JMJD6 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01830930338312
p value: 0.0210517302653547
refers to: 215233_at
refers to: JMJD6
t statistic: 4.43549635424037

GAS1 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0946426228415
p value: 0.00868924515469801
refers to: 204457_s_at
refers to: GAS1
t statistic: 6.2760870842465

PPP4R2 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.07422807310791
p value: 0.0150569323031312
refers to: 226317_at
refers to: PPP4R2
t statistic: 4.75555942601917

(Assay) Substantia nigra normal rep7
type: Assay
identifier: Substantia nigra normal rep7
has participant: A-AFFY-44

GATS
type: EnsemblDatabaseReference

HSPA1B
type: EnsemblDatabaseReference

227062_at
type: EFO_0005072
part of: A-AFFY-44

(Assay) Substantia nigra normal rep1
type: Assay
identifier: Substantia nigra normal rep1
has participant: A-AFFY-44

(Assay) Substantia nigra PD rep10
type: Assay
identifier: Substantia nigra PD rep10
has participant: A-AFFY-44

SV2C DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.8678137489476
p value: 0.020093725162708
refers to: SV2C
refers to: 242530_at
t statistic: -4.48614432213922

1556096_s_at
type: EFO_0005072
part of: A-AFFY-44

CDH8
type: EnsemblDatabaseReference

DDC
type: EnsemblDatabaseReference

RELN
type: EnsemblDatabaseReference

TH DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.89602074650304
p value: 0.0162208282202341
refers to: TH
refers to: 208291_s_at
t statistic: -4.65448112836101

(Assay) Substantia nigra PD rep13
type: Assay
identifier: Substantia nigra PD rep13
has participant: A-AFFY-44

ANKRD29 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.36093855748876
p value: 0.0496630140756168
refers to: ANKRD29
refers to: 238332_at
t statistic: -3.58096321039866

NUP93
type: EnsemblDatabaseReference

1552388_at
type: EFO_0005072
part of: A-AFFY-44

SLC10A4
type: EnsemblDatabaseReference

SV2C
type: EnsemblDatabaseReference

NEAT1
type: EnsemblDatabaseReference

C21orf37
type: EnsemblDatabaseReference

DDC DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.49213219181969
p value: 0.0227317933056888
refers to: DDC
refers to: 205311_at
t statistic: -4.32602464215884

SLC6A3
type: EnsemblDatabaseReference

205857_at
type: EFO_0005072
part of: A-AFFY-44

214841_at
type: EFO_0005072
part of: A-AFFY-44

244745_at
type: EFO_0005072
part of: A-AFFY-44

238332_at
type: EFO_0005072
part of: A-AFFY-44

AGTR1
type: EnsemblDatabaseReference

TMEM255A
type: EnsemblDatabaseReference

RSPO2
type: EnsemblDatabaseReference

(Assay) Substantia nigra PD rep14
type: Assay
identifier: Substantia nigra PD rep14
has participant: A-AFFY-44

TH
type: EnsemblDatabaseReference

GATS DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0691171175849
p value: 0.0099501914146596
refers to: GATS
refers to: 227321_at
t statistic: -5.76089755106187

AGTR1 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.14003329787778
p value: 0.00996908153220354
refers to: AGTR1
refers to: 205357_s_at
t statistic: -5.32090098490321

KLHL1
type: EnsemblDatabaseReference

Analysis of 'Parkinson's disease' vs 'none'
type: MicroarrayDifferentialExpressionAnalysis

NEAT1 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.19145477727657
p value: 0.0415986617513433
refers to: NEAT1
refers to: 225239_at
t statistic: 3.7935910382145

SLCO4A1
type: EnsemblDatabaseReference

THAP2
type: EnsemblDatabaseReference

GAS1
type: EnsemblDatabaseReference

(Assay) Substantia nigra PD rep11
type: Assay
identifier: Substantia nigra PD rep11
has participant: A-AFFY-44

KCNJ6 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.79115910308929
p value: 0.0346512033422463
refers to: KCNJ6
refers to: 210454_s_at
t statistic: -4.00752635047407

