Tmpo UP in 'aire knock out' vs 'wild type'
Antxr2 UP in 'aire knock out' vs 'wild type'
Has2 UP in 'aire knock out' vs 'wild type'
Il9 DOWN in 'aire knock out' vs 'wild type'
Pip5k1b UP in 'aire knock out' vs 'wild type'
Arg2 UP in 'aire knock out' vs 'wild type'
Fxyd3 DOWN in 'aire knock out' vs 'wild type'
Gsta2 DOWN in 'aire knock out' vs 'wild type'
Ryr3 UP in 'aire knock out' vs 'wild type'
Pgm2 UP in 'aire knock out' vs 'wild type'
Crct1 DOWN in 'aire knock out' vs 'wild type'
Analysis of 'aire knock out' vs 'wild type'
Igfbp5 DOWN in 'aire knock out' vs 'wild type'
Cds2 UP in 'aire knock out' vs 'wild type'
Stac UP in 'aire knock out' vs 'wild type'
Vnn1 DOWN in 'aire knock out' vs 'wild type'
Nav2 DOWN in 'aire knock out' vs 'wild type'
Mcpt2 DOWN in 'aire knock out' vs 'wild type'
Zdhhc14 UP in 'aire knock out' vs 'wild type'
Hp DOWN in 'aire knock out' vs 'wild type'
Fabp2 DOWN in 'aire knock out' vs 'wild type'
Igf1 DOWN in 'aire knock out' vs 'wild type'
Klf5 DOWN in 'aire knock out' vs 'wild type'
Npc2 UP in 'aire knock out' vs 'wild type'
S100a8 DOWN in 'aire knock out' vs 'wild type'
H2-Ob UP in 'aire knock out' vs 'wild type'
Cyth3 UP in 'aire knock out' vs 'wild type'
Ifih1 DOWN in 'aire knock out' vs 'wild type'
Hal UP in 'aire knock out' vs 'wild type'
Polg2 UP in 'aire knock out' vs 'wild type'
Tac1 DOWN in 'aire knock out' vs 'wild type'
1100001G20Rik DOWN in 'aire knock out' vs 'wild type'
Hck DOWN in 'aire knock out' vs 'wild type'
Socs2 DOWN in 'aire knock out' vs 'wild type'
Nup85 UP in 'aire knock out' vs 'wild type'
Pomc DOWN in 'aire knock out' vs 'wild type'
Cps1 DOWN in 'aire knock out' vs 'wild type'
Cyp1a2 DOWN in 'aire knock out' vs 'wild type'
Chgb DOWN in 'aire knock out' vs 'wild type'
Ccl25 UP in 'aire knock out' vs 'wild type'
Kitl UP in 'aire knock out' vs 'wild type'
Reg3g DOWN in 'aire knock out' vs 'wild type'
Csn1s2a DOWN in 'aire knock out' vs 'wild type'
Camp DOWN in 'aire knock out' vs 'wild type'
Mccc1 UP in 'aire knock out' vs 'wild type'
Hspb11 UP in 'aire knock out' vs 'wild type'
Aire UP in 'aire knock out' vs 'wild type'
Col14a1 UP in 'aire knock out' vs 'wild type'
Iapp DOWN in 'aire knock out' vs 'wild type'
S100a4 UP in 'aire knock out' vs 'wild type'
Mt1 UP in 'aire knock out' vs 'wild type'
Gstm1 DOWN in 'aire knock out' vs 'wild type'
Muc13 DOWN in 'aire knock out' vs 'wild type'
Cdkn1c DOWN in 'aire knock out' vs 'wild type'
Grem2 UP in 'aire knock out' vs 'wild type'
Dph5 UP in 'aire knock out' vs 'wild type'
(Sample) cell type/meduallary thymic epithelial cell
Sephs2 UP in 'aire knock out' vs 'wild type'
Marc2 UP in 'aire knock out' vs 'wild type'
Maoa UP in 'aire knock out' vs 'wild type'
Cd14 DOWN in 'aire knock out' vs 'wild type'
Pitpnc1 UP in 'aire knock out' vs 'wild type'
Ltf DOWN in 'aire knock out' vs 'wild type'
