AT5G03350
type: EnsemblDatabaseReference

249867_at
type: EFO_0005072
part of: A-AFFY-2

AT1G56220 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4421771
p value: 1.56575624997766E-4
refers to: 256225_at
refers to: AT1G56220
t statistic: 7.07575537781055

AT4G17245
type: EnsemblDatabaseReference

ATTPS10 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.23558583333333
p value: 1.52115301620281E-6
refers to: 264246_at
refers to: ATTPS10
t statistic: 12.6367871361118

AT4G11900 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.18824318333334
p value: 1.59059424052648E-6
refers to: AT4G11900
refers to: 254870_at
t statistic: 12.4736667180751

AKINBETA1
type: EnsemblDatabaseReference

256100_at
type: EFO_0005072
part of: A-AFFY-2

AT1G23390
type: EnsemblDatabaseReference

AT4G05070
type: EnsemblDatabaseReference

AT1G80440
type: EnsemblDatabaseReference

AT3G06070
type: EnsemblDatabaseReference

AT3G47160
type: EnsemblDatabaseReference

AT3G15650
type: EnsemblDatabaseReference

WRKY54
type: EnsemblDatabaseReference

ATOFP16
type: EnsemblDatabaseReference

AT1G19960
type: EnsemblDatabaseReference

ATSOFL1
type: EnsemblDatabaseReference

ACD6
type: EnsemblDatabaseReference

CCL
type: EnsemblDatabaseReference

Arabidopsis thaliana
type: OBI_0100026

AT2G27420 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12073058333333
p value: 3.95976025716291E-4
refers to: AT2G27420
refers to: 265665_at
t statistic: -6.27007692224332

(Assay) Walters_A-06-Kruger-WH3_REP3
type: Assay
has participant: A-AFFY-2

RVE1 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.08775305
p value: 1.78939855141618E-4
refers to: 250099_at
refers to: RVE1
t statistic: 6.95602953478533

256225_at
type: EFO_0005072
part of: A-AFFY-2

PNP-A
type: EnsemblDatabaseReference

255080_at
type: EFO_0005072
part of: A-AFFY-2

(Assay) Walters_A-08-Kruger-ML2_REP2
type: Assay
has participant: A-AFFY-2

261684_at
type: EFO_0005072
part of: A-AFFY-2

257832_at
type: EFO_0005072
part of: A-AFFY-2

250942_at
type: EFO_0005072
part of: A-AFFY-2

AT3G13062
type: EnsemblDatabaseReference

Analysis of 'tpt-1' vs 'wild type'
type: MicroarrayDifferentialExpressionAnalysis

AT4G17245
type: EnsemblDatabaseReference

AT4G05070
type: EnsemblDatabaseReference

AT4G11900
type: EnsemblDatabaseReference

258270_at
type: EFO_0005072
part of: A-AFFY-2

AT1G80440
type: EnsemblDatabaseReference

CYP96A4
type: EnsemblDatabaseReference

AT1G72820
type: EnsemblDatabaseReference

261221_at
type: EFO_0005072
part of: A-AFFY-2

AT2G29290
type: EnsemblDatabaseReference

AT1G23390
type: EnsemblDatabaseReference

249777_at
type: EFO_0005072
part of: A-AFFY-2

262986_at
type: EFO_0005072
part of: A-AFFY-2

ATTPS10
type: EnsemblDatabaseReference

RPS14
type: EnsemblDatabaseReference

251705_at
type: EFO_0005072
part of: A-AFFY-2

258468_at
type: EFO_0005072
part of: A-AFFY-2

ATTPS11
type: EnsemblDatabaseReference

AT1G19960 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.69656058333333
p value: 7.87459835479984E-4
refers to: AT1G19960
refers to: 261221_at
t statistic: 5.70227103574755

257654_at
type: EFO_0005072
part of: A-AFFY-2

AT3G13062
type: EnsemblDatabaseReference

NIA1 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0729035
p value: 9.28886488889291E-5
refers to: NIA1
refers to: 259681_at
t statistic: 7.59382097129453

AT4G26530 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06481091666667
p value: 3.18034907765752E-4
refers to: AT4G26530
refers to: 253971_at
t statistic: 6.44389929110702

264339_at
type: EFO_0005072
part of: A-AFFY-2

AT1G13750
type: EnsemblDatabaseReference

DEAR3 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.05360991666667
p value: 2.18741226005572E-7
refers to: DEAR3
refers to: 245078_at
t statistic: -17.0106305402303

