MRPL24
type: EnsemblDatabaseReference

PCA1
type: EnsemblDatabaseReference

THI7 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.33409554952349
p value: 0.0489931281620075
refers to: THI7
refers to: 10085_at
t statistic: 3.59214550611291

TEL2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21901458018636
p value: 0.0421434106327713
refers to: TEL2
refers to: 2141_s_at
t statistic: -3.8075236087251

RAX1
type: EnsemblDatabaseReference

ADE2
type: EnsemblDatabaseReference

6916_at
type: EFO_0005072
part of: A-AFFY-27

UTP20 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.63213337341653
p value: 0.0323943677508954
refers to: UTP20
refers to: 2468_s_at
t statistic: -4.22769846977258

YRA1
type: EnsemblDatabaseReference

GSC2
type: EnsemblDatabaseReference

FAS2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.07594348644919
p value: 0.0239104246277105
refers to: 2607_s_at
refers to: FAS2
t statistic: -4.79987503575882

ABF1
type: EnsemblDatabaseReference

ARG1
type: EnsemblDatabaseReference

4489_at
type: EFO_0005072
part of: A-AFFY-27

HIS3 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.44870924148866
p value: 0.0114708708870626
refers to: HIS3
refers to: 8359_at
t statistic: 7.55152011911608

YAR029W
type: EnsemblDatabaseReference

INO2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.48046663498672
p value: 0.0145911962431964
refers to: 6358_at
refers to: INO2
t statistic: -6.34368106324086

MHR1 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13364319992954
p value: 0.0352176653124055
refers to: MHR1
refers to: 6170_at
t statistic: 4.08531267441389

PIC2
type: EnsemblDatabaseReference

VAC17
type: EnsemblDatabaseReference

5196_at
type: EFO_0005072
part of: A-AFFY-27

TIP1
type: EnsemblDatabaseReference

RPL18B
type: EnsemblDatabaseReference

MET17
type: EnsemblDatabaseReference

5990_at
type: EFO_0005072
part of: A-AFFY-27

7475_at
type: EFO_0005072
part of: A-AFFY-27

MET14
type: EnsemblDatabaseReference

LEU2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.14412778490652
p value: 0.0247751850259707
refers to: LEU2
refers to: 2437_s_at
t statistic: -4.67282579210863

7389_at
type: EFO_0005072
part of: A-AFFY-27

YGL039W DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.32106754347704
p value: 0.0455033942621808
refers to: YGL039W
refers to: 5068_at
t statistic: -3.70587026583393

TEC1
type: EnsemblDatabaseReference

CIS3 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.48701599993607
p value: 0.0145911962431964
refers to: 11180_at
refers to: CIS3
t statistic: -6.33206635255976

4936_at
type: EFO_0005072
part of: A-AFFY-27

LEU1 DOWN in 'Abf1 mutant' vs 'Abf1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.32225443235087
p value: 0.0384582948683036
refers to: LEU1
refers to: 5008_at
t statistic: -6.67524265393881

HHO1
type: EnsemblDatabaseReference

CHL1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21559397139807
p value: 0.0352176653124055
refers to: 2572_s_at
refers to: CHL1
t statistic: -4.09524051655918

YGR093W
type: EnsemblDatabaseReference

ERC1
type: EnsemblDatabaseReference

(Assay) Abf1 wt 37C rep3
type: Assay
identifier: Abf1 wt 37C rep3
has participant: A-AFFY-27

GCD11
type: EnsemblDatabaseReference

CYC7
type: EnsemblDatabaseReference

7438_at
type: EFO_0005072
part of: A-AFFY-27

YOR203W
type: EnsemblDatabaseReference

9604_at
type: EFO_0005072
part of: A-AFFY-27

5192_at
type: EFO_0005072
part of: A-AFFY-27

FAS1
type: EnsemblDatabaseReference

ARO8 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04593892937613
p value: 0.0369614771052655
refers to: ARO8
refers to: 5223_at
t statistic: -4.01793063652807

(Sample) organism/Saccharomyces cerevisiae
type: Saccharomyces cerevisiae
property type: organism
property value: Saccharomyces cerevisiae

AFFX-YEL021w/URA3_at
type: EFO_0005072
part of: A-AFFY-27

ICS2 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15261004522865
p value: 0.0167737222081193
refers to: ICS2
refers to: 7025_at
t statistic: 5.60593872259514

HOM2
type: EnsemblDatabaseReference

COS10
type: EnsemblDatabaseReference

8118_i_at
type: EFO_0005072
part of: A-AFFY-27

MRPL27 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.12646392870095
p value: 0.0288048932649529
refers to: 7100_at
refers to: MRPL27
t statistic: 4.49062028221971

RCK2
type: EnsemblDatabaseReference

BUD4 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.41252944661978
p value: 0.0181191650603974
refers to: BUD4
refers to: 3012_s_at
t statistic: -5.48227386131708

YPL113C
type: EnsemblDatabaseReference

YGL188C
type: EnsemblDatabaseReference

ORC6
type: EnsemblDatabaseReference

MET6
type: EnsemblDatabaseReference

MSA2 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10127742846871
p value: 0.0216184658588177
refers to: 10502_at
refers to: MSA2
t statistic: 4.97260809809527

PET191
type: EnsemblDatabaseReference

ICS2
type: EnsemblDatabaseReference

BTN2
type: EnsemblDatabaseReference

ACT1
type: EnsemblDatabaseReference

RPS25B DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.55414375668213
p value: 0.0167666439947131
refers to: RPS25B
refers to: 10003_f_at
t statistic: -5.62406953532901

(Factor value) GENOTYPE/Abf1 wild type control
type: EFO_0000001
property type: GENOTYPE
property value: Abf1 wild type control

4835_at
type: EFO_0005072
part of: A-AFFY-27

MSA2
type: EnsemblDatabaseReference

RPS0B
type: EnsemblDatabaseReference

4386_at
type: EFO_0005072
part of: A-AFFY-27

ZRT1
type: EnsemblDatabaseReference

10125_at
type: EFO_0005072
part of: A-AFFY-27

2947_s_at
type: EFO_0005072
part of: A-AFFY-27

4220_at
type: EFO_0005072
part of: A-AFFY-27

6811_at
type: EFO_0005072
part of: A-AFFY-27

ARO8
type: EnsemblDatabaseReference

RPL17B
type: EnsemblDatabaseReference

OST3
type: EnsemblDatabaseReference

YDR089W DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23086759982213
p value: 0.0405438078685185
refers to: YDR089W
refers to: 2376_s_at
t statistic: -3.88436617676761

DBP2
type: EnsemblDatabaseReference

YNL146C-A UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4875525851551
p value: 0.016629790336552
refers to: YNL146C-A
refers to: 8759_at
t statistic: 5.7112882352212

SCP1
type: EnsemblDatabaseReference

URA3 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.29499989936974
p value: 0.0216184658588177
refers to: URA3
refers to: AFFX-YEL021w/URA3_at
t statistic: -4.97275861623565

TOS6
type: EnsemblDatabaseReference

ARE1
type: EnsemblDatabaseReference

IRC18 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.26177848589186
p value: 0.02303932070368
refers to: 11075_at
refers to: IRC18
t statistic: 4.89175219867208

4530_at
type: EFO_0005072
part of: A-AFFY-27

HIS4
type: EnsemblDatabaseReference

5558_at
type: EFO_0005072
part of: A-AFFY-27

KSH1
type: EnsemblDatabaseReference

FAS2
type: EnsemblDatabaseReference

SRS2
type: EnsemblDatabaseReference

MRPL24 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09613276947453
p value: 0.0475909827993953
refers to: MRPL24
refers to: 9418_at
t statistic: 3.65687705735234

SNF3 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.42271861691993
p value: 0.0482113102820834
refers to: 6669_at
refers to: SNF3
t statistic: 3.63175407049661

PUB1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.70386848100409
p value: 0.0486887880824326
refers to: PUB1
refers to: 8879_at
t statistic: -3.61470606037661

