Sdc2
type: EnsemblDatabaseReference

C1qa
type: EnsemblDatabaseReference

Il1rn
type: EnsemblDatabaseReference

Mptx1
type: EnsemblDatabaseReference

H2-T3
type: EnsemblDatabaseReference

10460696
type: EFO_0005072
part of: A-AFFY-130

Snrpn
type: EnsemblDatabaseReference

Rgs16 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.43080888259622
p value: 0.0245857391013394
refers to: Rgs16
refers to: 10350733
t statistic: -5.68580034078061

Cyp2c68
type: EnsemblDatabaseReference

Cdc42ep2
type: EnsemblDatabaseReference

10574780
type: EFO_0005072
part of: A-AFFY-130

10516484
type: EFO_0005072
part of: A-AFFY-130

Ero1l
type: EnsemblDatabaseReference

Gm10561
type: EnsemblDatabaseReference

Insl5 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 3.03966451508656
p value: 0.00525825938488454
refers to: Insl5
refers to: 10514708
t statistic: 10.5898067082202

Mucl1 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.9642806394232
p value: 0.00259153586900755
refers to: 10433179
refers to: Mucl1
t statistic: 13.0307984533468

Ces1d
type: EnsemblDatabaseReference

(Sample) cell type/intestinal epithelial cell
type: EFO_0000001
property type: cell type
property value: intestinal epithelial cell

Akr1b8
type: EnsemblDatabaseReference

Fam57a
type: EnsemblDatabaseReference

Ppy
type: EnsemblDatabaseReference

(Sample) organism/Mus musculus
type: Mus musculus
property type: organism
property value: Mus musculus

Retnlb DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1169570620651
p value: 0.0250271464747074
refers to: 10436087
refers to: Retnlb
t statistic: -5.60114352763511

Ppy UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 3.05657889140214
p value: 0.00164824902168652
refers to: Ppy
refers to: 10391555
t statistic: 14.1846907617632

Sst
type: EnsemblDatabaseReference

10491056
type: EFO_0005072
part of: A-AFFY-130

Snrpn UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.58886426817765
p value: 0.022115137478432
refers to: Snrpn
refers to: 10564211
t statistic: 5.93569072608883

Gchfr
type: EnsemblDatabaseReference

Slc25a45
type: EnsemblDatabaseReference

Wee1 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04868950405713
p value: 0.0304675025357204
refers to: 10556266
refers to: Wee1
t statistic: -5.21957487387917

Pyy UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.23660665826729
p value: 0.0185102781094636
refers to: 10391561
refers to: Pyy
t statistic: 6.40222766413034

Fxyd3 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1060560616311
p value: 0.00711413247033194
refers to: Fxyd3
refers to: 10562223
t statistic: -9.63444650243632

Pdia5
type: EnsemblDatabaseReference

1700016C15Rik
type: EnsemblDatabaseReference

Eno3
type: EnsemblDatabaseReference

A4gnt
type: EnsemblDatabaseReference

10423556
type: EFO_0005072
part of: A-AFFY-130

Tmem176b
type: EnsemblDatabaseReference

Calcb DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -2.11459590169684
p value: 0.0348053910638975
refers to: Calcb
refers to: 10556546
t statistic: -4.9832202528296

Myof DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10149522691653
p value: 0.02184371907482
refers to: Myof
refers to: 10467258
t statistic: -6.054364317129

Gm14137
type: EnsemblDatabaseReference

Mal
type: EnsemblDatabaseReference

10487441
type: EFO_0005072
part of: A-AFFY-130

10490755
type: EFO_0005072
part of: A-AFFY-130

10454192
type: EFO_0005072
part of: A-AFFY-130

BC021614
type: EnsemblDatabaseReference

Plcb1
type: EnsemblDatabaseReference

10564211
type: EFO_0005072
part of: A-AFFY-130

Ccl9
type: EnsemblDatabaseReference

Lpcat4
type: EnsemblDatabaseReference

10406176
type: EFO_0005072
part of: A-AFFY-130

10419198
type: EFO_0005072
part of: A-AFFY-130

10502375
type: EFO_0005072
part of: A-AFFY-130

Slc10a2
type: EnsemblDatabaseReference

Dlg1 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22231167928835
p value: 0.0457190265360017
refers to: Dlg1
refers to: 10340390
t statistic: -4.4573333341733

Prap1
type: EnsemblDatabaseReference

10556266
type: EFO_0005072
part of: A-AFFY-130

Rbp7
type: EnsemblDatabaseReference

Lpo
type: EnsemblDatabaseReference

10362138
type: EFO_0005072
part of: A-AFFY-130

10428814
type: EFO_0005072
part of: A-AFFY-130

10474919
type: EFO_0005072
part of: A-AFFY-130

Rhoq
type: EnsemblDatabaseReference

10346321
type: EFO_0005072
part of: A-AFFY-130

Anapc1 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15577153621328
p value: 0.0230820474225634
refers to: 10344347
refers to: Anapc1
t statistic: -5.84862421738253

Ttr
type: EnsemblDatabaseReference

Thbs1 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.56574450244218
p value: 0.0173382481067175
refers to: Thbs1
refers to: 10474700
t statistic: -6.65332430459183

Insl5
type: EnsemblDatabaseReference

Timp3 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.92810677730801
p value: 0.0130500551513849
refers to: 10365482
refers to: Timp3
t statistic: -7.65525320609596

Rhoq DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16434056809903
p value: 0.0160550063214888
refers to: 10447341
refers to: Rhoq
t statistic: -6.9724588158517

Phlda1
type: EnsemblDatabaseReference

Apoc2
type: EnsemblDatabaseReference

Pyy
type: EnsemblDatabaseReference

Ddah1
type: EnsemblDatabaseReference

Plet1 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.41381496396599
p value: 0.0204403168846241
refers to: 10585186
refers to: Plet1
t statistic: 6.22702729861362

10475625
type: EFO_0005072
part of: A-AFFY-130

10522530
type: EFO_0005072
part of: A-AFFY-130

Bend7 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.25157813809665
p value: 0.00525825938488454
refers to: Bend7
refers to: 10469020
t statistic: -10.7053141850639

