RELN
type: EnsemblDatabaseReference

IER3
type: EnsemblDatabaseReference

RELN
type: EnsemblDatabaseReference

(Factor value) COMPOUND/none
type: EFO_0001461
property type: COMPOUND
property value: none

HAS2
type: EnsemblDatabaseReference

IFFO1
type: EnsemblDatabaseReference

HAS2
type: EnsemblDatabaseReference

IFFO1
type: EnsemblDatabaseReference

RAB38
type: EnsemblDatabaseReference

Analysis of 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: MicroarrayDifferentialExpressionAnalysis

BHLHE41
type: EnsemblDatabaseReference

205923_at
type: EFO_0005072
part of: A-AFFY-33

IER3 DOWN in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0151678138744
p value: 0.0301045120939497
refers to: IER3
refers to: 201631_s_at
t statistic: -6.18042203794227

PTHLH DOWN in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: DecreasedDifferentialExpressionRatio
fold change: -1.67320100956964
p value: 0.0415877421176073
refers to: PTHLH
refers to: 206300_s_at
t statistic: -5.52023279053251

206432_at
type: EFO_0005072
part of: A-AFFY-33

208763_s_at
type: EFO_0005072
part of: A-AFFY-33

(Sample) cell line/T24
type: EFO_0002864
property type: cell line
property value: T24

(Assay) H_U133A ctrl_PD16-2
type: Assay
identifier: H_U133A ctrl_PD16-2
has participant: A-AFFY-33

(Factor value) IRRADIATE/light irradiation 4 joules per square centimeter
type: EFO_0000001
property type: IRRADIATE
property value: light irradiation 4 joules per square centimeter

(Sample) organism/Homo sapiens
type: Homo sapiens
property type: organism
property value: Homo sapiens

TNFRSF11B DOWN in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: DecreasedDifferentialExpressionRatio
fold change: -2.38898946341889
p value: 0.0152734716626369
refers to: 204932_at
refers to: TNFRSF11B
t statistic: -7.70665424685546

ABCA1
type: EnsemblDatabaseReference

ABCA1 DOWN in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: DecreasedDifferentialExpressionRatio
fold change: -1.20828518875059
p value: 0.0284477681698194
refers to: ABCA1
refers to: 203504_s_at
t statistic: -6.30300488101338

AKR1C3 DOWN in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03699189400097
p value: 0.0387798508988043
refers to: AKR1C3
refers to: 209160_at
t statistic: -5.68141408825225

201631_s_at
type: EFO_0005072
part of: A-AFFY-33

(Assay) H_U133A ctrl_PD16-4
type: Assay
identifier: H_U133A ctrl_PD16-4
has participant: A-AFFY-33

(Assay) H_U133A 7h AI_PD16-1
type: Assay
identifier: H_U133A 7h AI_PD16-1
has participant: A-AFFY-33

205681_at
type: EFO_0005072
part of: A-AFFY-33

E-MEXP-1220
type: microarray 1colour mrna differential
RO_0002162: Homo sapiens
description: Study of the gene expression of T24 bladder cancer cells in response to hypericin-mediated photodynamic therapy in the absence or presence of the p38 MAPK inhibitor PD169316
uses data from: http://identifiers.org/pubmed/17952126

205034_at
type: EFO_0005072
part of: A-AFFY-33

221530_s_at
type: EFO_0005072
part of: A-AFFY-33

(Assay) H_U133A ctrl-1
type: Assay
identifier: H_U133A ctrl-1
has participant: A-AFFY-33

209160_at
type: EFO_0005072
part of: A-AFFY-33

TSC22D3
type: EnsemblDatabaseReference

TSC22D3
type: EnsemblDatabaseReference

CSF2 DOWN in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: DecreasedDifferentialExpressionRatio
fold change: -1.66507564579974
p value: 0.033956094971141
refers to: CSF2
refers to: 210229_s_at
t statistic: -5.91297785214759

(Factor value) IRRADIATE/none
type: EFO_0001461
property type: IRRADIATE
property value: none