YEL023C
type: EnsemblDatabaseReference

YLR040C
type: EnsemblDatabaseReference

SNF3
type: EnsemblDatabaseReference

4515_i_at
type: EFO_0005072
part of: A-AFFY-27

HHO1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.92827479137366
p value: 0.0245540825271007
refers to: 7898_at
refers to: HHO1
t statistic: -4.68751348747598

HUG1
type: EnsemblDatabaseReference

IDP2 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06317492122651
p value: 0.0243258742201686
refers to: IDP2
refers to: 10154_at
t statistic: 4.73428133881974

YKL177W
type: EnsemblDatabaseReference

5702_at
type: EFO_0005072
part of: A-AFFY-27

3058_s_at
type: EFO_0005072
part of: A-AFFY-27

PUB1
type: EnsemblDatabaseReference

RPS22B DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.58541775969392
p value: 0.00640111627810692
refers to: RPS22B
refers to: 9946_at
t statistic: -11.2894169626434

4032_f_at
type: EFO_0005072
part of: A-AFFY-27

10172_at
type: EFO_0005072
part of: A-AFFY-27

PAB1
type: EnsemblDatabaseReference

2191_s_at
type: EFO_0005072
part of: A-AFFY-27

ATG8
type: EnsemblDatabaseReference

ABF1 UP in 'Abf1 mutant' vs 'Abf1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 2.87139325964068
p value: 0.0452373139947727
refers to: 10672_at
refers to: ABF1
t statistic: 5.90871295200385

RPL7B
type: EnsemblDatabaseReference

10223_at
type: EFO_0005072
part of: A-AFFY-27

MMR1
type: EnsemblDatabaseReference

YJL218W UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.25922767426983
p value: 0.0210237894930741
refers to: YJL218W
refers to: 11254_at
t statistic: 5.04700508755762

BUD4
type: EnsemblDatabaseReference

(Assay) Rap1 ts 37 C rep2
type: Assay
identifier: Rap1 ts 37 C rep2
has participant: A-AFFY-27

MDL2
type: EnsemblDatabaseReference

YDR034W-B UP in 'Abf1 mutant' vs 'Abf1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 2.27783613994977
p value: 0.0180499264326151
refers to: YDR034W-B
refers to: 6449_at
t statistic: 9.58720935599349

CIS3
type: EnsemblDatabaseReference

YDR089W
type: EnsemblDatabaseReference

MET17 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.7015764623689
p value: 0.0314383818794113
refers to: MET17
refers to: 10018_at
t statistic: -4.33439323523079

9975_at
type: EFO_0005072
part of: A-AFFY-27

TOS1
type: EnsemblDatabaseReference

GSC2
type: EnsemblDatabaseReference

YIR043C UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.35533606342351
p value: 0.0305404888826046
refers to: 4032_f_at
refers to: YIR043C
t statistic: 4.36845636564692

ABF1
type: EnsemblDatabaseReference

ENV9 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.29322675878967
p value: 0.0244930938901174
refers to: ENV9
refers to: 8312_at
t statistic: -4.71137821802334

MET5
type: EnsemblDatabaseReference

COS10 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04540254203464
p value: 0.0314383818794113
refers to: COS10
refers to: 3626_i_at
t statistic: -4.33442529463388

5751_at
type: EFO_0005072
part of: A-AFFY-27

RPS22B
type: EnsemblDatabaseReference

YAR029W
type: EnsemblDatabaseReference

(Assay) Abf1 ts 37 C rep3
type: Assay
identifier: Abf1 ts 37 C rep3
has participant: A-AFFY-27

VAC17
type: EnsemblDatabaseReference

GSC2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.85541540098917
p value: 0.00898284676757532
refers to: GSC2
refers to: 4959_at
t statistic: -9.0026750129219

YJR008W UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.00869436447207
p value: 0.0233634116933131
refers to: YJR008W
refers to: 11030_at
t statistic: 4.87103708199212

AFFX-YFL039CM_at
type: EFO_0005072
part of: A-AFFY-27

NPL3 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21074857919027
p value: 0.0271394471776085
refers to: NPL3
refers to: 6038_at
t statistic: -4.55211308349292

YER137C UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45605761652756
p value: 0.0485464420633692
refers to: YER137C
refers to: 5578_at
t statistic: 3.62365080240296

MET14
type: EnsemblDatabaseReference

11291_at
type: EFO_0005072
part of: A-AFFY-27

INO2
type: EnsemblDatabaseReference

5068_at
type: EFO_0005072
part of: A-AFFY-27

6078_at
type: EFO_0005072
part of: A-AFFY-27

(Sample) genotype/Rap1 wild type control
type: EFO_0000001
property type: genotype
property value: Rap1 wild type control

5767_at
type: EFO_0005072
part of: A-AFFY-27

6837_at
type: EFO_0005072
part of: A-AFFY-27

ARG3 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.10894980680944
p value: 0.032207037612231
refers to: 11114_at
refers to: ARG3
t statistic: -4.27975256618898

YDR461C-A
type: EnsemblDatabaseReference

CYC7
type: EnsemblDatabaseReference

A-AFFY-27
type: EFO_0000269

NDL1
type: EnsemblDatabaseReference

VAC17 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.58227863762837
p value: 0.0187555833517792
refers to: VAC17
refers to: 6916_at
t statistic: -5.22282068301084

8251_at
type: EFO_0005072
part of: A-AFFY-27

11254_at
type: EFO_0005072
part of: A-AFFY-27

IMD1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.72013454004862
p value: 0.0146263046884895
refers to: IMD1
refers to: 11263_f_at
t statistic: -6.12865554772392

MET28
type: EnsemblDatabaseReference

FAS1
type: EnsemblDatabaseReference

LEU2
type: EnsemblDatabaseReference

10003_f_at
type: EFO_0005072
part of: A-AFFY-27

CDC26
type: EnsemblDatabaseReference

ERC1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.43835349508793
p value: 0.0145911962431964
refers to: ERC1
refers to: 4506_at
t statistic: -6.37696364401831

YDR461C-A UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.42443425653618
p value: 0.0216184658588177
refers to: YDR461C-A
refers to: 5820_at
t statistic: 5.0074933959988

YBR197C DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.43215292633031
p value: 0.0345125745011256
refers to: 7153_at
refers to: YBR197C
t statistic: -4.13189432080963

8466_at
type: EFO_0005072
part of: A-AFFY-27

ISC1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.40065755628579
p value: 0.043480949510592
refers to: ISC1
refers to: 5719_at
t statistic: -3.75553509839505

RPL13A
type: EnsemblDatabaseReference

MET6
type: EnsemblDatabaseReference

YGR093W DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.307769312626
p value: 0.0187555833517792
refers to: YGR093W
refers to: 4929_at
t statistic: -5.28284499527504

COS6 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.05168655106565
p value: 0.0402637197719677
refers to: 3234_at
refers to: COS6
t statistic: -3.90144672613344

URA3
type: EnsemblDatabaseReference

PUT1 UP in 'Abf1 mutant' vs 'Abf1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21681491557972
p value: 0.0384582948683036
refers to: 10172_at
refers to: PUT1
t statistic: 6.1855246720934

4941_at
type: EFO_0005072
part of: A-AFFY-27

UTP20
type: EnsemblDatabaseReference

4959_at
type: EFO_0005072
part of: A-AFFY-27

LEU1
type: EnsemblDatabaseReference

MSA2
type: EnsemblDatabaseReference

ZRT1
type: EnsemblDatabaseReference

7359_at
type: EFO_0005072
part of: A-AFFY-27

SAM3
type: EnsemblDatabaseReference

PGA1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.53022188091644
p value: 0.0398199182927431
refers to: 9010_at
refers to: PGA1
t statistic: -3.93430818700635

SIM1
type: EnsemblDatabaseReference

Analysis of 'Abf1 mutant' vs 'Abf1 wild type control'
type: MicroarrayDifferentialExpressionAnalysis

