206418_at
type: EFO_0005072
part of: A-AFFY-44

E-GEOD-44029
type: microarray 1colour mrna differential
RO_0002162: Homo sapiens
description: We performed genome-wide screening using SW480 cells with Gankyrin knockdown on an Affymetrix gene expression array to identify the transcriptional targets of Gankyrin. Transcriptional profiling with samples from SW480 cells that were infected with control or gankyrin shRNA. Two condition experiment: control shRNA (three replicates) and NFIL3 shRNA (three replicates)
uses data from: http://identifiers.org/pubmed/23576566

214212_x_at
type: EFO_0005072
part of: A-AFFY-44

203809_s_at
type: EFO_0005072
part of: A-AFFY-44

RP11-669N7.2 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14820519270454
p value: 0.00532635554062246
refers to: RP11-669N7.2
refers to: 1569454_a_at
t statistic: 7.01511230954348

ALDH1A3
type: EnsemblDatabaseReference

TCN1
type: EnsemblDatabaseReference

215145_s_at
type: EFO_0005072
part of: A-AFFY-44

FRY
type: EnsemblDatabaseReference

NRP1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00738214558561
p value: 0.00181251103578713
refers to: NRP1
refers to: 210510_s_at
t statistic: -9.5488949214643

HEATR3
type: EnsemblDatabaseReference

204137_at
type: EFO_0005072
part of: A-AFFY-44

205691_at
type: EFO_0005072
part of: A-AFFY-44

FRY UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.38959490597762
p value: 0.00135540672684757
refers to: FRY
refers to: 214318_s_at
t statistic: 10.452948699851

219302_s_at
type: EFO_0005072
part of: A-AFFY-44

RASSF10
type: EnsemblDatabaseReference

217529_at
type: EFO_0005072
part of: A-AFFY-44

CNTNAP2
type: EnsemblDatabaseReference

GULP1
type: EnsemblDatabaseReference

DHRS9 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.51897707874234
p value: 8.59501236086033E-4
refers to: 224009_x_at
refers to: DHRS9
t statistic: -11.8286759265758

209875_s_at
type: EFO_0005072
part of: A-AFFY-44

DOCK5 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11763353255495
p value: 0.00135540672684757
refers to: 230263_s_at
refers to: DOCK5
t statistic: -10.4786765474945

ARL4C
type: EnsemblDatabaseReference

207380_x_at
type: EFO_0005072
part of: A-AFFY-44

MTUS1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16846167461535
p value: 4.41414807448432E-4
refers to: MTUS1
refers to: 212096_s_at
t statistic: -14.4634409607462

203729_at
type: EFO_0005072
part of: A-AFFY-44

223545_at
type: EFO_0005072
part of: A-AFFY-44

(Assay) GSM1077013
type: Assay
has participant: A-AFFY-44

LAMP3
type: EnsemblDatabaseReference

ZDHHC2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.25387347365866
p value: 0.0029687328475245
refers to: ZDHHC2
refers to: 244779_at
t statistic: -8.36280723069641

TLE3 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10898266295166
p value: 0.00559585738763817
refers to: 228340_at
refers to: TLE3
t statistic: -6.89222498423885

ANKRD29 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -2.2320445084826
p value: 8.45771403018332E-5
refers to: 238332_at
refers to: ANKRD29
t statistic: -24.8730509471256

HOTAIR DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -2.31391014234933
p value: 0.00149381453618726
refers to: HOTAIR
refers to: 239153_at
t statistic: -10.1580236143856

TCN1
type: EnsemblDatabaseReference

218149_s_at
type: EFO_0005072
part of: A-AFFY-44

ATRX UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.55063835626347
p value: 0.046612384605796
refers to: ATRX
refers to: 211022_s_at
t statistic: 3.34500297371118

MUC13 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13854511406175
p value: 0.0204512138159583
refers to: 222712_s_at
refers to: MUC13
t statistic: 4.46432501434721

FAM169A
type: EnsemblDatabaseReference

203373_at
type: EFO_0005072
part of: A-AFFY-44

212992_at
type: EFO_0005072
part of: A-AFFY-44

TM2D2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08637698854229
p value: 8.78891481680737E-4
refers to: TM2D2
refers to: 224413_s_at
t statistic: -11.7311992037837

CBX5 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.00989751657819
p value: 0.0210820127801418
refers to: CBX5
refers to: 231862_at
t statistic: 4.42172306491404

HPGD UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.38200208574372
p value: 0.00191013511475297
refers to: HPGD
refers to: 203914_x_at
t statistic: 9.38584225641394

NOX1 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06324598158263
p value: 0.00378695269084276
refers to: NOX1
refers to: 210808_s_at
t statistic: 7.80981451425197

243764_at
type: EFO_0005072
part of: A-AFFY-44

RNF170 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.05626263388573
p value: 0.00165557946352679
refers to: RNF170
refers to: 226104_at
t statistic: -9.84952413027624

205305_at
type: EFO_0005072
part of: A-AFFY-44

239576_at
type: EFO_0005072
part of: A-AFFY-44

SYNGR3
type: EnsemblDatabaseReference

MUC13
type: EnsemblDatabaseReference

LGALS1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.67268078094575
p value: 3.91349840387239E-4
refers to: LGALS1
refers to: 201105_at
t statistic: -15.0921245634737

AL133493.2
type: EnsemblDatabaseReference

SOCS3
type: EnsemblDatabaseReference

HGD
type: EnsemblDatabaseReference

ADCY9
type: EnsemblDatabaseReference

206463_s_at
type: EFO_0005072
part of: A-AFFY-44

213317_at
type: EFO_0005072
part of: A-AFFY-44

GULP1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -2.70033289796535
p value: 9.77458484025748E-4
refers to: 204235_s_at
refers to: GULP1
t statistic: -11.3756387703324

GPR137B
type: EnsemblDatabaseReference

CXCL1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22954187899445
p value: 0.00594268760792998
refers to: 204470_at
refers to: CXCL1
t statistic: -6.69023441263436

SEMA3A
type: EnsemblDatabaseReference

205969_at
type: EFO_0005072
part of: A-AFFY-44

MAN1A1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.18055302944144
p value: 0.00135540672684757
refers to: MAN1A1
refers to: 221760_at
t statistic: -10.5029888849819

AKR1B10
type: EnsemblDatabaseReference

206167_s_at
type: EFO_0005072
part of: A-AFFY-44

221760_at
type: EFO_0005072
part of: A-AFFY-44

PROX1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.83476119530829
p value: 3.04307969892788E-4
refers to: PROX1
refers to: 229376_at
t statistic: -16.6077640216068

211022_s_at
type: EFO_0005072
part of: A-AFFY-44

NRP1
type: EnsemblDatabaseReference

CCL20 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.59700400760334
p value: 0.0023264205039521
refers to: CCL20
refers to: 205476_at
t statistic: -8.9630840018448

HMGA2
type: EnsemblDatabaseReference

LRP12 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03248307635713
p value: 0.0031112281411158
refers to: LRP12
refers to: 219631_at
t statistic: 8.29267389792114

RASSF10 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12368556282253
p value: 0.00950057862551699
refers to: RASSF10
refers to: 238755_at
t statistic: -5.78556169117717

EMP3
type: EnsemblDatabaseReference

DHRS2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -2.44128711044278
p value: 3.14602937703718E-4
refers to: DHRS2
refers to: 214079_at
t statistic: -16.0716528018772

ZNF252P
type: EnsemblDatabaseReference

ZNF185 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17610441036655
p value: 7.39491479995969E-4
refers to: ZNF185
refers to: 203585_at
t statistic: -12.7702183944993