TRIM2
type: EnsemblDatabaseReference

(Assay) H_U133A 7h AI-2
type: Assay
identifier: H_U133A 7h AI-2
has participant: A-AFFY-33

RAB38
type: EnsemblDatabaseReference

203504_s_at
type: EFO_0005072
part of: A-AFFY-33

(Assay) H_U133A ctrl-3
type: Assay
identifier: H_U133A ctrl-3
has participant: A-AFFY-33

BCL2A1 UP in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: IncreasedDifferentialExpressionRatio
fold change: 1.36503554848835
p value: 0.0489307483901075
refers to: BCL2A1
refers to: 205681_at
t statistic: 5.23688303056636

(Assay) H_U133A 7h AI-4
type: Assay
identifier: H_U133A 7h AI-4
has participant: A-AFFY-33

MMP3 DOWN in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: DecreasedDifferentialExpressionRatio
fold change: -1.19800592158664
p value: 0.0316185097512931
refers to: 205828_at
refers to: MMP3
t statistic: -6.05167757813943

213139_at
type: EFO_0005072
part of: A-AFFY-33

ABCA1
type: EnsemblDatabaseReference

(Assay) H_U133A 7h AI_PD16-4
type: Assay
identifier: H_U133A 7h AI_PD16-4
has participant: A-AFFY-33

213112_s_at
type: EFO_0005072
part of: A-AFFY-33

205959_at
type: EFO_0005072
part of: A-AFFY-33

BCL2A1
type: EnsemblDatabaseReference

BCL2A1
type: EnsemblDatabaseReference

219412_at
type: EFO_0005072
part of: A-AFFY-33

SQSTM1
type: EnsemblDatabaseReference

PTHLH
type: EnsemblDatabaseReference

SQSTM1
type: EnsemblDatabaseReference

(Assay) H_U133A ctrl_PD16-1
type: Assay
identifier: H_U133A ctrl_PD16-1
has participant: A-AFFY-33

206300_s_at
type: EFO_0005072
part of: A-AFFY-33

205931_s_at
type: EFO_0005072
part of: A-AFFY-33

Homo sapiens
type: OBI_0100026

MMP13
type: EnsemblDatabaseReference

(Assay) H_U133A 7h AI-1
type: Assay
identifier: H_U133A 7h AI-1
has participant: A-AFFY-33

ATXN1 UP in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09305448279336
p value: 0.0271239892566447
refers to: ATXN1
refers to: 203232_s_at
t statistic: 6.37623388248223

210229_s_at
type: EFO_0005072
part of: A-AFFY-33

203232_s_at
type: EFO_0005072
part of: A-AFFY-33

36030_at
type: EFO_0005072
part of: A-AFFY-33

RAB38 UP in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: IncreasedDifferentialExpressionRatio
fold change: 1.26879871664922
p value: 0.00247129481316026
refers to: 219412_at
refers to: RAB38
t statistic: 12.6886706789256

205828_at
type: EFO_0005072
part of: A-AFFY-33

202342_s_at
type: EFO_0005072
part of: A-AFFY-33

TNFRSF11B
type: EnsemblDatabaseReference

BHLHE41 UP in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: IncreasedDifferentialExpressionRatio
fold change: 1.50272224176593
p value: 0.00696220785789145
refers to: 221530_s_at
refers to: BHLHE41
t statistic: 10.3534412230265

CSF2
type: EnsemblDatabaseReference

TSC22D3 UP in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: IncreasedDifferentialExpressionRatio
fold change: 1.00606207284431
p value: 0.0152734716626369
refers to: TSC22D3
refers to: 208763_s_at
t statistic: 7.64037963951439

CCNE2 DOWN in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: DecreasedDifferentialExpressionRatio
fold change: -1.09021153794442
p value: 0.0387798508988043
refers to: 205034_at
refers to: CCNE2
t statistic: -5.69217454227557

(Assay) H_U133A ctrl_PD16-3
type: Assay
identifier: H_U133A ctrl_PD16-3
has participant: A-AFFY-33