AT4G24800
type: EnsemblDatabaseReference

AT4G11900
type: EnsemblDatabaseReference

266106_at
type: EFO_0005072
part of: A-AFFY-2

AT1G72820
type: EnsemblDatabaseReference

AT2G27420
type: EnsemblDatabaseReference

245265_at
type: EFO_0005072
part of: A-AFFY-2

AT2G29290
type: EnsemblDatabaseReference

CYP96A4
type: EnsemblDatabaseReference

(Assay) Walters_A-11-Kruger-MH2_REP2
type: Assay
has participant: A-AFFY-2

AT1G78020 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13764833333333
p value: 3.26700081320922E-6
refers to: AT1G78020
refers to: 262162_at
t statistic: -11.3793454390574

ATTPS10
type: EnsemblDatabaseReference

(Sample) genotype/wild type genotype
type: EFO_0000001
property type: genotype
property value: wild type genotype

JMT DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.59745346666667
p value: 2.02825815660656E-4
refers to: JMT
refers to: 261150_at
t statistic: -6.84539563490428

RPS14
type: EnsemblDatabaseReference

AT1G47400 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00529451666666
p value: 0.00319769122839637
refers to: AT1G47400
refers to: 261684_at
t statistic: -4.63694078186802

TBL26
type: EnsemblDatabaseReference

266072_at
type: EFO_0005072
part of: A-AFFY-2

AT3G13062 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21076223333333
p value: 2.69155617868295E-6
refers to: AT3G13062
refers to: 257860_at
t statistic: 11.6497317051073

AT2G24550
type: EnsemblDatabaseReference

AT3G47160 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.12859626666667
p value: 4.13339547650447E-7
refers to: AT3G47160
refers to: 252464_at
t statistic: 15.4853133089357

ATTPS11
type: EnsemblDatabaseReference

254508_at
type: EFO_0005072
part of: A-AFFY-2

AT5G14120
type: EnsemblDatabaseReference

ATCLC-A UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.36262508333333
p value: 4.63949957315511E-7
refers to: ATCLC-A
refers to: 249327_at
t statistic: 14.6959874187902

CYP96A4 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00009245
p value: 1.04438297020466E-6
refers to: CYP96A4
refers to: 248353_at
t statistic: -13.262466504185

AT1G13750
type: EnsemblDatabaseReference

AT4G24800
type: EnsemblDatabaseReference

JMT
type: EnsemblDatabaseReference

ATBETA-AMY DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.40581493333333
p value: 0.0485984864102474
refers to: 245275_at
refers to: ATBETA-AMY
t statistic: -2.75088331512244

AT2G27420
type: EnsemblDatabaseReference

(Assay) Walters_A-03-Kruger-WL3_REP3
type: Assay
has participant: A-AFFY-2

ACD6 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.12767333333333
p value: 3.59007191341702E-4
refers to: 245265_at
refers to: ACD6
t statistic: 6.3464051932514

251221_at
type: EFO_0005072
part of: A-AFFY-2

AT4G17245 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2261472
p value: 3.66645778863305E-6
refers to: AT4G17245
refers to: 245264_at
t statistic: 11.2009767007598

AT4G20170 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14771966666667
p value: 3.80514172390923E-6
refers to: 254508_at
refers to: AT4G20170
t statistic: -11.1218637701883

255255_at
type: EFO_0005072
part of: A-AFFY-2

TBL26
type: EnsemblDatabaseReference

266279_at
type: EFO_0005072
part of: A-AFFY-2

WRKY70 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.29337315
p value: 0.00514264190086394
refers to: WRKY70
refers to: 251705_at
t statistic: 4.2924176444618

AT2G24550
type: EnsemblDatabaseReference

ATTPS8
type: EnsemblDatabaseReference

AT5G14120
type: EnsemblDatabaseReference

AT3G04210 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1228394
p value: 9.5736012292313E-4
refers to: AT3G04210
refers to: 258537_at
t statistic: 5.53488384754047

(Assay) Walters_A-05-Kruger-WH2_REP2
type: Assay
has participant: A-AFFY-2

LURP1
type: EnsemblDatabaseReference

245275_at
type: EFO_0005072
part of: A-AFFY-2

264400_at
type: EFO_0005072
part of: A-AFFY-2

GASA6 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.16402491666667
p value: 0.0288733665151568
refers to: GASA6
refers to: 260221_at
t statistic: 3.1051157972053