DNAJB6 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.24130816743292
p value: 0.00996908153220354
refers to: 209015_s_at
refers to: DNAJB6
t statistic: 5.31618876509408

KCNJ6 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.17379052519837
p value: 0.0389034967894285
refers to: KCNJ6
refers to: 232411_at
t statistic: -3.87277654296227

UNC13C
type: EnsemblDatabaseReference

SLC18A2 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.32644329963201
p value: 0.00996908153220354
refers to: 1553328_a_at
refers to: SLC18A2
t statistic: -5.31463838604815

RBM3
type: EnsemblDatabaseReference

212224_at
type: EFO_0005072
part of: A-AFFY-44

CLSTN2
type: EnsemblDatabaseReference

ANKRD29
type: EnsemblDatabaseReference

239913_at
type: EFO_0005072
part of: A-AFFY-44

RET
type: EnsemblDatabaseReference

1556095_at
type: EFO_0005072
part of: A-AFFY-44

215771_x_at
type: EFO_0005072
part of: A-AFFY-44

DNAJB6
type: EnsemblDatabaseReference

232411_at
type: EFO_0005072
part of: A-AFFY-44

227321_at
type: EFO_0005072
part of: A-AFFY-44

RERG DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.30242267264971
p value: 0.0400754045306377
refers to: RERG
refers to: 227758_at
t statistic: -3.84727348026948

HSPA1B
type: EnsemblDatabaseReference

TPBG DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.44040753263947
p value: 0.0343526105593874
refers to: TPBG
refers to: 203476_at
t statistic: -4.03188682534648

(Assay) Substantia nigra PD rep5
type: Assay
identifier: Substantia nigra PD rep5
has participant: A-AFFY-44

SLC18A2
type: EnsemblDatabaseReference

SNRNP48
type: EnsemblDatabaseReference

NTN1
type: EnsemblDatabaseReference

SCUBE1
type: EnsemblDatabaseReference

(Assay) Substantia nigra PD rep4
type: Assay
identifier: Substantia nigra PD rep4
has participant: A-AFFY-44

EBF3 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.47060187097984
p value: 0.0172765461209472
refers to: EBF3
refers to: 227243_s_at
t statistic: -4.61347056423695

JMJD6
type: EnsemblDatabaseReference

CLSTN2 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.64260185691027
p value: 0.0431977787493752
refers to: CLSTN2
refers to: 229580_at
t statistic: -3.75195482894172

226317_at
type: EFO_0005072
part of: A-AFFY-44

211421_s_at
type: EFO_0005072
part of: A-AFFY-44

CIRBP DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.20278053862321
p value: 0.0218583240459867
refers to: CIRBP
refers to: 200811_at
t statistic: -4.3812727804357

207859_s_at
type: EFO_0005072
part of: A-AFFY-44

(Assay) Substantia nigra PD rep9
type: Assay
identifier: Substantia nigra PD rep9
has participant: A-AFFY-44

230741_at
type: EFO_0005072
part of: A-AFFY-44

SLC10A4
type: EnsemblDatabaseReference

213995_at
type: EFO_0005072
part of: A-AFFY-44

(Sample) disease/none
type: EFO_0001461
property type: disease
property value: none

ALDH1A1
type: EnsemblDatabaseReference

RERG
type: EnsemblDatabaseReference

P2RX7
type: EnsemblDatabaseReference

C21orf37
type: EnsemblDatabaseReference

P2RX7 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.07723306155095
p value: 0.0099501914146596
refers to: 230741_at
refers to: P2RX7
t statistic: 5.466119696635

KCNJ6
type: EnsemblDatabaseReference

SLC6A3
type: EnsemblDatabaseReference

P4HA1
type: EnsemblDatabaseReference

EN1
type: EnsemblDatabaseReference

PPP4R2
type: EnsemblDatabaseReference

CHRNB3
type: EnsemblDatabaseReference

223588_at
type: EFO_0005072
part of: A-AFFY-44

(Assay) Substantia nigra normal rep8
type: Assay
identifier: Substantia nigra normal rep8
has participant: A-AFFY-44