10350733
type: EFO_0005072
part of: A-AFFY-130

Kit
type: EnsemblDatabaseReference

Gjb3 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.24670059927197
p value: 0.0173382481067175
refers to: Gjb3
refers to: 10516484
t statistic: -6.75407606258166

Ano1 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11161363420936
p value: 0.0250271464747074
refers to: 10569618
refers to: Ano1
t statistic: -5.63442180310901

Coq5
type: EnsemblDatabaseReference

10467258
type: EFO_0005072
part of: A-AFFY-130

10539894
type: EFO_0005072
part of: A-AFFY-130

Lpo UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.21912109861225
p value: 0.00711413247033194
refers to: Lpo
refers to: 10389639
t statistic: 9.72214710360716

10429140
type: EFO_0005072
part of: A-AFFY-130

Cxcl13 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.38828059601211
p value: 0.0122559361065536
refers to: 10523359
refers to: Cxcl13
t statistic: -7.79832543768262

Sult1c2
type: EnsemblDatabaseReference

10539080
type: EFO_0005072
part of: A-AFFY-130

Thbs1
type: EnsemblDatabaseReference

Sult1a1
type: EnsemblDatabaseReference

2210407C18Rik
type: EnsemblDatabaseReference

Vsig2
type: EnsemblDatabaseReference

Srd5a2
type: EnsemblDatabaseReference

10394990
type: EFO_0005072
part of: A-AFFY-130

10467385
type: EFO_0005072
part of: A-AFFY-130

10452854
type: EFO_0005072
part of: A-AFFY-130

Akr1b8
type: EnsemblDatabaseReference

Myof
type: EnsemblDatabaseReference

Gdf15
type: EnsemblDatabaseReference

10492300
type: EFO_0005072
part of: A-AFFY-130

Kit DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22855339989449
p value: 0.02184371907482
refers to: Kit
refers to: 10522530
t statistic: -6.02212959924555

Mier3
type: EnsemblDatabaseReference

10345762
type: EFO_0005072
part of: A-AFFY-130

Cbr3
type: EnsemblDatabaseReference

10451818
type: EFO_0005072
part of: A-AFFY-130

Pbp2
type: EnsemblDatabaseReference

Gml
type: EnsemblDatabaseReference

Gchfr UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4543049584442
p value: 0.0122206640492226
refers to: 10474915
refers to: Gchfr
t statistic: 7.95499529903352

10379636
type: EFO_0005072
part of: A-AFFY-130

Mucl1
type: EnsemblDatabaseReference

Sycn DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5785509003501
p value: 0.0302122189222186
refers to: Sycn
refers to: 10551531
t statistic: -5.23420011498507

Gml UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.37319568070754
p value: 0.00525825938488454
refers to: 10429534
refers to: Gml
t statistic: 10.6850672800086

Fgfr2
type: EnsemblDatabaseReference

1700016C15Rik
type: EnsemblDatabaseReference

A4gnt DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.65322597797
p value: 0.0495744851755352
refers to: A4gnt
refers to: 10588132
t statistic: -4.31361315412682

Slc37a2
type: EnsemblDatabaseReference

Mttp
type: EnsemblDatabaseReference

Gch1
type: EnsemblDatabaseReference

10544644
type: EFO_0005072
part of: A-AFFY-130

Ckb
type: EnsemblDatabaseReference

10548779
type: EFO_0005072
part of: A-AFFY-130

Gsdmc2
type: EnsemblDatabaseReference

Ccl9 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00656553362026
p value: 0.0131877413396149
refers to: 10389214
refers to: Ccl9
t statistic: -7.60251888858934

Rgs16
type: EnsemblDatabaseReference

E-GEOD-50189
type: microarray 1colour mrna differential
RO_0002162: Mus musculus
description: The development and severity of inflammatory bowel diseases (IBD) and other chronic inflammatory conditions can be influenced by host genetic and environmental factors, including signals derived from commensal bacteria. However, the mechanisms that integrate these diverse cues remain undefined. Here we demonstrate that intestinal epithelial cells (IECs) isolated from IBD patients exhibit decreased expression of the epigenome-modifying enzyme histone deacetylase 3 (HDAC3). Further, genome-wide analyses of murine IECs that lack HDAC3 (HDAC3ÃÂIEC) revealed that HDAC3 deficiency resulted in dysregulated gene expression coupled with alterations in histone acetylation. Critically, conventionally-housed HDAC3ÃÂIEC mice demonstrated loss of Paneth cells, impaired IEC function and alterations in the composition of intestinal commensal bacteria. In addition, HDAC3ÃÂIEC mice exhibited significantly increased susceptibility to intestinal damage and inflammation, indicating that epithelial expression of HDAC3 plays a central role in maintaining intestinal homeostasis. Strikingly, rederivation of HDAC3ÃÂIEC mice into germ-free conditions revealed that dysregulated IEC gene expression, Paneth cell homeostasis, and intestinal barrier function were largely restored in the absence of commensal bacteria. Collectively, these data indicate that the HDAC3 is a critical factor that integrates commensal bacteria-derived signals to calibrate epithelial cell responses required to establish normal host-commensal relationships and maintain intestinal homeostasis. In this study, we performed gene expression profiling to examine how the transcriptional profiles in primary live, EpCAM+ IECs from the large intestine differed between germ-free control HDAC3FF mice (3 biological replicates) and germ-free IEC-intrinsic knockout HDAC3ÃÂIEC mice (3 biological replicates).
uses data from: http://identifiers.org/pubmed/24185009

BC021614
type: EnsemblDatabaseReference

Capg UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.43103664698866
p value: 0.0204403168846241
refers to: Capg
refers to: 10539135
t statistic: 6.22605883643869

Aadac
type: EnsemblDatabaseReference

Mus musculus
type: OBI_0100026

Tmem176b DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06142558473829
p value: 0.0334415312719729
refers to: Tmem176b
refers to: 10544596
t statistic: -5.06955306104697

