Ttr DOWN in 'rab3a D77G mutant' vs 'wild type genotype' in 'litter 1; hippocampus' on 'Affymetrix 430A 2.0'
Prdx2 DOWN in 'rab3a knockout' vs 'wild type genotype' in 'litter 2; hippocampus' on 'Affymetrix 430A 2.0'
Rab3a DOWN in 'rab3a knockout' vs 'wild type genotype' in 'litter 2; cortex' on 'Affymetrix 430A 2.0'
(Assay) earlybird wildtype hippocampus hew1A
Analysis of 'rab3a knockout' vs 'wild type genotype' in 'litter 2; cortex' on 'Affymetrix 430A 2.0'
(Assay) earlybird wildtype hippocampus hew1 B
The cortex and hippocampus were dissected from each individual mouse. Targets from three biological replicates of earlybird mutants and their wildtype littermates and six replicates of Rab3a knockouts and wildtype littermates were generated and the expression profiles were determined using Affymetrix MOE430 A and B arrays. Comparisons between the sample groups allow the identification of tissue specifically expressed genes and genes that are affected by mutations of Rab3a. Experiment Overall Design: Cortex and hippocampus from 3 biological replicates of earlybird mutants and wildtype littermates and 6 biological replicates of Rab3a knockouts and wildtype littermates were analyzed
(Assay) earlybird mutant hippocampus hem2 B
Mtmr7 DOWN in 'rab3a D77G mutant' vs 'wild type genotype' in 'litter 1; hippocampus' on 'Affymetrix MOE430B'
Analysis of 'rab3a D77G mutant' vs 'wild type genotype' in 'litter 1; hippocampus' on 'Affymetrix 430A 2.0'
(Factor value) GENOTYPE/rab3a D77G mutant
(Assay) earlybird mutant hippocampus hem3A
(Assay) earlybird wildtype hippocampus hew3 B
(Assay) earlybird wildtype hippocampus hew3A
(Assay) earlybird wildtype cortex cew3 B
Analysis of 'rab3a D77G mutant' vs 'wild type genotype' in 'litter 1; hippocampus' on 'Affymetrix MOE430B'
(Factor value) GENOTYPE/wild type genotype
Rab3a DOWN in 'rab3a knockout' vs 'wild type genotype' in 'litter 2; hippocampus' on 'Affymetrix 430A 2.0'
(Assay) earlybird mutant hippocampus hem2A
Analysis of 'rab3a knockout' vs 'wild type genotype' in 'litter 2; hippocampus' on 'Affymetrix 430A 2.0'
(Factor value) ORGANISM_PART/hippocampus
(Assay) earlybird wildtype cortex cew2 B
(Assay) earlybird wildtype cortex cew1 B
Zic1 DOWN in 'rab3a D77G mutant' vs 'wild type genotype' in 'litter 1; hippocampus' on 'Affymetrix MOE430B'
(Assay) earlybird mutant hippocampus hem1 B
(Assay) earlybird wildtype hippocampus hew2 B
(Assay) earlybird mutant hippocampus hem3 B
Prdx2 DOWN in 'rab3a knockout' vs 'wild type genotype' in 'litter 2; cortex' on 'Affymetrix 430A 2.0'
Lpl UP in 'rab3a knockout' vs 'wild type genotype' in 'litter 2; hippocampus' on 'Affymetrix 430A 2.0'
(Assay) earlybird wildtype hippocampus hew2A
(Assay) earlybird mutant hippocampus hem1A