CGA1
type: EnsemblDatabaseReference

CCA1 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.31887813333333
p value: 0.00854652539940264
refers to: CCA1
refers to: 266719_at
t statistic: -6.19924604453941

AT1G52100
type: EnsemblDatabaseReference

251196_at
type: EFO_0005072
part of: A-AFFY-2

AT1G26250 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03279353333333
p value: 0.00328247953816976
refers to: 245874_at
refers to: AT1G26250
t statistic: 8.45210352860524

AT1G55960
type: EnsemblDatabaseReference

256012_at
type: EFO_0005072
part of: A-AFFY-2

QQS
type: EnsemblDatabaseReference

PKS2
type: EnsemblDatabaseReference

AT5G38020
type: EnsemblDatabaseReference

AT3G46490 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.29766996666667
p value: 3.93979476102523E-4
refers to: 252529_at
refers to: AT3G46490
t statistic: -16.2456863097545

TIP2;2
type: EnsemblDatabaseReference

AT4G39675 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13269866666666
p value: 0.0203682698312864
refers to: AT4G39675
refers to: 252882_at
t statistic: -4.6275983095368

257947_at
type: EFO_0005072
part of: A-AFFY-2

AT1G67865
type: EnsemblDatabaseReference

AT1G52720
type: EnsemblDatabaseReference

CGA1 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02355086666667
p value: 0.0117883556166041
refers to: 254016_at
refers to: CGA1
t statistic: 5.64100373712136

AT1G66100 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -3.1090549
p value: 2.94328395537394E-4
refers to: AT1G66100
refers to: 256527_at
t statistic: -17.9334633985969

AT4G33980 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.35138403333333
p value: 0.00630507147893136
refers to: AT4G33980
refers to: 253322_at
t statistic: 6.78521128081189

266719_at
type: EFO_0005072
part of: A-AFFY-2

SQE3
type: EnsemblDatabaseReference

AT4G33666
type: EnsemblDatabaseReference

ATEXPA8
type: EnsemblDatabaseReference

RPB5D
type: EnsemblDatabaseReference

ATMSRB9
type: EnsemblDatabaseReference

AT2G24160
type: EnsemblDatabaseReference

255604_at
type: EFO_0005072
part of: A-AFFY-2

COPT2 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4047288
p value: 6.90359052928637E-4
refers to: COPT2
refers to: 252502_at
t statistic: -13.7529135153876

AT5G23240
type: EnsemblDatabaseReference

COL9
type: EnsemblDatabaseReference

CORI3 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21841166666667
p value: 0.00208136520759931
refers to: CORI3
refers to: 254232_at
t statistic: 9.54936098048685

AT1G66100
type: EnsemblDatabaseReference

AT2G23840
type: EnsemblDatabaseReference

249732_at
type: EFO_0005072
part of: A-AFFY-2

STH
type: EnsemblDatabaseReference

PDF1.2b DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.32051666666666
p value: 0.00390448918836973
refers to: 257365_x_at
refers to: PDF1.2b
t statistic: -7.81589587728988

PDF1.2b
type: EnsemblDatabaseReference

LHY
type: EnsemblDatabaseReference

ADS1
type: EnsemblDatabaseReference

254247_at
type: EFO_0005072
part of: A-AFFY-2

AT4G33720 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.19795366666667
p value: 4.08422173877379E-4
refers to: AT4G33720
refers to: 253301_at
t statistic: 15.6577815928009

AT1G26920
type: EnsemblDatabaseReference

267389_at
type: EFO_0005072
part of: A-AFFY-2

SPL5
type: EnsemblDatabaseReference

AT5G62280 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1815998
p value: 0.0103295414313207
refers to: 247474_at
refers to: AT5G62280
t statistic: -5.84300372278952

AT1G02820
type: EnsemblDatabaseReference

GRXS2
type: EnsemblDatabaseReference

247553_at
type: EFO_0005072
part of: A-AFFY-2

AT4G39675
type: EnsemblDatabaseReference

245325_at
type: EFO_0005072
part of: A-AFFY-2

(Sample) organism part/whole seedling
type: EFO_0002906
property type: organism part
property value: whole seedling

AT1G61890
type: EnsemblDatabaseReference

ADS1 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.04017266666667
p value: 0.00153705399577999
refers to: 260957_at
refers to: ADS1
t statistic: -10.4662720193651

AT5G62280
type: EnsemblDatabaseReference

248311_at
type: EFO_0005072
part of: A-AFFY-2

254909_at
type: EFO_0005072
part of: A-AFFY-2

CYP71B5
type: EnsemblDatabaseReference

266901_at
type: EFO_0005072
part of: A-AFFY-2

CRRSP38 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.71639426666667
p value: 0.00209689982886337
refers to: CRRSP38
refers to: 257264_at
t statistic: -9.4631279436547

AT4G04410
type: EnsemblDatabaseReference

SUC2
type: EnsemblDatabaseReference

254130_at
type: EFO_0005072
part of: A-AFFY-2

249996_at
type: EFO_0005072
part of: A-AFFY-2

COL2
type: EnsemblDatabaseReference

255503_at
type: EFO_0005072
part of: A-AFFY-2

262290_at
type: EFO_0005072
part of: A-AFFY-2

ATCSLA11 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03890333333333
p value: 0.021518912660198
refers to: 246494_at
refers to: ATCSLA11
t statistic: 4.54515243499974

CRK18
type: EnsemblDatabaseReference

LECRK44 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0209031
p value: 0.00151424497323453
refers to: LECRK44
refers to: 255503_at
t statistic: -10.6131631723935

CRRSP38
type: EnsemblDatabaseReference

CAH1 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15823176666667
p value: 0.00497631007204047
refers to: 252011_at
refers to: CAH1
t statistic: -7.28421510316265

257365_x_at
type: EFO_0005072
part of: A-AFFY-2

JMJD5
type: EnsemblDatabaseReference

AGL8
type: EnsemblDatabaseReference

AT1G51080 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.22408946666667
p value: 0.00206456398126054
refers to: AT1G51080
refers to: 245743_at
t statistic: 9.62313082043269

Arabidopsis thaliana
type: OBI_0100026

JAZ7 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.7407438
p value: 0.044385815161235
refers to: 266901_at
refers to: JAZ7
t statistic: 3.53403786371401

ATNDI1
type: EnsemblDatabaseReference

AT1G51080
type: EnsemblDatabaseReference

260560_at
type: EFO_0005072
part of: A-AFFY-2

AT1G32220
type: EnsemblDatabaseReference

ATMSRB9 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01779233333333
p value: 0.0054973836356634
refers to: ATMSRB9
refers to: 254387_at
t statistic: -7.05883705084439