KYNU
type: EnsemblDatabaseReference

205569_at
type: EFO_0005072
part of: A-AFFY-44

CXCL8
type: EnsemblDatabaseReference

205352_at
type: EFO_0005072
part of: A-AFFY-44

APCDD1L-AS1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11675645697065
p value: 0.0025504997783559
refers to: APCDD1L-AS1
refers to: 1559433_at
t statistic: -8.70834101696869

MTUS1
type: EnsemblDatabaseReference

212190_at
type: EFO_0005072
part of: A-AFFY-44

(Sample) genotype/control
type: EFO_0000001
property type: genotype
property value: control

FSCN1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.29321530373824
p value: 0.00953024959757742
refers to: FSCN1
refers to: 201564_s_at
t statistic: -5.77820008321716

ZDHHC2
type: EnsemblDatabaseReference

1561757_a_at
type: EFO_0005072
part of: A-AFFY-44

230831_at
type: EFO_0005072
part of: A-AFFY-44

215913_s_at
type: EFO_0005072
part of: A-AFFY-44

COL4A1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1403619402012
p value: 0.00233855575215273
refers to: COL4A1
refers to: 211980_at
t statistic: -8.95048166854166

ZNF185
type: EnsemblDatabaseReference

SMOC2
type: EnsemblDatabaseReference

CBX5
type: EnsemblDatabaseReference

212509_s_at
type: EFO_0005072
part of: A-AFFY-44

ACOT4
type: EnsemblDatabaseReference

WWTR1
type: EnsemblDatabaseReference

222731_at
type: EFO_0005072
part of: A-AFFY-44

WWTR1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.42311633882138
p value: 2.04115982148003E-4
refers to: 202133_at
refers to: WWTR1
t statistic: -19.0685076057581

GULP1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -2.02843847206621
p value: 7.00034793931097E-4
refers to: 215913_s_at
refers to: GULP1
t statistic: -12.9718213665159

(Assay) GSM1077015
type: Assay
has participant: A-AFFY-44

204126_s_at
type: EFO_0005072
part of: A-AFFY-44

MMP10
type: EnsemblDatabaseReference

DUSP4
type: EnsemblDatabaseReference

VCAN DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.09639797861584
p value: 0.00228512794659597
refers to: VCAN
refers to: 204620_s_at
t statistic: -9.004080634351

SPRR1A
type: EnsemblDatabaseReference

APCDD1L-AS1
type: EnsemblDatabaseReference

CLDN23
type: EnsemblDatabaseReference

PDE9A
type: EnsemblDatabaseReference

GULP1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -2.69100323064269
p value: 2.13336423248962E-4
refers to: GULP1
refers to: 204237_at
t statistic: -17.9491734669743

MXRA7
type: EnsemblDatabaseReference

SUCNR1
type: EnsemblDatabaseReference

KYNU UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.24694064826064
p value: 0.0188620592196876
refers to: 217388_s_at
refers to: KYNU
t statistic: 4.58115528191428

CXCL2
type: EnsemblDatabaseReference

CLIC5
type: EnsemblDatabaseReference

FAM43A
type: EnsemblDatabaseReference

217388_s_at
type: EFO_0005072
part of: A-AFFY-44

TNFAIP6
type: EnsemblDatabaseReference

COL4A1
type: EnsemblDatabaseReference

AKT2
type: EnsemblDatabaseReference

ANXA13
type: EnsemblDatabaseReference

DDC
type: EnsemblDatabaseReference

ANXA13 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.65772873559861
p value: 3.14602937703718E-4
refers to: 208323_s_at
refers to: ANXA13
t statistic: 16.0556447480737

203585_at
type: EFO_0005072
part of: A-AFFY-44

218807_at
type: EFO_0005072
part of: A-AFFY-44

FAM134B
type: EnsemblDatabaseReference

IRS2
type: EnsemblDatabaseReference

IL32
type: EnsemblDatabaseReference

NOX1 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.83662319537979
p value: 0.0303048304790823
refers to: 207380_x_at
refers to: NOX1
t statistic: 3.86798519404817

AKAP12
type: EnsemblDatabaseReference

201105_at
type: EFO_0005072
part of: A-AFFY-44

205673_s_at
type: EFO_0005072
part of: A-AFFY-44

MMP10
type: EnsemblDatabaseReference

AGR3 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21985588195728
p value: 9.77458484025748E-4
refers to: AGR3
refers to: 228241_at
t statistic: 11.355984510372

CDKN1C
type: EnsemblDatabaseReference

DUSP4
type: EnsemblDatabaseReference

AKAP12 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -3.08912582337664
p value: 1.63424864339798E-4
refers to: 227529_s_at
refers to: AKAP12
t statistic: -20.3873987211816

CNTNAP2 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.47684081006012
p value: 7.86041433735835E-4
refers to: CNTNAP2
refers to: 215145_s_at
t statistic: 12.0840880890181

VCAN
type: EnsemblDatabaseReference

DNAJC6
type: EnsemblDatabaseReference

HMGA2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.45541718947389
p value: 0.00375331360767868
refers to: HMGA2
refers to: 1558683_a_at
t statistic: -7.84362015232441

ST3GAL1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.18316370826692
p value: 0.012172113216545
refers to: ST3GAL1
refers to: 225033_at
t statistic: -5.33779483669556

ZDHHC2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.47477127042608
p value: 4.0976967024175E-4
refers to: ZDHHC2
refers to: 222731_at
t statistic: -14.9245011511583

ANKRD29
type: EnsemblDatabaseReference

231964_at
type: EFO_0005072
part of: A-AFFY-44

ST3GAL1
type: EnsemblDatabaseReference

DSC2
type: EnsemblDatabaseReference

VAV3 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15927368134546
p value: 0.00139221193752007
refers to: VAV3
refers to: 218806_s_at
t statistic: 10.378682807245

CPVL
type: EnsemblDatabaseReference

BMP2
type: EnsemblDatabaseReference

204933_s_at
type: EFO_0005072
part of: A-AFFY-44

209209_s_at
type: EFO_0005072
part of: A-AFFY-44

SDCBP2
type: EnsemblDatabaseReference

PKIB DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17936769069552
p value: 0.00435768736401258
refers to: PKIB
refers to: 231120_x_at
t statistic: -7.45587549095986

CSRP2
type: EnsemblDatabaseReference

TNFAIP6
type: EnsemblDatabaseReference

LAMP3 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2711330700064
p value: 7.46935412408757E-4
refers to: LAMP3
refers to: 205569_at
t statistic: -12.6915239634184

HIP1
type: EnsemblDatabaseReference

PLTP
type: EnsemblDatabaseReference

AHNAK2
type: EnsemblDatabaseReference

TNFRSF10D
type: EnsemblDatabaseReference

ASB9 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.26492540345206
p value: 0.00344259389100451
refers to: ASB9
refers to: 205673_s_at
t statistic: 8.03266297172882

RNF170
type: EnsemblDatabaseReference

PCSK9
type: EnsemblDatabaseReference

CDC45
type: EnsemblDatabaseReference

SPP1 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.5818090091649
p value: 0.00113576350874338
refers to: SPP1
refers to: 209875_s_at
t statistic: 10.9691600290282

SLC23A1 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.11520578749499
p value: 0.00113595736648057
refers to: SLC23A1
refers to: 223732_at
t statistic: 10.9393238318344

202074_s_at
type: EFO_0005072
part of: A-AFFY-44

PITPNC1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.45771457221969
p value: 0.00179862627501628
refers to: PITPNC1
refers to: 238649_at
t statistic: -9.59764647504018

(Assay) GSM1077014
type: Assay
has participant: A-AFFY-44

218276_s_at
type: EFO_0005072
part of: A-AFFY-44

MREG
type: EnsemblDatabaseReference

CLRN3 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.17846560018421
p value: 0.00284365457444281
refers to: CLRN3
refers to: 229777_at
t statistic: 8.46020992025566

