COX7B UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.26258953514953
p value: 0.00669063356716927
refers to: COX7B
refers to: 8168470
t statistic: 5.76436009862515

8169056
type: EFO_0005072
part of: A-AFFY-141

NDUFB6
type: EnsemblDatabaseReference

DNAJB11
type: EnsemblDatabaseReference

HSPE1P6
type: EnsemblDatabaseReference

SEPW1
type: EnsemblDatabaseReference

SDF2L1 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.23152991744635
p value: 0.00106900574951257
refers to: 8071559
refers to: SDF2L1
t statistic: 10.4401868384561

NDUFAF1
type: EnsemblDatabaseReference

HFM1
type: EnsemblDatabaseReference

8160587
type: EFO_0005072
part of: A-AFFY-141

SLITRK3
type: EnsemblDatabaseReference

SPRED2 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.11890107606457
p value: 0.00252993025067622
refers to: SPRED2
refers to: 8052689
t statistic: 8.03836085342862

TMEM31
type: EnsemblDatabaseReference

ALDH1L2
type: EnsemblDatabaseReference

BAG3
type: EnsemblDatabaseReference

DNAJB4
type: EnsemblDatabaseReference

8118310
type: EFO_0005072
part of: A-AFFY-141

SEPW1 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.40808509138757
p value: 0.00233724769287432
refers to: SEPW1
refers to: 8029969
t statistic: 8.23853426811564

PDIA4
type: EnsemblDatabaseReference

HERPUD1
type: EnsemblDatabaseReference

FAM175A DOWN in '16 micromolar; geneticin' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1348557631313
p value: 0.00167221123552479
refers to: FAM175A
refers to: 8101489
t statistic: -9.06534443968908

HSPH1
type: EnsemblDatabaseReference

8091863
type: EFO_0005072
part of: A-AFFY-141

NUPR1
type: EnsemblDatabaseReference

HSPA5 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.39677497239253
p value: 3.06140583864486E-4
refers to: 8164165
refers to: HSPA5
t statistic: 15.7088289064459

CHORDC1
type: EnsemblDatabaseReference

7893964
type: EFO_0005072
part of: A-AFFY-141

STX1A
type: EnsemblDatabaseReference

7917996
type: EFO_0005072
part of: A-AFFY-141

7940582
type: EFO_0005072
part of: A-AFFY-141

E-GEOD-57198
type: microarray 1colour mrna differential
RO_0002162: Homo sapiens
description: In order to study the cellular response to aminoglycoside-induced mistranslation, we used a whole-genome microarray analysis of geneticin-treated versus untreated cells, which revealed a broad transcriptional response totaling 705 genes. comparison of four geneticin treated biological replicates with four untreated biological replicates (selected for a fold change > 1.2, Benjamini-Hochberg corrected p-value < 0.05)

(Assay) GSM1377008
type: Assay
has participant: A-AFFY-141

8164165
type: EFO_0005072
part of: A-AFFY-141

COX7B
type: EnsemblDatabaseReference

DDIT4 DOWN in '16 micromolar; geneticin' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02276621971969
p value: 0.0102358986776153
refers to: DDIT4
refers to: 7928308
t statistic: -5.11688903956149

SART3
type: EnsemblDatabaseReference

8034837
type: EFO_0005072
part of: A-AFFY-141

DNAJC3
type: EnsemblDatabaseReference

DNAJB11
type: EnsemblDatabaseReference

ARNTL
type: EnsemblDatabaseReference

OVGP1
type: EnsemblDatabaseReference

BAG3 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1618272585712
p value: 3.06140583864486E-4
refers to: 7930921
refers to: BAG3
t statistic: 17.2889844168807

BEST1 DOWN in '16 micromolar; geneticin' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08107615172728
p value: 0.00257809480118051
refers to: BEST1
refers to: 7940582
t statistic: -7.95942608205638

HFM1
type: EnsemblDatabaseReference

ATF7IP2 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02830416564422
p value: 0.00252993025067622
refers to: ATF7IP2
refers to: 7993167
t statistic: 8.0565708355824