ARO8
type: EnsemblDatabaseReference

8964_at
type: EFO_0005072
part of: A-AFFY-27

YPL113C UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.51006844331957
p value: 0.0187555833517792
refers to: YPL113C
refers to: 7867_at
t statistic: 5.20922189957502

2593_s_at
type: EFO_0005072
part of: A-AFFY-27

SCP1
type: EnsemblDatabaseReference

TIP1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.7665139462994
p value: 0.0415869407253946
refers to: TIP1
refers to: 7290_at
t statistic: -3.84322780407394

CPR4
type: EnsemblDatabaseReference

ARE1
type: EnsemblDatabaseReference

HTB2
type: EnsemblDatabaseReference

SVS1
type: EnsemblDatabaseReference

YJL218W
type: EnsemblDatabaseReference

RPL7A DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.54995946572491
p value: 0.0130219813405744
refers to: RPL7A
refers to: 5076_f_at
t statistic: -6.98885667237369

HIS4
type: EnsemblDatabaseReference

LEU4 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2750817613164
p value: 0.0440167455167186
refers to: 8973_at
refers to: LEU4
t statistic: -3.73709412572399

5578_at
type: EFO_0005072
part of: A-AFFY-27

YBR197C
type: EnsemblDatabaseReference

2997_s_at
type: EFO_0005072
part of: A-AFFY-27

4506_at
type: EFO_0005072
part of: A-AFFY-27

HXT2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.2272179082189
p value: 0.0235339040681389
refers to: HXT2
refers to: 9633_at
t statistic: -4.83759776407419

KRE6
type: EnsemblDatabaseReference

MMR1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.35517592290753
p value: 0.0486887880824326
refers to: MMR1
refers to: 10125_at
t statistic: -3.61199369290391

YHP1
type: EnsemblDatabaseReference

(Assay) Abf1 ts 37 C rep2
type: Assay
identifier: Abf1 ts 37 C rep2
has participant: A-AFFY-27

YGR021W UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.50062579357874
p value: 0.0498143932383415
refers to: 4994_at
refers to: YGR021W
t statistic: 3.56802028576245

8166_at
type: EFO_0005072
part of: A-AFFY-27

9185_at
type: EFO_0005072
part of: A-AFFY-27

8312_at
type: EFO_0005072
part of: A-AFFY-27

3012_s_at
type: EFO_0005072
part of: A-AFFY-27

KAP120
type: EnsemblDatabaseReference

6170_at
type: EFO_0005072
part of: A-AFFY-27

Saccharomyces cerevisiae
type: OBI_0100026

PAB1
type: EnsemblDatabaseReference

NDL1 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.25072366665652
p value: 0.0489931281620075
refers to: 10056_at
refers to: NDL1
t statistic: 3.59561647439113

YPK9
type: EnsemblDatabaseReference

TOS1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.94645638290761
p value: 0.015993455183113
refers to: TOS1
refers to: 7208_at
t statistic: -5.9111411323713

SPA2
type: EnsemblDatabaseReference

GIC1
type: EnsemblDatabaseReference

CHL1
type: EnsemblDatabaseReference

8976_at
type: EFO_0005072
part of: A-AFFY-27

RAD28
type: EnsemblDatabaseReference

IRC18
type: EnsemblDatabaseReference

GUP1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.36007201133887
p value: 0.032207037612231
refers to: GUP1
refers to: 5113_at
t statistic: -4.25826377411407

NIT3
type: EnsemblDatabaseReference

MRPL27
type: EnsemblDatabaseReference

YGR021W
type: EnsemblDatabaseReference

ZRT1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.73216918393282
p value: 0.0180112385492979
refers to: ZRT1
refers to: 2253_s_at
t statistic: -5.52397477314275

5789_at
type: EFO_0005072
part of: A-AFFY-27

10958_at
type: EFO_0005072
part of: A-AFFY-27

5260_at
type: EFO_0005072
part of: A-AFFY-27

ARG3
type: EnsemblDatabaseReference

PHO4
type: EnsemblDatabaseReference

LCL2
type: EnsemblDatabaseReference

10292_at
type: EFO_0005072
part of: A-AFFY-27

MHR1
type: EnsemblDatabaseReference

KSH1
type: EnsemblDatabaseReference

OPI3
type: EnsemblDatabaseReference

YGL039W
type: EnsemblDatabaseReference

TUB2
type: EnsemblDatabaseReference

YHP1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.80204908913991
p value: 0.0185998694944986
refers to: 6010_at
refers to: YHP1
t statistic: -5.35471823039399

ALD3 UP in 'Abf1 mutant' vs 'Abf1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.84047975920454
p value: 0.0452373139947727
refers to: ALD3
refers to: 9481_at
t statistic: 5.84444795034203

6830_at
type: EFO_0005072
part of: A-AFFY-27

YKR012C
type: EnsemblDatabaseReference

snR70
type: EnsemblDatabaseReference

YBL059W
type: EnsemblDatabaseReference

RPL13A DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.24039882501423
p value: 0.032207037612231
refers to: RPL13A
refers to: 6560_at
t statistic: -4.25529829512818

snR70 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.380303898317
p value: 0.0185998694944986
refers to: snR70
refers to: 7475_at
t statistic: -5.40240157530312

7867_at
type: EFO_0005072
part of: A-AFFY-27

HXT2
type: EnsemblDatabaseReference

7900_at
type: EFO_0005072
part of: A-AFFY-27

5223_at
type: EFO_0005072
part of: A-AFFY-27

DIA4 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.24281792559775
p value: 0.0426278141348439
refers to: DIA4
refers to: 4530_at
t statistic: 3.77319716435407

NIT3 DOWN in 'Abf1 mutant' vs 'Abf1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.20108753986981
p value: 0.0356278709294977
refers to: NIT3
refers to: 9975_at
t statistic: -7.49768674664933

MET28
type: EnsemblDatabaseReference

10056_at
type: EFO_0005072
part of: A-AFFY-27

RNR4
type: EnsemblDatabaseReference

RPR1 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.68101681969556
p value: 0.028998329230602
refers to: 5413_at
refers to: RPR1
t statistic: 4.4652755591837

LEU2
type: EnsemblDatabaseReference

GUP1
type: EnsemblDatabaseReference

RPL7B DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11900056261316
p value: 0.0235339040681389
refers to: RPL7B
refers to: 7961_f_at
t statistic: -4.84599905280278

SPA2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.95976820896923
p value: 0.0352176653124055
refers to: SPA2
refers to: 2947_s_at
t statistic: -4.07826952871518

KES1
type: EnsemblDatabaseReference

NUP49 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.59144150169191
p value: 0.0497575939247899
refers to: NUP49
refers to: 2191_s_at
t statistic: -3.57492530654697

IDP2
type: EnsemblDatabaseReference

GLY1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.45205260126563
p value: 0.0253023386876237
refers to: GLY1
refers to: 5789_at
t statistic: -4.64873153382841

RPS1A
type: EnsemblDatabaseReference

7301_at
type: EFO_0005072
part of: A-AFFY-27

FMC1
type: EnsemblDatabaseReference

THI7
type: EnsemblDatabaseReference

RPS7B DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.38527813137832
p value: 0.00898284676757532
refers to: 8981_at
refers to: RPS7B
t statistic: -8.62959746512544

BTN2 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.26772654447032
p value: 0.0185998694944986
refers to: BTN2
refers to: 4842_at
t statistic: 5.34624283456451

URA3
type: EnsemblDatabaseReference

(Assay) Rap1 wt 37 C rep3
type: Assay
identifier: Rap1 wt 37 C rep3
has participant: A-AFFY-27

YOR203W UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.75137993643972
p value: 0.0239104246277105
refers to: YOR203W
refers to: 8360_at
t statistic: 4.79774459943837

HIS4 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.7158014280414
p value: 0.0138887762396106
refers to: HIS4
refers to: 6902_at
t statistic: -6.63454078935516