Prap1 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.63261763065892
p value: 0.0151519292036135
refers to: Prap1
refers to: 10558590
t statistic: 7.2701111903574

10523175
type: EFO_0005072
part of: A-AFFY-130

Creb3l3
type: EnsemblDatabaseReference

Ttr DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.75106236503517
p value: 0.0250271464747074
refers to: 10454192
refers to: Ttr
t statistic: -5.61898626578504

S100a14
type: EnsemblDatabaseReference

Rbp7
type: EnsemblDatabaseReference

Apol10a
type: EnsemblDatabaseReference

Zfp239 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.08196122501981
p value: 0.00823866785244629
refers to: Zfp239
refers to: 10541098
t statistic: 8.8843165073108

Ces1g DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.97309766026045
p value: 0.0270321926113934
refers to: Ces1g
refers to: 10580678
t statistic: -5.41498965879624

Muc4
type: EnsemblDatabaseReference

10426891
type: EFO_0005072
part of: A-AFFY-130

10507273
type: EFO_0005072
part of: A-AFFY-130

Mttp UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.56803242599431
p value: 0.0354123240908836
refers to: 10502375
refers to: Mttp
t statistic: 4.96291002293045

Gramd1b DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.49872480224926
p value: 0.0245857391013394
refers to: 10592471
refers to: Gramd1b
t statistic: -5.70366821818097

Wfdc18 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 4.48778073306684
p value: 3.60791203198883E-4
refers to: Wfdc18
refers to: 10379731
t statistic: 26.0336195484687

10434758
type: EFO_0005072
part of: A-AFFY-130

Mboat2
type: EnsemblDatabaseReference

Cmtm8 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.28069584665498
p value: 0.0245857391013394
refers to: Cmtm8
refers to: 10597470
t statistic: -5.67814976480996

Ddah1
type: EnsemblDatabaseReference

10587810
type: EFO_0005072
part of: A-AFFY-130

Cyp4f16
type: EnsemblDatabaseReference

Slc9a3
type: EnsemblDatabaseReference

(Factor value) GENOTYPE/floxed HDAC3 (wild type)
type: EFO_0000001
property type: GENOTYPE
property value: floxed HDAC3 (wild type)

Lgals2
type: EnsemblDatabaseReference

Gm10680
type: EnsemblDatabaseReference

A-AFFY-130
type: EFO_0000269

10464328
type: EFO_0005072
part of: A-AFFY-130

Coq5
type: EnsemblDatabaseReference

10549594
type: EFO_0005072
part of: A-AFFY-130

Srd5a2 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06044110605852
p value: 0.0482319893272822
refers to: 10452854
refers to: Srd5a2
t statistic: -4.35195682962364

4931406C07Rik UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14930459740284
p value: 0.00711413247033194
refers to: 4931406C07Rik
refers to: 10591022
t statistic: 9.7958304326046

Ano1
type: EnsemblDatabaseReference

Bend7
type: EnsemblDatabaseReference

Aadac DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -2.10039129939548
p value: 0.0315910327182566
refers to: 10492300
refers to: Aadac
t statistic: -5.16427854055328

10498710
type: EFO_0005072
part of: A-AFFY-130

Pnliprp2
type: EnsemblDatabaseReference

Cytip
type: EnsemblDatabaseReference

10424979
type: EFO_0005072
part of: A-AFFY-130

Tbl1xr1 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02059332387359
p value: 0.0395068895163618
refers to: Tbl1xr1
refers to: 10491056
t statistic: 4.75566935122964

Sycn
type: EnsemblDatabaseReference

1700057G04Rik UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.91414800855073
p value: 0.0343714464075681
refers to: 10587810
refers to: 1700057G04Rik
t statistic: 4.99903535700329

10544596
type: EFO_0005072
part of: A-AFFY-130

Ereg
type: EnsemblDatabaseReference

Gpt
type: EnsemblDatabaseReference

Gpt UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.3602676947096
p value: 0.0122206640492226
refers to: 10424979
refers to: Gpt
t statistic: 7.89323661312986

10447341
type: EFO_0005072
part of: A-AFFY-130

Mgll
type: EnsemblDatabaseReference

10517517
type: EFO_0005072
part of: A-AFFY-130

Sema7a
type: EnsemblDatabaseReference

Sema7a UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.23299655023614
p value: 0.0325312815843272
refers to: Sema7a
refers to: 10585778
t statistic: 5.12503170264613

Gramd1b
type: EnsemblDatabaseReference

Analysis of 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: MicroarrayDifferentialExpressionAnalysis

10539135
type: EFO_0005072
part of: A-AFFY-130

Slc25a45 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.67563956909643
p value: 8.7316454590324E-4
refers to: 10460696
refers to: Slc25a45
t statistic: 16.7658812437257

Phlda1 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.26021042558197
p value: 0.0112920592769802
refers to: 10366346
refers to: Phlda1
t statistic: 8.24002773142187

10523182
type: EFO_0005072
part of: A-AFFY-130

Mttp
type: EnsemblDatabaseReference

Gsdmc2
type: EnsemblDatabaseReference

Itch
type: EnsemblDatabaseReference

(Assay) GSM1215250
type: Assay
has participant: A-AFFY-130

Mettl7a1 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21934746621516
p value: 0.0215902785729791
refers to: 10426891
refers to: Mettl7a1
t statistic: -6.08315936464307

10389639
type: EFO_0005072
part of: A-AFFY-130

10464594
type: EFO_0005072
part of: A-AFFY-130

10585186
type: EFO_0005072
part of: A-AFFY-130

10558590
type: EFO_0005072
part of: A-AFFY-130

Slc10a2 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.62244259597965
p value: 0.0370870186552439
refers to: Slc10a2
refers to: 10576901
t statistic: -4.87852676876862