Ins1 DOWN in 'aire knock out' vs 'wild type'
Ppy DOWN in 'aire knock out' vs 'wild type'
Apoa1 DOWN in 'aire knock out' vs 'wild type'
Amelx DOWN in 'aire knock out' vs 'wild type'
Atp2a3 DOWN in 'aire knock out' vs 'wild type'
Ly9 UP in 'aire knock out' vs 'wild type'
Rad50 UP in 'aire knock out' vs 'wild type'
Npnt UP in 'aire knock out' vs 'wild type'
H19 DOWN in 'aire knock out' vs 'wild type'
Saa3 DOWN in 'aire knock out' vs 'wild type'
Ctrb1 DOWN in 'aire knock out' vs 'wild type'
Slc12a2 DOWN in 'aire knock out' vs 'wild type'
Mlph DOWN in 'aire knock out' vs 'wild type'
Mup3 DOWN in 'aire knock out' vs 'wild type'
Bax UP in 'aire knock out' vs 'wild type'
Cyp26a1 UP in 'aire knock out' vs 'wild type'
Pglyrp1 DOWN in 'aire knock out' vs 'wild type'
Ang5 DOWN in 'aire knock out' vs 'wild type'
Mlf1 DOWN in 'aire knock out' vs 'wild type'
Il4 UP in 'aire knock out' vs 'wild type'
Gip DOWN in 'aire knock out' vs 'wild type'
Usp15 UP in 'aire knock out' vs 'wild type'
Acta2 DOWN in 'aire knock out' vs 'wild type'
H2afx DOWN in 'aire knock out' vs 'wild type'
Ing1 UP in 'aire knock out' vs 'wild type'
Fam107b UP in 'aire knock out' vs 'wild type'
Sprr1a DOWN in 'aire knock out' vs 'wild type'
Hsd17b11 DOWN in 'aire knock out' vs 'wild type'
Fgg DOWN in 'aire knock out' vs 'wild type'
Mt4 DOWN in 'aire knock out' vs 'wild type'
Fmo1 DOWN in 'aire knock out' vs 'wild type'
S100a3 UP in 'aire knock out' vs 'wild type'
Aebp2 UP in 'aire knock out' vs 'wild type'
Mup4 DOWN in 'aire knock out' vs 'wild type'
Plac8 DOWN in 'aire knock out' vs 'wild type'
Zp2 UP in 'aire knock out' vs 'wild type'
Reg3b DOWN in 'aire knock out' vs 'wild type'
Scd1 DOWN in 'aire knock out' vs 'wild type'
Ctla4 UP in 'aire knock out' vs 'wild type'
Npl DOWN in 'aire knock out' vs 'wild type'
Shroom3 DOWN in 'aire knock out' vs 'wild type'
Il12a UP in 'aire knock out' vs 'wild type'
Hagh UP in 'aire knock out' vs 'wild type'
Hbb-y DOWN in 'aire knock out' vs 'wild type'
Fabp1 DOWN in 'aire knock out' vs 'wild type'
Tspo UP in 'aire knock out' vs 'wild type'
Sox2 DOWN in 'aire knock out' vs 'wild type'
Kpna3 UP in 'aire knock out' vs 'wild type'
Cdca7l UP in 'aire knock out' vs 'wild type'
S100a6 UP in 'aire knock out' vs 'wild type'
Sprr1b DOWN in 'aire knock out' vs 'wild type'
S100a9 DOWN in 'aire knock out' vs 'wild type'
Tac2 DOWN in 'aire knock out' vs 'wild type'
Tph1 UP in 'aire knock out' vs 'wild type'
Gstm5 DOWN in 'aire knock out' vs 'wild type'
Erv3 UP in 'aire knock out' vs 'wild type'
Sprr2f DOWN in 'aire knock out' vs 'wild type'
Plet1 DOWN in 'aire knock out' vs 'wild type'
Krt4 DOWN in 'aire knock out' vs 'wild type'
Wfdc18 DOWN in 'aire knock out' vs 'wild type'
Mrpl13 UP in 'aire knock out' vs 'wild type'
Clip4 UP in 'aire knock out' vs 'wild type'
Ndnl2 UP in 'aire knock out' vs 'wild type'