FAS1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.15484513764808
p value: 0.0329270624780656
refers to: 2970_s_at
refers to: FAS1
t statistic: -4.20407720597489

OPI10
type: EnsemblDatabaseReference

SCW10 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.27837176509211
p value: 0.0329270624780656
refers to: SCW10
refers to: 9312_at
t statistic: -4.19402480503991

LEU1
type: EnsemblDatabaseReference

ARG5,6 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.45936254265044
p value: 0.0185998694944986
refers to: ARG5,6
refers to: 5642_at
t statistic: -5.39674467130349

8588_at
type: EFO_0005072
part of: A-AFFY-27

7153_at
type: EFO_0005072
part of: A-AFFY-27

ALG3
type: EnsemblDatabaseReference

SIM1
type: EnsemblDatabaseReference

(Assay) Rap1 ts 37 C rep3
type: Assay
identifier: Rap1 ts 37 C rep3
has participant: A-AFFY-27

MOG1
type: EnsemblDatabaseReference

SFG1
type: EnsemblDatabaseReference

7100_at
type: EFO_0005072
part of: A-AFFY-27

ALD3
type: EnsemblDatabaseReference

6444_at
type: EFO_0005072
part of: A-AFFY-27

CPR4
type: EnsemblDatabaseReference

RPS7B
type: EnsemblDatabaseReference

PCA1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.51724888921737
p value: 0.0271394471776085
refers to: 7068_at
refers to: PCA1
t statistic: -4.5505564940998

YDR461C-A
type: EnsemblDatabaseReference

AVT4
type: EnsemblDatabaseReference

6358_at
type: EFO_0005072
part of: A-AFFY-27

2141_s_at
type: EFO_0005072
part of: A-AFFY-27

10154_at
type: EFO_0005072
part of: A-AFFY-27

TEC1 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14403211836414
p value: 0.0187555833517792
refers to: 7261_at
refers to: TEC1
t statistic: 5.27699665108266

ASC1
type: EnsemblDatabaseReference

9397_at
type: EFO_0005072
part of: A-AFFY-27

9293_at
type: EFO_0005072
part of: A-AFFY-27

8420_at
type: EFO_0005072
part of: A-AFFY-27

YMR027W
type: EnsemblDatabaseReference

9344_at
type: EFO_0005072
part of: A-AFFY-27

(Factor value) GENOTYPE/Rap1 mutant
type: EFO_0000001
property type: GENOTYPE
property value: Rap1 mutant

GAS3
type: EnsemblDatabaseReference

(Sample) genotype/Abf1 wild type control
type: EFO_0000001
property type: genotype
property value: Abf1 wild type control

YOL019W
type: EnsemblDatabaseReference

YHP1
type: EnsemblDatabaseReference

4862_at
type: EFO_0005072
part of: A-AFFY-27

OPI10 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1109567866552
p value: 0.0398686506743613
refers to: OPI10
refers to: 8575_at
t statistic: 3.91675783789575

10619_at
type: EFO_0005072
part of: A-AFFY-27

MLP1
type: EnsemblDatabaseReference

5620_at
type: EFO_0005072
part of: A-AFFY-27

YIR043C
type: EnsemblDatabaseReference

LEU4
type: EnsemblDatabaseReference

4411_at
type: EFO_0005072
part of: A-AFFY-27

YJR008W
type: EnsemblDatabaseReference

RPS7B DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.93479529299581
p value: 0.00965008510555405
refers to: RPS7B
refers to: 8936_at
t statistic: -8.32596092306401

CYC7 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.56363962856824
p value: 0.0402637197719677
refers to: CYC7
refers to: 5751_at
t statistic: 3.90308906123123

5335_at
type: EFO_0005072
part of: A-AFFY-27

8936_at
type: EFO_0005072
part of: A-AFFY-27

YPK9
type: EnsemblDatabaseReference

CPR4 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.47412180922464
p value: 0.0242202404765135
refers to: CPR4
refers to: 6811_at
t statistic: -4.74588071699695

5680_at
type: EFO_0005072
part of: A-AFFY-27

4929_at
type: EFO_0005072
part of: A-AFFY-27

PSY1
type: EnsemblDatabaseReference

MET6 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.67131604946543
p value: 0.0329270624780656
refers to: MET6
refers to: 5620_at
t statistic: -4.20158990321938

RPL14B
type: EnsemblDatabaseReference

8235_at
type: EFO_0005072
part of: A-AFFY-27

TNA1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.40278629081915
p value: 0.016629790336552
refers to: TNA1
refers to: 4736_at
t statistic: -5.72627045610143

RPL18B DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.52335264814066
p value: 0.01992438583438
refers to: 9184_at
refers to: RPL18B
t statistic: -5.14695010260837

5333_at
type: EFO_0005072
part of: A-AFFY-27

ATG8 UP in 'Abf1 mutant' vs 'Abf1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27057487275265
p value: 0.0384582948683036
refers to: ATG8
refers to: 7464_at
t statistic: 6.30565590330916

ZRT1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.80305734421967
p value: 0.0240668904545923
refers to: ZRT1
refers to: 2252_g_at
t statistic: -4.7675082652146

10502_at
type: EFO_0005072
part of: A-AFFY-27

YGR021W
type: EnsemblDatabaseReference

CAN1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.35498880267705
p value: 0.0185998694944986
refers to: CAN1
refers to: 5771_at
t statistic: -5.34457276759729

NPL3
type: EnsemblDatabaseReference

(Assay) Abf1 ts 37 C rep1
type: Assay
identifier: Abf1 ts 37 C rep1
has participant: A-AFFY-27

(Assay) Rap1 wt 37 C rep2
type: Assay
identifier: Rap1 wt 37 C rep2
has participant: A-AFFY-27

10018_at
type: EFO_0005072
part of: A-AFFY-27

ARO9
type: EnsemblDatabaseReference

TIP1
type: EnsemblDatabaseReference

RPL7A
type: EnsemblDatabaseReference

MET17
type: EnsemblDatabaseReference

DIA4
type: EnsemblDatabaseReference

YGL039W
type: EnsemblDatabaseReference

4078_i_at
type: EFO_0005072
part of: A-AFFY-27

10301_at
type: EFO_0005072
part of: A-AFFY-27

YRA1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.32787743442346
p value: 0.0227331157521901
refers to: YRA1
refers to: 6078_at
t statistic: -4.91215215828334

ECM33 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.54458170374498
p value: 0.0426278141348439
refers to: ECM33
refers to: 7301_at
t statistic: -3.77410283041196

YKR012C
type: EnsemblDatabaseReference

YGL188C UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.37078917111358
p value: 0.0239104246277105
refers to: YGL188C
refers to: 5192_at
t statistic: 4.7896806029994

2437_s_at
type: EFO_0005072
part of: A-AFFY-27

PGA1
type: EnsemblDatabaseReference

HXT2
type: EnsemblDatabaseReference

MET14 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.58609528287922
p value: 0.0299096854182523
refers to: MET14
refers to: 10563_at
t statistic: -4.4094722201315

5076_f_at
type: EFO_0005072
part of: A-AFFY-27

10664_at
type: EFO_0005072
part of: A-AFFY-27

YNL146C-A
type: EnsemblDatabaseReference

6669_at
type: EFO_0005072
part of: A-AFFY-27

GIC1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14510651394163
p value: 0.0329270624780656
refers to: 4489_at
refers to: GIC1
t statistic: -4.18964035784221

OM45
type: EnsemblDatabaseReference

6304_at
type: EFO_0005072
part of: A-AFFY-27

RNR4
type: EnsemblDatabaseReference

8981_at
type: EFO_0005072
part of: A-AFFY-27

OPI3 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -3.99701081598205
p value: 0.00898284676757532
refers to: OPI3
refers to: 10957_at
t statistic: -8.78536134583887

KSH1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.48433669151003
p value: 0.0144158860488841
refers to: KSH1
refers to: 8774_at
t statistic: -6.50465638096156