205593_s_at
type: EFO_0005072
part of: A-AFFY-44

CPVL DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.46304205555047
p value: 5.60932334502525E-4
refers to: 208146_s_at
refers to: CPVL
t statistic: -13.6897340245579

NME4
type: EnsemblDatabaseReference

PROX1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.65430008100305
p value: 0.00280611096544826
refers to: PROX1
refers to: 228656_at
t statistic: -8.48198466080508

218723_s_at
type: EFO_0005072
part of: A-AFFY-44

210933_s_at
type: EFO_0005072
part of: A-AFFY-44

POU2AF1
type: EnsemblDatabaseReference

214318_s_at
type: EFO_0005072
part of: A-AFFY-44

ALDH1A3 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00745881771776
p value: 0.00165557946352679
refers to: ALDH1A3
refers to: 203180_at
t statistic: -9.84000171955913

211019_s_at
type: EFO_0005072
part of: A-AFFY-44

OPTN
type: EnsemblDatabaseReference

212345_s_at
type: EFO_0005072
part of: A-AFFY-44

DSC2
type: EnsemblDatabaseReference

CPVL
type: EnsemblDatabaseReference

CLIC5 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11463640055078
p value: 0.00135540672684757
refers to: CLIC5
refers to: 213317_at
t statistic: -10.4788964524423

KLK10 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08920294016995
p value: 0.00276820275566569
refers to: KLK10
refers to: 209792_s_at
t statistic: -8.52284102174259

214347_s_at
type: EFO_0005072
part of: A-AFFY-44

SERPINE2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.55108661040101
p value: 6.98062593070331E-4
refers to: 212190_at
refers to: SERPINE2
t statistic: -13.0138736979574

RP11-669N7.2
type: EnsemblDatabaseReference

AKAP12 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -2.50584003596591
p value: 2.04115982148003E-4
refers to: AKAP12
refers to: 210517_s_at
t statistic: -18.6672499390816

SYNGR3 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16600326399123
p value: 0.0159575942720091
refers to: 205691_at
refers to: SYNGR3
t statistic: -4.86508610211478

205476_at
type: EFO_0005072
part of: A-AFFY-44

MAN1A1
type: EnsemblDatabaseReference

TLE3
type: EnsemblDatabaseReference

ORAI2
type: EnsemblDatabaseReference

FRMD5 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.35533497205136
p value: 0.00127482471176882
refers to: FRMD5
refers to: 230831_at
t statistic: -10.6829710320219

CCL22 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16000207994899
p value: 0.0238665719402652
refers to: 207861_at
refers to: CCL22
t statistic: -4.19715378389903

TCEAL8 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.24337442547879
p value: 0.00741587847019495
refers to: TCEAL8
refers to: 224819_at
t statistic: -6.21338657820668

SPP1
type: EnsemblDatabaseReference

TNFAIP6 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2150780338149
p value: 0.0104687726654218
refers to: TNFAIP6
refers to: 206025_s_at
t statistic: 5.59422802847191

PITPNC1
type: EnsemblDatabaseReference

CNTNAP2 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.38393291455526
p value: 0.0181874740228562
refers to: CNTNAP2
refers to: 219302_s_at
t statistic: 4.63196566652694

RNF170
type: EnsemblDatabaseReference

MATN2
type: EnsemblDatabaseReference

SERPINI1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.45825669908187
p value: 3.16714864964604E-4
refers to: SERPINI1
refers to: 205352_at
t statistic: -15.8458215438712

FERMT2
type: EnsemblDatabaseReference

MXRA7 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.75905031908998
p value: 3.08127146102603E-4
refers to: 212509_s_at
refers to: MXRA7
t statistic: -16.4088257584934

CTSB
type: EnsemblDatabaseReference

PROX1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01244218282526
p value: 0.0246692385502666
refers to: PROX1
refers to: 207401_at
t statistic: -4.14544187579196

CREB3L2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.39839172967197
p value: 9.21855099111608E-4
refers to: CREB3L2
refers to: 212345_s_at
t statistic: -11.521764663924

SLC39A8 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.55833155506504
p value: 0.00629736888531444
refers to: SLC39A8
refers to: 219869_s_at
t statistic: 6.56147975291482

209696_at
type: EFO_0005072
part of: A-AFFY-44

ZNF395 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0204562058418
p value: 0.00624905719529169
refers to: ZNF395
refers to: 218149_s_at
t statistic: -6.58629523125126

LGALS1
type: EnsemblDatabaseReference

DDC UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14583372216867
p value: 6.21220831358866E-4
refers to: DDC
refers to: 205311_at
t statistic: 13.4238574959785

OPTN
type: EnsemblDatabaseReference

AADAC
type: EnsemblDatabaseReference

HEATR3 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02742461552109
p value: 0.030770409754047
refers to: HEATR3
refers to: 1554478_a_at
t statistic: 3.85000589844287

NTSR1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.64717585491983
p value: 9.02620705183614E-4
refers to: NTSR1
refers to: 207360_s_at
t statistic: -11.6073377961921

CXCL8 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15302855769608
p value: 9.02620705183614E-4
refers to: CXCL8
refers to: 202859_x_at
t statistic: -11.5919484830979

228241_at
type: EFO_0005072
part of: A-AFFY-44

1559433_at
type: EFO_0005072
part of: A-AFFY-44

TOX2
type: EnsemblDatabaseReference

NRP1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.94162508399357
p value: 9.02620705183614E-4
refers to: 212298_at
refers to: NRP1
t statistic: -11.6502146345271

HSPA1A
type: EnsemblDatabaseReference

LSS
type: EnsemblDatabaseReference

ZNF395
type: EnsemblDatabaseReference

KRT23 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10795905179701
p value: 0.00361822692275146
refers to: KRT23
refers to: 218963_s_at
t statistic: 7.9402353752902

MTL5
type: EnsemblDatabaseReference

STEAP4
type: EnsemblDatabaseReference

AKT2 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.16613064876193
p value: 0.0394871114740571
refers to: AKT2
refers to: 203809_s_at
t statistic: 3.53720552502667

1554478_a_at
type: EFO_0005072
part of: A-AFFY-44

TCEAL8
type: EnsemblDatabaseReference

ARHGAP6 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.69042545214316
p value: 2.13336423248962E-4
refers to: 206167_s_at
refers to: ARHGAP6
t statistic: 17.9986592246527

STEAP4 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.52912648913214
p value: 5.60932334502525E-4
refers to: STEAP4
refers to: 225987_at
t statistic: -13.7680450783147

FERMT2
type: EnsemblDatabaseReference

203691_at
type: EFO_0005072
part of: A-AFFY-44

CREB3L2
type: EnsemblDatabaseReference

CTSB
type: EnsemblDatabaseReference

SLCO1B3
type: EnsemblDatabaseReference

219786_at
type: EFO_0005072
part of: A-AFFY-44

1558722_at
type: EFO_0005072
part of: A-AFFY-44

ANGPT1
type: EnsemblDatabaseReference

CXCL1
type: EnsemblDatabaseReference

CLDN23 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.31798348193446
p value: 0.00481889425049541
refers to: CLDN23
refers to: 228707_at
t statistic: -7.21995691445689

DSC2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3807879220892
p value: 7.74592187321223E-4
refers to: DSC2
refers to: 231033_at
t statistic: -12.2765407156895

LRRC19
type: EnsemblDatabaseReference

VAV3 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.20768352309486
p value: 4.41414807448432E-4
refers to: VAV3
refers to: 218807_at
t statistic: 14.498500974938

VSIG1
type: EnsemblDatabaseReference

DHRS2
type: EnsemblDatabaseReference

SDCBP2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02233619624019
p value: 0.00550463505896575
refers to: SDCBP2
refers to: 233565_s_at
t statistic: -6.92728589049049