Dusp6
type: EnsemblDatabaseReference

Ephx2
type: EnsemblDatabaseReference

Gm21847
type: EnsemblDatabaseReference

Akr1c14
type: EnsemblDatabaseReference

10541098
type: EFO_0005072
part of: A-AFFY-130

Aadac
type: EnsemblDatabaseReference

Me1
type: EnsemblDatabaseReference

4931406C07Rik
type: EnsemblDatabaseReference

10569972
type: EFO_0005072
part of: A-AFFY-130

Il1r1
type: EnsemblDatabaseReference

S100a14
type: EnsemblDatabaseReference

Cpq DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17863918849628
p value: 0.0155711149559921
refers to: Cpq
refers to: 10423556
t statistic: -7.10004095656943

Dlg1
type: EnsemblDatabaseReference

(Assay) GSM1215251
type: Assay
has participant: A-AFFY-130

10595145
type: EFO_0005072
part of: A-AFFY-130

10436978
type: EFO_0005072
part of: A-AFFY-130

Ubd
type: EnsemblDatabaseReference

Eid1
type: EnsemblDatabaseReference

Epha2
type: EnsemblDatabaseReference

Slc9a3 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.78882964542767
p value: 8.63276600491835E-4
refers to: Slc9a3
refers to: 10406176
t statistic: 18.3503072531051

Gm14137 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.46352373518459
p value: 0.0250271464747074
refers to: 10474919
refers to: Gm14137
t statistic: 5.60204688889247

Gjb5 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.41811942292745
p value: 0.0281862072442217
refers to: Gjb5
refers to: 10516490
t statistic: -5.33380159787515

Plet1
type: EnsemblDatabaseReference

10474915
type: EFO_0005072
part of: A-AFFY-130

Gbe1
type: EnsemblDatabaseReference

Cers4
type: EnsemblDatabaseReference

Ttyh1
type: EnsemblDatabaseReference

St3gal4
type: EnsemblDatabaseReference

Lgals2 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.26424870270056
p value: 0.00525825938488454
refers to: Lgals2
refers to: 10430425
t statistic: 10.4290488098558

Gdf15 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.60275669181966
p value: 0.00718701923493242
refers to: Gdf15
refers to: 10579331
t statistic: 9.20548530122907

10340709
type: EFO_0005072
part of: A-AFFY-130

Mptx1
type: EnsemblDatabaseReference

Me1 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.11865936311882
p value: 0.0122206640492226
refers to: 10405753
refers to: Me1
t statistic: 7.863005539266

Sdc2
type: EnsemblDatabaseReference

C1qa
type: EnsemblDatabaseReference

Gjb3
type: EnsemblDatabaseReference

Hpgd
type: EnsemblDatabaseReference

10518674
type: EFO_0005072
part of: A-AFFY-130

Bche
type: EnsemblDatabaseReference

Anxa13 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.76787220367591
p value: 0.0160962141270763
refers to: Anxa13
refers to: 10428814
t statistic: -6.90566241643235

Hnf4g
type: EnsemblDatabaseReference

H2-T3
type: EnsemblDatabaseReference

Cbr3 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.05807937766061
p value: 0.023859590430657
refers to: 10436978
refers to: Cbr3
t statistic: 5.77385845620044

10420935
type: EFO_0005072
part of: A-AFFY-130

Cdc42ep2
type: EnsemblDatabaseReference

Mettl7a1
type: EnsemblDatabaseReference

Gm10561
type: EnsemblDatabaseReference

Lgals2
type: EnsemblDatabaseReference

10340390
type: EFO_0005072
part of: A-AFFY-130

Pdk4 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.0260342926437
p value: 0.0173382481067175
refers to: 10543017
refers to: Pdk4
t statistic: 6.71905674768522

10533612
type: EFO_0005072
part of: A-AFFY-130

(Assay) GSM1215254
type: Assay
has participant: A-AFFY-130

10485597
type: EFO_0005072
part of: A-AFFY-130

Coq5 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.19300706132446
p value: 0.0173382481067175
refers to: Coq5
refers to: 10524668
t statistic: 6.68071495118159

Itch DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.55915469071198
p value: 0.0326767382199506
refers to: Itch
refers to: 10343467
t statistic: -5.11335134771338

Iapp UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.34675884794066
p value: 0.047193647037234
refers to: Iapp
refers to: 10542632
t statistic: 4.40753493270449

Slc25a45
type: EnsemblDatabaseReference

St3gal5 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.47926958648066
p value: 0.0173382481067175
refers to: 10539080
refers to: St3gal5
t statistic: -6.64272053874943

10469020
type: EFO_0005072
part of: A-AFFY-130

Hnf4g DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4758839580344
p value: 0.0154163713242883
refers to: Hnf4g
refers to: 10490755
t statistic: -7.20321985408551

Anxa13
type: EnsemblDatabaseReference

Calcb
type: EnsemblDatabaseReference

Timp3
type: EnsemblDatabaseReference

Gm14137
type: EnsemblDatabaseReference

Mal
type: EnsemblDatabaseReference

Ereg
type: EnsemblDatabaseReference

Gm6086
type: EnsemblDatabaseReference

Fgfr2 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.67238637356481
p value: 0.0155711149559921
refers to: Fgfr2
refers to: 10568436
t statistic: -7.12483358196965

Lpcat4 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.32570141280768
p value: 0.00164824902168652
refers to: Lpcat4
refers to: 10474526
t statistic: 14.3045789790761

Sptssb UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.37498410681918
p value: 0.0250271464747074
refers to: 10498653
refers to: Sptssb
t statistic: 5.61935364846134

Ccl9
type: EnsemblDatabaseReference

Retnlb
type: EnsemblDatabaseReference

Lpcat4
type: EnsemblDatabaseReference

10352097
type: EFO_0005072
part of: A-AFFY-130

10469816
type: EFO_0005072
part of: A-AFFY-130

Scd1
type: EnsemblDatabaseReference

10562223
type: EFO_0005072
part of: A-AFFY-130

Tbl1xr1
type: EnsemblDatabaseReference

Slfn4
type: EnsemblDatabaseReference

Itch
type: EnsemblDatabaseReference

Lpo
type: EnsemblDatabaseReference

Il1rn UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.22177427833255
p value: 0.0408623190829231
refers to: Il1rn
refers to: 10469816
t statistic: 4.64112453950268