AT3G13310
type: EnsemblDatabaseReference

PNP-A UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06150235
p value: 0.0331966432942769
refers to: PNP-A
refers to: 266070_at
t statistic: 3.00692777852518

JMT
type: EnsemblDatabaseReference

260221_at
type: EFO_0005072
part of: A-AFFY-2

ATBETA-AMY
type: EnsemblDatabaseReference

AT1G72820 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1706065
p value: 7.79391275167208E-6
refers to: 262355_at
refers to: AT1G72820
t statistic: 10.1892256801926

(Assay) Walters_A-02-Kruger-WL2_REP2
type: Assay
has participant: A-AFFY-2

AT4G24800 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45812275
p value: 2.76078992711484E-6
refers to: 254089_at
refers to: AT4G24800
t statistic: 11.6075987167543

(Sample) genotype/tpt-1
type: EFO_0000001
property type: genotype
property value: tpt-1

250099_at
type: EFO_0005072
part of: A-AFFY-2

255604_at
type: EFO_0005072
part of: A-AFFY-2

CNGC12 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.41479353333334
p value: 1.85736107814131E-4
refers to: 263777_at
refers to: CNGC12
t statistic: 6.92481613737322

AT4G05070 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01179881666667
p value: 0.00748356010995727
refers to: AT4G05070
refers to: 255255_at
t statistic: 4.03408474335601

GASA6
type: EnsemblDatabaseReference

ATTPS8
type: EnsemblDatabaseReference

AT3G15650 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1121886
p value: 0.0131469959853685
refers to: AT3G15650
refers to: 258270_at
t statistic: -3.64565241033569

AGP10
type: EnsemblDatabaseReference

261150_at
type: EFO_0005072
part of: A-AFFY-2

ATCLC-A
type: EnsemblDatabaseReference

AT3G62550 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.32029718333333
p value: 9.79459047313515E-5
refers to: AT3G62550
refers to: 251221_at
t statistic: 7.53734675192532

LURP1
type: EnsemblDatabaseReference

(Assay) Walters_A-12-Kruger-MH3_REP3
type: Assay
has participant: A-AFFY-2

AT3G13310
type: EnsemblDatabaseReference

248353_at
type: EFO_0005072
part of: A-AFFY-2

263799_at
type: EFO_0005072
part of: A-AFFY-2

ATEXPA10
type: EnsemblDatabaseReference

(Factor value) GENOTYPE/tpt-1
type: EFO_0000001
property type: GENOTYPE
property value: tpt-1

ATBETA-AMY
type: EnsemblDatabaseReference

(Assay) Walters_A-09-Kruger-ML3_REP3
type: Assay
has participant: A-AFFY-2

ATCTH
type: EnsemblDatabaseReference

CER4
type: EnsemblDatabaseReference

AT1G55960
type: EnsemblDatabaseReference

GASA6
type: EnsemblDatabaseReference

A-AFFY-2
type: EFO_0000269

BGAL1 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04290841666667
p value: 4.45918292674398E-7
refers to: 256772_at
refers to: BGAL1
t statistic: 15.2020356305504

AGP10
type: EnsemblDatabaseReference

252827_at
type: EFO_0005072
part of: A-AFFY-2

ATSOFL1
type: EnsemblDatabaseReference

ATCLC-A
type: EnsemblDatabaseReference

261266_at
type: EFO_0005072
part of: A-AFFY-2

AGP10 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00498563333333
p value: 0.00280886584979523
refers to: AGP10
refers to: 255080_at
t statistic: -4.72938533597371

ATTPS8 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.27480916666667
p value: 2.36025509901117E-6
refers to: ATTPS8
refers to: 264339_at
t statistic: 11.8448010566521

(Sample) developmental stage/Boyes key 3.7
type: EFO_0000001
property type: developmental stage
property value: Boyes key 3.7

J8
type: EnsemblDatabaseReference

RPS14 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.53781433333333
p value: 1.34791092598969E-4
refers to: 245005_at
refers to: RPS14
t statistic: 7.21523290413496

258537_at
type: EFO_0005072
part of: A-AFFY-2

(Sample) organism part/rosette leaves
type: EFO_0001984
property type: organism part
property value: rosette leaves