DNAJB11 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15959545709683
p value: 6.72462623508572E-4
refers to: 8084634
refers to: DNAJB11
t statistic: 12.3851729064104

ALDH1L2 DOWN in '16 micromolar; geneticin' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06474594458229
p value: 0.0131904592526074
refers to: ALDH1L2
refers to: 7965979
t statistic: -4.77712713100924

BEST1
type: EnsemblDatabaseReference

SLC6A9
type: EnsemblDatabaseReference

7923582
type: EFO_0005072
part of: A-AFFY-141

8179848
type: EFO_0005072
part of: A-AFFY-141

7967304
type: EFO_0005072
part of: A-AFFY-141

(Assay) GSM1377012
type: Assay
has participant: A-AFFY-141

DNAJC3 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.07216205203222
p value: 0.00106900574951257
refers to: 7969651
refers to: DNAJC3
t statistic: 10.5205162053775

8084634
type: EFO_0005072
part of: A-AFFY-141

ATF7IP2
type: EnsemblDatabaseReference

SPRED2
type: EnsemblDatabaseReference

7928308
type: EFO_0005072
part of: A-AFFY-141

HSPA1A UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 2.3930411831731
p value: 3.06140583864486E-4
refers to: 8118314
refers to: HSPA1A
t statistic: 14.9087653211357

HSPA1L UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 2.067542810019
p value: 0.00106900574951257
refers to: HSPA1L
refers to: 8125134
t statistic: 10.328875288504

RSRC2
type: EnsemblDatabaseReference

SEPW1
type: EnsemblDatabaseReference

7970864
type: EFO_0005072
part of: A-AFFY-141

DNAJB4 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03995102884494
p value: 3.06140583864486E-4
refers to: DNAJB4
refers to: 7902512
t statistic: 15.0844125188903

NDUFAF1
type: EnsemblDatabaseReference

(Factor value) COMPOUND/geneticin 16
type: EFO_0000001
property type: COMPOUND
property value: geneticin 16

7994362
type: EFO_0005072
part of: A-AFFY-141

A-AFFY-141
type: EFO_0000269

FAM175A
type: EnsemblDatabaseReference

HSPA1A
type: EnsemblDatabaseReference

TMEM31
type: EnsemblDatabaseReference

COX7B
type: EnsemblDatabaseReference

DNAJB1
type: EnsemblDatabaseReference

CCDC101
type: EnsemblDatabaseReference

SART3
type: EnsemblDatabaseReference

8035465
type: EFO_0005072
part of: A-AFFY-141

DNAJC3
type: EnsemblDatabaseReference

ARNTL
type: EnsemblDatabaseReference

7938563
type: EFO_0005072
part of: A-AFFY-141

8101489
type: EFO_0005072
part of: A-AFFY-141

SERPINF1
type: EnsemblDatabaseReference

(Sample) organism/Homo sapiens
type: Homo sapiens
property type: organism
property value: Homo sapiens

DDIT4
type: EnsemblDatabaseReference

CANX UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.30686006601392
p value: 0.0460448135753086
refers to: CANX
refers to: 7893964
t statistic: 3.33524636803809

Homo sapiens
type: OBI_0100026

SLC6A9
type: EnsemblDatabaseReference

ARNTL UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03191882585482
p value: 0.00252993025067622
refers to: ARNTL
refers to: 7938563
t statistic: 8.06004983261084

8140113
type: EFO_0005072
part of: A-AFFY-141

7917634
type: EFO_0005072
part of: A-AFFY-141

STX1A UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.25340985912267
p value: 0.00106900574951257
refers to: STX1A
refers to: 8140113
t statistic: 10.5831628937061