209560_s_at
type: EFO_0005072
part of: A-AFFY-44

CEP41
type: EnsemblDatabaseReference

CNIH3
type: EnsemblDatabaseReference

206836_at
type: EFO_0005072
part of: A-AFFY-44

(Assay) Substantia nigra PD rep8
type: Assay
identifier: Substantia nigra PD rep8
has participant: A-AFFY-44

RSPO2
type: EnsemblDatabaseReference

SLC18A2 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.95054095679832
p value: 0.0120234126214563
refers to: SLC18A2
refers to: 205857_at
t statistic: -5.05635065905243

200811_at
type: EFO_0005072
part of: A-AFFY-44

(Factor value) DISEASE/none
type: EFO_0001461
property type: DISEASE
property value: none

OSBPL10
type: EnsemblDatabaseReference

SLCO4A1
type: EnsemblDatabaseReference

225485_at
type: EFO_0005072
part of: A-AFFY-44

RELN UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.35886040436042
p value: 0.0389034967894285
refers to: RELN
refers to: 205923_at
t statistic: 3.87538888743644

A-AFFY-44
type: EFO_0000269

227243_s_at
type: EFO_0005072
part of: A-AFFY-44

(Assay) Substantia nigra PD rep3
type: Assay
identifier: Substantia nigra PD rep3
has participant: A-AFFY-44

RBM3
type: EnsemblDatabaseReference

205357_s_at
type: EFO_0005072
part of: A-AFFY-44

DNAJB6
type: EnsemblDatabaseReference

240801_at
type: EFO_0005072
part of: A-AFFY-44

TPBG
type: EnsemblDatabaseReference

SV2C DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.04092293155931
p value: 0.0472701098207804
refers to: 216086_at
refers to: SV2C
t statistic: -3.64985657097401

HSPA1B UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.36228980827512
p value: 0.046894395014707
refers to: HSPA1B
refers to: 202581_at
t statistic: 3.65680313928997

NTN1
type: EnsemblDatabaseReference

DLK1
type: EnsemblDatabaseReference

SNRNP48
type: EnsemblDatabaseReference

UNC13C DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.36392750776969
p value: 0.0345137235924888
refers to: UNC13C
refers to: 1556096_s_at
t statistic: -4.02457377213178

SCUBE1
type: EnsemblDatabaseReference

CNIH3 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02372821537071
p value: 0.0370529147383555
refers to: CNIH3
refers to: 214841_at
t statistic: -3.95959381903013

SLC6A3 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.47229533891069
p value: 0.0163319995977014
refers to: SLC6A3
refers to: 206836_at
t statistic: -4.64497533341922

KLHL1
type: EnsemblDatabaseReference

CHRNB3 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.05657781342195
p value: 0.0379563882667206
refers to: CHRNB3
refers to: 207859_s_at
t statistic: -3.90498953320492

Homo sapiens
type: OBI_0100026

GBE1 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.33835482208621
p value: 0.0376096592715626
refers to: GBE1
refers to: 203282_at
t statistic: -3.9327902942167

EN1 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.63573348362726
p value: 0.0324975533788534
refers to: EN1
refers to: 220559_at
t statistic: -4.0775797200461

1554012_at
type: EFO_0005072
part of: A-AFFY-44

(Factor value) DISEASE/Parkinson's disease
type: EFO_0002508
property type: DISEASE
property value: Parkinson's disease

KCNJ6
type: EnsemblDatabaseReference

223810_at
type: EFO_0005072
part of: A-AFFY-44

205923_at
type: EFO_0005072
part of: A-AFFY-44

ATP5S
type: EnsemblDatabaseReference

205311_at
type: EFO_0005072
part of: A-AFFY-44

229580_at
type: EFO_0005072
part of: A-AFFY-44

CHRNB3
type: EnsemblDatabaseReference

RET
type: EnsemblDatabaseReference

CNIH3
type: EnsemblDatabaseReference

UNC13C DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.16690124747476
p value: 0.0285670495174346
refers to: 1569969_a_at
refers to: UNC13C
t statistic: -4.16670232052005

RERG DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14045217448807
p value: 0.0462328352362096
refers to: 244745_at
refers to: RERG
t statistic: -3.67889141408283