FKS1
type: EnsemblDatabaseReference

GUP1
type: EnsemblDatabaseReference

5075_i_at
type: EFO_0005072
part of: A-AFFY-27

7460_at
type: EFO_0005072
part of: A-AFFY-27

YDR476C
type: EnsemblDatabaseReference

YBL059W UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.50950499156518
p value: 0.0292804534004822
refers to: YBL059W
refers to: 7438_at
t statistic: 4.44469910074317

7261_at
type: EFO_0005072
part of: A-AFFY-27

ACT1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1428271383168
p value: 0.0317711777911892
refers to: ACT1
refers to: AFFX-YFL039CM_at
t statistic: -4.30570365596445

FMC1
type: EnsemblDatabaseReference

MET5 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.73416305538756
p value: 0.032207037612231
refers to: MET5
refers to: 10885_at
t statistic: -4.2444856031804

YPL113C
type: EnsemblDatabaseReference

PUT1
type: EnsemblDatabaseReference

ORC6
type: EnsemblDatabaseReference

2572_s_at
type: EFO_0005072
part of: A-AFFY-27

OPI10
type: EnsemblDatabaseReference

9889_i_at
type: EFO_0005072
part of: A-AFFY-27

ICS2
type: EnsemblDatabaseReference

DNF2
type: EnsemblDatabaseReference

PAB1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21101241356509
p value: 0.0239104246277105
refers to: PAB1
refers to: 5558_at
t statistic: -4.80995075948092

ECM33
type: EnsemblDatabaseReference

snR70
type: EnsemblDatabaseReference

SFG1
type: EnsemblDatabaseReference

5394_at
type: EFO_0005072
part of: A-AFFY-27

7961_f_at
type: EFO_0005072
part of: A-AFFY-27

AVT4 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.50513156663183
p value: 0.0138887762396106
refers to: 8976_at
refers to: AVT4
t statistic: -6.68442511792241

POP8
type: EnsemblDatabaseReference

TEL2
type: EnsemblDatabaseReference

YIR043C UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.42228021501845
p value: 0.0415869407253946
refers to: 4078_i_at
refers to: YIR043C
t statistic: 3.84836975514977

7025_at
type: EFO_0005072
part of: A-AFFY-27

ALD3
type: EnsemblDatabaseReference

AFFX-YFL039C5_at
type: EFO_0005072
part of: A-AFFY-27

RPL17B
type: EnsemblDatabaseReference

2252_g_at
type: EFO_0005072
part of: A-AFFY-27

DBP2
type: EnsemblDatabaseReference

ASC1
type: EnsemblDatabaseReference

11203_i_at
type: EFO_0005072
part of: A-AFFY-27

TOS6
type: EnsemblDatabaseReference

RPS25B
type: EnsemblDatabaseReference

YMR027W
type: EnsemblDatabaseReference

4736_at
type: EFO_0005072
part of: A-AFFY-27

HXK2
type: EnsemblDatabaseReference

5642_at
type: EFO_0005072
part of: A-AFFY-27

GAS3
type: EnsemblDatabaseReference

2948_s_at
type: EFO_0005072
part of: A-AFFY-27

YOL019W
type: EnsemblDatabaseReference

PGI1
type: EnsemblDatabaseReference

YPK9 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.49475416965512
p value: 0.0403094313833029
refers to: YPK9
refers to: 2578_s_at
t statistic: -3.89367816008105

SRS2
type: EnsemblDatabaseReference

RNR4 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.30190247721959
p value: 0.0344805580725409
refers to: RNR4
refers to: 4835_at
t statistic: -4.14528287692782

2382_s_at
type: EFO_0005072
part of: A-AFFY-27

PGI1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.68458609435383
p value: 0.0329270624780656
refers to: PGI1
refers to: 7152_at
t statistic: -4.19604445742658

PCA1
type: EnsemblDatabaseReference

MLP1
type: EnsemblDatabaseReference

8759_at
type: EFO_0005072
part of: A-AFFY-27

ISC1
type: EnsemblDatabaseReference

RTS3 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.35745409489673
p value: 0.032207037612231
refers to: RTS3
refers to: 4862_at
t statistic: -4.24327050174436

YIR043C
type: EnsemblDatabaseReference

IMD1
type: EnsemblDatabaseReference

10672_at
type: EFO_0005072
part of: A-AFFY-27

RPL7A DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.10818935800423
p value: 0.00898284676757532
refers to: RPL7A
refers to: 5075_i_at
t statistic: -9.7207862291061

8593_at
type: EFO_0005072
part of: A-AFFY-27

(Factor value) GENOTYPE/Abf1 mutant
type: EFO_0000001
property type: GENOTYPE
property value: Abf1 mutant

4898_at
type: EFO_0005072
part of: A-AFFY-27

11180_at
type: EFO_0005072
part of: A-AFFY-27

ATG8
type: EnsemblDatabaseReference

PSY1
type: EnsemblDatabaseReference

11263_f_at
type: EFO_0005072
part of: A-AFFY-27

MMR1
type: EnsemblDatabaseReference

SIM1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.38470978422382
p value: 0.0146263046884895
refers to: 4233_at
refers to: SIM1
t statistic: -6.15708061981587

MDL2
type: EnsemblDatabaseReference

8359_at
type: EFO_0005072
part of: A-AFFY-27

5008_at
type: EFO_0005072
part of: A-AFFY-27

2911_s_at
type: EFO_0005072
part of: A-AFFY-27

SFG1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.75743522905206
p value: 0.0426278141348439
refers to: SFG1
refers to: 8251_at
t statistic: -3.79212215170927

10575_at
type: EFO_0005072
part of: A-AFFY-27

6812_at
type: EFO_0005072
part of: A-AFFY-27

RPL18B
type: EnsemblDatabaseReference

YER137C
type: EnsemblDatabaseReference

HXK2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.69512797685963
p value: 0.0415869407253946
refers to: HXK2
refers to: 5260_at
t statistic: -3.84258820352903

TOS1
type: EnsemblDatabaseReference

TEC1
type: EnsemblDatabaseReference

HHO1
type: EnsemblDatabaseReference

ARO10
type: EnsemblDatabaseReference

RPS1A DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.95801667700443
p value: 0.0120394589537376
refers to: 9889_i_at
refers to: RPS1A
t statistic: -7.39629973505001

MET5
type: EnsemblDatabaseReference

9712_at
type: EFO_0005072
part of: A-AFFY-27

CDC26 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.16449466777216
p value: 0.0352176653124055
refers to: CDC26
refers to: 5335_at
t statistic: 4.08737232495191

NPL3
type: EnsemblDatabaseReference

ERG25 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.58241300723626
p value: 0.0461420856104351
refers to: 4941_at
refers to: ERG25
t statistic: -3.68581823126461

RPA190
type: EnsemblDatabaseReference

10885_at
type: EFO_0005072
part of: A-AFFY-27

11030_at
type: EFO_0005072
part of: A-AFFY-27

6560_at
type: EFO_0005072
part of: A-AFFY-27

OM45 UP in 'Abf1 mutant' vs 'Abf1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 2.18612545957079
p value: 0.0384582948683036
refers to: OM45
refers to: 4220_at
t statistic: 6.44046239645252

9513_at
type: EFO_0005072
part of: A-AFFY-27

RPL7A
type: EnsemblDatabaseReference

9418_at
type: EFO_0005072
part of: A-AFFY-27

YDR034W-B
type: EnsemblDatabaseReference

ERC1
type: EnsemblDatabaseReference

INO2
type: EnsemblDatabaseReference

JNM1
type: EnsemblDatabaseReference

3626_i_at
type: EFO_0005072
part of: A-AFFY-27

TOS6 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.12583335436453
p value: 0.0481077495067575
refers to: TOS6
refers to: 9185_at
t statistic: -3.63978264457079

7880_at
type: EFO_0005072
part of: A-AFFY-27

(Assay) Abf1 wt 37 C rep2
type: Assay
identifier: Abf1 wt 37 C rep2
has participant: A-AFFY-27