NME4 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.48226735614074
p value: 7.74592187321223E-4
refers to: 212739_s_at
refers to: NME4
t statistic: -12.3857031895775

SEPT6
type: EnsemblDatabaseReference

RGCC DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.63406289935043
p value: 5.60932334502525E-4
refers to: 218723_s_at
refers to: RGCC
t statistic: -13.6547459027101

TM2D2
type: EnsemblDatabaseReference

KRT23
type: EnsemblDatabaseReference

PPAPDC1B
type: EnsemblDatabaseReference

NEB
type: EnsemblDatabaseReference

IKBIP DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.44008777422785
p value: 0.00191013511475297
refers to: 227295_at
refers to: IKBIP
t statistic: -9.38498061987149

KLK10
type: EnsemblDatabaseReference

CBX5 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02502339197406
p value: 0.0221571511698422
refers to: CBX5
refers to: 226085_at
t statistic: 4.33925741813175

202133_at
type: EFO_0005072
part of: A-AFFY-44

SEPT6 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02882769939179
p value: 0.0119531245654811
refers to: 212414_s_at
refers to: SEPT6
t statistic: -5.37002927542871

AGR3
type: EnsemblDatabaseReference

CST1
type: EnsemblDatabaseReference

TCEAL8
type: EnsemblDatabaseReference

FGL1
type: EnsemblDatabaseReference

214307_at
type: EFO_0005072
part of: A-AFFY-44

233565_s_at
type: EFO_0005072
part of: A-AFFY-44

RP11-401P9.4
type: EnsemblDatabaseReference

LSS UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.39759623263072
p value: 0.0466265435922305
refers to: LSS
refers to: 211019_s_at
t statistic: 3.34464183347822

SLCO1B3 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23087488231178
p value: 0.00361822692275146
refers to: SLCO1B3
refers to: 206354_at
t statistic: -7.94432547991078

CEACAM5
type: EnsemblDatabaseReference

222712_s_at
type: EFO_0005072
part of: A-AFFY-44

CXCL1
type: EnsemblDatabaseReference

213348_at
type: EFO_0005072
part of: A-AFFY-44

AADAC UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.42430602649438
p value: 2.18071498107306E-4
refers to: 205969_at
refers to: AADAC
t statistic: 17.7332344474525

LRP12
type: EnsemblDatabaseReference

TRIM36 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04357735932375
p value: 0.00237937644896716
refers to: 219736_at
refers to: TRIM36
t statistic: -8.922637834631

209185_s_at
type: EFO_0005072
part of: A-AFFY-44

MMP10 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -2.7261204626991
p value: 2.45020348727197E-4
refers to: MMP10
refers to: 205680_at
t statistic: -17.3107155268346

RGCC
type: EnsemblDatabaseReference

228656_at
type: EFO_0005072
part of: A-AFFY-44

209392_at
type: EFO_0005072
part of: A-AFFY-44

(Assay) GSM1077012
type: Assay
has participant: A-AFFY-44

ORAI2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0787835400359
p value: 0.0185829724397234
refers to: 217529_at
refers to: ORAI2
t statistic: -4.60071296530826

KRT23
type: EnsemblDatabaseReference

FAM134B UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.31487935514093
p value: 2.13336423248962E-4
refers to: 218510_x_at
refers to: FAM134B
t statistic: 17.9660821773269

ZDHHC2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2446814884423
p value: 6.44881637193776E-4
refers to: 222730_s_at
refers to: ZDHHC2
t statistic: -13.3137050303937

FRMD5
type: EnsemblDatabaseReference

ALDH1A3
type: EnsemblDatabaseReference

219736_at
type: EFO_0005072
part of: A-AFFY-44

228707_at
type: EFO_0005072
part of: A-AFFY-44

ENPP2
type: EnsemblDatabaseReference

227697_at
type: EFO_0005072
part of: A-AFFY-44

RAB7B
type: EnsemblDatabaseReference

TOX2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.40794452174581
p value: 7.74592187321223E-4
refers to: TOX2
refers to: 228737_at
t statistic: -12.4720558512174

SLC39A8 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.19796714786767
p value: 4.10745738049993E-4
refers to: SLC39A8
refers to: 209267_s_at
t statistic: 14.851954293541

PI3 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.25735601355857
p value: 0.0374135496276403
refers to: 203691_at
refers to: PI3
t statistic: -3.6085149315854

RASSF10
type: EnsemblDatabaseReference

229777_at
type: EFO_0005072
part of: A-AFFY-44

PROX1
type: EnsemblDatabaseReference

GULP1
type: EnsemblDatabaseReference

CNTNAP2
type: EnsemblDatabaseReference

FSCN1
type: EnsemblDatabaseReference

238332_at
type: EFO_0005072
part of: A-AFFY-44

ARHGAP6
type: EnsemblDatabaseReference

219485_s_at
type: EFO_0005072
part of: A-AFFY-44

219648_at
type: EFO_0005072
part of: A-AFFY-44

CCND1
type: EnsemblDatabaseReference

EMP1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10422796267504
p value: 0.00135540672684757
refers to: EMP1
refers to: 201325_s_at
t statistic: -10.464545043116

SUCNR1 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1232016163805
p value: 3.14602937703718E-4
refers to: SUCNR1
refers to: 223939_at
t statistic: 15.9505951522148

VCAN DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15476876236407
p value: 0.00386451772903513
refers to: 221731_x_at
refers to: VCAN
t statistic: -7.73666328843355

LAMP3
type: EnsemblDatabaseReference

(Assay) GSM1077010
type: Assay
has participant: A-AFFY-44

TNFRSF10D DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.34529827498998
p value: 0.00112956213495303
refers to: TNFRSF10D
refers to: 227345_at
t statistic: -11.0021391018407

230263_s_at
type: EFO_0005072
part of: A-AFFY-44

CCL22
type: EnsemblDatabaseReference

ENPP2
type: EnsemblDatabaseReference

DOCK5
type: EnsemblDatabaseReference

GPR137B DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16933106194966
p value: 0.00197573789434613
refers to: 204137_at
refers to: GPR137B
t statistic: -9.28850982336462

1554436_a_at
type: EFO_0005072
part of: A-AFFY-44

227295_at
type: EFO_0005072
part of: A-AFFY-44

SLC39A8
type: EnsemblDatabaseReference

EMP1
type: EnsemblDatabaseReference

PI3
type: EnsemblDatabaseReference

FANCD2
type: EnsemblDatabaseReference

DDC UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.49096217155072
p value: 0.0143766225329152
refers to: DDC
refers to: 214347_s_at
t statistic: 5.04062337044632

LCN2
type: EnsemblDatabaseReference

207030_s_at
type: EFO_0005072
part of: A-AFFY-44

VSIG1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.05826460203237
p value: 7.74592187321223E-4
refers to: VSIG1
refers to: 243764_at
t statistic: -12.3238765126944

206354_at
type: EFO_0005072
part of: A-AFFY-44

CTSB DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11230372211607
p value: 7.2186577419853E-4
refers to: CTSB
refers to: 200839_s_at
t statistic: -12.846576511037

AKR1B10 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2343369319655
p value: 8.1928981701079E-4
refers to: AKR1B10
refers to: 206561_s_at
t statistic: 11.9622161872149

AHNAK2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -2.00069121658344
p value: 2.04115982148003E-4
refers to: AHNAK2
refers to: 212992_at
t statistic: -18.6431789330986

(Assay) GSM1077011
type: Assay
has participant: A-AFFY-44

203914_x_at
type: EFO_0005072
part of: A-AFFY-44

MUC13
type: EnsemblDatabaseReference

AL133493.2
type: EnsemblDatabaseReference

207360_s_at
type: EFO_0005072
part of: A-AFFY-44

SOCS3
type: EnsemblDatabaseReference

HGD
type: EnsemblDatabaseReference

ADCY9 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13409851432398
p value: 0.005432742372675
refers to: ADCY9
refers to: 204497_at
t statistic: -6.96446382655725