RSPO2 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.98041280425638
p value: 0.0274915985929395
refers to: RSPO2
refers to: 1554012_at
t statistic: -4.19973308110235

(Assay) Substantia nigra PD rep16
type: Assay
identifier: Substantia nigra PD rep16
has participant: A-AFFY-44

207543_s_at
type: EFO_0005072
part of: A-AFFY-44

OSBPL10
type: EnsemblDatabaseReference

KCNE4 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.08060177062008
p value: 0.0476046248215035
refers to: 222379_at
refers to: KCNE4
t statistic: 3.64633846512495

222379_at
type: EFO_0005072
part of: A-AFFY-44

RET DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.85210775981462
p value: 0.0454398556406103
refers to: RET
refers to: 211421_s_at
t statistic: -3.69778777775413

(Assay) Substantia nigra normal rep3
type: Assay
identifier: Substantia nigra normal rep3
has participant: A-AFFY-44

PCSK1 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.71864192989266
p value: 0.0462328352362096
refers to: PCSK1
refers to: 205825_at
t statistic: -3.67648064059512

SLIT1
type: EnsemblDatabaseReference

KCNE4
type: EnsemblDatabaseReference

210454_s_at
type: EFO_0005072
part of: A-AFFY-44

(Assay) Substantia nigra PD rep15
type: Assay
identifier: Substantia nigra PD rep15
has participant: A-AFFY-44

SLC10A4 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.63718623715591
p value: 0.0287870747098256
refers to: SLC10A4
refers to: 239913_at
t statistic: -4.16148388823321

PCDH8
type: EnsemblDatabaseReference

209911_x_at
type: EFO_0005072
part of: A-AFFY-44

RERG
type: EnsemblDatabaseReference

ALDH1A1
type: EnsemblDatabaseReference

EBF3
type: EnsemblDatabaseReference

HIST1H2BD UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.12520743164525
p value: 0.0274915985929395
refers to: 209911_x_at
refers to: HIST1H2BD
t statistic: 4.1975373393395

P2RX7
type: EnsemblDatabaseReference

(Assay) Substantia nigra PD rep7
type: Assay
identifier: Substantia nigra PD rep7
has participant: A-AFFY-44

225239_at
type: EFO_0005072
part of: A-AFFY-44

1552507_at
type: EFO_0005072
part of: A-AFFY-44

TPBG
type: EnsemblDatabaseReference

GBE1
type: EnsemblDatabaseReference

P4HA1
type: EnsemblDatabaseReference

209015_s_at
type: EFO_0005072
part of: A-AFFY-44

(Sample) sex/female
type: EFO_0001265
property type: sex
property value: female

EN1
type: EnsemblDatabaseReference

CIRBP
type: EnsemblDatabaseReference

DLK1
type: EnsemblDatabaseReference

CEP41
type: EnsemblDatabaseReference

C21orf37 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.40563179381344
p value: 0.0120234126214563
refers to: C21orf37
refers to: 240801_at
t statistic: -4.96238527073245

P4HA1 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.07337147453834
p value: 0.0218583240459867
refers to: P4HA1
refers to: 207543_s_at
t statistic: 4.36454782479636

208319_s_at
type: EFO_0005072
part of: A-AFFY-44

219895_at
type: EFO_0005072
part of: A-AFFY-44

CDH8
type: EnsemblDatabaseReference

CIRBP DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.20193534926026
p value: 0.0218583240459867
refers to: CIRBP
refers to: 200810_s_at
t statistic: -4.37333383262889

(Assay) Substantia nigra normal rep4
type: Assay
identifier: Substantia nigra normal rep4
has participant: A-AFFY-44

(Sample) organism/Homo sapiens
type: Homo sapiens
property type: organism
property value: Homo sapiens

219911_s_at
type: EFO_0005072
part of: A-AFFY-44

242530_at
type: EFO_0005072
part of: A-AFFY-44

213601_at
type: EFO_0005072
part of: A-AFFY-44

HIST1H2BD
type: EnsemblDatabaseReference

NUP93 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21869816234239
p value: 0.0218583240459867
refers to: NUP93
refers to: 241758_at
t statistic: -4.37480128463447