7898_at
type: EFO_0005072
part of: A-AFFY-27

4098_at
type: EFO_0005072
part of: A-AFFY-27

4235_at
type: EFO_0005072
part of: A-AFFY-27

9312_at
type: EFO_0005072
part of: A-AFFY-27

HOM2
type: EnsemblDatabaseReference

COS10
type: EnsemblDatabaseReference

OM45
type: EnsemblDatabaseReference

NDL1
type: EnsemblDatabaseReference

AIM33
type: EnsemblDatabaseReference

COS6
type: EnsemblDatabaseReference

MOG1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.47423216926344
p value: 0.0104858570992875
refers to: MOG1
refers to: 10958_at
t statistic: -7.80302721154016

RCK2
type: EnsemblDatabaseReference

YDR476C
type: EnsemblDatabaseReference

OST3 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.05341859899597
p value: 0.0486887880824326
refers to: 8466_at
refers to: OST3
t statistic: -3.61437737099669

HIS3
type: EnsemblDatabaseReference

4233_at
type: EFO_0005072
part of: A-AFFY-27

PET191
type: EnsemblDatabaseReference

HOM2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.09582079241297
p value: 0.0266644262170329
refers to: HOM2
refers to: 6304_at
t statistic: -4.58563085441556

4994_at
type: EFO_0005072
part of: A-AFFY-27

2970_s_at
type: EFO_0005072
part of: A-AFFY-27

5719_at
type: EFO_0005072
part of: A-AFFY-27

ACT1
type: EnsemblDatabaseReference

BTN2 UP in 'Abf1 mutant' vs 'Abf1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.85801955883792
p value: 0.0356278709294977
refers to: BTN2
refers to: 4842_at
t statistic: 7.78686418436021

TTI1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.30025599058721
p value: 0.0244930938901174
refers to: TTI1
refers to: 10619_at
t statistic: -4.71052444182841

CDC26
type: EnsemblDatabaseReference

10085_at
type: EFO_0005072
part of: A-AFFY-27

NUP49
type: EnsemblDatabaseReference

RPS0B
type: EnsemblDatabaseReference

6010_at
type: EFO_0005072
part of: A-AFFY-27

RPL13A
type: EnsemblDatabaseReference

(Assay) Rap1 wt 37 C rep1
type: Assay
identifier: Rap1 wt 37 C rep1
has participant: A-AFFY-27

TTI1
type: EnsemblDatabaseReference

GLY1
type: EnsemblDatabaseReference

PSY1 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10834707408113
p value: 0.0426278141348439
refers to: PSY1
refers to: 10664_at
t statistic: 3.77803988977091

RPL14B DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.83025721278813
p value: 0.0167666439947131
refers to: RPL14B
refers to: 4515_i_at
t statistic: -5.64160313594213

TEL2
type: EnsemblDatabaseReference

SCW10
type: EnsemblDatabaseReference

SAM3
type: EnsemblDatabaseReference

SRL1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.70020571853865
p value: 0.0144158860488841
refers to: SRL1
refers to: 8313_at
t statistic: -6.51415286910905

FAS2
type: EnsemblDatabaseReference

ACT1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.29062970179875
p value: 0.0449302584040966
refers to: ACT1
refers to: AFFX-YFL039C5_at
t statistic: -3.71829101303344

SCP1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.80376685812113
p value: 0.0180112385492979
refers to: SCP1
refers to: 8166_at
t statistic: -5.50952839719831

ENV9
type: EnsemblDatabaseReference

RCK2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.46255529385366
p value: 0.0351520539989635
refers to: RCK2
refers to: 2911_s_at
t statistic: -4.10654991796495

AIM33 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.28510117150413
p value: 0.0146263046884895
refers to: AIM33
refers to: 9712_at
t statistic: 6.10140449799659

6077_at
type: EFO_0005072
part of: A-AFFY-27

TAF2
type: EnsemblDatabaseReference

4842_at
type: EFO_0005072
part of: A-AFFY-27

HTB2
type: EnsemblDatabaseReference

SVS1
type: EnsemblDatabaseReference

LCL2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.85329392029113
p value: 0.0101719338482137
refers to: LCL2
refers to: 10223_at
t statistic: -8.08523069337317

YJL218W
type: EnsemblDatabaseReference

YLR040C
type: EnsemblDatabaseReference

PHO4 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2907095937548
p value: 0.0369614771052655
refers to: 5333_at
refers to: PHO4
t statistic: -4.02609631275969

HXK2
type: EnsemblDatabaseReference

SNF3
type: EnsemblDatabaseReference

QDR2
type: EnsemblDatabaseReference

PMI40 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.50261807645118
p value: 0.0299170841422591
refers to: 5702_at
refers to: PMI40
t statistic: -4.39028911150817

YLR040C UP in 'Abf1 mutant' vs 'Abf1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.59816536012011
p value: 0.037636743816916
refers to: 10292_at
refers to: YLR040C
t statistic: 6.91559644171579

ORC6 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.20752280349957
p value: 0.0475909827993953
refers to: ORC6
refers to: 4411_at
t statistic: 3.65763540487897

PUB1
type: EnsemblDatabaseReference

GAS3 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.73295791099073
p value: 0.0417864334724781
refers to: GAS3
refers to: 9397_at
t statistic: -3.8277897512356

MUP1
type: EnsemblDatabaseReference

9010_at
type: EFO_0005072
part of: A-AFFY-27

DBP2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.41249239495119
p value: 0.0233750899158869
refers to: 8964_at
refers to: DBP2
t statistic: -4.86131973997202

ISC1
type: EnsemblDatabaseReference

FMP43
type: EnsemblDatabaseReference

PMI40
type: EnsemblDatabaseReference

RPL7B
type: EnsemblDatabaseReference

IMD1
type: EnsemblDatabaseReference

DNF2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.40952508808162
p value: 0.032207037612231
refers to: DNF2
refers to: 2382_s_at
t statistic: -4.24268015523479

BUD4
type: EnsemblDatabaseReference

8268_at
type: EFO_0005072
part of: A-AFFY-27

CIS3
type: EnsemblDatabaseReference

HUG1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.63359759971805
p value: 0.01992438583438
refers to: HUG1
refers to: 9293_at
t statistic: -5.13555133533709

MET28 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.43111101267132
p value: 0.0153670481879542
refers to: MET28
refers to: 4098_at
t statistic: -5.97926115082188

YDR089W
type: EnsemblDatabaseReference

FMC1 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.48168451068996
p value: 0.0498143932383415
refers to: FMC1
refers to: 4213_at
t statistic: 3.56960172784601

IMG2
type: EnsemblDatabaseReference

ARO9 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.24247913068423
p value: 0.015993455183113
refers to: 4386_at
refers to: ARO9
t statistic: 5.89349110470169

CAN1
type: EnsemblDatabaseReference

SPA2
type: EnsemblDatabaseReference

(Sample) genotype/Rap1 mutant
type: EFO_0000001
property type: genotype
property value: Rap1 mutant

QDR2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.49706841423455
p value: 0.0317711777911892
refers to: QDR2
refers to: 4235_at
t statistic: -4.29919547411571

RPS22B
type: EnsemblDatabaseReference

PIC2 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2135691706549
p value: 0.0288297101774726
refers to: PIC2
refers to: 5665_at
t statistic: 4.48316088035745

6038_at
type: EFO_0005072
part of: A-AFFY-27

YER137C
type: EnsemblDatabaseReference

CHL1
type: EnsemblDatabaseReference

2607_s_at
type: EFO_0005072
part of: A-AFFY-27

ARG5,6
type: EnsemblDatabaseReference

11008_at
type: EFO_0005072
part of: A-AFFY-27

8879_at
type: EFO_0005072
part of: A-AFFY-27

YAR029W UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.50873851673245
p value: 0.0403094313833029
refers to: YAR029W
refers to: 11291_at
t statistic: 3.89255221378243