AT1G56300
type: EnsemblDatabaseReference

AT3G60070
type: EnsemblDatabaseReference

LURP1
type: EnsemblDatabaseReference

AT2G32160
type: EnsemblDatabaseReference

GRXC11 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14890496666667
p value: 0.0377238153965168
refers to: GRXC11
refers to: 251196_at
t statistic: -3.74104664912614

255579_at
type: EFO_0005072
part of: A-AFFY-2

AT3G51330 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04579496666667
p value: 0.00204432310738521
refers to: 252098_at
refers to: AT3G51330
t statistic: -9.68466881636309

253039_at
type: EFO_0005072
part of: A-AFFY-2

NAP
type: EnsemblDatabaseReference

AT5G11230 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0573277
p value: 0.00356528247973538
refers to: AT5G11230
refers to: 250417_at
t statistic: -8.08447330271352

252529_at
type: EFO_0005072
part of: A-AFFY-2

267337_at
type: EFO_0005072
part of: A-AFFY-2

AT4G38370 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2660838
p value: 9.09741707506305E-4
refers to: AT4G38370
refers to: 252995_at
t statistic: 12.9775423349875

261931_at
type: EFO_0005072
part of: A-AFFY-2

UNE8
type: EnsemblDatabaseReference

QQS
type: EnsemblDatabaseReference

PKS2
type: EnsemblDatabaseReference

AT5G38020
type: EnsemblDatabaseReference

260012_at
type: EFO_0005072
part of: A-AFFY-2

AT1G56300 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1452076
p value: 0.0187156802355328
refers to: AT1G56300
refers to: 256221_at
t statistic: 4.74799992003621

AT1G67865
type: EnsemblDatabaseReference

AT1G52720
type: EnsemblDatabaseReference

261480_at
type: EFO_0005072
part of: A-AFFY-2

AT1G12080
type: EnsemblDatabaseReference

AT4G29200 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.95879296666667
p value: 0.00134143491645339
refers to: AT4G29200
refers to: 253707_at
t statistic: 11.2322595675493

AT4G33666
type: EnsemblDatabaseReference

AT1G52720 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.11781166666667
p value: 0.00233373754296598
refers to: AT1G52720
refers to: 262159_at
t statistic: 9.20464294687261

AT2G39850 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.07940973333333
p value: 0.00430129681770751
refers to: AT2G39850
refers to: 245088_at
t statistic: -7.61368624257502

256386_at
type: EFO_0005072
part of: A-AFFY-2

ATEXPA8
type: EnsemblDatabaseReference

251705_at
type: EFO_0005072
part of: A-AFFY-2

257655_at
type: EFO_0005072
part of: A-AFFY-2

RPB5D
type: EnsemblDatabaseReference

ATMSRB9
type: EnsemblDatabaseReference

AT2G24160
type: EnsemblDatabaseReference

252629_at
type: EFO_0005072
part of: A-AFFY-2

AT1G02820 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.32087206666667
p value: 0.0435605708971451
refers to: 262113_at
refers to: AT1G02820
t statistic: -3.55703755299067

252412_at
type: EFO_0005072
part of: A-AFFY-2

262369_at
type: EFO_0005072
part of: A-AFFY-2

COL9
type: EnsemblDatabaseReference

251869_at
type: EFO_0005072
part of: A-AFFY-2

AT4G04410 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 3.32839286666667
p value: 3.93707267341953E-4
refers to: AT4G04410
refers to: 255333_at
t statistic: 16.6418928343716

AT2G23840
type: EnsemblDatabaseReference

251453_at
type: EFO_0005072
part of: A-AFFY-2

STH
type: EnsemblDatabaseReference

LHY
type: EnsemblDatabaseReference

AT4G22770
type: EnsemblDatabaseReference

ADS1
type: EnsemblDatabaseReference

256349_at
type: EFO_0005072
part of: A-AFFY-2

AT1G22430
type: EnsemblDatabaseReference

BETA-OHASE 2 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.83629936666667
p value: 0.0020480773682802
refers to: 248311_at
refers to: BETA-OHASE 2
t statistic: -9.65999441344532

TBL26 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.33768323333334
p value: 0.0194629500696518
refers to: 255604_at
refers to: TBL26
t statistic: 4.6870598783773

256599_at
type: EFO_0005072
part of: A-AFFY-2

PR1
type: EnsemblDatabaseReference

PSY2
type: EnsemblDatabaseReference

ROF2
type: EnsemblDatabaseReference

CORI3
type: EnsemblDatabaseReference

AT4G12500
type: EnsemblDatabaseReference

AT5G22390
type: EnsemblDatabaseReference

266423_at
type: EFO_0005072
part of: A-AFFY-2

AT4G08300
type: EnsemblDatabaseReference

DML1
type: EnsemblDatabaseReference

265119_at
type: EFO_0005072
part of: A-AFFY-2

AT4G39675
type: EnsemblDatabaseReference

266673_at
type: EFO_0005072
part of: A-AFFY-2

KELP UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10693743333333
p value: 0.0106630413087701
refers to: KELP
refers to: 254955_at
t statistic: 5.79922752732153

XTR7 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1926721
p value: 0.00636867926027488
refers to: XTR7
refers to: 245325_at
t statistic: -6.7619697978781

AT5G64170
type: EnsemblDatabaseReference

CYP71B5
type: EnsemblDatabaseReference

255127_at
type: EFO_0005072
part of: A-AFFY-2

COL2
type: EnsemblDatabaseReference

ATNDI1 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08016033333333
p value: 0.00425774451411401
refers to: 256057_at
refers to: ATNDI1
t statistic: -7.64683424041816

ATCSLA11
type: EnsemblDatabaseReference

260471_at
type: EFO_0005072
part of: A-AFFY-2

255576_at
type: EFO_0005072
part of: A-AFFY-2

259185_at
type: EFO_0005072
part of: A-AFFY-2

CRK18
type: EnsemblDatabaseReference

JMJD5
type: EnsemblDatabaseReference

246603_at
type: EFO_0005072
part of: A-AFFY-2

AGL8
type: EnsemblDatabaseReference

LECRK44
type: EnsemblDatabaseReference

AT2G16005
type: EnsemblDatabaseReference

AT2G43590
type: EnsemblDatabaseReference

245593_at
type: EFO_0005072
part of: A-AFFY-2

262412_at
type: EFO_0005072
part of: A-AFFY-2

MYB62 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.73534503333333
p value: 0.00379889860977149
refers to: 260435_at
refers to: MYB62
t statistic: 7.87130495706634