Hsd11b2
type: EnsemblDatabaseReference

10556546
type: EFO_0005072
part of: A-AFFY-130

Rhoq
type: EnsemblDatabaseReference

10571840
type: EFO_0005072
part of: A-AFFY-130

Wee1
type: EnsemblDatabaseReference

10365482
type: EFO_0005072
part of: A-AFFY-130

Hpd DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13854857231521
p value: 0.00992098480263407
refers to: 10533612
refers to: Hpd
t statistic: -8.55765311893803

Ttr
type: EnsemblDatabaseReference

10543017
type: EFO_0005072
part of: A-AFFY-130

10433179
type: EFO_0005072
part of: A-AFFY-130

10585778
type: EFO_0005072
part of: A-AFFY-130

Insl5
type: EnsemblDatabaseReference

Ndrg1
type: EnsemblDatabaseReference

Areg
type: EnsemblDatabaseReference

Phlda1
type: EnsemblDatabaseReference

1700016C15Rik UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.34777988211803
p value: 0.0395068895163618
refers to: 1700016C15Rik
refers to: 10352097
t statistic: 4.75599478507974

10584325
type: EFO_0005072
part of: A-AFFY-130

St6gal1
type: EnsemblDatabaseReference

10428955
type: EFO_0005072
part of: A-AFFY-130

Gm8074
type: EnsemblDatabaseReference

Gbe1 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02540325859595
p value: 0.0270321926113934
refers to: Gbe1
refers to: 10436500
t statistic: -5.43249277817617

Kit
type: EnsemblDatabaseReference

Gjb3
type: EnsemblDatabaseReference

10429534
type: EFO_0005072
part of: A-AFFY-130

Ddah1 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.24393403824256
p value: 0.00823866785244629
refers to: 10496727
refers to: Ddah1
t statistic: 8.88697562459945

Bche
type: EnsemblDatabaseReference

Iapp
type: EnsemblDatabaseReference

10351959
type: EFO_0005072
part of: A-AFFY-130

(Assay) GSM1215249
type: Assay
has participant: A-AFFY-130

10514708
type: EFO_0005072
part of: A-AFFY-130

Hpd
type: EnsemblDatabaseReference

10593174
type: EFO_0005072
part of: A-AFFY-130

10568001
type: EFO_0005072
part of: A-AFFY-130

10542632
type: EFO_0005072
part of: A-AFFY-130

10537146
type: EFO_0005072
part of: A-AFFY-130

Mgll UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.42304040402144
p value: 7.21506081625591E-4
refers to: Mgll
refers to: 10539894
t statistic: 21.0259896055153

10366043
type: EFO_0005072
part of: A-AFFY-130

Gm10680 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.66143040470017
p value: 0.0395418178403798
refers to: Gm10680
refers to: 10593174
t statistic: 4.73699813746545

Srd5a2
type: EnsemblDatabaseReference

Depdc7
type: EnsemblDatabaseReference

Cpq
type: EnsemblDatabaseReference

Il1r1 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.54525849038964
p value: 0.02184371907482
refers to: 10345762
refers to: Il1r1
t statistic: -6.03438286434379

Mier3
type: EnsemblDatabaseReference

Gm21847 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.37741682344833
p value: 0.0245581974442629
refers to: Gm21847
refers to: 10519811
t statistic: -5.72024040673826

10450735
type: EFO_0005072
part of: A-AFFY-130

Ces1d DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -2.00925720101873
p value: 0.0160962141270763
refers to: Ces1d
refers to: 10580635
t statistic: -6.89907361548115

S100a14 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.43077093829041
p value: 0.0158420734646215
refers to: 10493794
refers to: S100a14
t statistic: 7.03880195149375

1700057G04Rik
type: EnsemblDatabaseReference

St6gal1 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.18466687731377
p value: 0.02184371907482
refers to: 10434758
refers to: St6gal1
t statistic: -5.99866661426597

Ckb
type: EnsemblDatabaseReference

Gm6086
type: EnsemblDatabaseReference

C1qa DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.66817380342579
p value: 0.0102381366447151
refers to: C1qa
refers to: 10517517
t statistic: -8.44997382639969

Eno3 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.39308653244266
p value: 0.0281924148183633
refers to: 10377938
refers to: Eno3
t statistic: 5.32632335887215

Pdia5 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13626209943038
p value: 0.00610453729848872
refers to: Pdia5
refers to: 10439218
t statistic: -10.1151242174283

Vnn1
type: EnsemblDatabaseReference

10509965
type: EFO_0005072
part of: A-AFFY-130

Areg UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.76509165749856
p value: 8.82258430360505E-4
refers to: Areg
refers to: 10523182
t statistic: 16.1392086705005

10496727
type: EFO_0005072
part of: A-AFFY-130

Muc4 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.60310993514641
p value: 0.0154163713242883
refers to: Muc4
refers to: 10435112
t statistic: 7.19967933148294

Tbl1xr1
type: EnsemblDatabaseReference

Slfn4
type: EnsemblDatabaseReference

Apol10a
type: EnsemblDatabaseReference

10391561
type: EFO_0005072
part of: A-AFFY-130

Pdk4
type: EnsemblDatabaseReference

Muc4
type: EnsemblDatabaseReference

Ndrg1 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.38359863047524
p value: 0.0270321926113934
refers to: Ndrg1
refers to: 10429140
t statistic: 5.40660413348728

Gch1 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.76316309053726
p value: 0.0131971767909016
refers to: 10419288
refers to: Gch1
t statistic: 7.56364914321906

10403291
type: EFO_0005072
part of: A-AFFY-130

Cmtm8
type: EnsemblDatabaseReference

Cxcl13
type: EnsemblDatabaseReference

(Assay) GSM1215253
type: Assay
has participant: A-AFFY-130

Gm1123
type: EnsemblDatabaseReference

Wfdc18
type: EnsemblDatabaseReference

10580635
type: EFO_0005072
part of: A-AFFY-130

Il1rn
type: EnsemblDatabaseReference

10386197
type: EFO_0005072
part of: A-AFFY-130

Areg
type: EnsemblDatabaseReference

10377938
type: EFO_0005072
part of: A-AFFY-130

St3gal4 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.28662887187978
p value: 0.0173382481067175
refers to: St3gal4
refers to: 10592084
t statistic: 6.69230787744874