ADCY9
type: EnsemblDatabaseReference

208146_s_at
type: EFO_0005072
part of: A-AFFY-44

244163_at
type: EFO_0005072
part of: A-AFFY-44

GPR137B
type: EnsemblDatabaseReference

1558682_at
type: EFO_0005072
part of: A-AFFY-44

204237_at
type: EFO_0005072
part of: A-AFFY-44

RP11-401P9.4 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.07332439492493
p value: 0.00218702524706809
refers to: 229613_at
refers to: RP11-401P9.4
t statistic: -9.09459372068467

SLC23A1
type: EnsemblDatabaseReference

MREG DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16474047772441
p value: 7.74592187321223E-4
refers to: MREG
refers to: 219648_at
t statistic: -12.1685011450805

SLC39A8
type: EnsemblDatabaseReference

EMP1
type: EnsemblDatabaseReference

ANGPT1 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45471812158322
p value: 0.00261124626834191
refers to: ANGPT1
refers to: 205608_s_at
t statistic: 8.6573614404854

EMP3
type: EnsemblDatabaseReference

212096_s_at
type: EFO_0005072
part of: A-AFFY-44

214079_at
type: EFO_0005072
part of: A-AFFY-44

ZNF252P
type: EnsemblDatabaseReference

224009_x_at
type: EFO_0005072
part of: A-AFFY-44

CLRN3
type: EnsemblDatabaseReference

227529_s_at
type: EFO_0005072
part of: A-AFFY-44

224819_at
type: EFO_0005072
part of: A-AFFY-44

ASB9
type: EnsemblDatabaseReference

ZDHHC2
type: EnsemblDatabaseReference

REG4
type: EnsemblDatabaseReference

204932_at
type: EFO_0005072
part of: A-AFFY-44

212298_at
type: EFO_0005072
part of: A-AFFY-44

224221_s_at
type: EFO_0005072
part of: A-AFFY-44

1569025_s_at
type: EFO_0005072
part of: A-AFFY-44

ZNF185
type: EnsemblDatabaseReference

226034_at
type: EFO_0005072
part of: A-AFFY-44

FERMT2 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.28671788443145
p value: 0.00515341756428278
refers to: 209209_s_at
refers to: FERMT2
t statistic: 7.06423560244859

1554577_a_at
type: EFO_0005072
part of: A-AFFY-44

207469_s_at
type: EFO_0005072
part of: A-AFFY-44

218510_x_at
type: EFO_0005072
part of: A-AFFY-44

ACOT4
type: EnsemblDatabaseReference

WWTR1
type: EnsemblDatabaseReference

FAM13A
type: EnsemblDatabaseReference

PDE9A DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13319139475447
p value: 0.0067453244849237
refers to: PDE9A
refers to: 205593_s_at
t statistic: -6.40180219927093

221731_x_at
type: EFO_0005072
part of: A-AFFY-44

213954_at
type: EFO_0005072
part of: A-AFFY-44

AL133493.2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00312986267642
p value: 0.00966865462068023
refers to: AL133493.2
refers to: 1568817_at
t statistic: -5.73674424029314

202350_s_at
type: EFO_0005072
part of: A-AFFY-44

226085_at
type: EFO_0005072
part of: A-AFFY-44

TNFRSF11B DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.36954152386216
p value: 0.00177865480922053
refers to: TNFRSF11B
refers to: 204932_at
t statistic: -9.66197175439948

219300_s_at
type: EFO_0005072
part of: A-AFFY-44

SPRR1A
type: EnsemblDatabaseReference

CLDN23
type: EnsemblDatabaseReference

NTSR1
type: EnsemblDatabaseReference

CLRN3
type: EnsemblDatabaseReference

IL32 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -2.40061469649912
p value: 0.00148483338623143
refers to: IL32
refers to: 203828_s_at
t statistic: -10.2077275416557

CNTNAP2 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.07469430250204
p value: 0.00480647685055476
refers to: CNTNAP2
refers to: 219300_s_at
t statistic: 7.23171208233869

HPGD UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.41532737674958
p value: 7.74592187321223E-4
refers to: HPGD
refers to: 203913_s_at
t statistic: 12.1975335669819

REG4 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.3084589136198
p value: 0.0185085037404513
refers to: 1554436_a_at
refers to: REG4
t statistic: 4.60655428363156

NEB UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.77352499977654
p value: 2.04115982148003E-4
refers to: NEB
refers to: 205054_at
t statistic: 18.9814461348579

CXCL2
type: EnsemblDatabaseReference

PSMD10
type: EnsemblDatabaseReference

HIP1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.28012020605496
p value: 0.016877900196046
refers to: HIP1
refers to: 226364_at
t statistic: -4.7655101278386

204497_at
type: EFO_0005072
part of: A-AFFY-44

209792_s_at
type: EFO_0005072
part of: A-AFFY-44

CCL20
type: EnsemblDatabaseReference

REG4
type: EnsemblDatabaseReference

CLIC5
type: EnsemblDatabaseReference

210808_s_at
type: EFO_0005072
part of: A-AFFY-44

HGD UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.44292139386202
p value: 7.74592187321223E-4
refers to: 214308_s_at
refers to: HGD
t statistic: 12.2986694449224

208323_s_at
type: EFO_0005072
part of: A-AFFY-44

AKT2
type: EnsemblDatabaseReference

202207_at
type: EFO_0005072
part of: A-AFFY-44

DDC
type: EnsemblDatabaseReference

207217_s_at
type: EFO_0005072
part of: A-AFFY-44

206025_s_at
type: EFO_0005072
part of: A-AFFY-44

SAV1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06345685603528
p value: 0.00486242789303814
refers to: 218276_s_at
refers to: SAV1
t statistic: -7.1892351812203

FAM13A
type: EnsemblDatabaseReference

CD200
type: EnsemblDatabaseReference

CTHRC1
type: EnsemblDatabaseReference

PIR
type: EnsemblDatabaseReference

FAM134B
type: EnsemblDatabaseReference

225987_at
type: EFO_0005072
part of: A-AFFY-44

IRS2
type: EnsemblDatabaseReference

IL32
type: EnsemblDatabaseReference

(Factor value) RNA_INTERFERENCE/gankyrin shRNA
type: EFO_0000001
property type: RNA_INTERFERENCE
property value: gankyrin shRNA

EMP3 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10965574912603
p value: 0.00138334789086138
refers to: EMP3
refers to: 203729_at
t statistic: -10.3996243667266

229534_at
type: EFO_0005072
part of: A-AFFY-44

NOX1 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04838618147682
p value: 6.94602426284141E-4
refers to: 206418_at
refers to: NOX1
t statistic: 13.0606538266155

DNAJC6
type: EnsemblDatabaseReference

NOX1
type: EnsemblDatabaseReference

209210_s_at
type: EFO_0005072
part of: A-AFFY-44

ANKRD29
type: EnsemblDatabaseReference

222730_s_at
type: EFO_0005072
part of: A-AFFY-44

205054_at
type: EFO_0005072
part of: A-AFFY-44

1558683_a_at
type: EFO_0005072
part of: A-AFFY-44

TRIM36
type: EnsemblDatabaseReference

PIR UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15419196094582
p value: 9.02620705183614E-4
refers to: 207469_s_at
refers to: PIR
t statistic: 11.638515920633

206026_s_at
type: EFO_0005072
part of: A-AFFY-44

SDCBP2
type: EnsemblDatabaseReference

CYB5R2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4907150947839
p value: 0.00148692978000705
refers to: 220230_s_at
refers to: CYB5R2
t statistic: -10.1939255067663