CRK18 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10262533333333
p value: 9.50147206398584E-4
refers to: 254247_at
refers to: CRK18
t statistic: 12.5478596209406

DML1 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.34943516666667
p value: 2.1269832742707E-4
refers to: 263909_at
refers to: DML1
t statistic: -20.2174287921853

PKS2 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0863828
p value: 0.00344959220569569
refers to: PKS2
refers to: 261480_at
t statistic: -8.20630057490125

AT1G51080
type: EnsemblDatabaseReference

MIOX2
type: EnsemblDatabaseReference

WRKY70
type: EnsemblDatabaseReference

AT3G54500 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.55677866666667
p value: 0.00151770331258161
refers to: 251869_at
refers to: AT3G54500
t statistic: -10.583930627694

247474_at
type: EFO_0005072
part of: A-AFFY-2

AT1G32220
type: EnsemblDatabaseReference

258923_at
type: EFO_0005072
part of: A-AFFY-2

AT2G32160
type: EnsemblDatabaseReference

AT1G56300
type: EnsemblDatabaseReference

AT3G60070
type: EnsemblDatabaseReference

LURP1
type: EnsemblDatabaseReference

AT4G30650 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27799616666666
p value: 0.00151424497323453
refers to: AT4G30650
refers to: 253627_at
t statistic: 10.7357094708395

263836_at
type: EFO_0005072
part of: A-AFFY-2

258275_at
type: EFO_0005072
part of: A-AFFY-2

XTR7
type: EnsemblDatabaseReference

247326_at
type: EFO_0005072
part of: A-AFFY-2

255822_at
type: EFO_0005072
part of: A-AFFY-2

PYL6
type: EnsemblDatabaseReference

253707_at
type: EFO_0005072
part of: A-AFFY-2

266572_at
type: EFO_0005072
part of: A-AFFY-2

NAP
type: EnsemblDatabaseReference

LHCB2.4
type: EnsemblDatabaseReference

AT5G38020 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.44090766666667
p value: 0.00425774451411401
refers to: AT5G38020
refers to: 249567_at
t statistic: -7.65417468196798

WR3
type: EnsemblDatabaseReference

PY
type: EnsemblDatabaseReference

265051_at
type: EFO_0005072
part of: A-AFFY-2

CAH1
type: EnsemblDatabaseReference

AT1G31690
type: EnsemblDatabaseReference

ATEXPB1 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.53688543333334
p value: 0.00676977890660036
refers to: 265443_at
refers to: ATEXPB1
t statistic: -6.64610881981928

UNE8
type: EnsemblDatabaseReference

256244_at
type: EFO_0005072
part of: A-AFFY-2

254016_at
type: EFO_0005072
part of: A-AFFY-2

AT3G44970
type: EnsemblDatabaseReference

264342_at
type: EFO_0005072
part of: A-AFFY-2

GPT2 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.2472526
p value: 0.0168745678268083
refers to: GPT2
refers to: 264400_at
t statistic: 4.91491782345514

263133_at
type: EFO_0005072
part of: A-AFFY-2

BGL2 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 3.02746866666667
p value: 0.00773425932712046
refers to: BGL2
refers to: 251625_at
t statistic: 6.37235738032856

AT4G01440
type: EnsemblDatabaseReference

AT3G60170 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15212773333333
p value: 0.00409497977452044
refers to: AT3G60170
refers to: 251458_at
t statistic: 7.73214942485813

AT1G12080
type: EnsemblDatabaseReference

MYB62
type: EnsemblDatabaseReference

263098_at
type: EFO_0005072
part of: A-AFFY-2

(Sample) genotype/pkl-1
type: EFO_0000001
property type: genotype
property value: pkl-1

MIOX2 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0167222
p value: 0.0414822058911641
refers to: 266693_at
refers to: MIOX2
t statistic: -3.62065693459809

AT2G39030/T7F6.20
type: EnsemblDatabaseReference

261569_at
type: EFO_0005072
part of: A-AFFY-2

A-AFFY-2
type: EFO_0000269

AT5G64170 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11525406666667
p value: 0.0134983585903634
refers to: 247323_at
refers to: AT5G64170
t statistic: -5.35119824599111

(Assay) GSM785837
type: Assay
has participant: A-AFFY-2

ESL1
type: EnsemblDatabaseReference

259244_at
type: EFO_0005072
part of: A-AFFY-2

266385_at
type: EFO_0005072
part of: A-AFFY-2

BETA-OHASE 2
type: EnsemblDatabaseReference

AT1G22430
type: EnsemblDatabaseReference

PR1
type: EnsemblDatabaseReference

PSY2
type: EnsemblDatabaseReference

256057_at
type: EFO_0005072
part of: A-AFFY-2

AT2G39850
type: EnsemblDatabaseReference

AT4G33980
type: EnsemblDatabaseReference

ATPS2
type: EnsemblDatabaseReference

ROF2
type: EnsemblDatabaseReference

E-GEOD-31639
type: microarray 1colour mrna differential
RO_0002162: Arabidopsis thaliana
description: CHD3 proteins are ATP-dependent chromatin remodeling factors that are components of diverse multisubunit complexes that can either repress or activate gene expression. In plants, the CHD3 protein PICKLE (PKL) is necessary for repression of seed-specific genes during germination and promotes deposition of the repressive epigenetic mark trimethylation of histone H3 lysine 27 (H3K27me3). It is unknown, however, if PKL acts directly at H3K27me3-enriched loci. We undertook a microarray analysis of 14-day-old plants and found that PKL continues to play an important role in expression of H3K27me3-enriched genes and in specification of developmental identity after germination. We used microarray to identify genes that are differentialy expressed in 14-day-old pkl seedlings and used chormatin immunoprecipitation to identify genes that are the direct targets of PKL. Wild-type (Col-0) and pkl-1 seedlings were grown on 1/2 MS plates with constant light and harvsted after 14-day growth. Three biological replicates.
uses data from: http://identifiers.org/pubmed/22452853

CORI3
type: EnsemblDatabaseReference

AT5G22390
type: EnsemblDatabaseReference

AT4G12500
type: EnsemblDatabaseReference

AT3G14760
type: EnsemblDatabaseReference

266383_at
type: EFO_0005072
part of: A-AFFY-2

AT1G54890
type: EnsemblDatabaseReference

ATTI3 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.128651
p value: 9.60883908072929E-4
refers to: ATTI3
refers to: 260541_at
t statistic: 12.4251500762803

AT4G08300
type: EnsemblDatabaseReference

DML1
type: EnsemblDatabaseReference

PYL6 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.07136823333333
p value: 0.0326614583249961
refers to: 263836_at
refers to: PYL6
t statistic: 3.93842029665677