ATXN1
type: EnsemblDatabaseReference

(Factor value) COMPOUND/PD169316
type: EFO_0000001
property type: COMPOUND
property value: PD169316

ATXN1
type: EnsemblDatabaseReference

(Assay) H_U133A ctrl-2
type: Assay
identifier: H_U133A ctrl-2
has participant: A-AFFY-33

204932_at
type: EFO_0005072
part of: A-AFFY-33

PTHLH
type: EnsemblDatabaseReference

MMP13 DOWN in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: DecreasedDifferentialExpressionRatio
fold change: -1.89508457044123
p value: 0.0316185097512931
refers to: MMP13
refers to: 205959_at
t statistic: -6.01839832478584

CREB5 UP in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: IncreasedDifferentialExpressionRatio
fold change: 1.63070033638352
p value: 0.018040985204525
refers to: CREB5
refers to: 205931_s_at
t statistic: 7.31960673650127

CCNE2
type: EnsemblDatabaseReference

CCNE2
type: EnsemblDatabaseReference

MMP13
type: EnsemblDatabaseReference

SQSTM1 DOWN in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22514346946993
p value: 0.0201125720349025
refers to: SQSTM1
refers to: 213112_s_at
t statistic: -6.78554107441872

(Assay) H_U133A 7h AI_PD16-2
type: Assay
identifier: H_U133A 7h AI_PD16-2
has participant: A-AFFY-33

SNAI2
type: EnsemblDatabaseReference

SNAI2
type: EnsemblDatabaseReference

IER3
type: EnsemblDatabaseReference

AKR1C3
type: EnsemblDatabaseReference

IFFO1 UP in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02031159937702
p value: 0.0353994547575162
refers to: 36030_at
refers to: IFFO1
t statistic: 5.81372766667546

AKR1C3
type: EnsemblDatabaseReference

A-AFFY-33
type: EFO_0000269

BHLHE41
type: EnsemblDatabaseReference

MMP3
type: EnsemblDatabaseReference

RELN DOWN in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: DecreasedDifferentialExpressionRatio
fold change: -1.76622565802086
p value: 0.0131477334321795
refers to: 205923_at
refers to: RELN
t statistic: -8.48736620749895

MMP3
type: EnsemblDatabaseReference

TNFRSF11B
type: EnsemblDatabaseReference

CSF2
type: EnsemblDatabaseReference

(Sample) cell type/transitional bladder cell carcinoma cell
type: EFO_0000001
property type: cell type
property value: transitional bladder cell carcinoma cell

(Assay) H_U133A 7h AI_PD16-3
type: Assay
identifier: H_U133A 7h AI_PD16-3
has participant: A-AFFY-33

(Assay) H_U133A ctrl-4
type: Assay
identifier: H_U133A ctrl-4
has participant: A-AFFY-33

(Assay) H_U133A 7h AI-3
type: Assay
identifier: H_U133A 7h AI-3
has participant: A-AFFY-33

SNAI2 UP in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: IncreasedDifferentialExpressionRatio
fold change: 1.34377963443778
p value: 0.01117696979436
refers to: 213139_at
refers to: SNAI2
t statistic: 8.99648900889721

HAS2 DOWN in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: DecreasedDifferentialExpressionRatio
fold change: -1.48592173892089
p value: 0.0180690999065598
refers to: HAS2
refers to: 206432_at
t statistic: -7.24925744994232

(Sample) specimen with known storage state/frozen specimen
type: OBI_0000922
property type: specimen with known storage state
property value: frozen specimen

CREB5
type: EnsemblDatabaseReference

CREB5
type: EnsemblDatabaseReference

TRIM2 UP in 'PD169316' vs 'none' in 'light irradiation 4 joules per square centimeter'
type: IncreasedDifferentialExpressionRatio
fold change: 1.24098140094807
p value: 0.0131477334321795
refers to: TRIM2
refers to: 202342_s_at
t statistic: 8.32160272581413

TRIM2
type: EnsemblDatabaseReference