RAV1 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.20165481666666
p value: 0.0272433610902297
refers to: 259364_at
refers to: RAV1
t statistic: 3.14549908755819

AT5G14120 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01647716666667
p value: 7.21294667407166E-8
refers to: 250217_at
refers to: AT5G14120
t statistic: 19.8491215735761

265724_at
type: EFO_0005072
part of: A-AFFY-2

266656_at
type: EFO_0005072
part of: A-AFFY-2

AT1G13750 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10321343333333
p value: 1.87241842844744E-4
refers to: 256100_at
refers to: AT1G13750
t statistic: 6.91599550988057

245264_at
type: EFO_0005072
part of: A-AFFY-2

ATCSLA01
type: EnsemblDatabaseReference

ATSOFL1 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23657181666667
p value: 4.13858817943923E-7
refers to: ATSOFL1
refers to: 245816_at
t statistic: -15.4138626687426

AKINBETA1
type: EnsemblDatabaseReference

MAM-L UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01898268333333
p value: 8.22519514271048E-4
refers to: MAM-L
refers to: 249867_at
t statistic: 5.66215650997257

CER4
type: EnsemblDatabaseReference

245816_at
type: EFO_0005072
part of: A-AFFY-2

AT1G55960
type: EnsemblDatabaseReference

NIA1
type: EnsemblDatabaseReference

RPS2
type: EnsemblDatabaseReference

AT5G24210
type: EnsemblDatabaseReference

(Assay) Walters_A-07-Kruger-ML1_REP1
type: Assay
has participant: A-AFFY-2

262162_at
type: EFO_0005072
part of: A-AFFY-2

J8
type: EnsemblDatabaseReference

AT4G20170
type: EnsemblDatabaseReference

ATCSLA01 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.33128158333333
p value: 0.00644197428785865
refers to: ATCSLA01
refers to: 245465_at
t statistic: -4.13715658760653

253971_at
type: EFO_0005072
part of: A-AFFY-2

RVE1
type: EnsemblDatabaseReference

ATCSLA01
type: EnsemblDatabaseReference

253309_at
type: EFO_0005072
part of: A-AFFY-2

252464_at
type: EFO_0005072
part of: A-AFFY-2

CYP79B2
type: EnsemblDatabaseReference

WRKY70
type: EnsemblDatabaseReference

254089_at
type: EFO_0005072
part of: A-AFFY-2

251196_at
type: EFO_0005072
part of: A-AFFY-2

ATTPS11 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.50933423333333
p value: 7.21294667407166E-8
refers to: ATTPS11
refers to: 266072_at
t statistic: 19.7733654200267

BGAL1
type: EnsemblDatabaseReference

259681_at
type: EFO_0005072
part of: A-AFFY-2

NIA1
type: EnsemblDatabaseReference

265837_at
type: EFO_0005072
part of: A-AFFY-2

RPS2
type: EnsemblDatabaseReference

(Sample) organism/Arabidopsis thaliana
type: Arabidopsis thaliana
property type: organism
property value: Arabidopsis thaliana