AGL24
type: EnsemblDatabaseReference

250417_at
type: EFO_0005072
part of: A-AFFY-2

257264_at
type: EFO_0005072
part of: A-AFFY-2

AT1G66540 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0266251
p value: 0.0136781405830703
refers to: 256386_at
refers to: AT1G66540
t statistic: -5.3252783332493

RING1B
type: EnsemblDatabaseReference

AT5G64170
type: EnsemblDatabaseReference

COPT2
type: EnsemblDatabaseReference

AT1G52100 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.28961166666667
p value: 9.50147206398584E-4
refers to: AT1G52100
refers to: 265051_at
t statistic: 12.5694630705839

F12P19.3
type: EnsemblDatabaseReference

ATCSLA11
type: EnsemblDatabaseReference

(Assay) GSM785838
type: Assay
has participant: A-AFFY-2

264204_at
type: EFO_0005072
part of: A-AFFY-2

AT4G01440 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.25390156666667
p value: 0.00460549943874822
refers to: 255576_at
refers to: AT4G01440
t statistic: -7.48021858812095

GRF11
type: EnsemblDatabaseReference

AT4G28290
type: EnsemblDatabaseReference

251987_at
type: EFO_0005072
part of: A-AFFY-2

(Assay) GSM785834
type: Assay
has participant: A-AFFY-2

254274_at
type: EFO_0005072
part of: A-AFFY-2

LECRK44
type: EnsemblDatabaseReference

AT2G16005
type: EnsemblDatabaseReference

AT2G43590
type: EnsemblDatabaseReference

AT1G26250
type: EnsemblDatabaseReference

MIOX2
type: EnsemblDatabaseReference

CCA1
type: EnsemblDatabaseReference

WRKY70
type: EnsemblDatabaseReference

263909_at
type: EFO_0005072
part of: A-AFFY-2

SULTR4;2 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.200138
p value: 0.00612026170098204
refers to: SULTR4;2
refers to: 256244_at
t statistic: 6.86053854303802

AT5G35970
type: EnsemblDatabaseReference

249065_at
type: EFO_0005072
part of: A-AFFY-2

XTR7
type: EnsemblDatabaseReference

AT1G67865 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.0129437
p value: 2.1269832742707E-4
refers to: AT1G67865
refers to: 260012_at
t statistic: -19.7136171039879

SULTR4;2
type: EnsemblDatabaseReference

AT1G14960 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.36815746666667
p value: 0.00209027103458148
refers to: AT1G14960
refers to: 262838_at
t statistic: -9.49305150279938

PYL6
type: EnsemblDatabaseReference

ICL UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.13865766666667
p value: 0.003415271255884
refers to: ICL
refers to: 257947_at
t statistic: 8.28420492054744

LHCB2.4
type: EnsemblDatabaseReference

PY
type: EnsemblDatabaseReference

254573_at
type: EFO_0005072
part of: A-AFFY-2

AT2G39980 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.27826
p value: 0.0133224233961102
refers to: AT2G39980
refers to: 267337_at
t statistic: -5.37734345913458

ATEXPB1
type: EnsemblDatabaseReference

264019_at
type: EFO_0005072
part of: A-AFFY-2

AT4G29200
type: EnsemblDatabaseReference

AT1G31690
type: EnsemblDatabaseReference

AT3G44970
type: EnsemblDatabaseReference

SDR4
type: EnsemblDatabaseReference

AT4G29610
type: EnsemblDatabaseReference

CLE2
type: EnsemblDatabaseReference

AT2G37900
type: EnsemblDatabaseReference

AT4G01440
type: EnsemblDatabaseReference

ICL
type: EnsemblDatabaseReference

257774_at
type: EFO_0005072
part of: A-AFFY-2

AT2G39030/T7F6.20 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.1405127
p value: 0.00354072775004342
refers to: AT2G39030/T7F6.20
refers to: 266142_at
t statistic: 8.1467057778673

MYB62
type: EnsemblDatabaseReference

267565_at
type: EFO_0005072
part of: A-AFFY-2

AT4G07820
type: EnsemblDatabaseReference

248551_at
type: EFO_0005072
part of: A-AFFY-2

Analysis of 'pkl-1' vs 'wild type'
type: MicroarrayDifferentialExpressionAnalysis

AT1G31690 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.86727536666667
p value: 0.00354072775004342
refers to: AT1G31690
refers to: 246603_at
t statistic: -8.15546638838033

AT2G39030/T7F6.20
type: EnsemblDatabaseReference

AT3G44970 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.25371236666667
p value: 0.00206456398126054
refers to: 252629_at
refers to: AT3G44970
t statistic: -9.59844035169754

265837_at
type: EFO_0005072
part of: A-AFFY-2

246573_at
type: EFO_0005072
part of: A-AFFY-2

COL7
type: EnsemblDatabaseReference

245501_at
type: EFO_0005072
part of: A-AFFY-2

COL9 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01207893333333
p value: 0.0016032151503804
refers to: COL9
refers to: 259244_at
t statistic: 10.3742143344853

260603_at
type: EFO_0005072
part of: A-AFFY-2

ESL1
type: EnsemblDatabaseReference

AT3G23060
type: EnsemblDatabaseReference

253679_at
type: EFO_0005072
part of: A-AFFY-2

BETA-OHASE 2
type: EnsemblDatabaseReference

265698_at
type: EFO_0005072
part of: A-AFFY-2

SCPL7 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02563226666667
p value: 0.00586558409373314
refers to: SCPL7
refers to: 258923_at
t statistic: 6.96157814750936

AT4G38370
type: EnsemblDatabaseReference

AT2G32160 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.11373136666667
p value: 0.00612026170098204
refers to: AT2G32160
refers to: 265698_at
t statistic: -6.88094413640248

SUC2 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23483533333333
p value: 0.00119410849866703
refers to: 264204_at
refers to: SUC2
t statistic: -11.6615829112871

COL2 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.78358183333333
p value: 0.0150663804967486
refers to: COL2
refers to: 258497_at
t statistic: -5.13825915057508

AT1G80130 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13758723333333
p value: 0.0122123788218033
refers to: 262050_at
refers to: AT1G80130
t statistic: 5.56097211616845

AT2G39850
type: EnsemblDatabaseReference

AT4G33980
type: EnsemblDatabaseReference

AGL8 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00897586666667
p value: 0.00222497327990478
refers to: 247553_at
refers to: AGL8
t statistic: -9.33197870305757