206935_at
type: EFO_0005072
part of: A-AFFY-44

217574_at
type: EFO_0005072
part of: A-AFFY-44

PCSK1
type: EnsemblDatabaseReference

CDH8 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.48774835478184
p value: 0.0120234126214563
refers to: CDH8
refers to: 217574_at
t statistic: -4.97833090909971

SV2C
type: EnsemblDatabaseReference

208291_s_at
type: EFO_0005072
part of: A-AFFY-44

NEAT1
type: EnsemblDatabaseReference

BCL6
type: EnsemblDatabaseReference

ATP5S
type: EnsemblDatabaseReference

1553274_a_at
type: EFO_0005072
part of: A-AFFY-44

(Sample) sex/male
type: EFO_0001266
property type: sex
property value: male

(Assay) Substantia nigra PD rep6
type: Assay
identifier: Substantia nigra PD rep6
has participant: A-AFFY-44

RET DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04409768270496
p value: 0.040602241190051
refers to: RET
refers to: 215771_x_at
t statistic: -3.82272274922837

UNC13C DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.4988837274053
p value: 0.0152805118351176
refers to: UNC13C
refers to: 1556095_at
t statistic: -4.72199385833507

(Sample) organism part/substantia nigra
type: UBERON_0002038
property type: organism part
property value: substantia nigra

NEAT1 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45456641746707
p value: 0.0480841542048618
refers to: NEAT1
refers to: 227062_at
t statistic: 3.63425535108102

220559_at
type: EFO_0005072
part of: A-AFFY-44

203476_at
type: EFO_0005072
part of: A-AFFY-44

(Assay) Substantia nigra normal rep9
type: Assay
identifier: Substantia nigra normal rep9
has participant: A-AFFY-44

TH
type: EnsemblDatabaseReference

SCUBE1 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02496248350475
p value: 0.0424831049256049
refers to: SCUBE1
refers to: 1552388_at
t statistic: -3.76846282585181

ALDH1A1 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.94060735873214
p value: 0.0199161465514554
refers to: ALDH1A1
refers to: 212224_at
t statistic: -4.50031862368277

203282_at
type: EFO_0005072
part of: A-AFFY-44

205825_at
type: EFO_0005072
part of: A-AFFY-44

GATS
type: EnsemblDatabaseReference

TMEM255A DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.76857736342463
p value: 0.0341156930907277
refers to: TMEM255A
refers to: 219895_at
t statistic: -4.04369456260149

NTN1 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08238832308152
p value: 0.0243262556458301
refers to: NTN1
refers to: 227816_at
t statistic: -4.28672533679207

SLIT1
type: EnsemblDatabaseReference

CEP41 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11388670240633
p value: 0.0244728922304822
refers to: CEP41
refers to: 225485_at
t statistic: -4.27948915640398

227758_at
type: EFO_0005072
part of: A-AFFY-44

KCNE4
type: EnsemblDatabaseReference

DLK1 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.97205951741441
p value: 0.0117741401443621
refers to: DLK1
refers to: 209560_s_at
t statistic: -5.11273113421171

(Assay) Substantia nigra PD rep2
type: Assay
identifier: Substantia nigra PD rep2
has participant: A-AFFY-44

GAS1
type: EnsemblDatabaseReference

204457_s_at
type: EFO_0005072
part of: A-AFFY-44

DDC
type: EnsemblDatabaseReference

RELN
type: EnsemblDatabaseReference

SLCO4A1 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.47837923022987
p value: 0.0324975533788534
refers to: 219911_s_at
refers to: SLCO4A1
t statistic: 4.08426412711856

227816_at
type: EFO_0005072
part of: A-AFFY-44

NUP93
type: EnsemblDatabaseReference

SNRNP48 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.00656755668324
p value: 0.0370529147383555
refers to: SNRNP48
refers to: 1553274_a_at
t statistic: 3.94123153842163

SLIT1 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14579453263742
p value: 0.043479580688133
refers to: SLIT1
refers to: 213601_at
t statistic: -3.74057227736153

UNC13C
type: EnsemblDatabaseReference

BCL6 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.16253440639415
p value: 0.0274915985929395
refers to: BCL6
refers to: 203140_at
t statistic: 4.1972879835894

