_0000001
property type: individual
property value: wt5

(Assay) H_wt1
type: Assay
has participant: A-AFFY-45

1428572_at
type: EFO_0005072
part of: A-AFFY-45

Xist
type: EnsemblDatabaseReference

1424749_at
type: EFO_0005072
part of: A-AFFY-45

Basp1 UP in 'bic knock out' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03282202591723
p value: 7.9009997830351E-4
refers to: 1428572_at
refers to: Basp1
t statistic: 7.00793757919811

(Sample) individual/mir155-5
type: EFO_0000001
property type: individual
property value: mir155-5

E-MEXP-1325
type: microarray 1colour mrna differential
RO_0002162: Mus musculus
description: Wild type or miR-155 deficient b cells from 5 individuals each were stimulated with LPS and IL4 for 24hs and profiled.
uses data from: http://identifiers.org/pubmed/18055230

Itsn1
type: EnsemblDatabaseReference

4930453N24Rik
type: EnsemblDatabaseReference

(Assay) H_mir155-1
type: Assay
has participant: A-AFFY-45

(Sample) individual/mir155-3
type: EFO_0000001
property type: individual
property value: mir155-3

(Assay) H_mir155-4
type: Assay
has participant: A-AFFY-45

1437358_at
type: EFO_0005072
part of: A-AFFY-45

1435884_at
type: EFO_0005072
part of: A-AFFY-45

1419561_at
type: EFO_0005072
part of: A-AFFY-45

4930453N24Rik
type: EnsemblDatabaseReference

Nin
type: EnsemblDatabaseReference

4930453N24Rik UP in 'bic knock out' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14232561631684
p value: 8.81517021805664E-4
refers to: 4930453N24Rik
refers to: 1438553_x_at
t statistic: 6.89393364202623

Xist UP in 'bic knock out' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 3.58389151236313
p value: 9.43171157271435E-4
refers to: Xist
refers to: 1427262_at
t statistic: 6.82108181135215

1419078_at
type: EFO_0005072
part of: A-AFFY-45

(Sample) genotype/bic knock out
type: EFO_0000001
property type: genotype
property value: bic knock out

Mus musculus
type: OBI_0100026

Basp1
type: EnsemblDatabaseReference

(Sample) individual/mir155-2
type: EFO_0000001
property type: individual
property value: mir155-2

1417966_at
type: EFO_0005072
part of: A-AFFY-45

Ptgir
type: EnsemblDatabaseReference

Jarid2
type: EnsemblDatabaseReference

1421816_at
type: EFO_0005072
part of: A-AFFY-45

Ptgir
type: EnsemblDatabaseReference

(Sample) genetic modification/gene knock out
type: EFO_0000506
property type: genetic modification
property value: gene knock out

1450710_at
type: EFO_0005072
part of: A-AFFY-45

1448909_a_at
type: EFO_0005072
part of: A-AFFY-45

Mrpl39 DOWN in 'bic knock out' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.04517381704636
p value: 7.82978554843697E-10
refers to: Mrpl39
refers to: 1417966_at
t statistic: -26.7865495383911

Ptgir UP in 'bic knock out' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0404264914382
p value: 0.00106984259499235
refers to: Ptgir
refers to: 1427313_at
t statistic: 6.65187313731636

Wdfy1
type: EnsemblDatabaseReference

(Sample) genotype/wild type genotype
type: EFO_0000001
property type: genotype
property value: wild type genotype

Itsn1
type: EnsemblDatabaseReference

Gsr UP in 'bic knock out' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0315466075078
p value: 1.18804714796211E-5
refers to: Gsr
refers to: 1421816_at
t statistic: 11.5965757454101

Mrpl39
type: EnsemblDatabaseReference

1416645_a_at
type: EFO_0005072
part of: A-AFFY-45

Pmaip1
type: EnsemblDatabaseReference

1427313_at
type: EFO_0005072
part of: A-AFFY-45

Wdfy1
type: EnsemblDatabaseReference

1436936_s_at
type: EFO_0005072
part of: A-AFFY-45

Wdfy1 DOWN in 'bic knock out' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01381513830035
p value: 0.00140611373481321
refers to: Wdfy1
refers to: 1424749_at
t statistic: -6.34167134824866

Jarid2 UP in 'bic knock out' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.25819308652238
p value: 7.42128233814546E-7
refers to: Jarid2
refers to: 1422697_s_at
t statistic: 15.5745283822193

(Factor value) GENOTYPE/wild type genotype
type: EFO_0000001
property type: GENOTYPE
property value: wild type genotype

1427262_at
type: EFO_0005072
part of: A-AFFY-45

Afp UP in 'bic knock out' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21336324119527
p value: 7.21913692177183E-4
refers to: Afp
refers to: 1416645_a_at
t statistic: 7.10109305895003

1418203_at
type: EFO_0005072
part of: A-AFFY-45

Wdfy1 DOWN in 'bic knock out' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.37240978664376
p value: 0.00768395286434249
refers to: Wdfy1
refers to: 1435588_at
t statistic: -4.8898530312444

(Assay) H_wt4
type: Assay
has participant: A-AFFY-45

(Sample) individual/wt3
type: EFO_0000001
property type: individual
property value: wt3

Basp1
type: EnsemblDatabaseReference

Gm21967
type: EnsemblDatabaseReference

(Sample) individual/mir155-4
type: EFO_0000001
property type: individual
property value: mir155-4

(Factor value) GENOTYPE/bic knock out
type: EFO_0000001
property type: GENOTYPE
property value: bic knock out

Jarid2
type: EnsemblDatabaseReference

Gsr
type: EnsemblDatabaseReference

1435588_at
type: EFO_0005072
part of: A-AFFY-45

Afp
type: EnsemblDatabaseReference

1422697_s_at
type: EFO_0005072
part of: A-AFFY-45

(Sample) cell type/B cell
type: CL_0000236
property type: cell type
property value: B cell

(Sample) strain/C57BL/6
type: EFO_0004472
property type: strain
property value: C57BL/6

(Sample) individual/wt2
type: EFO_0000001
property type: individual
property value: wt2

(Sample) organism/Mus musculus
type: Mus musculus
property type: organism
property value: Mus musculus

(Sample) individual/wt4
type: EFO_0000001
property type: individual
property value: wt4

1438553_x_at
type: EFO_0005072
part of: A-AFFY-45

(Assay) H_mir155-5
type: Assay
has participant: A-AFFY-45

Jarid2 UP in 'bic knock out' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10846754364064
p value: 1.18804714796211E-5
refers to: Jarid2
refers to: 1450710_at
t statistic: 11.5570396800167

(Assay) H_wt5
type: Assay
has participant: A-AFFY-45

Mrpl39
type: EnsemblDatabaseReference

Pmaip1
type: EnsemblDatabaseReference

(Sample) disease/normal
type: EFO_0000761
property type: disease
property value: normal

(Assay) H_wt3
type: Assay
has participant: A-AFFY-45

Wdfy1 DOWN in 'bic knock out' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.05632135316539
p value: 0.00678399263922999
refers to: Wdfy1
refers to: 1437358_at
t statistic: -4.97805878469321

A-AFFY-45
type: EFO_0000269