RAD28
type: EnsemblDatabaseReference

ARO10
type: EnsemblDatabaseReference

SRL1
type: EnsemblDatabaseReference

MRPL27
type: EnsemblDatabaseReference

RPA190
type: EnsemblDatabaseReference

5665_at
type: EFO_0005072
part of: A-AFFY-27

TAF2 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.41845226312352
p value: 0.0187555833517792
refers to: TAF2
refers to: 6830_at
t statistic: 5.21788544870504

ALG3 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.13155263355324
p value: 0.016629790336552
refers to: 7460_at
refers to: ALG3
t statistic: -5.75214597462623

ARE1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.07500618742692
p value: 0.0299096854182523
refers to: 6837_at
refers to: ARE1
t statistic: -4.39665693739779

RTS3
type: EnsemblDatabaseReference

ARG3
type: EnsemblDatabaseReference

LCL2
type: EnsemblDatabaseReference

KAP120 DOWN in 'Abf1 mutant' vs 'Abf1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.35057767243833
p value: 0.0384582948683036
refers to: KAP120
refers to: 7900_at
t statistic: -6.14117083405534

MHR1
type: EnsemblDatabaseReference

5413_at
type: EFO_0005072
part of: A-AFFY-27

YOR192C-C
type: EnsemblDatabaseReference

JNM1
type: EnsemblDatabaseReference

TNA1
type: EnsemblDatabaseReference

OPI3
type: EnsemblDatabaseReference

2376_s_at
type: EFO_0005072
part of: A-AFFY-27

Analysis of 'Rap1 mutant' vs 'Rap1 wild type control'
type: MicroarrayDifferentialExpressionAnalysis

YBL059W
type: EnsemblDatabaseReference

CLB1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08368018326114
p value: 0.0341351751949644
refers to: CLB1
refers to: 4898_at
t statistic: -4.15776231235679

8313_at
type: EFO_0005072
part of: A-AFFY-27

YOR292C
type: EnsemblDatabaseReference

7208_at
type: EFO_0005072
part of: A-AFFY-27

MLP1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.27770132894668
p value: 0.0391694629620084
refers to: 2997_s_at
refers to: MLP1
t statistic: -3.95672392194305

SAM3 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5852473330654
p value: 0.0283542449810721
refers to: SAM3
refers to: 2600_s_at
t statistic: -4.50966616904525

AIM33
type: EnsemblDatabaseReference

ALD3 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.38296031824502
p value: 0.0239143338899383
refers to: ALD3
refers to: 9481_at
t statistic: 4.78101320879813

ERG25
type: EnsemblDatabaseReference

7907_at
type: EFO_0005072
part of: A-AFFY-27

ARO10 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 2.21667261579013
p value: 0.0104858570992875
refers to: ARO10
refers to: 6077_at
t statistic: 7.76641999630839

COS6
type: EnsemblDatabaseReference

9633_at
type: EFO_0005072
part of: A-AFFY-27

YKL177W UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.87000665085572
p value: 0.0166275246646428
refers to: YKL177W
refers to: 10742_at
t statistic: 5.83481547242687

HIS3
type: EnsemblDatabaseReference

9184_at
type: EFO_0005072
part of: A-AFFY-27

3234_at
type: EFO_0005072
part of: A-AFFY-27

RAD28 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27547231040584
p value: 0.0216184658588177
refers to: RAD28
refers to: 6444_at
t statistic: 4.97301963383304

RPS0B DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.76629842006383
p value: 0.0417864334724781
refers to: RPS0B
refers to: 10301_at
t statistic: -3.83331444190696

UTP20
type: EnsemblDatabaseReference

YOR192C-C DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.41079473410901
p value: 0.0426278141348439
refers to: YOR192C-C
refers to: 8118_i_at
t statistic: -3.78247562638767

(Assay) Rap1 ts 37 C rep1
type: Assay
identifier: Rap1 ts 37 C rep1
has participant: A-AFFY-27

(Assay) Abf1 wt 37 C rep1
type: Assay
identifier: Abf1 wt 37 C rep1
has participant: A-AFFY-27

NUP49
type: EnsemblDatabaseReference

RPR1
type: EnsemblDatabaseReference

SRS2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.41094061420011
p value: 0.0391694629620084
refers to: 3058_s_at
refers to: SRS2
t statistic: -3.95476524071165

IDP2
type: EnsemblDatabaseReference

IMG2 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.08295487754765
p value: 0.0410348159481588
refers to: IMG2
refers to: 6812_at
t statistic: 3.86604318870877

10742_at
type: EFO_0005072
part of: A-AFFY-27

7290_at
type: EFO_0005072
part of: A-AFFY-27

RPR1
type: EnsemblDatabaseReference

GLY1
type: EnsemblDatabaseReference

YDR034W-B
type: EnsemblDatabaseReference

TTI1
type: EnsemblDatabaseReference

5113_at
type: EFO_0005072
part of: A-AFFY-27

8360_at
type: EFO_0005072
part of: A-AFFY-27

SCW10
type: EnsemblDatabaseReference

RPA190 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.92176463899411
p value: 0.0216184658588177
refers to: RPA190
refers to: 2593_s_at
t statistic: -4.97721770949125

2600_s_at
type: EFO_0005072
part of: A-AFFY-27

MOG1
type: EnsemblDatabaseReference

10957_at
type: EFO_0005072
part of: A-AFFY-27

YBR197C
type: EnsemblDatabaseReference

8973_at
type: EFO_0005072
part of: A-AFFY-27

ENV9
type: EnsemblDatabaseReference

8774_at
type: EFO_0005072
part of: A-AFFY-27

KRE6
type: EnsemblDatabaseReference

TAF2
type: EnsemblDatabaseReference

RPS7B
type: EnsemblDatabaseReference

RPL17B DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.37715711757056
p value: 0.0167666439947131
refers to: RPL17B
refers to: 11203_i_at
t statistic: -5.65840689868492

HTB2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.05239267348533
p value: 0.0209282772446802
refers to: 7359_at
refers to: HTB2
t statistic: -5.06152043982164

8575_at
type: EFO_0005072
part of: A-AFFY-27

AVT4
type: EnsemblDatabaseReference

9481_at
type: EFO_0005072
part of: A-AFFY-27

MUP1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.31106571393702
p value: 0.0146263046884895
refers to: MUP1
refers to: 4936_at
t statistic: -6.15177392716968

CLB1
type: EnsemblDatabaseReference

YOL019W DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.55212049363401
p value: 0.0440167455167186
refers to: YOL019W
refers to: 8588_at
t statistic: -3.73633326239701

QDR2
type: EnsemblDatabaseReference

KAP120
type: EnsemblDatabaseReference

YEL023C UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.34563407749958
p value: 0.0187555833517792
refers to: 5767_at
refers to: YEL023C
t statistic: 5.2407749053841

MUP1
type: EnsemblDatabaseReference

STR3
type: EnsemblDatabaseReference

FMP43
type: EnsemblDatabaseReference

PMI40
type: EnsemblDatabaseReference

KRE6 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.60407751296491
p value: 0.0358777102272905
refers to: KRE6
refers to: 7603_at
t statistic: -4.05416601021011

YKR012C UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 2.11250569246436
p value: 0.0122402347486905
refers to: YKR012C
refers to: 10575_at
t statistic: 7.12413310590879

6449_at
type: EFO_0005072
part of: A-AFFY-27

9946_at
type: EFO_0005072
part of: A-AFFY-27

MRPL24
type: EnsemblDatabaseReference

YNL146C-A
type: EnsemblDatabaseReference

GIC1
type: EnsemblDatabaseReference

(Factor value) GENOTYPE/Rap1 wild type control
type: EFO_0000001
property type: GENOTYPE
property value: Rap1 wild type control