ATPS2
type: EnsemblDatabaseReference

AT3G28270
type: EnsemblDatabaseReference

256300_at
type: EFO_0005072
part of: A-AFFY-2

GRXC11
type: EnsemblDatabaseReference

AT3G14760
type: EnsemblDatabaseReference

CYP71A12
type: EnsemblDatabaseReference

AT1G54890
type: EnsemblDatabaseReference

GMI1
type: EnsemblDatabaseReference

257985_at
type: EFO_0005072
part of: A-AFFY-2

BGLU28
type: EnsemblDatabaseReference

JAC1
type: EnsemblDatabaseReference

AGL24
type: EnsemblDatabaseReference

AT4G11210 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10971563333333
p value: 0.00113594690265372
refers to: AT4G11210
refers to: 254909_at
t statistic: -11.971586324824

RING1B
type: EnsemblDatabaseReference

GPT2
type: EnsemblDatabaseReference

COPT2
type: EnsemblDatabaseReference

CYP19-2 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10758543333333
p value: 0.00123197366727371
refers to: 264019_at
refers to: CYP19-2
t statistic: 11.5627765522209

AT1G80130
type: EnsemblDatabaseReference

266142_at
type: EFO_0005072
part of: A-AFFY-2

IAA14 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1376532
p value: 0.00432980249469745
refers to: IAA14
refers to: 245593_at
t statistic: -7.5837219886827

F12P19.3
type: EnsemblDatabaseReference

GRF11
type: EnsemblDatabaseReference

AT4G28290
type: EnsemblDatabaseReference

FMO1 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.61490716666667
p value: 0.0168318445670702
refers to: FMO1
refers to: 256012_at
t statistic: -4.92085528466189

KELP
type: EnsemblDatabaseReference

BGL2
type: EnsemblDatabaseReference

AT1G12080 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.44591773333334
p value: 0.00134143491645339
refers to: AT1G12080
refers to: 264342_at
t statistic: -11.0876499272729

AT1G14960
type: EnsemblDatabaseReference

WR3 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10029543333333
p value: 0.00354605912642454
refers to: WR3
refers to: 248551_at
t statistic: -8.13081654313836

254232_at
type: EFO_0005072
part of: A-AFFY-2

CCA1
type: EnsemblDatabaseReference

AT1G78450 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45376366666667
p value: 0.0122970537126445
refers to: AT1G78450
refers to: 263133_at
t statistic: 5.53982091512983

JAL23 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.55368713333333
p value: 0.0029548882763482
refers to: 266989_at
refers to: JAL23
t statistic: 8.67115600917158

LHCB2.4 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.312723
p value: 0.00356528247973538
refers to: LHCB2.4
refers to: 258239_at
t statistic: -8.09767596901546

265993_at
type: EFO_0005072
part of: A-AFFY-2

T2E22.34
type: EnsemblDatabaseReference

AT1G11070
type: EnsemblDatabaseReference

249932_at
type: EFO_0005072
part of: A-AFFY-2

AT5G35970
type: EnsemblDatabaseReference

245874_at
type: EFO_0005072
part of: A-AFFY-2

AT2G16005 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13165626666667
p value: 0.0379665669475791
refers to: 263098_at
refers to: AT2G16005
t statistic: -3.72788711823854

SULTR4;2
type: EnsemblDatabaseReference

253627_at
type: EFO_0005072
part of: A-AFFY-2

AT4G19420 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09216973333333
p value: 0.0257971685024722
refers to: 254573_at
refers to: AT4G19420
t statistic: 4.27928105610358

ATEXPB1
type: EnsemblDatabaseReference

AT4G29200
type: EnsemblDatabaseReference

AT3G15760 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03387366666667
p value: 0.0168745678268083
refers to: 258275_at
refers to: AT3G15760
t statistic: -4.91725085633703

249784_at
type: EFO_0005072
part of: A-AFFY-2

IAA14
type: EnsemblDatabaseReference

256060_at
type: EFO_0005072
part of: A-AFFY-2

256527_at
type: EFO_0005072
part of: A-AFFY-2

252502_at
type: EFO_0005072
part of: A-AFFY-2

263252_at
type: EFO_0005072
part of: A-AFFY-2

QQS UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.1070551
p value: 0.00356528247973538
refers to: QQS
refers to: 256940_at
t statistic: 8.08531921622855

254644_at
type: EFO_0005072
part of: A-AFFY-2

AT3G60170
type: EnsemblDatabaseReference

LHY DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.088335
p value: 0.00612026170098204
refers to: LHY
refers to: 261569_at
t statistic: -6.87440910362616

253322_at
type: EFO_0005072
part of: A-AFFY-2

SDR4
type: EnsemblDatabaseReference

ESL1 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.006251
p value: 0.0106922754727265
refers to: 264652_at
refers to: ESL1
t statistic: 5.79222146476581

AT4G29610
type: EnsemblDatabaseReference

264289_at
type: EFO_0005072
part of: A-AFFY-2

CLE2
type: EnsemblDatabaseReference

AT3G23060 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.40619446666667
p value: 8.41931530526884E-5
refers to: 257768_at
refers to: AT3G23060
t statistic: 24.5564014914696

AT1G32220 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13053133333334
p value: 0.00630507147893136
refers to: 245793_at
refers to: AT1G32220
t statistic: -6.7912800057759

AT2G37900
type: EnsemblDatabaseReference

AT2G24160 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2034012
p value: 0.00204310690674166
refers to: 265993_at
refers to: AT2G24160
t statistic: -9.73357782389998

ICL
type: EnsemblDatabaseReference

259927_at
type: EFO_0005072
part of: A-AFFY-2

AT5G11230
type: EnsemblDatabaseReference

AT1G31690 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.008467
p value: 0.0137018718706983
refers to: AT1G31690
refers to: 246573_at
t statistic: -5.30633176971712

AT4G07820
type: EnsemblDatabaseReference

265443_at
type: EFO_0005072
part of: A-AFFY-2

FMO GS-OX4
type: EnsemblDatabaseReference

AT4G22770 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1496892
p value: 0.00178871191951509
refers to: 254274_at
refers to: AT4G22770
t statistic: 10.02194941761

PER70
type: EnsemblDatabaseReference

AT2G39980
type: EnsemblDatabaseReference

COL7
type: EnsemblDatabaseReference

AT3G23060
type: EnsemblDatabaseReference

AAE8
type: EnsemblDatabaseReference

ATPRB1 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.215639
p value: 0.003415271255884
refers to: ATPRB1
refers to: 266383_at
t statistic: -8.25601265679675

AT1G22430 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.27703533333333
p value: 0.00208136520759931
refers to: 261931_at
refers to: AT1G22430
t statistic: -9.52315186303554