(Assay) GSM1377009
type: Assay
has participant: A-AFFY-141

(Assay) GSM1377010
type: Assay
has participant: A-AFFY-141

SPRED2
type: EnsemblDatabaseReference

7969651
type: EFO_0005072
part of: A-AFFY-141

RSRC2
type: EnsemblDatabaseReference

HSPA5
type: EnsemblDatabaseReference

HSPA1L UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 2.067542810019
p value: 0.00106900574951257
refers to: HSPA1L
refers to: 8179848
t statistic: 10.328875288504

LRRC39
type: EnsemblDatabaseReference

SDF2L1
type: EnsemblDatabaseReference

DNAJB1 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.67948359215159
p value: 3.06140583864486E-4
refers to: 8034837
refers to: DNAJB1
t statistic: 15.2242672509695

8143684
type: EFO_0005072
part of: A-AFFY-141

7915543
type: EFO_0005072
part of: A-AFFY-141

HSPE1P6 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.23446764009402
p value: 0.00418138309627218
refers to: 7923582
refers to: HSPE1P6
t statistic: 6.75041161609018

CANX
type: EnsemblDatabaseReference

8118314
type: EFO_0005072
part of: A-AFFY-141

7993167
type: EFO_0005072
part of: A-AFFY-141

HSPA1A
type: EnsemblDatabaseReference

DNAJB1
type: EnsemblDatabaseReference

SART3 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09109732524148
p value: 0.0113558189128654
refers to: SART3
refers to: 7896343
t statistic: 4.96286688643091

8000574
type: EFO_0005072
part of: A-AFFY-141

CCDC101
type: EnsemblDatabaseReference

NDUFAF1 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.05271149543275
p value: 0.00103713644830493
refers to: 7987642
refers to: NDUFAF1
t statistic: 11.2481506475609

OVGP1 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.26826131801635
p value: 0.00442425672095723
refers to: OVGP1
refers to: 7918504
t statistic: 6.60645986652911

ATF7IP2
type: EnsemblDatabaseReference

7987642
type: EFO_0005072
part of: A-AFFY-141

7965979
type: EFO_0005072
part of: A-AFFY-141

NDUFB6
type: EnsemblDatabaseReference

SERPINF1
type: EnsemblDatabaseReference

(Assay) GSM1377006
type: Assay
has participant: A-AFFY-141

7902512
type: EFO_0005072
part of: A-AFFY-141

(Assay) GSM1377005
type: Assay
has participant: A-AFFY-141

ISYNA1
type: EnsemblDatabaseReference

DDIT4
type: EnsemblDatabaseReference

HFM1 DOWN in '16 micromolar; geneticin' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10288357364461
p value: 0.00812602475752555
refers to: HFM1
refers to: 7917634
t statistic: -5.45101175876947

PDIA4 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.34431811497495
p value: 0.00111184135828115
refers to: PDIA4
refers to: 8143684
t statistic: 10.0929055951836

8071559
type: EFO_0005072
part of: A-AFFY-141

NUPR1 DOWN in '16 micromolar; geneticin' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.53259732590036
p value: 0.00597178200571155
refers to: NUPR1
refers to: 8000574
t statistic: -5.98974036119556

7918504
type: EFO_0005072
part of: A-AFFY-141

(Factor value) COMPOUND/none
type: EFO_0001461
property type: COMPOUND
property value: none

SLITRK3
type: EnsemblDatabaseReference

7995895
type: EFO_0005072
part of: A-AFFY-141

HSPA1A UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.9555169650163
p value: 3.06140583864486E-4
refers to: 8118310
refers to: HSPA1A
t statistic: 17.7964585460645

7892962
type: EFO_0005072
part of: A-AFFY-141

FAM175A
type: EnsemblDatabaseReference

NDUFB6 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21915655317498
p value: 0.00366144007689341
refers to: NDUFB6
refers to: 8160587
t statistic: 7.08543784004771

ALDH1L2
type: EnsemblDatabaseReference

BAG3
type: EnsemblDatabaseReference

TMEM31 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.20973938621937
p value: 0.00183688320474962
refers to: TMEM31
refers to: 8169056
t statistic: 8.74120431270452

