AERO1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G50830 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G03980 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT2G47780 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G30760 UP in 'top1a-2 mutant' vs 'wild type genotype'
PER65 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AtRABA1i DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G11930 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G23770 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G65370 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G29070 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PLDALPHA2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G79910 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G12070 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
XRI UP in 'top1a-2 mutant' vs 'wild type genotype'
IQD19 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CML25 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G55870 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G28790 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATEXO70C1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G43120 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G12410 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATCSLD1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
COPT3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G59480 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATPIPK11 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G01310 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G23900 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G01490 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G50610 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G42725 UP in 'top1a-2 mutant' vs 'wild type genotype'
HSPRO2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
UNE15 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SDT DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATLP-3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SOT17 UP in 'top1a-2 mutant' vs 'wild type genotype'
GDH3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G26490 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
DES-1-LIKE DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G24000 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G44224 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SGP2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
MEE47 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
BHLH51 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G04010 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G62710 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G02250 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AtGH9A4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ABCG17 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
RIC1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ASK2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
XIE DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CPK24 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G48460 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PER39 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT2G24370 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G79780 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ADS3.2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G26830 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATRBL5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATMGH3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G10260 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G48210 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G17540 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYP705A24 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G20120 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G19010 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AOX1B DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G11740 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
Sadhu4-2 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G26610 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G01270 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G03620 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
sks13 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
APT2 UP in 'top1a-2 mutant' vs 'wild type genotype'
CORI3 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT2G33420 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G64790 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G43630 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G45160 UP in 'top1a-2 mutant' vs 'wild type genotype'
ATEXPB5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G62820 UP in 'top1a-2 mutant' vs 'wild type genotype'
PUB15 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
REN1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATHCHIB UP in 'top1a-2 mutant' vs 'wild type genotype'
CYP86C4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATCHX8 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G18570 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AKT5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G22750 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
sks14 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G72960 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G11190 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G18280 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G30650 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G39110 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
GGPS2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SS3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
T5P19_250 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
F6'H1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G78460 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
TIP5;1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATSFL61 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G74390 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G01640 UP in 'top1a-2 mutant' vs 'wild type genotype'
COBL10 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G36600 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATSTP6 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
HMGB15 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G35110 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
KCS15 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G30670 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G22180 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G54800 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATTPS8 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G16750 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYP98A8 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G10470 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G23570 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
LAP3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G33850 UP in 'top1a-2 mutant' vs 'wild type genotype'
MEE48 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G70720 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SAG21 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G38500 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
TPS14 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AHP2 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT2G41970 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
LACS5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G65205 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PLT3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G16500 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
sks11 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT59 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CDEF1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G08670 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G21140 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AGC1.7 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AST68 UP in 'top1a-2 mutant' vs 'wild type genotype'
RPA DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATCSLD4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SHN1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G15280 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ACT12 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G05450 UP in 'top1a-2 mutant' vs 'wild type genotype'
ATBCAT-1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
LCR72 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PAB7 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G66850 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G23690 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATOEP16-2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CML28 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G68110 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
VGDH2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATNAC2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
MAPKKK20 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G16960 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G46940 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G15140 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G27180 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
HVA22J DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G15650 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G76370 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G25040 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G02140 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G46750 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ANX1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SYP124 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AGP23 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYP72A11 UP in 'top1a-2 mutant' vs 'wild type genotype'
AtVEX1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
RGF8 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
QRT3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G52130 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATSFH12 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G52620 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATG8H DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CML42 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G42850 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G23520 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
MS2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G44260 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
TIF3C2 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G01780 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G04760 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATPAP21 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
GRXS13 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G02720 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SCPL7 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT4G19130 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G60240 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G13230 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G11690 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
NAP DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ANNAT1 UP in 'top1a-2 mutant' vs 'wild type genotype'
CYP86C3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PGA4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G55180 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G53080 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
MLO5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
RALFL26 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G33690 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G39130 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