CSRP2
type: EnsemblDatabaseReference

TCN1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.09103369124935
p value: 0.00135540672684757
refers to: 205513_at
refers to: TCN1
t statistic: -10.4684071278848

228737_at
type: EFO_0005072
part of: A-AFFY-44

ATRX
type: EnsemblDatabaseReference

CTHRC1
type: EnsemblDatabaseReference

201564_s_at
type: EFO_0005072
part of: A-AFFY-44

PIR
type: EnsemblDatabaseReference

MTL5 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00395720823589
p value: 0.00584769374084492
refers to: 219786_at
refers to: MTL5
t statistic: -6.74102184425156

204720_s_at
type: EFO_0005072
part of: A-AFFY-44

205267_at
type: EFO_0005072
part of: A-AFFY-44

HSPA1A DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0705797226835
p value: 0.0014337335199667
refers to: HSPA1A
refers to: 200799_at
t statistic: -10.2771795465485

NME4
type: EnsemblDatabaseReference

206224_at
type: EFO_0005072
part of: A-AFFY-44

PCSK9 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.19896146463889
p value: 7.74592187321223E-4
refers to: PCSK9
refers to: 227759_at
t statistic: 12.1548877870666

FGL1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -4.28404697081746
p value: 8.45771403018332E-5
refers to: 205305_at
refers to: FGL1
t statistic: -25.1049529751032

HOTAIR
type: EnsemblDatabaseReference

HPGD
type: EnsemblDatabaseReference

ARL4C DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08596579929951
p value: 0.00195958240823683
refers to: ARL4C
refers to: 202207_at
t statistic: -9.324321889177

HEATR3
type: EnsemblDatabaseReference

FAM43A DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00845585927279
p value: 0.00181251103578713
refers to: FAM43A
refers to: 227410_at
t statistic: -9.52003208414652

RAB7B UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03985703510904
p value: 0.00397494913941701
refers to: RAB7B
refers to: 1553982_a_at
t statistic: 7.68408278832772

ORAI2
type: EnsemblDatabaseReference

POU2AF1 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.24338755334816
p value: 7.74592187321223E-4
refers to: POU2AF1
refers to: 205267_at
t statistic: 12.455434461664

ATRX
type: EnsemblDatabaseReference

204607_at
type: EFO_0005072
part of: A-AFFY-44

205513_at
type: EFO_0005072
part of: A-AFFY-44

ARL4C
type: EnsemblDatabaseReference

211980_at
type: EFO_0005072
part of: A-AFFY-44

NOX1 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21283818381606
p value: 0.00247127871367712
refers to: 207217_s_at
refers to: NOX1
t statistic: 8.80483438649589

202859_x_at
type: EFO_0005072
part of: A-AFFY-44

AKAP12 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -3.05256379123348
p value: 1.14932086746525E-4
refers to: 227530_at
refers to: AKAP12
t statistic: -22.9983772572723

200799_at
type: EFO_0005072
part of: A-AFFY-44

PSMD10 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -2.95524471258536
p value: 3.40807204971082E-4
refers to: 1554577_a_at
refers to: PSMD10
t statistic: -15.6055080066266

FBP1
type: EnsemblDatabaseReference

LGALS1
type: EnsemblDatabaseReference

203828_s_at
type: EFO_0005072
part of: A-AFFY-44

206561_s_at
type: EFO_0005072
part of: A-AFFY-44

AADAC
type: EnsemblDatabaseReference

HOTAIR
type: EnsemblDatabaseReference

HPGD
type: EnsemblDatabaseReference

225033_at
type: EFO_0005072
part of: A-AFFY-44

225681_at
type: EFO_0005072
part of: A-AFFY-44

TOX2
type: EnsemblDatabaseReference

FAM169A
type: EnsemblDatabaseReference

ENPP2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.30449986484541
p value: 0.00417686182819475
refers to: ENPP2
refers to: 209392_at
t statistic: -7.54975485032942

CLDN1
type: EnsemblDatabaseReference

LSS
type: EnsemblDatabaseReference

SEMA3A DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22377270468355
p value: 0.00340163283352556
refers to: 206805_at
refers to: SEMA3A
t statistic: -8.0658107462167

ZNF395
type: EnsemblDatabaseReference

FBP1 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03368394271411
p value: 0.00134769872985453
refers to: FBP1
refers to: 209696_at
t statistic: 10.5746346326113

202075_s_at
type: EFO_0005072
part of: A-AFFY-44

TNFRSF11B DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15703021419056
p value: 0.0122882789834233
refers to: 204933_s_at
refers to: TNFRSF11B
t statistic: -5.31911045701936

SERPINI1
type: EnsemblDatabaseReference

208712_at
type: EFO_0005072
part of: A-AFFY-44

Analysis of 'gankyrin shRNA' vs 'control shRNA'
type: MicroarrayDifferentialExpressionAnalysis

FAM169A DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1409885839481
p value: 0.00156205794002941
refers to: FAM169A
refers to: 235048_at
t statistic: -9.99294474922924

SYNGR3
type: EnsemblDatabaseReference

204235_s_at
type: EFO_0005072
part of: A-AFFY-44

FAM13A UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.00833036355558
p value: 0.0314043953577445
refers to: FAM13A
refers to: 1569025_s_at
t statistic: 3.82068474081787

SLCO1B3
type: EnsemblDatabaseReference

FBP1
type: EnsemblDatabaseReference

LRRC19
type: EnsemblDatabaseReference

CLDN1 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.43360505940344
p value: 0.0140014195108543
refers to: CLDN1
refers to: 218182_s_at
t statistic: 5.07593143083792

CXCL2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.26513924326336
p value: 0.00375162702126089
refers to: CXCL2
refers to: 209774_x_at
t statistic: -7.85449733069674

SEMA3A
type: EnsemblDatabaseReference

218806_s_at
type: EFO_0005072
part of: A-AFFY-44

AKR1B10
type: EnsemblDatabaseReference

TM2D2
type: EnsemblDatabaseReference

SEPT6
type: EnsemblDatabaseReference

219869_s_at
type: EFO_0005072
part of: A-AFFY-44

CLDN1
type: EnsemblDatabaseReference

HPGD UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.33260496211537
p value: 0.00175683146396917
refers to: HPGD
refers to: 211549_s_at
t statistic: 9.71274974102064

NRP1
type: EnsemblDatabaseReference

HGD UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14657307685669
p value: 3.91349840387239E-4
refers to: 205221_at
refers to: HGD
t statistic: 15.2354554862643

HMGA2
type: EnsemblDatabaseReference

227410_at
type: EFO_0005072
part of: A-AFFY-44

SERPINI1
type: EnsemblDatabaseReference

AGR3
type: EnsemblDatabaseReference

DHRS2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.94338509000414
p value: 0.00149381453618726
refers to: DHRS2
refers to: 206463_s_at
t statistic: -10.1291776854571

CST1
type: EnsemblDatabaseReference

FGL1
type: EnsemblDatabaseReference

KYNU
type: EnsemblDatabaseReference

CXCL8
type: EnsemblDatabaseReference

CYB5R2
type: EnsemblDatabaseReference

MTUS1
type: EnsemblDatabaseReference

203180_at
type: EFO_0005072
part of: A-AFFY-44

CEACAM5
type: EnsemblDatabaseReference

226104_at
type: EFO_0005072
part of: A-AFFY-44

205290_s_at
type: EFO_0005072
part of: A-AFFY-44

FANCD2 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03240274562409
p value: 0.0025399083587885
refers to: FANCD2
refers to: 223545_at
t statistic: 8.73336403772308

RGCC
type: EnsemblDatabaseReference

SMOC2
type: EnsemblDatabaseReference

205311_at
type: EFO_0005072
part of: A-AFFY-44

IRS2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.27083816401517
p value: 0.00158939849702159
refers to: 209185_s_at
refers to: IRS2
t statistic: -9.94970501597572