AT1G47400
type: EnsemblDatabaseReference

254870_at
type: EFO_0005072
part of: A-AFFY-2

AT5G24210
type: EnsemblDatabaseReference

246028_at
type: EFO_0005072
part of: A-AFFY-2

(Assay) Walters_A-04-Kruger-WH1_REP1
type: Assay
has participant: A-AFFY-2

GPT2
type: EnsemblDatabaseReference

E-GEOD-5737
type: microarray 1colour mrna differential
RO_0002162: Arabidopsis thaliana
description: The triose-phosphate/phosphate translocator (TPT) of the chloroplast inner envelope membrane mediates the counter-exchange of stromal triose phosphates derived from CO2 fixation with cytosolic phosphate, thus providing the cytosol with precursors for sucrose synthesis. We have isolated an Arabidopsis mutant (tpt-1) in which the gene encoding TPT is disrupted by a T-DNA insertion. During growth in low light tpt-1 plants are phenotypically normal, but in high light photosynthesis is inhibited and growth is retarded relative to wildtype. This mutant compensates for the absence of TPT by diverting photosynthate into starch which is hydrolysed and exported from the chloroplast as glucose that is subsequently phosphorylated by hexokinase. In low light the capacity of the pathway of starch synthesis is sufficient to accommodate the normal rate of CO2 fixation, but in high light it is unable to match the potential rate of CO2 fixation. Consequently, in high light-grown plants there are measurable effects on the redoxstate of several components. Thus, the tpt-1 mutation influences the carbohydrate status within the cell, alters the form in which carbon is received by the cytosol, and changes the redox signals that are important in photosynthetic acclimation.Plants will be grown in a 8h light:16h dark regime at both 400 and 100 ÃÂÃÂÃÂÃÂµmol PAR m-2 s-1. Total RNA will be extracted from pools of individual illuminated leaves from at least eight plants at growth stage 3.70. Leaves will be harvested 2 h into the photoperiod to maximises differences between plant lines in the expression of genes of photosynthesis and carbohydrate metabolism. We anticipate that expression of many genes will be affected by the absence of TPT and by changes in light intensity. However, by comparing differences in transcript levels between wildtype and TPT mutant grown in high light with the differences that occur in plants grown in low light we will discriminate between genes whose expression is aff…
uses data from: pubmed

245005_at
type: EFO_0005072
part of: A-AFFY-2

ATATG8E
type: EnsemblDatabaseReference

ATATG8E UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09366093333333
p value: 4.63949957315511E-7
refers to: 266106_at
refers to: ATATG8E
t statistic: 14.8396826400476

245465_at
type: EFO_0005072
part of: A-AFFY-2

AT4G20170
type: EnsemblDatabaseReference

260287_at
type: EFO_0005072
part of: A-AFFY-2

MAM-L
type: EnsemblDatabaseReference

RVE1
type: EnsemblDatabaseReference

DEAR3
type: EnsemblDatabaseReference

AT1G80440 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15815765
p value: 0.00362836282351515
refers to: 260287_at
refers to: AT1G80440
t statistic: 4.54125709664222

CYP79B2
type: EnsemblDatabaseReference

LURP1 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.22188016666667
p value: 0.00366252391726134
refers to: 265837_at
refers to: LURP1
t statistic: 4.53351016237336

WRKY70
type: EnsemblDatabaseReference

BGAL1
type: EnsemblDatabaseReference

AT1G56220
type: EnsemblDatabaseReference

AT3G06070 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.22097105
p value: 2.88098526345014E-4
refers to: AT3G06070
refers to: 258468_at
t statistic: 6.52667258563623

AT1G23390 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.24246926666667
p value: 2.41610927682557E-5
refers to: 262986_at
refers to: AT1G23390
t statistic: 8.90356402284049

257860_at
type: EFO_0005072
part of: A-AFFY-2

AT2G29290 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.031278
p value: 2.77214817340075E-4
refers to: AT2G29290
refers to: 266279_at
t statistic: 6.56054675536737

(Assay) Walters_A-10-Kruger-MH1_REP1
type: Assay
has participant: A-AFFY-2

AT1G47400
type: EnsemblDatabaseReference

TBL26 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.204018
p value: 5.15077539569069E-4
refers to: TBL26
refers to: 255604_at
t statistic: -6.05829441564886

GPT2
type: EnsemblDatabaseReference

(Sample) germplasm/Ws-2
type: EFO_0005158
property type: germplasm
property value: Ws-2

250217_at
type: EFO_0005072
part of: A-AFFY-2

245078_at
type: EFO_0005072
part of: A-AFFY-2

259364_at
type: EFO_0005072
part of: A-AFFY-2

ATATG8E
type: EnsemblDatabaseReference

AKINBETA1 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2214162
p value: 6.71331839156802E-9
refers to: AKINBETA1
refers to: 246028_at
t statistic: 24.9187874749347

AT3G62550
type: EnsemblDatabaseReference

GRXC11 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13771366666667
p value: 0.0296774277580461
refers to: 251196_at
refers to: GRXC11
t statistic: 3.08554593008339

MAM-L
type: EnsemblDatabaseReference

249327_at
type: EFO_0005072
part of: A-AFFY-2

CNGC12
type: EnsemblDatabaseReference

DEAR3
type: EnsemblDatabaseReference

CER4 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.09343488333334
p value: 1.60629336408494E-4
refers to: 253309_at
refers to: CER4
t statistic: -7.05472923070048

AT3G13310 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06814793333333
p value: 1.01003490709415E-5
refers to: AT3G13310
refers to: 257654_at
t statistic: -9.83064543246765