Creb3l3 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.43240469183377
p value: 0.0429140823542681
refers to: 10371054
refers to: Creb3l3
t statistic: 4.54998349312767

Cyp2c68
type: EnsemblDatabaseReference

Vnn1 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.93205999634121
p value: 8.7316454590324E-4
refers to: Vnn1
refers to: 10362138
t statistic: 16.8280046826939

Mboat2
type: EnsemblDatabaseReference

Akr1c14 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.44950195777433
p value: 0.0395068895163618
refers to: Akr1c14
refers to: 10403291
t statistic: -4.7486733998469

Fam57a UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14570292258018
p value: 0.0173382481067175
refers to: Fam57a
refers to: 10378754
t statistic: 6.76954782271822

Pnliprp2 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.59442305919313
p value: 0.02184371907482
refers to: 10464328
refers to: Pnliprp2
t statistic: 5.9969895065064

10591022
type: EFO_0005072
part of: A-AFFY-130

Ero1l
type: EnsemblDatabaseReference

Cyp4f16
type: EnsemblDatabaseReference

10474700
type: EFO_0005072
part of: A-AFFY-130

10344347
type: EFO_0005072
part of: A-AFFY-130

Slc9a3
type: EnsemblDatabaseReference

Mptx1 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -2.00046566404674
p value: 0.00525825938488454
refers to: 10351959
refers to: Mptx1
t statistic: -10.6408897727248

Fam57a
type: EnsemblDatabaseReference

Zfp239
type: EnsemblDatabaseReference

Ppy
type: EnsemblDatabaseReference

Pbp2 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 3.93407332612256
p value: 0.00523030934613929
refers to: 10548779
refers to: Pbp2
t statistic: 11.1720950409898

Gm10680
type: EnsemblDatabaseReference

Iapp
type: EnsemblDatabaseReference

Sst
type: EnsemblDatabaseReference

Hpd
type: EnsemblDatabaseReference

Gchfr
type: EnsemblDatabaseReference

Ano1
type: EnsemblDatabaseReference

10436087
type: EFO_0005072
part of: A-AFFY-130

10391555
type: EFO_0005072
part of: A-AFFY-130

Anapc1
type: EnsemblDatabaseReference

Bend7
type: EnsemblDatabaseReference

Pdia5
type: EnsemblDatabaseReference

Cyp4f16 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.39663160934391
p value: 0.0251633422738544
refers to: Cyp4f16
refers to: 10443869
t statistic: 5.57414557930844

(Sample) genotype/IEC-specific HDAC3 deletion
type: EFO_0000001
property type: genotype
property value: IEC-specific HDAC3 deletion

A4gnt
type: EnsemblDatabaseReference

Eno3
type: EnsemblDatabaseReference

Pnliprp2
type: EnsemblDatabaseReference

10467979
type: EFO_0005072
part of: A-AFFY-130

Sptssb
type: EnsemblDatabaseReference

Hsd11b2 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10511501836261
p value: 0.0420621954886054
refers to: 10574780
refers to: Hsd11b2
t statistic: -4.58314079585353

St3gal5
type: EnsemblDatabaseReference

Fxyd3
type: EnsemblDatabaseReference

Me1 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.13191015082615
p value: 0.0122206640492226
refers to: 10595480
refers to: Me1
t statistic: 7.82361911418296

Gsdmc2 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -2.17447163373038
p value: 0.040469457464348
refers to: Gsdmc2
refers to: 10428955
t statistic: -4.65511321309166

Plcb1
type: EnsemblDatabaseReference

Scd1 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.50844671948719
p value: 0.0122206640492226
refers to: Scd1
refers to: 10467979
t statistic: 7.9662767262416

Gpt
type: EnsemblDatabaseReference

Mgll
type: EnsemblDatabaseReference

Sema7a
type: EnsemblDatabaseReference

Slc10a2
type: EnsemblDatabaseReference

Prap1
type: EnsemblDatabaseReference

(Factor value) GENOTYPE/IEC-specific HDAC3 deletion
type: EFO_0000001
property type: GENOTYPE
property value: IEC-specific HDAC3 deletion

10443869
type: EFO_0005072
part of: A-AFFY-130

10430425
type: EFO_0005072
part of: A-AFFY-130

10560608
type: EFO_0005072
part of: A-AFFY-130

10407145
type: EFO_0005072
part of: A-AFFY-130

Vsig2 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.70397361468649
p value: 0.0219289805585658
refers to: Vsig2
refers to: 10584325
t statistic: -5.98350500783942

10445112
type: EFO_0005072
part of: A-AFFY-130

Gjb5
type: EnsemblDatabaseReference

Gm1123 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -2.02276852995194
p value: 0.0120680129864891
refers to: Gm1123
refers to: 10595914
t statistic: -8.05486953697846

Ces1g
type: EnsemblDatabaseReference

Ephx2
type: EnsemblDatabaseReference

Pik3r3
type: EnsemblDatabaseReference

Sst UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.73772919758184
p value: 0.022115137478432
refers to: Sst
refers to: 10438730
t statistic: 5.93994999993052

10343467
type: EFO_0005072
part of: A-AFFY-130

Itch DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.24931262180714
p value: 0.022115137478432
refers to: Itch
refers to: 10340709
t statistic: -5.93347471953278

10438730
type: EFO_0005072
part of: A-AFFY-130

2210407C18Rik UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.97483051750532
p value: 0.00787035487843129
refers to: 10386197
refers to: 2210407C18Rik
t statistic: 9.03184632472771

4931406C07Rik
type: EnsemblDatabaseReference

Apoc2
type: EnsemblDatabaseReference

10568436
type: EFO_0005072
part of: A-AFFY-130

Hpgd DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11820454217126
p value: 0.0379006645444919
refers to: Hpgd
refers to: 10571840
t statistic: -4.84289607741493