205608_s_at
type: EFO_0005072
part of: A-AFFY-44

CBX5
type: EnsemblDatabaseReference

FRMD5
type: EnsemblDatabaseReference

202073_at
type: EFO_0005072
part of: A-AFFY-44

DHRS9
type: EnsemblDatabaseReference

HMGCS2 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.25649663785998
p value: 5.60932334502525E-4
refers to: HMGCS2
refers to: 204607_at
t statistic: 13.6757322178695

231862_at
type: EFO_0005072
part of: A-AFFY-44

RAB7B
type: EnsemblDatabaseReference

SEMA3A DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12914416903107
p value: 0.0254798823793338
refers to: 244163_at
refers to: SEMA3A
t statistic: -4.09501538131337

BICD1
type: EnsemblDatabaseReference

APCDD1L-AS1
type: EnsemblDatabaseReference

PROX1
type: EnsemblDatabaseReference

FSCN1
type: EnsemblDatabaseReference

CD200 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.16738067589857
p value: 0.0122882789834233
refers to: CD200
refers to: 209583_s_at
t statistic: 5.31839592852069

PDE9A
type: EnsemblDatabaseReference

ARHGAP6
type: EnsemblDatabaseReference

MXRA7
type: EnsemblDatabaseReference

SUCNR1
type: EnsemblDatabaseReference

ZNF252P UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04793171818718
p value: 0.0309642225213848
refers to: 1558722_at
refers to: ZNF252P
t statistic: 3.83976090187415

CYB5R2
type: EnsemblDatabaseReference

220230_s_at
type: EFO_0005072
part of: A-AFFY-44

(Factor value) RNA_INTERFERENCE/control shRNA
type: EFO_0000001
property type: RNA_INTERFERENCE
property value: control shRNA

220376_at
type: EFO_0005072
part of: A-AFFY-44

CCND1
type: EnsemblDatabaseReference

FAM43A
type: EnsemblDatabaseReference

209774_x_at
type: EFO_0005072
part of: A-AFFY-44

HMGA2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13815120503307
p value: 0.00790156112156202
refers to: HMGA2
refers to: 1558682_at
t statistic: -6.0865795517071

COL4A1
type: EnsemblDatabaseReference

205221_at
type: EFO_0005072
part of: A-AFFY-44

LCN2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.52390704539616
p value: 0.00580903595932164
refers to: 212531_at
refers to: LCN2
t statistic: -6.78603656648973

ANXA13
type: EnsemblDatabaseReference

CCL22
type: EnsemblDatabaseReference

DOCK5
type: EnsemblDatabaseReference

229613_at
type: EFO_0005072
part of: A-AFFY-44

DHRS9
type: EnsemblDatabaseReference

(Sample) organism/Homo sapiens
type: Homo sapiens
property type: organism
property value: Homo sapiens

229414_at
type: EFO_0005072
part of: A-AFFY-44

AKAP12
type: EnsemblDatabaseReference

HMGCS2
type: EnsemblDatabaseReference

CDKN1C
type: EnsemblDatabaseReference

PI3
type: EnsemblDatabaseReference

FAM134B UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.42975680459767
p value: 7.74592187321223E-4
refers to: FAM134B
refers to: 218532_s_at
t statistic: 12.2312804798488

209267_s_at
type: EFO_0005072
part of: A-AFFY-44

BICD1
type: EnsemblDatabaseReference

VCAN
type: EnsemblDatabaseReference

TNFAIP6 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.68012664001064
p value: 0.00869717896074942
refers to: TNFAIP6
refers to: 206026_s_at
t statistic: 5.92498626585728

1568817_at
type: EFO_0005072
part of: A-AFFY-44

FANCD2
type: EnsemblDatabaseReference

LCN2
type: EnsemblDatabaseReference

218532_s_at
type: EFO_0005072
part of: A-AFFY-44

212414_s_at
type: EFO_0005072
part of: A-AFFY-44

CST1 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.18224056552979
p value: 6.53680030600502E-4
refers to: CST1
refers to: 206224_at
t statistic: 13.2077819912672

207861_at
type: EFO_0005072
part of: A-AFFY-44

CEACAM5 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14014833473585
p value: 0.0015289649143584
refers to: 201884_at
refers to: CEACAM5
t statistic: -10.0324912144722

ST3GAL1
type: EnsemblDatabaseReference

SMOC2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.90488222364504
p value: 1.17243598205021E-4
refers to: SMOC2
refers to: 223235_s_at
t statistic: -22.2720986286603

226364_at
type: EFO_0005072
part of: A-AFFY-44

BMP2
type: EnsemblDatabaseReference

207401_at
type: EFO_0005072
part of: A-AFFY-44

228340_at
type: EFO_0005072
part of: A-AFFY-44

SERPINE2
type: EnsemblDatabaseReference

HIP1
type: EnsemblDatabaseReference

PLTP
type: EnsemblDatabaseReference

AHNAK2
type: EnsemblDatabaseReference

TNFRSF10D
type: EnsemblDatabaseReference

PCSK9
type: EnsemblDatabaseReference

FSCN1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12459216697241
p value: 0.0108973655191244
refers to: FSCN1
refers to: 210933_s_at
t statistic: -5.53236801904335

CDC45
type: EnsemblDatabaseReference

VAV3 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 2.01086155496545
p value: 0.00837527620999942
refers to: 224221_s_at
refers to: VAV3
t statistic: 5.9890777612101

206805_at
type: EFO_0005072
part of: A-AFFY-44

SOCS2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22718146954089
p value: 0.00353107329075697
refers to: SOCS2
refers to: 203373_at
t statistic: -7.97728990690742

SLC23A1
type: EnsemblDatabaseReference

FAM169A DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15199760264393
p value: 0.00568608122426295
refers to: FAM169A
refers to: 213954_at
t statistic: -6.85384302584037

MREG
type: EnsemblDatabaseReference

HMGCS2
type: EnsemblDatabaseReference

235048_at
type: EFO_0005072
part of: A-AFFY-44

238649_at
type: EFO_0005072
part of: A-AFFY-44

231120_x_at
type: EFO_0005072
part of: A-AFFY-44

POU2AF1
type: EnsemblDatabaseReference

223235_s_at
type: EFO_0005072
part of: A-AFFY-44

HPGD UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4965937348087
p value: 4.16564919861326E-4
refers to: 211548_s_at
refers to: HPGD
t statistic: 14.7253978020374

FERMT2 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.33024388702474
p value: 5.60932334502525E-4
refers to: 209210_s_at
refers to: FERMT2
t statistic: 13.7855925045119

BICD1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04097501004153
p value: 0.00327766185102758
refers to: 231964_at
refers to: BICD1
t statistic: -8.17325057680457

205680_at
type: EFO_0005072
part of: A-AFFY-44

EMP1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.27807852465576
p value: 0.00247127871367712
refers to: EMP1
refers to: 201324_at
t statistic: -8.78937462343303

1569454_a_at
type: EFO_0005072
part of: A-AFFY-44

ASB9
type: EnsemblDatabaseReference

RP11-669N7.2
type: EnsemblDatabaseReference

SERPINE2
type: EnsemblDatabaseReference

SOCS2
type: EnsemblDatabaseReference

MAN1A1
type: EnsemblDatabaseReference

213796_at
type: EFO_0005072
part of: A-AFFY-44

TLE3
type: EnsemblDatabaseReference

IKBIP
type: EnsemblDatabaseReference

SPP1
type: EnsemblDatabaseReference

PITPNC1
type: EnsemblDatabaseReference

SPRR1A DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03424427965822
p value: 0.00569917208715146
refers to: 213796_at
refers to: SPRR1A
t statistic: -6.82176357859377

