RGD1305464
type: EnsemblDatabaseReference

1370359_at
type: EFO_0005072
part of: A-AFFY-25

(Assay) pancreas, ethanol diet, replicate 3
type: Assay
identifier: pancreas, ethanol diet, replicate 3
has participant: A-AFFY-25

LOC286960 UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.31962873405867
p value: 0.00962706910641328
refers to: 1371092_at
refers to: LOC286960
t statistic: 5.39628232630367

Hsph1 UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09767773396931
p value: 0.0074116852167199
refers to: 1388898_at
refers to: Hsph1
t statistic: 5.84325813835999

Hspa1a UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.65823127037038
p value: 0.0140807030467512
refers to: 1368247_at
refers to: Hspa1a
t statistic: 4.8682664751099

Hspb1
type: EnsemblDatabaseReference

Reg3b
type: EnsemblDatabaseReference

Pim3 UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.64339914240888
p value: 0.00154950142088894
refers to: Pim3
refers to: 1367725_at
t statistic: 9.93784452027313

Jun
type: EnsemblDatabaseReference

(Assay) pancreas, control diet, replicate 1
type: Assay
identifier: pancreas, control diet, replicate 1
has participant: A-AFFY-25

1389528_s_at
type: EFO_0005072
part of: A-AFFY-25

Hsp90aa1 UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.35445465597231
p value: 0.00612875312873435
refers to: Hsp90aa1
refers to: 1388850_at
t statistic: 6.167794523505

Nudt4 UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.47469940627657
p value: 9.11474227237671E-4
refers to: Nudt4
refers to: 1370180_at
t statistic: 11.8853994199236

Reg3b
type: EnsemblDatabaseReference

Gnpnat1
type: EnsemblDatabaseReference

E-GEOD-3311
type: microarray 1colour mrna differential
RO_0002162: Rattus norvegicus
description: Male Wistar rats weighing 90-120 g were acclimatized for one week and fed standard laboratory chow, at which time the animals were divided into two groups. Animals were then pair-fed for 8 weeks a regular laboratory chow and water ÃÂ¢ÃÂÃÂad libitumÃÂ¢ÃÂÃÂ or Lieber-DeCarli diet (36% calories from ethanol). Control animals received the iso-caloric amount of dextrose to replace ethanol. After 8 weeks of differential feeding rats were euthanized, the pancreas immediately dissected and stored at -80?C until RNA isolation. RNA expression was analyzed using Affymetrix RAE230A gene chips Experiment Overall Design: pancreas from 3 rats feed control diets and 3 rats feed ethanol diets were analyzed
uses data from: http://identifiers.org/pubmed/16804415

Gnpnat1
type: EnsemblDatabaseReference

Amy1a DOWN in 'ethanol-containing diet' vs 'control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.20376988508812
p value: 0.00368243655033921
refers to: Amy1a
refers to: 1370359_at
t statistic: -7.6094218151768

Amy1a
type: EnsemblDatabaseReference

Reg3b DOWN in 'ethanol-containing diet' vs 'control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.49998869584183
p value: 0.0171820667777442
refers to: Reg3b
refers to: 1368238_at
t statistic: -4.47857906106279

Lbh DOWN in 'ethanol-containing diet' vs 'control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.37440482450101
p value: 4.9707426324488E-4
refers to: 1388447_at
refers to: Lbh
t statistic: -13.280678318612

Btg2 UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.17226437285757
p value: 0.00898656931872557
refers to: 1386995_at
refers to: Btg2
t statistic: 5.55213987884969

(Sample) organism part/pancreas
type: UBERON_0001264
property type: organism part
property value: pancreas

Amy1a
type: EnsemblDatabaseReference

LOC286960
type: EnsemblDatabaseReference

(Assay) pancreas, control diet, replicate 3
type: Assay
identifier: pancreas, control diet, replicate 3
has participant: A-AFFY-25

(Factor value) DIET/ethanol-containing diet
type: EFO_0000001
property type: DIET
property value: ethanol-containing diet

1388850_at
type: EFO_0005072
part of: A-AFFY-25

Hsph1
type: EnsemblDatabaseReference

Hspb1 UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.12661466884255
p value: 0.014997353313504
refers to: Hspb1
refers to: 1367577_at
t statistic: 4.74140947329165

1386995_at
type: EFO_0005072
part of: A-AFFY-25

Reg1a DOWN in 'ethanol-containing diet' vs 'control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.83003194238497
p value: 0.0319904427166201
refers to: Reg1a
refers to: 1368629_at
t statistic: -3.68697618950251

Hsp90aa1
type: EnsemblDatabaseReference

(Factor value) DIET/control
type: EFO_0001461
property type: DIET
property value: control

1388447_at
type: EFO_0005072
part of: A-AFFY-25

(Assay) pancreas, ethanol diet, replicate 2
type: Assay
identifier: pancreas, ethanol diet, replicate 2
has participant: A-AFFY-25

Ddit4
type: EnsemblDatabaseReference

Hsp90aa1
type: EnsemblDatabaseReference

(Assay) pancreas, control diet, replicate 2
type: Assay
identifier: pancreas, control diet, replicate 2
has participant: A-AFFY-25