Khdc1b DOWN in 'aire knock out' vs 'wild type'
Stat3 UP in 'aire knock out' vs 'wild type'
Cyp2b19 DOWN in 'aire knock out' vs 'wild type'
Penk DOWN in 'aire knock out' vs 'wild type'
Irf8 UP in 'aire knock out' vs 'wild type'
Cd52 UP in 'aire knock out' vs 'wild type'
Gstm3 DOWN in 'aire knock out' vs 'wild type'
Tkt UP in 'aire knock out' vs 'wild type'
Ins2 DOWN in 'aire knock out' vs 'wild type'
Snap91 UP in 'aire knock out' vs 'wild type'
Txndc16 DOWN in 'aire knock out' vs 'wild type'
Gatm DOWN in 'aire knock out' vs 'wild type'
Sec61b UP in 'aire knock out' vs 'wild type'
Tfpi UP in 'aire knock out' vs 'wild type'
Prps1 UP in 'aire knock out' vs 'wild type'
Ptgds DOWN in 'aire knock out' vs 'wild type'
Tuba1a DOWN in 'aire knock out' vs 'wild type'
Tff3 DOWN in 'aire knock out' vs 'wild type'
Hopx DOWN in 'aire knock out' vs 'wild type'
Gphn UP in 'aire knock out' vs 'wild type'
Anxa10 UP in 'aire knock out' vs 'wild type'
Nsg2 UP in 'aire knock out' vs 'wild type'
Spt1 DOWN in 'aire knock out' vs 'wild type'
(Factor value) GENOTYPE/wild type genotype
Cbx6 DOWN in 'aire knock out' vs 'wild type'
Il1rn UP in 'aire knock out' vs 'wild type'
Calml4 DOWN in 'aire knock out' vs 'wild type'
Fam46c UP in 'aire knock out' vs 'wild type'
Scgb1a1 DOWN in 'aire knock out' vs 'wild type'
Tacstd2 DOWN in 'aire knock out' vs 'wild type'
Spp1 DOWN in 'aire knock out' vs 'wild type'
Csn1s1 DOWN in 'aire knock out' vs 'wild type'
Pkia UP in 'aire knock out' vs 'wild type'
Gpx3 DOWN in 'aire knock out' vs 'wild type'
Rsad2 DOWN in 'aire knock out' vs 'wild type'
Il15 UP in 'aire knock out' vs 'wild type'
Nppb DOWN in 'aire knock out' vs 'wild type'
Ambp DOWN in 'aire knock out' vs 'wild type'
Use1 UP in 'aire knock out' vs 'wild type'
Nsmce1 UP in 'aire knock out' vs 'wild type'
Ccr6 UP in 'aire knock out' vs 'wild type'
Tbx15 UP in 'aire knock out' vs 'wild type'
Ank UP in 'aire knock out' vs 'wild type'
Enpp2 DOWN in 'aire knock out' vs 'wild type'
Uox DOWN in 'aire knock out' vs 'wild type'
1300017J02Rik UP in 'aire knock out' vs 'wild type'
Hk2 UP in 'aire knock out' vs 'wild type'
S100a10 DOWN in 'aire knock out' vs 'wild type'
Igf2 DOWN in 'aire knock out' vs 'wild type'
Cd68 UP in 'aire knock out' vs 'wild type'
Ccl5 DOWN in 'aire knock out' vs 'wild type'
Mice used were B6/129 F2's, 3-5 weeks of age, either wild type or with both copies of the autoimmune regulator gene (aire, GenBank #AF079536) disrupted. Thymi from five of these mice of both sexes were removed and pooled. After collagenase/dispase digestion, density gradient fractionation, and fluorescent antibody staining, cells with the phenotype CD45-, G8.8+, CDR1int and B7.1hi were FACS-sorted and total RNA was made from them. RNA was twice-amplified using a T7 polymerase-based method.
Dtx2 UP in 'aire knock out' vs 'wild type'