7950983
type: EFO_0005072
part of: A-AFFY-141

8168470
type: EFO_0005072
part of: A-AFFY-141

HSPH1
type: EnsemblDatabaseReference

HSPA1L
type: EnsemblDatabaseReference

ISYNA1 DOWN in '16 micromolar; geneticin' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12039214551416
p value: 0.00443796705259145
refers to: ISYNA1
refers to: 8035465
t statistic: -6.59771552934906

SDF2L1
type: EnsemblDatabaseReference

HSPE1P6
type: EnsemblDatabaseReference

SLITRK3 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01371966642438
p value: 0.00483853627063546
refers to: SLITRK3
refers to: 8091863
t statistic: 6.39888528326485

(Sample) cell type/HEK
type: EFO_0000001
property type: cell type
property value: HEK

CANX UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.43779402361758
p value: 0.00729049555754085
refers to: 7892962
refers to: CANX
t statistic: 5.61045473399946

CANX
type: EnsemblDatabaseReference

STX1A
type: EnsemblDatabaseReference

(Sample) genotype/wild type genotype
type: EFO_0000001
property type: genotype
property value: wild type genotype

CHORDC1 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.41684299946198
p value: 0.0132868661620495
refers to: CHORDC1
refers to: 7950983
t statistic: 4.76320374876749

DNAJB4
type: EnsemblDatabaseReference

Analysis of '16 micromolar; geneticin' vs 'none'
type: MicroarrayDifferentialExpressionAnalysis

PDIA4
type: EnsemblDatabaseReference

7930921
type: EFO_0005072
part of: A-AFFY-141

HERPUD1
type: EnsemblDatabaseReference

HSPA5
type: EnsemblDatabaseReference

LRRC39
type: EnsemblDatabaseReference

ISYNA1
type: EnsemblDatabaseReference

OVGP1
type: EnsemblDatabaseReference

8125134
type: EFO_0005072
part of: A-AFFY-141

NUPR1
type: EnsemblDatabaseReference

SLC6A9 DOWN in '16 micromolar; geneticin' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.36103410021639
p value: 0.00167221123552479
refers to: SLC6A9
refers to: 7915543
t statistic: -9.02436796605647

(Assay) GSM1377007
type: Assay
has participant: A-AFFY-141

LRRC39 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.089821785499
p value: 0.00380825251530095
refers to: 7917996
refers to: LRRC39
t statistic: 6.98511174135531

BEST1
type: EnsemblDatabaseReference

CHORDC1
type: EnsemblDatabaseReference

RSRC2 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06556789285669
p value: 6.23293570447544E-4
refers to: RSRC2
refers to: 7967304
t statistic: 13.5303193481324

HERPUD1 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04044245466482
p value: 0.00287715223808203
refers to: HERPUD1
refers to: 7995895
t statistic: 7.6261191194594

CCDC101 DOWN in '16 micromolar; geneticin' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00953939323121
p value: 6.58244415151229E-4
refers to: 7994362
refers to: CCDC101
t statistic: -12.6617661658977

8003667
type: EFO_0005072
part of: A-AFFY-141

(Assay) GSM1377011
type: Assay
has participant: A-AFFY-141

8052689
type: EFO_0005072
part of: A-AFFY-141

SERPINF1 DOWN in '16 micromolar; geneticin' vs 'none'
type: DecreasedDifferentialExpressionRatio
fold change: -1.184467254879
p value: 0.0471709931231241
refers to: 8003667
refers to: SERPINF1
t statistic: -3.3141597952394

HSPH1 UP in '16 micromolar; geneticin' vs 'none'
type: IncreasedDifferentialExpressionRatio
fold change: 1.43014247979608
p value: 4.10415206885808E-5
refers to: HSPH1
refers to: 7970864
t statistic: 25.1576568600571

8029969
type: EFO_0005072
part of: A-AFFY-141

7896343
type: EFO_0005072
part of: A-AFFY-141

HSPA1L
type: EnsemblDatabaseReference