10476401
type: EFO_0005072
part of: A-AFFY-130

Dlg1
type: EnsemblDatabaseReference

10569618
type: EFO_0005072
part of: A-AFFY-130

Pyy
type: EnsemblDatabaseReference

Apoc2 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.92323909699902
p value: 0.0411678756767708
refers to: Apoc2
refers to: 10560608
t statistic: 4.62410876154879

Gm10561 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01295825510691
p value: 0.0387539939991563
refers to: Gm10561
refers to: 10346321
t statistic: -4.81634808960627

Epha2
type: EnsemblDatabaseReference

Eid1
type: EnsemblDatabaseReference

Cmtm8
type: EnsemblDatabaseReference

10588132
type: EFO_0005072
part of: A-AFFY-130

BC021614 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.66624213344688
p value: 0.0122206640492226
refers to: 10464594
refers to: BC021614
t statistic: 7.93737016633403

Gm1123
type: EnsemblDatabaseReference

Pls3
type: EnsemblDatabaseReference

Wfdc18
type: EnsemblDatabaseReference

Cytip DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23482126116548
p value: 0.040469457464348
refers to: Cytip
refers to: 10482802
t statistic: -4.65499973452749

Cers4
type: EnsemblDatabaseReference

10423548
type: EFO_0005072
part of: A-AFFY-130

Cdc42ep2 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10008651003482
p value: 0.044595015920008
refers to: Cdc42ep2
refers to: 10465278
t statistic: 4.48948326511403

10523359
type: EFO_0005072
part of: A-AFFY-130

Gm6086 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.30327497785956
p value: 0.0177950814049235
refers to: Gm6086
refers to: 10348906
t statistic: -6.54500568545404

Hpgd
type: EnsemblDatabaseReference

Dfna5
type: EnsemblDatabaseReference

Mal DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -2.33687370979747
p value: 0.0154163713242883
refers to: Mal
refers to: 10487441
t statistic: -7.20977947992111

Cyp2c68 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.55640581280904
p value: 0.0119517019308088
refers to: Cyp2c68
refers to: 10467385
t statistic: -8.09437216235237

Hnf4g
type: EnsemblDatabaseReference

Sult1c2
type: EnsemblDatabaseReference

10348906
type: EFO_0005072
part of: A-AFFY-130

Thbs1
type: EnsemblDatabaseReference

2210407C18Rik
type: EnsemblDatabaseReference

Sult1a1
type: EnsemblDatabaseReference

Vsig2
type: EnsemblDatabaseReference

Mettl7a1
type: EnsemblDatabaseReference

10595914
type: EFO_0005072
part of: A-AFFY-130

Zfp239
type: EnsemblDatabaseReference

Myof
type: EnsemblDatabaseReference

Gdf15
type: EnsemblDatabaseReference

10524668
type: EFO_0005072
part of: A-AFFY-130

Cbr3
type: EnsemblDatabaseReference

Ero1l UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01024395483399
p value: 0.00523030934613929
refers to: Ero1l
refers to: 10419198
t statistic: 11.2563420831209

Cers4 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.33157974029415
p value: 0.0342310299439291
refers to: Cers4
refers to: 10569972
t statistic: -5.01749485478751

Pbp2
type: EnsemblDatabaseReference

Gml
type: EnsemblDatabaseReference

10597470
type: EFO_0005072
part of: A-AFFY-130

10389214
type: EFO_0005072
part of: A-AFFY-130

Ttyh1 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.54419155147948
p value: 0.0139559452243393
refers to: Ttyh1
refers to: 10549594
t statistic: 7.435721450616

Mucl1
type: EnsemblDatabaseReference

10592084
type: EFO_0005072
part of: A-AFFY-130

Gch1
type: EnsemblDatabaseReference

10482802
type: EFO_0005072
part of: A-AFFY-130

Slfn4 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.18985719048797
p value: 0.0325312815843272
refers to: Slfn4
refers to: 10379636
t statistic: 5.12970142938376

Fgfr2
type: EnsemblDatabaseReference

Anapc1
type: EnsemblDatabaseReference

10551531
type: EFO_0005072
part of: A-AFFY-130

Dusp6 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14949992872176
p value: 0.0403552637704904
refers to: Dusp6
refers to: 10366043
t statistic: 4.67079502594171

10439218
type: EFO_0005072
part of: A-AFFY-130

Sdc2 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.85110381489229
p value: 0.0101042840181585
refers to: Sdc2
refers to: 10423548
t statistic: -8.49970486772443

10366346
type: EFO_0005072
part of: A-AFFY-130

Bche DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.19210652762052
p value: 0.00523030934613929
refers to: Bche
refers to: 10498710
t statistic: -11.1378106547466

Slc37a2
type: EnsemblDatabaseReference

Sult1c2 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.53277704386659
p value: 0.0337966544236287
refers to: 10451818
refers to: Sult1c2
t statistic: -5.05600716548095

Eid1 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02793348861815
p value: 0.0415224837001366
refers to: Eid1
refers to: 10475625
t statistic: -4.60879086643224

Anxa13
type: EnsemblDatabaseReference

Slc37a2 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.97626211378993
p value: 0.0395418178403798
refers to: Slc37a2
refers to: 10592266
t statistic: -4.70258944239606

Calcb
type: EnsemblDatabaseReference

Sptssb
type: EnsemblDatabaseReference

Timp3
type: EnsemblDatabaseReference

St3gal5
type: EnsemblDatabaseReference

Rgs16
type: EnsemblDatabaseReference

Fxyd3
type: EnsemblDatabaseReference

Capg
type: EnsemblDatabaseReference

10595480
type: EFO_0005072
part of: A-AFFY-130

10580678
type: EFO_0005072
part of: A-AFFY-130

10519811
type: EFO_0005072
part of: A-AFFY-130

10405753
type: EFO_0005072
part of: A-AFFY-130

Creb3l3
type: EnsemblDatabaseReference

Retnlb
type: EnsemblDatabaseReference

Gm8074 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.39858649239355
p value: 8.7316454590324E-4
refers to: Gm8074
refers to: 10595145
t statistic: 16.464674602299