RPS2 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09457386666667
p value: 9.0073460516263E-6
refers to: RPS2
refers to: 253997_at
t statistic: 9.97223981292673

(Factor value) GENOTYPE/wild type genotype
type: EFO_0000001
property type: GENOTYPE
property value: wild type genotype

AT3G04210
type: EnsemblDatabaseReference

AT1G56220
type: EnsemblDatabaseReference

265665_at
type: EFO_0005072
part of: A-AFFY-2

(Assay) Walters_A-01-Kruger-WL1_REP1
type: Assay
has participant: A-AFFY-2

261901_at
type: EFO_0005072
part of: A-AFFY-2

253997_at
type: EFO_0005072
part of: A-AFFY-2

263777_at
type: EFO_0005072
part of: A-AFFY-2

257382_at
type: EFO_0005072
part of: A-AFFY-2

AT4G26530
type: EnsemblDatabaseReference

AT1G78020
type: EnsemblDatabaseReference

AT2G24550 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0591897
p value: 1.57331236895094E-6
refers to: AT2G24550
refers to: 263799_at
t statistic: 12.525673192581

260603_at
type: EFO_0005072
part of: A-AFFY-2

GPT2 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.69500948333334
p value: 1.01872323299428E-6
refers to: 264400_at
refers to: GPT2
t statistic: -13.3321594614369

ATCTH UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.39390123333333
p value: 0.00171905763101626
refers to: ATCTH
refers to: 266656_at
t statistic: 5.08999621459846

264246_at
type: EFO_0005072
part of: A-AFFY-2

GRXC11
type: EnsemblDatabaseReference

RAV1
type: EnsemblDatabaseReference

AT3G62550
type: EnsemblDatabaseReference

CNGC12
type: EnsemblDatabaseReference

WRKY54 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.37715776666667
p value: 0.0275137608141143
refers to: WRKY54
refers to: 257382_at
t statistic: 3.13826102209996

AT5G03350
type: EnsemblDatabaseReference

CYP79B2 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13959751666667
p value: 1.32053831114005E-6
refers to: CYP79B2
refers to: 252827_at
t statistic: -12.8825877734409

266070_at
type: EFO_0005072
part of: A-AFFY-2

AT3G04210
type: EnsemblDatabaseReference

AT5G24210 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.28518271666667
p value: 1.72748605120783E-5
refers to: 249777_at
refers to: AT5G24210
t statistic: 9.24980797613162

J8 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.95846886666667
p value: 5.70383325286804E-6
refers to: J8
refers to: 261901_at
t statistic: 10.5837858868863

262355_at
type: EFO_0005072
part of: A-AFFY-2

ATCTH
type: EnsemblDatabaseReference

AT4G26530
type: EnsemblDatabaseReference

AT1G55960 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.29744291666667
p value: 1.65964382170575E-6
refers to: AT1G55960
refers to: 260603_at
t statistic: 12.3600170739514

AT3G06070
type: EnsemblDatabaseReference

AT3G47160
type: EnsemblDatabaseReference

AT1G78020
type: EnsemblDatabaseReference

AT3G15650
type: EnsemblDatabaseReference

WRKY54
type: EnsemblDatabaseReference

ATOFP16
type: EnsemblDatabaseReference

AT1G19960
type: EnsemblDatabaseReference

CCL UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.3178225
p value: 4.02096225796968E-5
refers to: CCL
refers to: 257832_at
t statistic: 8.36294537509346

ACD6
type: EnsemblDatabaseReference

CCL
type: EnsemblDatabaseReference

GRXC11
type: EnsemblDatabaseReference

RAV1
type: EnsemblDatabaseReference

ATEXPA10 DOWN in 'tpt-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01552308333334
p value: 8.41264433475884E-6
refers to: ATEXPA10
refers to: 261266_at
t statistic: -10.0844827176398

PNP-A
type: EnsemblDatabaseReference

AT5G03350 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.43010155
p value: 0.0150213913529155
refers to: AT5G03350
refers to: 250942_at
t statistic: 3.55447998400298

ATOFP16 UP in 'tpt-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21230306666666
p value: 0.0147079992601301
refers to: 265724_at
refers to: ATOFP16
t statistic: 3.5683760976159

256772_at
type: EFO_0005072
part of: A-AFFY-2

ATEXPA10
type: EnsemblDatabaseReference