LOC100134871
type: EnsemblDatabaseReference

1386994_at
type: EFO_0005072
part of: A-AFFY-25

Pim3
type: EnsemblDatabaseReference

1390249_at
type: EFO_0005072
part of: A-AFFY-25

Nudt4
type: EnsemblDatabaseReference

Dnajb9
type: EnsemblDatabaseReference

1388898_at
type: EFO_0005072
part of: A-AFFY-25

1367577_at
type: EFO_0005072
part of: A-AFFY-25

Btg2
type: EnsemblDatabaseReference

LOC684828 DOWN in 'ethanol-containing diet' vs 'control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.53367090790356
p value: 0.014997353313504
refers to: 1371332_at
refers to: LOC684828
t statistic: -4.72601878886682

Jun UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 2.13671826908892
p value: 0.0167377161723443
refers to: Jun
refers to: 1389528_s_at
t statistic: 4.54511806904267

(Sample) sex/male
type: EFO_0001266
property type: sex
property value: male

Lbh
type: EnsemblDatabaseReference

1368238_at
type: EFO_0005072
part of: A-AFFY-25

Hsph1
type: EnsemblDatabaseReference

(Sample) organism/Rattus norvegicus
type: Rattus norvegicus
property type: organism
property value: Rattus norvegicus

1370180_at
type: EFO_0005072
part of: A-AFFY-25

Atf3 UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.91784330726163
p value: 0.0219830639169726
refers to: Atf3
refers to: 1369268_at
t statistic: 4.17399663547952

Reg3a DOWN in 'ethanol-containing diet' vs 'control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.74628015729954
p value: 0.00557731960991205
refers to: 1387930_at
refers to: Reg3a
t statistic: -6.64340995906735

LOC684828
type: EnsemblDatabaseReference

1387874_at
type: EFO_0005072
part of: A-AFFY-25

1368025_at
type: EFO_0005072
part of: A-AFFY-25

Atf3
type: EnsemblDatabaseReference

RGD1305464 UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.77169414368294
p value: 0.00595459519694608
refers to: 1390249_at
refers to: RGD1305464
t statistic: 6.37668906822914

Ddit4
type: EnsemblDatabaseReference

(Sample) strain/Wistar
type: EFO_0001342
property type: strain
property value: Wistar

1368629_at
type: EFO_0005072
part of: A-AFFY-25

LOC100134871 UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13117683160654
p value: 0.0457365167129081
refers to: LOC100134871
refers to: 1371245_a_at
t statistic: 3.27713091119507

LOC100134871
type: EnsemblDatabaseReference

Analysis of 'ethanol-containing diet' vs 'control'
type: MicroarrayDifferentialExpressionAnalysis

Reg3a
type: EnsemblDatabaseReference

Pim3
type: EnsemblDatabaseReference

Reg1a
type: EnsemblDatabaseReference

RGD1305464
type: EnsemblDatabaseReference

Hspb1
type: EnsemblDatabaseReference

Nudt4
type: EnsemblDatabaseReference

1375530_at
type: EFO_0005072
part of: A-AFFY-25

Dnajb9
type: EnsemblDatabaseReference

1368247_at
type: EFO_0005072
part of: A-AFFY-25

1387116_at
type: EFO_0005072
part of: A-AFFY-25

Reg3a
type: EnsemblDatabaseReference

Reg1a
type: EnsemblDatabaseReference

Jun
type: EnsemblDatabaseReference

Btg2
type: EnsemblDatabaseReference

Lbh
type: EnsemblDatabaseReference

Hspa1a
type: EnsemblDatabaseReference

1371092_at
type: EFO_0005072
part of: A-AFFY-25

(Assay) pancreas, ethanol diet, replicate 1
type: Assay
identifier: pancreas, ethanol diet, replicate 1
has participant: A-AFFY-25

Dbp
type: EnsemblDatabaseReference

Hspa1a
type: EnsemblDatabaseReference

1369268_at
type: EFO_0005072
part of: A-AFFY-25

Dnajb9 DOWN in 'ethanol-containing diet' vs 'control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.57588308818833
p value: 0.00154950142088894
refers to: Dnajb9
refers to: 1387116_at
t statistic: -10.4286941833414

Ddit4 UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 2.14266029617671
p value: 0.0133604680390724
refers to: 1368025_at
refers to: Ddit4
t statistic: 4.97262887195528

Gnpnat1 DOWN in 'ethanol-containing diet' vs 'control'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03273854643859
p value: 0.00330214763372379
refers to: Gnpnat1
refers to: 1375530_at
t statistic: -7.90831086127092

A-AFFY-25
type: EFO_0000269

Dbp
type: EnsemblDatabaseReference

Jun UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.36667804177379
p value: 0.0108592304249267
refers to: 1374404_at
refers to: Jun
t statistic: 5.25340185405429

Rattus norvegicus
type: OBI_0100026

LOC286960
type: EnsemblDatabaseReference

LOC684828
type: EnsemblDatabaseReference

1371245_a_at
type: EFO_0005072
part of: A-AFFY-25

Btg2 UP in 'ethanol-containing diet' vs 'control'
type: IncreasedDifferentialExpressionRatio
fold change: 1.20804233817534
p value: 0.0107198268908324
refers to: 1386994_at
refers to: Btg2
t statistic: 5.27416147094043

1387930_at
type: EFO_0005072
part of: A-AFFY-25

Atf3
type: EnsemblDatabaseReference

1371332_at
type: EFO_0005072
part of: A-AFFY-25

1367725_at
type: EFO_0005072
part of: A-AFFY-25

Dbp DOWN in 'ethanol-containing diet' vs 'control'
type: DecreasedDifferentialExpressionRatio
fold change: -2.1503547390179
p value: 0.00327040347992363
refers to: Dbp
refers to: 1387874_at
t statistic: -7.97236922147153

1374404_at
type: EFO_0005072
part of: A-AFFY-25