AT2G43590 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.9183247
p value: 6.21416484638605E-4
refers to: 260560_at
refers to: AT2G43590
t statistic: -14.2581402083588

ATTI3
type: EnsemblDatabaseReference

AT3G28270
type: EnsemblDatabaseReference

262159_at
type: EFO_0005072
part of: A-AFFY-2

GRXC11
type: EnsemblDatabaseReference

ROF2 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5953512
p value: 0.00151424497323453
refers to: ROF2
refers to: 248657_at
t statistic: -10.6862694008553

CYP71A12
type: EnsemblDatabaseReference

GMI1
type: EnsemblDatabaseReference

JAL23
type: EnsemblDatabaseReference

AT1G26920
type: EnsemblDatabaseReference

BGLU28
type: EnsemblDatabaseReference

PSY2 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.91614416666667
p value: 0.00268160484205513
refers to: 252412_at
refers to: PSY2
t statistic: -8.92903679049048

JAC1
type: EnsemblDatabaseReference

ATMES18 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.38938316666667
p value: 0.00388348652901803
refers to: ATMES18
refers to: 247814_at
t statistic: 7.82903218546202

245088_at
type: EFO_0005072
part of: A-AFFY-2

AT1G55960 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.28033726666667
p value: 0.0326060660817612
refers to: AT1G55960
refers to: 260603_at
t statistic: -3.94651785230134

AT1G78450
type: EnsemblDatabaseReference

AT1G11070 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.61318753333333
p value: 4.08422173877379E-4
refers to: 260471_at
refers to: AT1G11070
t statistic: 15.8448355846973

GPT2
type: EnsemblDatabaseReference

AT3G46490
type: EnsemblDatabaseReference

246494_at
type: EFO_0005072
part of: A-AFFY-2

AT1G80130
type: EnsemblDatabaseReference

AT4G22770
type: EnsemblDatabaseReference

AT1G70985
type: EnsemblDatabaseReference

PR1 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.18817346666667
p value: 0.0131302618014144
refers to: PR1
refers to: 266385_at
t statistic: 5.42697621521282

251458_at
type: EFO_0005072
part of: A-AFFY-2

247814_at
type: EFO_0005072
part of: A-AFFY-2

HIS1-3
type: EnsemblDatabaseReference

TIP2;2 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06489599999999
p value: 0.00115046689796138
refers to: 245399_at
refers to: TIP2;2
t statistic: -11.9008632741223

254955_at
type: EFO_0005072
part of: A-AFFY-2

TBL26
type: EnsemblDatabaseReference

KELP
type: EnsemblDatabaseReference

BGL2
type: EnsemblDatabaseReference

JAZ7
type: EnsemblDatabaseReference

AT1G14960
type: EnsemblDatabaseReference

FMO1
type: EnsemblDatabaseReference

ATPPT2
type: EnsemblDatabaseReference

255160_at
type: EFO_0005072
part of: A-AFFY-2

CYP71B5 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.20124496666666
p value: 0.00177283702093975
refers to: 251987_at
refers to: CYP71B5
t statistic: -10.0550305654054

AT4G15620
type: EnsemblDatabaseReference

256221_at
type: EFO_0005072
part of: A-AFFY-2

AT5G44260
type: EnsemblDatabaseReference

RING1B UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45026856666667
p value: 4.53296017612459E-4
refers to: RING1B
refers to: 265086_at
t statistic: 15.0311973195153

ATPS2 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27340956666667
p value: 0.00252408287631513
refers to: 262369_at
refers to: ATPS2
t statistic: 9.0638622234116

T2E22.34
type: EnsemblDatabaseReference

ATPRB1
type: EnsemblDatabaseReference

CYP71A12 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13931573333333
p value: 0.00379889860977149
refers to: 267565_at
refers to: CYP71A12
t statistic: -7.90475658795395

AT3G60070 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2159962
p value: 0.0115847530894133
refers to: AT3G60070
refers to: 251453_at
t statistic: -5.66549265096526

AT4G11210
type: EnsemblDatabaseReference

IAA14
type: EnsemblDatabaseReference

AT3G60170
type: EnsemblDatabaseReference

263688_at
type: EFO_0005072
part of: A-AFFY-2

PGL5 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.24223966666667
p value: 0.0326060660817612
refers to: 249732_at
refers to: PGL5
t statistic: -3.94068584225248

SDR4 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.30452236666667
p value: 0.00194196863807246
refers to: 257774_at
refers to: SDR4
t statistic: -9.87925011183453

AT3G14760 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.33267826666667
p value: 0.0257868288009286
refers to: AT3G14760
refers to: 256599_at
t statistic: -4.28285900791675

254819_at
type: EFO_0005072
part of: A-AFFY-2

252011_at
type: EFO_0005072
part of: A-AFFY-2

245399_at
type: EFO_0005072
part of: A-AFFY-2

AT3G54500
type: EnsemblDatabaseReference

AT5G11230
type: EnsemblDatabaseReference

AT1G70985 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.30407633333333
p value: 0.0230220095258998
refers to: AT1G70985
refers to: 262290_at
t statistic: -4.43412696856981

SPL5 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14658573333333
p value: 6.50133543961234E-4
refers to: SPL5
refers to: 257051_at
t statistic: -14.0625676076984

COL7 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5068747
p value: 0.021855414431391
refers to: COL7
refers to: 260380_at
t statistic: -4.51596978178101

WR3
type: EnsemblDatabaseReference

AT1G26920 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0335473
p value: 0.0115910617262829
refers to: AT1G26920
refers to: 263688_at
t statistic: -5.66090233870074

AT1G54890 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02935023333333
p value: 0.0140956061749203
refers to: 256349_at
refers to: AT1G54890
t statistic: -5.26478414721822

PGL5
type: EnsemblDatabaseReference

CAH1
type: EnsemblDatabaseReference

FMO GS-OX4
type: EnsemblDatabaseReference

PY UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.30253816666667
p value: 0.00134143491645339
refers to: PY
refers to: 266673_at
t statistic: 11.1214904070595

PER70
type: EnsemblDatabaseReference

AT2G39980
type: EnsemblDatabaseReference

265817_at
type: EFO_0005072
part of: A-AFFY-2

SQE3 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1156765
p value: 0.00371446160062255
refers to: 253039_at
refers to: SQE3
t statistic: -7.98121146769946

AT1G07050
type: EnsemblDatabaseReference

AT1G66540
type: EnsemblDatabaseReference

(Assay) GSM785836
type: Assay
has participant: A-AFFY-2

245793_at
type: EFO_0005072
part of: A-AFFY-2

AGL24 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22418956666667
p value: 0.00151424497323453
refers to: AGL24
refers to: 254130_at
t statistic: -10.6275375880979