GBE1
type: EnsemblDatabaseReference

KLHL1 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.49664080674388
p value: 0.0379563882667206
refers to: KLHL1
refers to: 223810_at
t statistic: -3.90826153210313

(Assay) Substantia nigra PD rep12
type: Assay
identifier: Substantia nigra PD rep12
has participant: A-AFFY-44

203140_at
type: EFO_0005072
part of: A-AFFY-44

CIRBP
type: EnsemblDatabaseReference

1553328_a_at
type: EFO_0005072
part of: A-AFFY-44

E-GEOD-7621
type: microarray 1colour mrna differential
RO_0002162: Homo sapiens
description: We used microarrays to detail the global program of gene expression underlying Parkinson's disease Experiment Overall Design: Substantia nigra tissue from postmortem brain of normal and Parkinson disease patients were used for RNA extraction and hybridization on Affymetrix microarrays: 9 replicates for the controls and 16 replicates for the Parkinson's disease patients were used. Both cohorts included males and females.
uses data from: http://identifiers.org/pubmed/17571925

(Assay) Substantia nigra normal rep6
type: Assay
identifier: Substantia nigra normal rep6
has participant: A-AFFY-44

THAP2 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03382951403006
p value: 0.0105313553998548
refers to: 223588_at
refers to: THAP2
t statistic: 5.21137414517082

(Sample) disease/Parkinson's disease
type: EFO_0002508
property type: disease
property value: Parkinson's disease

SLC18A2
type: EnsemblDatabaseReference

227242_s_at
type: EFO_0005072
part of: A-AFFY-44

215233_at
type: EFO_0005072
part of: A-AFFY-44

AGTR1
type: EnsemblDatabaseReference

JMJD6
type: EnsemblDatabaseReference

OSBPL10 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.25202464303565
p value: 0.0408252803278886
refers to: OSBPL10
refers to: 219073_s_at
t statistic: -3.81044282420034

TMEM255A
type: EnsemblDatabaseReference

KCNE4 UP in 'Parkinson's disease' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13814272773183
p value: 0.043918556446541
refers to: KCNE4
refers to: 1552507_at
t statistic: 3.72705751168641

216086_at
type: EFO_0005072
part of: A-AFFY-44

219073_s_at
type: EFO_0005072
part of: A-AFFY-44

HIST1H2BD
type: EnsemblDatabaseReference

1569969_a_at
type: EFO_0005072
part of: A-AFFY-44

THAP2
type: EnsemblDatabaseReference

PCDH8 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.84249913057281
p value: 0.0331669966068619
refers to: PCDH8
refers to: 206935_at
t statistic: -4.06359138745733

PCSK1
type: EnsemblDatabaseReference

(Assay) Substantia nigra normal rep2
type: Assay
identifier: Substantia nigra normal rep2
has participant: A-AFFY-44

200810_s_at
type: EFO_0005072
part of: A-AFFY-44

PCDH8
type: EnsemblDatabaseReference

202581_at
type: EFO_0005072
part of: A-AFFY-44

BCL6
type: EnsemblDatabaseReference

EBF3
type: EnsemblDatabaseReference

(Assay) Substantia nigra PD rep1
type: Assay
identifier: Substantia nigra PD rep1
has participant: A-AFFY-44

ATP5S DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03393169192845
p value: 0.0427056043330592
refers to: ATP5S
refers to: 213995_at
t statistic: -3.76002704754465

RBM3 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -2.75556299811918
p value: 0.0099501914146596
refers to: RBM3
refers to: 208319_s_at
t statistic: -5.52725923022691

EBF3 DOWN in 'Parkinson's disease' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.43360223597135
p value: 0.0495388815043989
refers to: EBF3
refers to: 227242_s_at
t statistic: -3.58681458142994

(Assay) Substantia nigra normal rep5
type: Assay
identifier: Substantia nigra normal rep5
has participant: A-AFFY-44

CLSTN2
type: EnsemblDatabaseReference

PPP4R2
type: EnsemblDatabaseReference

ANKRD29
type: EnsemblDatabaseReference

241758_at
type: EFO_0005072
part of: A-AFFY-44