VATG3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G19000 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G75920 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATMES10 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT4G29980 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G37750 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G41230 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G60610 UP in 'top1a-2 mutant' vs 'wild type genotype'
IRX12 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G12080 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5MAT DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G26110 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
TCP4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
LEA DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G07850 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATPEN3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATBRCA1 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G57620 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
R1 UP in 'top1a-2 mutant' vs 'wild type genotype'
ATENT7 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
DREB2F UP in 'top1a-2 mutant' vs 'wild type genotype'
AT2G29790 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ALA6 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
APPB1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G54860 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
JR1 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G62640 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G39610 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G68875 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PXG7 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ABCG9 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
FLA14 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G18720 UP in 'top1a-2 mutant' vs 'wild type genotype'
MLP168 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G07840 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G66210 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
KCS12 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ACOS5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
TSO2 UP in 'top1a-2 mutant' vs 'wild type genotype'
RGP3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
HMA2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G07820 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CPK26 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
HAT9 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SCAMP2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G14060 UP in 'top1a-2 mutant' vs 'wild type genotype'
CYP81D1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATPSK2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATCHX19 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
IAA19 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G18990 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AHA9 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
anac025 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G30450 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G03710 UP in 'top1a-2 mutant' vs 'wild type genotype'
ATA7 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
TRFL10 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G02810 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G30020 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ALDH2B7 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
RPS15F DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G20190 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G10440 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G18560 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G23590 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G01980 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SWEET3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G32780 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G04390 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G02660 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATINT4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G20320 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
GAE2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G17483 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AHA6 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G08670 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT4G20420 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G31750 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ACA9 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
DD46 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G53830 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G19400 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G13130 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G07830 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYP83A1 UP in 'top1a-2 mutant' vs 'wild type genotype'
GAMMA-TIP3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
BCP1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G22950 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G14780 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
HMT3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SYP72 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G04360 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATA27 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ACC2 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT2G32190 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
BGAL13 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G61860 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G10080 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G60780 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G61720 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G19380 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G62230 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ARR7 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT4G22790 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G65490 UP in 'top1a-2 mutant' vs 'wild type genotype'
GASA11 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
B3GALT8 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
NF-YB7 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G29250 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G20530 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
TET11 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PME21 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G23250 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PER49 UP in 'top1a-2 mutant' vs 'wild type genotype'
ATBCA3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G52680 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATPPC4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G25240 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
WUS DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G31710 UP in 'top1a-2 mutant' vs 'wild type genotype'
AEE9 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AtPPa3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
GLP8 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AGL104 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G46210 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G47280 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
WRKY60 UP in 'top1a-2 mutant' vs 'wild type genotype'
PME23 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ADF11 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATERDJ3A DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CIPK12 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G53210 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G61590 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G09380 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G28780 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G38905 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G23000 UP in 'top1a-2 mutant' vs 'wild type genotype'
XIC DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PRF5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G54070 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PERK6 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G25340 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G03390 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATGSTF11 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G51070 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G29140 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G30350 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ENODL7 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PAB5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G16290 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATST2A DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYP708A3 UP in 'top1a-2 mutant' vs 'wild type genotype'
SWEET14 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATGPAT5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G10460 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PAB3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G35670 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
VHA-E2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATCP1 UP in 'top1a-2 mutant' vs 'wild type genotype'
LHT2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G05150 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
GLN1;5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G51000 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G30795 UP in 'top1a-2 mutant' vs 'wild type genotype'
scpl38 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G47340 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
Iqd4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
BGLU36 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G13350 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G27790 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G24190 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SRF4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G76470 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
KCS7 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AtUGT85A3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G08250 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G72430 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G49290 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G41800 UP in 'top1a-2 mutant' vs 'wild type genotype'
LHT7 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ACA13 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G15720 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G64610 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PRF4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATPMEI2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ASN1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
IPMI1 UP in 'top1a-2 mutant' vs 'wild type genotype'
EXL4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G28750 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G17340 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SWEET7 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CPK14 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
HKL3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G21010 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G30710 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G19500 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G06990 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G06260 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ARAC7 UP in 'top1a-2 mutant' vs 'wild type genotype'
ArRABA1h DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G23350 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G54870 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G14815 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G27450 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