AAE8
type: EnsemblDatabaseReference

262050_at
type: EFO_0005072
part of: A-AFFY-2

257051_at
type: EFO_0005072
part of: A-AFFY-2

AT4G30650
type: EnsemblDatabaseReference

CYP19-2
type: EnsemblDatabaseReference

STH DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.56171086666667
p value: 0.037960126106289
refers to: STH
refers to: 263252_at
t statistic: -3.73069399618095

257768_at
type: EFO_0005072
part of: A-AFFY-2

AT1G78780
type: EnsemblDatabaseReference

260435_at
type: EFO_0005072
part of: A-AFFY-2

(Sample) organism/Arabidopsis thaliana
type: Arabidopsis thaliana
property type: organism
property value: Arabidopsis thaliana

ATTI3
type: EnsemblDatabaseReference

AT4G33666 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12416333333333
p value: 0.0422570242291821
refers to: AT4G33666
refers to: 253305_at
t statistic: -3.59391176924537

JAL23
type: EnsemblDatabaseReference

AT4G19420
type: EnsemblDatabaseReference

266989_at
type: EFO_0005072
part of: A-AFFY-2

AT3G51330
type: EnsemblDatabaseReference

CYP705A19 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.8211563
p value: 8.03102937442566E-4
refers to: CYP705A19
refers to: 257129_at
t statistic: 13.2902899215189

AT1G78450
type: EnsemblDatabaseReference

AT3G46490
type: EnsemblDatabaseReference

AT1G70985
type: EnsemblDatabaseReference

ATMES18
type: EnsemblDatabaseReference

AT4G07820 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0878008
p value: 0.00387358473009002
refers to: AT4G07820
refers to: 255160_at
t statistic: -7.83881427032256

HIS1-3
type: EnsemblDatabaseReference

260380_at
type: EFO_0005072
part of: A-AFFY-2

TBL26
type: EnsemblDatabaseReference

FMO GS-OX4 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2798066
p value: 3.38935614823334E-4
refers to: 265119_at
refers to: FMO GS-OX4
t statistic: -17.2878964829442

258239_at
type: EFO_0005072
part of: A-AFFY-2

CYP705A19
type: EnsemblDatabaseReference

JAZ7
type: EnsemblDatabaseReference

FMO1
type: EnsemblDatabaseReference

ATPPT2
type: EnsemblDatabaseReference

247323_at
type: EFO_0005072
part of: A-AFFY-2

245743_at
type: EFO_0005072
part of: A-AFFY-2

GRF11 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2756284
p value: 0.00944105812147907
refers to: GRF11
refers to: 262412_at
t statistic: -6.01302666869748

AT4G15620
type: EnsemblDatabaseReference

AT5G44260
type: EnsemblDatabaseReference

262113_at
type: EFO_0005072
part of: A-AFFY-2

(Sample) genotype/wild type genotype
type: EFO_0000001
property type: genotype
property value: wild type genotype

JMJD5 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4418372
p value: 3.93707267341953E-4
refers to: JMJD5
refers to: 257985_at
t statistic: 16.4493658281243

SCPL7
type: EnsemblDatabaseReference

ATPRB1
type: EnsemblDatabaseReference

HMGB10 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01798453333333
p value: 0.00455559317667613
refers to: HMGB10
refers to: 257655_at
t statistic: 7.498534233388

256940_at
type: EFO_0005072
part of: A-AFFY-2

249567_at
type: EFO_0005072
part of: A-AFFY-2

252882_at
type: EFO_0005072
part of: A-AFFY-2

252995_at
type: EFO_0005072
part of: A-AFFY-2

BGLU28 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06475756666667
p value: 0.0110762625574531
refers to: BGLU28
refers to: 267389_at
t statistic: 5.73071442655636

AT4G11210
type: EnsemblDatabaseReference

ATPPT2 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.74980443333333
p value: 0.00222497327990478
refers to: ATPPT2
refers to: 259185_at
t statistic: -9.32579348784937

249850_at
type: EFO_0005072
part of: A-AFFY-2

255333_at
type: EFO_0005072
part of: A-AFFY-2

CLE2 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.50125403333333
p value: 4.08422173877379E-4
refers to: CLE2
refers to: 254644_at
t statistic: -15.7632384141276

NAP DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22786923333333
p value: 0.0398419092048236
refers to: NAP
refers to: 256300_at
t statistic: -3.67184584160795

AAE8 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.5130453
p value: 0.00515643659708168
refers to: AAE8
refers to: 262698_at
t statistic: 7.17291000491644

AT1G26250
type: EnsemblDatabaseReference

AT3G15760
type: EnsemblDatabaseReference

AT4G33720
type: EnsemblDatabaseReference

HMGB10
type: EnsemblDatabaseReference

BHLH57
type: EnsemblDatabaseReference

AT1G78780 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09701443333333
p value: 4.53296017612459E-4
refers to: AT1G78780
refers to: 264301_at
t statistic: 15.0859996261123

248657_at
type: EFO_0005072
part of: A-AFFY-2

AT3G54500
type: EnsemblDatabaseReference

PGL5
type: EnsemblDatabaseReference

AT2G23840 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.44044186666667
p value: 0.0105870942455953
refers to: 266572_at
refers to: AT2G23840
t statistic: -5.80826616990979

251625_at
type: EFO_0005072
part of: A-AFFY-2

CGA1
type: EnsemblDatabaseReference

AT1G07050
type: EnsemblDatabaseReference

AT1G52100
type: EnsemblDatabaseReference

AT1G66540
type: EnsemblDatabaseReference

AT2G37900 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.08241676666667
p value: 0.00481539147933344
refers to: AT2G37900
refers to: 266108_at
t statistic: 7.39518361256877

AT5G44260 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1788944
p value: 0.042168958315854
refers to: AT5G44260
refers to: 249065_at
t statistic: -3.59647680959531

F12P19.3 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.33571343333333
p value: 0.0272339552153242
refers to: F12P19.3
refers to: 261914_at
t statistic: -4.20482007752533