MATN2
type: EnsemblDatabaseReference

OPTN DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08695812720667
p value: 0.0019834292330336
refers to: OPTN
refers to: 202073_at
t statistic: -9.26991959118719

219631_at
type: EFO_0005072
part of: A-AFFY-44

(Sample) genotype/knockdown of Gankyrin
type: EFO_0000001
property type: genotype
property value: knockdown of Gankyrin

214308_s_at
type: EFO_0005072
part of: A-AFFY-44

239153_at
type: EFO_0005072
part of: A-AFFY-44

DNAJC6 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14344428019894
p value: 7.2186577419853E-4
refers to: DNAJC6
refers to: 204720_s_at
t statistic: -12.8774982504606

210517_s_at
type: EFO_0005072
part of: A-AFFY-44

227530_at
type: EFO_0005072
part of: A-AFFY-44

HGD UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.23688320308827
p value: 7.74592187321223E-4
refers to: HGD
refers to: 214307_at
t statistic: 12.5721423672233

223939_at
type: EFO_0005072
part of: A-AFFY-44

201324_at
type: EFO_0005072
part of: A-AFFY-44

(Sample) organism part/colon
type: UBERON_0001155
property type: organism part
property value: colon

NTSR1
type: EnsemblDatabaseReference

PKIB
type: EnsemblDatabaseReference

212739_s_at
type: EFO_0005072
part of: A-AFFY-44

TNFRSF11B
type: EnsemblDatabaseReference

ACOT4 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -2.57560092465276
p value: 5.60932334502525E-4
refers to: ACOT4
refers to: 229534_at
t statistic: -13.698010221817

HSPA1A
type: EnsemblDatabaseReference

PSMD10
type: EnsemblDatabaseReference

209583_s_at
type: EFO_0005072
part of: A-AFFY-44

1553982_a_at
type: EFO_0005072
part of: A-AFFY-44

BMP2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22029353301043
p value: 0.00882165466707949
refers to: BMP2
refers to: 205290_s_at
t statistic: -5.90309602984855

SOCS2
type: EnsemblDatabaseReference

CCL20
type: EnsemblDatabaseReference

IKBIP
type: EnsemblDatabaseReference

201884_at
type: EFO_0005072
part of: A-AFFY-44

229376_at
type: EFO_0005072
part of: A-AFFY-44

231033_at
type: EFO_0005072
part of: A-AFFY-44

CDKN1C DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.29326634822543
p value: 0.0101471073596306
refers to: CDKN1C
refers to: 213348_at
t statistic: -5.64776665540133

MTL5
type: EnsemblDatabaseReference

STEAP4
type: EnsemblDatabaseReference

201325_s_at
type: EFO_0005072
part of: A-AFFY-44

CD200
type: EnsemblDatabaseReference

CDC45 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03465874347015
p value: 0.00114281211117939
refers to: CDC45
refers to: 204126_s_at
t statistic: 10.9013439253413

218963_s_at
type: EFO_0005072
part of: A-AFFY-44

VAV3
type: EnsemblDatabaseReference

CREB3L2
type: EnsemblDatabaseReference

CSRP2 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.34073149071215
p value: 0.00245280168483122
refers to: CSRP2
refers to: 207030_s_at
t statistic: -8.84357822216283

244779_at
type: EFO_0005072
part of: A-AFFY-44

227345_at
type: EFO_0005072
part of: A-AFFY-44

PITPNC1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.56583776086511
p value: 7.74592187321223E-4
refers to: 229414_at
refers to: PITPNC1
t statistic: -12.45568189221

ANGPT1
type: EnsemblDatabaseReference

PLTP DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -2.31496368152076
p value: 6.49248770336754E-4
refers to: PLTP
refers to: 202075_s_at
t statistic: -13.2602294294933

218182_s_at
type: EFO_0005072
part of: A-AFFY-44

211548_s_at
type: EFO_0005072
part of: A-AFFY-44

OPTN DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.40671192174265
p value: 0.00402169234002909
refers to: OPTN
refers to: 202074_s_at
t statistic: -7.64398286930401

SAV1
type: EnsemblDatabaseReference

NOX1
type: EnsemblDatabaseReference

VSIG1
type: EnsemblDatabaseReference

DHRS2
type: EnsemblDatabaseReference

CTHRC1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.40692618285655
p value: 4.16564919861326E-4
refers to: CTHRC1
refers to: 225681_at
t statistic: -14.6959080402493

MATN2 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.49683449250909
p value: 3.14602937703718E-4
refers to: MATN2
refers to: 202350_s_at
t statistic: 15.977544320704

204620_s_at
type: EFO_0005072
part of: A-AFFY-44

PKIB
type: EnsemblDatabaseReference

224413_s_at
type: EFO_0005072
part of: A-AFFY-44

227759_at
type: EFO_0005072
part of: A-AFFY-44

TRIM36
type: EnsemblDatabaseReference

TNFRSF11B
type: EnsemblDatabaseReference

PPAPDC1B
type: EnsemblDatabaseReference

203913_s_at
type: EFO_0005072
part of: A-AFFY-44

NEB
type: EnsemblDatabaseReference

204470_at
type: EFO_0005072
part of: A-AFFY-44

FRY
type: EnsemblDatabaseReference

PSMD10 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -3.74115886241278
p value: 5.98292625482449E-6
refers to: 219485_s_at
refers to: PSMD10
t statistic: -40.6672602155405

MTUS1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.40049114608193
p value: 0.0025399083587885
refers to: 239576_at
refers to: MTUS1
t statistic: -8.72826602054697

SOCS3 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.41954617982439
p value: 0.00263249218913498
refers to: SOCS3
refers to: 227697_at
t statistic: -8.62197318490422

DUSP4 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16857391429303
p value: 0.00594268760792998
refers to: DUSP4
refers to: 226034_at
t statistic: -6.68398453666455

KLK10
type: EnsemblDatabaseReference

226384_at
type: EFO_0005072
part of: A-AFFY-44

RP11-669N7.2 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09496676270068
p value: 0.00247127871367712
refers to: RP11-669N7.2
refers to: 1561757_a_at
t statistic: 8.79843998779224

CCND1 DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.09306766602351
p value: 0.00138334789086138
refers to: CCND1
refers to: 208712_at
t statistic: -10.4001744170985

A-AFFY-44
type: EFO_0000269

223732_at
type: EFO_0005072
part of: A-AFFY-44

200839_s_at
type: EFO_0005072
part of: A-AFFY-44

Homo sapiens
type: OBI_0100026

(Sample) cell line/SW480
type: EFO_0002083
property type: cell line
property value: SW480

210510_s_at
type: EFO_0005072
part of: A-AFFY-44

211549_s_at
type: EFO_0005072
part of: A-AFFY-44

VAV3
type: EnsemblDatabaseReference

RP11-401P9.4
type: EnsemblDatabaseReference

PPAPDC1B DOWN in 'gankyrin shRNA' vs 'control shRNA'
type: DecreasedDifferentialExpressionRatio
fold change: -1.07572536973242
p value: 0.00135540672684757
refers to: PPAPDC1B
refers to: 226384_at
t statistic: -10.4911438105766

LRP12
type: EnsemblDatabaseReference

SAV1
type: EnsemblDatabaseReference

LRRC19 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21812981452449
p value: 9.02620705183614E-4
refers to: LRRC19
refers to: 220376_at
t statistic: 11.5997945808086

FERMT2 UP in 'gankyrin shRNA' vs 'control shRNA'
type: IncreasedDifferentialExpressionRatio
fold change: 1.00901178106071
p value: 0.00446530567173248
refers to: FERMT2
refers to: 214212_x_at
t statistic: 7.41861137350589

238755_at
type: EFO_0005072
part of: A-AFFY-44

212531_at
type: EFO_0005072
part of: A-AFFY-44