10465278
type: EFO_0005072
part of: A-AFFY-130

10379731
type: EFO_0005072
part of: A-AFFY-130

Scd1
type: EnsemblDatabaseReference

Ephx2 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.99166021651088
p value: 0.0219515949259228
refers to: 10420935
refers to: Ephx2
t statistic: -5.97582935348608

(Assay) GSM1215252
type: Assay
has participant: A-AFFY-130

Gjb5
type: EnsemblDatabaseReference

Ces1g
type: EnsemblDatabaseReference

Pik3r3
type: EnsemblDatabaseReference

Hsd11b2
type: EnsemblDatabaseReference

10435112
type: EFO_0005072
part of: A-AFFY-130

H2-T3 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.55542011928221
p value: 0.00525825938488454
refers to: 10450735
refers to: H2-T3
t statistic: -10.4600826954856

Wee1
type: EnsemblDatabaseReference

Epha2 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.35226303700061
p value: 0.035576009542324
refers to: Epha2
refers to: 10509965
t statistic: 4.94088837689802

Ndrg1
type: EnsemblDatabaseReference

Snrpn
type: EnsemblDatabaseReference

(Sample) strain/C57BL/6
type: EFO_0004472
property type: strain
property value: C57BL/6

Sult1a1 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.64355348132091
p value: 0.0245857391013394
refers to: 10568001
refers to: Sult1a1
t statistic: -5.68126712726154

Pik3r3 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08289637246059
p value: 0.0331556298268925
refers to: Pik3r3
refers to: 10507273
t statistic: -5.08177143552022

Pls3
type: EnsemblDatabaseReference

10605437
type: EFO_0005072
part of: A-AFFY-130

10592471
type: EFO_0005072
part of: A-AFFY-130

St6gal1
type: EnsemblDatabaseReference

Ubd UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.18042382285083
p value: 0.0420621954886054
refers to: 10445112
refers to: Ubd
t statistic: 4.58219618686117

Gm8074
type: EnsemblDatabaseReference

Ces1d
type: EnsemblDatabaseReference

10378754
type: EFO_0005072
part of: A-AFFY-130

10371054
type: EFO_0005072
part of: A-AFFY-130

Dfna5
type: EnsemblDatabaseReference

Plcb1 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00580519377524
p value: 0.0307691461776995
refers to: Plcb1
refers to: 10476401
t statistic: -5.19365370339121

Rbp7 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.54067854655603
p value: 0.00459182265613526
refers to: Rbp7
refers to: 10518674
t statistic: 11.7532645513401

Cytip
type: EnsemblDatabaseReference

Sycn
type: EnsemblDatabaseReference

10474526
type: EFO_0005072
part of: A-AFFY-130

Depdc7 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 1.22081229622001
p value: 0.047193647037234
refers to: Depdc7
refers to: 10485597
t statistic: 4.39831957887059

10498653
type: EFO_0005072
part of: A-AFFY-130

10579331
type: EFO_0005072
part of: A-AFFY-130

Akr1b8 UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.15627200716058
p value: 0.0151519292036135
refers to: 10537146
refers to: Akr1b8
t statistic: 7.26885281662318

10425037
type: EFO_0005072
part of: A-AFFY-130

Tmem176b
type: EnsemblDatabaseReference

10576901
type: EFO_0005072
part of: A-AFFY-130

Depdc7
type: EnsemblDatabaseReference

Pls3 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.33226316171235
p value: 0.0266264069446838
refers to: 10605437
refers to: Pls3
t statistic: -5.47700460281789

Cpq
type: EnsemblDatabaseReference

Gramd1b
type: EnsemblDatabaseReference

Mboat2 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06287332822036
p value: 0.0155006253919207
refers to: Mboat2
refers to: 10394990
t statistic: -7.17753185228883

Ckb UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 2.81779463231286
p value: 8.63276600491835E-4
refers to: 10402708
refers to: Ckb
t statistic: 18.2523487109152

1700057G04Rik
type: EnsemblDatabaseReference

10516490
type: EFO_0005072
part of: A-AFFY-130

10436500
type: EFO_0005072
part of: A-AFFY-130

Capg
type: EnsemblDatabaseReference

Dusp6
type: EnsemblDatabaseReference

Akr1c14
type: EnsemblDatabaseReference

Gm21847
type: EnsemblDatabaseReference

Me1
type: EnsemblDatabaseReference

10402708
type: EFO_0005072
part of: A-AFFY-130

Vnn1
type: EnsemblDatabaseReference

(Sample) growth condition/germ-free
type: EFO_0000001
property type: growth condition
property value: germ-free

Il1r1
type: EnsemblDatabaseReference

Apol10a DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11032528475895
p value: 0.0173382481067175
refers to: Apol10a
refers to: 10425037
t statistic: -6.63718413852306

Ubd
type: EnsemblDatabaseReference

Dfna5 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.94239929699118
p value: 0.0412472567040119
refers to: 10544644
refers to: Dfna5
t statistic: -4.61726041326186

Pdk4
type: EnsemblDatabaseReference

Plet1
type: EnsemblDatabaseReference

10419288
type: EFO_0005072
part of: A-AFFY-130

10592266
type: EFO_0005072
part of: A-AFFY-130

Gbe1
type: EnsemblDatabaseReference

Mier3 DOWN in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22762006931153
p value: 0.0173382481067175
refers to: Mier3
refers to: 10407145
t statistic: -6.61370474199684

Cxcl13
type: EnsemblDatabaseReference

10493794
type: EFO_0005072
part of: A-AFFY-130

(Sample) genotype/floxed HDAC3 (wild type)
type: EFO_0000001
property type: genotype
property value: floxed HDAC3 (wild type)

Ttyh1
type: EnsemblDatabaseReference

St3gal4
type: EnsemblDatabaseReference

Ereg UP in 'IEC-specific HDAC3 deletion' vs 'floxed HDAC3 (wild type)'
type: IncreasedDifferentialExpressionRatio
fold change: 3.03306737544327
p value: 8.63276600491835E-4
refers to: 10523175
refers to: Ereg
t statistic: 17.7445380109709