AT1G55960
type: EnsemblDatabaseReference

AT4G30650
type: EnsemblDatabaseReference

258497_at
type: EFO_0005072
part of: A-AFFY-2

264652_at
type: EFO_0005072
part of: A-AFFY-2

CYP19-2
type: EnsemblDatabaseReference

TIP2;2
type: EnsemblDatabaseReference

252098_at
type: EFO_0005072
part of: A-AFFY-2

AT1G78780
type: EnsemblDatabaseReference

260957_at
type: EFO_0005072
part of: A-AFFY-2

260541_at
type: EFO_0005072
part of: A-AFFY-2

SQE3
type: EnsemblDatabaseReference

(Assay) GSM785835
type: Assay
has participant: A-AFFY-2

253305_at
type: EFO_0005072
part of: A-AFFY-2

264400_at
type: EFO_0005072
part of: A-AFFY-2

261914_at
type: EFO_0005072
part of: A-AFFY-2

AT4G19420
type: EnsemblDatabaseReference

AT4G08300 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.601726
p value: 0.00278940011672358
refers to: 255127_at
refers to: AT4G08300
t statistic: -8.80274198470113

262838_at
type: EFO_0005072
part of: A-AFFY-2

256603_at
type: EFO_0005072
part of: A-AFFY-2

(Sample) age/14
type: EFO_0000001
property type: age
property value: 14

AT3G51330
type: EnsemblDatabaseReference

AT5G35970 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11736333333333
p value: 0.00907208393841029
refers to: AT5G35970
refers to: 249677_at
t statistic: -6.08382205871136

(Factor value) GENOTYPE/wild type genotype
type: EFO_0000001
property type: GENOTYPE
property value: wild type genotype

253814_at
type: EFO_0005072
part of: A-AFFY-2

AT5G23240
type: EnsemblDatabaseReference

AT4G15620 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.31708066666667
p value: 0.00134143491645339
refers to: 245501_at
refers to: AT4G15620
t statistic: -11.0628995034987

AT1G61890 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09790933333333
p value: 0.0310765327962837
refers to: AT1G61890
refers to: 264289_at
t statistic: 4.01967469415526

AT1G66100
type: EnsemblDatabaseReference

GRXS2 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.37319266666667
p value: 0.00130255826252518
refers to: 249996_at
refers to: GRXS2
t statistic: -11.3922437343755

257129_at
type: EFO_0005072
part of: A-AFFY-2

ATMES18
type: EnsemblDatabaseReference

AT4G38370
type: EnsemblDatabaseReference

PDF1.2b
type: EnsemblDatabaseReference

249677_at
type: EFO_0005072
part of: A-AFFY-2

HIS1-3 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.31303503333333
p value: 0.0257971685024722
refers to: HIS1-3
refers to: 265817_at
t statistic: 4.27481200180497

CYP705A19
type: EnsemblDatabaseReference

(Assay) GSM785833
type: Assay
has participant: A-AFFY-2

253301_at
type: EFO_0005072
part of: A-AFFY-2

AT3G28270 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2421446
p value: 0.0207244748517457
refers to: AT3G28270
refers to: 256603_at
t statistic: 4.60162635500339

RPB5D UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03530443333333
p value: 0.00297252444211719
refers to: RPB5D
refers to: 266423_at
t statistic: 8.64186243240373

264301_at
type: EFO_0005072
part of: A-AFFY-2

UNE8 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13631413333334
p value: 0.00119410849866703
refers to: 258890_at
refers to: UNE8
t statistic: 11.7753737435994

PER70 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2136714
p value: 9.3088015450581E-4
refers to: 247326_at
refers to: PER70
t statistic: 12.8404006470386

SPL5
type: EnsemblDatabaseReference

WRKY70 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.038278
p value: 0.0221485300410578
refers to: WRKY70
refers to: 251705_at
t statistic: -4.49658661544512

SCPL7
type: EnsemblDatabaseReference

AT1G02820
type: EnsemblDatabaseReference

266693_at
type: EFO_0005072
part of: A-AFFY-2

GRXS2
type: EnsemblDatabaseReference

AT5G23240 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27670783333333
p value: 0.00684189569095512
refers to: 249850_at
refers to: AT5G23240
t statistic: 6.5934133465337

AT1G61890
type: EnsemblDatabaseReference

BHLH57 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.67450436666667
p value: 0.0388662675607284
refers to: 255579_at
refers to: BHLH57
t statistic: -3.70664099272081

AT5G62280
type: EnsemblDatabaseReference

265086_at
type: EFO_0005072
part of: A-AFFY-2

AT4G04410
type: EnsemblDatabaseReference

SUC2
type: EnsemblDatabaseReference

AT4G28290 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22800983333333
p value: 0.0284724147149503
refers to: 253814_at
refers to: AT4G28290
t statistic: -4.13473782296871

254387_at
type: EFO_0005072
part of: A-AFFY-2

(Sample) ecotype/Columbia
type: EFO_0005147
property type: ecotype
property value: Columbia

CRRSP38
type: EnsemblDatabaseReference

GMI1 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.5520616
p value: 2.18244111549799E-4
refers to: GMI1
refers to: 249784_at
t statistic: 19.0642478807645

AT5G22390 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2096842
p value: 0.00567275839198354
refers to: AT5G22390
refers to: 249932_at
t statistic: -7.00641014822477

AT3G15760
type: EnsemblDatabaseReference

AT4G33720
type: EnsemblDatabaseReference

AT1G07050 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.13468226666667
p value: 0.0122099554257732
refers to: 256060_at
refers to: AT1G07050
t statistic: 5.57265311260352

AT4G29610 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2696299
p value: 0.0191982432944357
refers to: 253679_at
refers to: AT4G29610
t statistic: 4.70282249594083

ATEXPA8 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.3800289
p value: 0.039267204772584
refers to: 255822_at
refers to: ATEXPA8
t statistic: -3.69281693409145

AT4G12500 UP in 'pkl-1' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02558663333333
p value: 0.00266412011723779
refers to: AT4G12500
refers to: 254819_at
t statistic: 8.9725663562574

HMGB10
type: EnsemblDatabaseReference

BHLH57
type: EnsemblDatabaseReference

AT1G11070
type: EnsemblDatabaseReference

ATNDI1
type: EnsemblDatabaseReference

256266_at
type: EFO_0005072
part of: A-AFFY-2

(Factor value) GENOTYPE/pkl-1
type: EFO_0000001
property type: GENOTYPE
property value: pkl-1

T2E22.34 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.93912216666667
p value: 0.00854652539940264
refers to: T2E22.34
refers to: 256266_at
t statistic: -6.19581638007039

LURP1 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22469983333333
p value: 0.0326060660817612
refers to: LURP1
refers to: 265837_at
t statistic: -3.94123849851583

258890_at
type: EFO_0005072
part of: A-AFFY-2

JAC1 DOWN in 'pkl-1' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03375033333333
p value: 0.00379889860977149
refers to: JAC1
refers to: 259927_at
t statistic: -7.90305897943461

266108_at
type: EFO_0005072
part of: A-AFFY-2

262698_at
type: EFO_0005072
part of: A-AFFY-2