LEU4
type: EnsemblDatabaseReference

RAX1
type: EnsemblDatabaseReference

IMG2
type: EnsemblDatabaseReference

YJR008W
type: EnsemblDatabaseReference

E-GEOD-6073
type: microarray 1colour mrna differential
RO_0002162: Saccharomyces cerevisiae
description: Abf1 and Rap1 are General Regulatory Factors that contribute to transcriptional activation of a large number of genes, as well as to replication, silencing, and telomere structure in yeast. In spite of their widespread roles in transcription, the scope of their functional targets genome-wide has not been previously determined. We have used microarrays to examine the contribution of these essential GRFs to transcription genome-wide, by using ts mutants that dissociate from their binding sites at 37 C. We combined this data with published ChIP-chip studies and motif analysis to identify probable direct targets for Abf1 and Rap1. We also identified a substantial number of genes likely to bind Rap1 or Abf1, but not affected by loss of GRF binding. Interestingly, the results strongly suggest that Rap1 can contribute to gene activation from farther upstream than can Abf1. Also, consistent with previous work, more genes that bind Abf1 are unaffected by loss of binding than those that bind Rap1. Finally, we showed for several such genes that the Abf1 C-terminal region, which contains the putative activation domain, is not needed to confer this peculiar \"memory effect\" that allows continued transcription after loss of Abf1 binding. Experiment Overall Design: Three replicates each of rap1 ts and abf1 ts yeast were grown at 25 C and shifted to 37 C, along with matched wild type controls, prior to RNA isolation. The ts mutants lose DNA binding at 37 C.
uses data from: http://identifiers.org/pubmed/17158163

ADE2
type: EnsemblDatabaseReference

CAN1
type: EnsemblDatabaseReference

IRC18
type: EnsemblDatabaseReference

4763_at
type: EFO_0005072
part of: A-AFFY-27

7603_at
type: EFO_0005072
part of: A-AFFY-27

NIT3
type: EnsemblDatabaseReference

YRA1
type: EnsemblDatabaseReference

YOR292C UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.40541382946559
p value: 0.0145911962431964
refers to: 8268_at
refers to: YOR292C
t statistic: 6.3949673312755

GCD11 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1900148932316
p value: 0.0417864334724781
refers to: GCD11
refers to: 5680_at
t statistic: -3.82073551194065

7068_at
type: EFO_0005072
part of: A-AFFY-27

ARG1
type: EnsemblDatabaseReference

11114_at
type: EFO_0005072
part of: A-AFFY-27

RPL14B
type: EnsemblDatabaseReference

PHO4
type: EnsemblDatabaseReference

ARG5,6
type: EnsemblDatabaseReference

PIC2
type: EnsemblDatabaseReference

8025_at
type: EFO_0005072
part of: A-AFFY-27

FMP43 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2272103423937
p value: 0.0458742007996546
refers to: 4763_at
refers to: FMP43
t statistic: 3.69331400621276

RAX1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3311292723653
p value: 0.0421434106327713
refers to: RAX1
refers to: 8235_at
t statistic: -3.80669714894921

7464_at
type: EFO_0005072
part of: A-AFFY-27

SRL1
type: EnsemblDatabaseReference

5771_at
type: EFO_0005072
part of: A-AFFY-27

FKS1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.29667850775402
p value: 0.0315165961607596
refers to: 2841_s_at
refers to: FKS1
t statistic: -4.32656765083515

2253_s_at
type: EFO_0005072
part of: A-AFFY-27

7152_at
type: EFO_0005072
part of: A-AFFY-27

TUB2
type: EnsemblDatabaseReference

YMR027W DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.52366368544469
p value: 0.0138887762396106
refers to: YMR027W
refers to: 9604_at
t statistic: -6.82531752493577

RTS3
type: EnsemblDatabaseReference

(Sample) genotype/Abf1 mutant
type: EFO_0000001
property type: genotype
property value: Abf1 mutant

RPL7B DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4199649721812
p value: 0.0138887762396106
refers to: RPL7B
refers to: 7960_i_at
t statistic: -6.74017221484721

YGR093W
type: EnsemblDatabaseReference

SVS1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.28792347155096
p value: 0.0166284123746145
refers to: SVS1
refers to: 7907_at
t statistic: -5.79451798179488

ARO9
type: EnsemblDatabaseReference

TNA1
type: EnsemblDatabaseReference

DIA4
type: EnsemblDatabaseReference

GCD11
type: EnsemblDatabaseReference

ADE2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03168473970829
p value: 0.0482113102820834
refers to: ADE2
refers to: 8420_at
t statistic: -3.63234029612029

5820_at
type: EFO_0005072
part of: A-AFFY-27

PGA1
type: EnsemblDatabaseReference

YOR292C
type: EnsemblDatabaseReference

YOR203W
type: EnsemblDatabaseReference

ERG25
type: EnsemblDatabaseReference

4213_at
type: EFO_0005072
part of: A-AFFY-27

KES1
type: EnsemblDatabaseReference

RPS1A
type: EnsemblDatabaseReference

HUG1
type: EnsemblDatabaseReference

ASC1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.22508653759417
p value: 0.0245540825271007
refers to: 9513_at
refers to: ASC1
t statistic: -4.69084731656068

11075_at
type: EFO_0005072
part of: A-AFFY-27

THI7
type: EnsemblDatabaseReference

FKS1
type: EnsemblDatabaseReference

YGL188C
type: EnsemblDatabaseReference

YDR476C DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.41040692581459
p value: 0.048953515391912
refers to: YDR476C
refers to: 5990_at
t statistic: -3.60320938541481

SPA2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5770489265549
p value: 0.0458742007996546
refers to: SPA2
refers to: 2948_s_at
t statistic: -3.69336189242989

BTN2
type: EnsemblDatabaseReference

POP8 DOWN in 'Abf1 mutant' vs 'Abf1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.65401169886415
p value: 0.0372190957674851
refers to: POP8
refers to: 7389_at
t statistic: -7.15235328066992

ALG3
type: EnsemblDatabaseReference

ARG1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.15181066659994
p value: 0.0138887762396106
refers to: 8593_at
refers to: ARG1
t statistic: -6.73357381800237

TUB2 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.33946128079141
p value: 0.048953515391912
refers to: TUB2
refers to: 5394_at
t statistic: -3.6018674266773

PUT1
type: EnsemblDatabaseReference

10563_at
type: EFO_0005072
part of: A-AFFY-27

DNF2
type: EnsemblDatabaseReference

OST3
type: EnsemblDatabaseReference

ECM33
type: EnsemblDatabaseReference

YOR192C-C
type: EnsemblDatabaseReference

JNM1 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.29295912499508
p value: 0.0345125745011256
refers to: 9344_at
refers to: JNM1
t statistic: 4.13005261492058

KES1 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.65378007043461
p value: 0.0410348159481588
refers to: KES1
refers to: 7880_at
t statistic: -3.86383665260201

MDL2 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03346173809839
p value: 0.0323943677508954
refers to: MDL2
refers to: 8025_at
t statistic: 4.23094424369512

POP8
type: EnsemblDatabaseReference

PET191 UP in 'Rap1 mutant' vs 'Rap1 wild type control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14792625587238
p value: 0.0289198190958285
refers to: PET191
refers to: 11008_at
t statistic: 4.47402682179258

7960_i_at
type: EFO_0005072
part of: A-AFFY-27

6902_at
type: EFO_0005072
part of: A-AFFY-27

2468_s_at
type: EFO_0005072
part of: A-AFFY-27

CLB1
type: EnsemblDatabaseReference

2841_s_at
type: EFO_0005072
part of: A-AFFY-27

2578_s_at
type: EFO_0005072
part of: A-AFFY-27

RPS25B
type: EnsemblDatabaseReference

YEL023C
type: EnsemblDatabaseReference

STR3 DOWN in 'Rap1 mutant' vs 'Rap1 wild type control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.94566700019022
p value: 0.0187555833517792
refers to: STR3
refers to: 5196_at
t statistic: -5.22414236791883

PGI1
type: EnsemblDatabaseReference

STR3
type: EnsemblDatabaseReference

YKL177W
type: EnsemblDatabaseReference