RALFL17 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G42470 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATSTP9 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G21640 UP in 'top1a-2 mutant' vs 'wild type genotype'
LTP12 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G09930 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G57810 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G25780 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATROPGEF12 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AAE11 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYP704B1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
APA3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATMGT5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G62180 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SYP131 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G35700 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G27400 UP in 'top1a-2 mutant' vs 'wild type genotype'
RALFL25 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
UGT75C1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATNAC3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SUFE2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G27580 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATCHX15 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATTSM1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
MYB101 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
WBC27 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G16760 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATACA5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATA1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G23560 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CML17 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AtPPT1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
INVH DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G16040 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
(Factor value) GENOTYPE/wild type genotype
AT4G18920 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G47980 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G23840 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G62760 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G23600 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATBOR4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PER41 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATPAP25 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G20135 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G26390 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G53980 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G50570 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G16760 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PME43 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
UKL5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
MTPC3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
EXL6 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
MAN3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
IDH-III DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATTSPO DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SEC14 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
HHP2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
Analysis of 'top1a-2 mutant' vs 'wild type genotype'
ATPME2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G32280 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G18360 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
TPS10 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G12000 UP in 'top1a-2 mutant' vs 'wild type genotype'
CML21 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYC1 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT5G44300 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ENODL6 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATCSLC12 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AGL66 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G33811 UP in 'top1a-2 mutant' vs 'wild type genotype'
RD26 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
COBL6 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G19980 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G64300 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CRRSP24 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G64800 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G38760 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G39980 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
BGAL11 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G37980 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
QQS UP in 'top1a-2 mutant' vs 'wild type genotype'
A9 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SHT DOWN in 'top1a-2 mutant' vs 'wild type genotype'
HMA4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G03050 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G20450 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G03850 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
sks10 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G47050 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
POX2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G17845 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G18340 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
LCR10 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATPAP14 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
sks12 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PIP5K5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G54870 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYP71B34 UP in 'top1a-2 mutant' vs 'wild type genotype'
AtTLP8 UP in 'top1a-2 mutant' vs 'wild type genotype'
AGD13 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G28375 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
LAP6 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AMT1;4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G43230 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G26320 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PIRL6 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G24600 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G28830 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G48770 UP in 'top1a-2 mutant' vs 'wild type genotype'
APUM7 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G01250 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G54095 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G63060 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G08310 UP in 'top1a-2 mutant' vs 'wild type genotype'
PME67 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
COR47 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
VSR2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
MIOX4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
LCR5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G41040 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G18280 UP in 'top1a-2 mutant' vs 'wild type genotype'
ALIS4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G01700 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G21990 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
FSD1 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT4G39670 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
APP UP in 'top1a-2 mutant' vs 'wild type genotype'
CML23 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G19310 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
BLH4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AAT1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G40990 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYP703A2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AGP40 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G23720 UP in 'top1a-2 mutant' vs 'wild type genotype'
ATSTP2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ASD1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PME20 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PHT6 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CRRSP26 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
LAP5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
B5 #1 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G21570 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PER28 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT2G37900 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT4G29700 UP in 'top1a-2 mutant' vs 'wild type genotype'
ATROPGEF11 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G17980 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
STR16 UP in 'top1a-2 mutant' vs 'wild type genotype'
PEX2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CXE9 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G30630 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G10970 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
scpl31 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G80160 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G11770 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G52460 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G35490 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
TMT3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATL78 UP in 'top1a-2 mutant' vs 'wild type genotype'
ATPMEPCRB UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G04700 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G05290 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
LLG3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AGP11 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
BHLH75 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G18220 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYP710A2 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT4G20460 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
atnudt21 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G74010 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G24970 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G05577 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
HIPP20 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G04670 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATEXO70C2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ARR16 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G10770 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PAL4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
DNA topoisomerases release supercoils in DNA introduced during replication or transcription. How DNA topoisomerases impact transcription in the context of eukaryotic chromatin is poorly understood. In this study, using a floral stem cell model in Arabidopsis, we uncovered a role of TOP1a in Polycomb Group (PcG) protein-mediated histone lysine 27 trimethylation at, and transcriptional repression of, the stem cell maintenance gene WUSCHEL (WUS). The strong genetic interactions between a TOP1a mutant and mutations in PcG genes and the overwhelming enrichment of PcG targets among genes affected in expression in the TOP1a mutant revealed a role of TOP1a in PcG-mediated regulation. Intriguingly, not only the repression of some PcG target genes but also the expression of others requires TOP1a. The mechanism that unifies the opposing effects of TOP1a on PcG target genes appears to lie in its role in decreasing nucleosome density. Genome-wide nucleosome mapping shows that TOP1a is required for the depletion of nucleosomes at regulatory regions of genes, which probably allows the binding of factors that either recruit PcG, as we show for AGAMOUS at the WUS locus, or counteract PcG-mediated regulation. This study uncovers a strong and previously unknown connection between TOP1a and PcG. 6 samples from wild-type and TOP1a-2 inflorescences, including three biological replicates per genotype.
AT2G03740 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G00350 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G01430 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
TGA9 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ADF7 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
WRKY12 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G01620 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G18180 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G13380 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G54020 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT2G04020 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ZCW32 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G75870 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AtCYS2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G28680 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G42940 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
GRP19 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PERK4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G73610 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYP76C1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G38950 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ISU2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AHA8 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G67290 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SPIK DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G61230 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PCR11 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G23670 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ARGOS DOWN in 'top1a-2 mutant' vs 'wild type genotype'
MYB108 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AtGH9B11 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATEXPA20 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G04470 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
BCAT4 UP in 'top1a-2 mutant' vs 'wild type genotype'
RALFL4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G26860 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYP76C3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
JMT DOWN in 'top1a-2 mutant' vs 'wild type genotype'
FLA3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G51410 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PDR3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G09550 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
GRXC14 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT5G03250 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AtPP2-B15 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G06250 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G70790 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G24380 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SDP1-LIKE DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATEXO70H3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SYP125 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYP86C2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G37900 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATCNGC8 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G60540 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G03200 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
FMO GS-OX3 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT2G25890 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
DRL1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
KCS17 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
SNAP30 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CPK16 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G13175 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT4G34750 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
sks18 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AP3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CSY5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AtcwINV2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G62450 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATBCB DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G45800 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G22550 UP in 'top1a-2 mutant' vs 'wild type genotype'
GASA9 UP in 'top1a-2 mutant' vs 'wild type genotype'
PME13 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G38240 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PME50 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G28840 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CML6 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
GRF12 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G03080 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
WRKY57 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G04620 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
PAP6 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G04540 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
GATL4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
BAM1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CYP98A9 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
JAL23 UP in 'top1a-2 mutant' vs 'wild type genotype'
AtGDU4 UP in 'top1a-2 mutant' vs 'wild type genotype'
FMA UP in 'top1a-2 mutant' vs 'wild type genotype'
ATA20 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AGT3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
TRFL2 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G03820 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G71680 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
IPMI2 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G27030 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G13970 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
RIP4 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
IAA6 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
anac103 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G28980 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G26850 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G57550 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G07800 UP in 'top1a-2 mutant' vs 'wild type genotype'
MYB28 UP in 'top1a-2 mutant' vs 'wild type genotype'
XTH32 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT4G18540 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT1G52000 UP in 'top1a-2 mutant' vs 'wild type genotype'
AT3G19090 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
MEE23 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
EXL1 UP in 'top1a-2 mutant' vs 'wild type genotype'
BIP3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
CALS5 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT2G04675 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G07500 UP in 'top1a-2 mutant' vs 'wild type genotype'
ATPRK2A DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT1G26710 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
UPB1 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
BHLH89 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
EDA24 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT3G01240 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
ATCKX1 UP in 'top1a-2 mutant' vs 'wild type genotype'
XTH3 DOWN in 'top1a-2 mutant' vs 'wild type genotype'
AT4G18395 DOWN in 'top1a-2 mutant' vs 'wild type genotype'