ATBCB
type: EnsemblDatabaseReference

LEA18
type: EnsemblDatabaseReference

ATPMEPCRB
type: EnsemblDatabaseReference

PGL5
type: EnsemblDatabaseReference

246238_at
type: EFO_0005072
part of: A-AFFY-2

CRU3 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.89064636666667
p value: 0.0127775986545954
refers to: 253767_at
refers to: CRU3
t statistic: 6.31169599398075

DIN2 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.35354596666667
p value: 0.00339993394431818
refers to: DIN2
refers to: 251428_at
t statistic: 9.28718075441121

245041_at
type: EFO_0005072
part of: A-AFFY-2

AT4G27280 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.00136383333333
p value: 0.00334556352866084
refers to: 253915_at
refers to: AT4G27280
t statistic: 9.629794743394

ATTI1
type: EnsemblDatabaseReference

SRG1
type: EnsemblDatabaseReference

AT2G33850 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.0322899
p value: 0.0169247166281441
refers to: AT2G33850
refers to: 267459_at
t statistic: -5.63908133132442

AtCYS2 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.92642263333333
p value: 0.0193083814217286
refers to: AtCYS2
refers to: 265672_at
t statistic: 5.39245994621268

HSPRO2
type: EnsemblDatabaseReference

264079_at
type: EFO_0005072
part of: A-AFFY-2

AT3G46600 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.08039926666667
p value: 0.0128067318551689
refers to: 252483_at
refers to: AT3G46600
t statistic: 6.27904712941995

AT1G47980 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2289023
p value: 0.00112357714500834
refers to: 259615_at
refers to: AT1G47980
t statistic: 12.4535195079669

SRG1 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13645683333333
p value: 0.0182358425358795
refers to: SRG1
refers to: 262482_at
t statistic: 5.53356423011962

AT5G01030 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3575943
p value: 0.00702105809961271
refers to: 251123_at
refers to: AT5G01030
t statistic: -7.52804462093988

AT2G21820
type: EnsemblDatabaseReference

261892_at
type: EFO_0005072
part of: A-AFFY-2

LEA18 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.37559713333333
p value: 0.00137350196339375
refers to: LEA18
refers to: 266544_at
t statistic: 11.9411951012326

BETA-VPE
type: EnsemblDatabaseReference

ATXTH19
type: EnsemblDatabaseReference

AT1G56300
type: EnsemblDatabaseReference

AT2G47780
type: EnsemblDatabaseReference

245528_at
type: EFO_0005072
part of: A-AFFY-2

AT1G80130
type: EnsemblDatabaseReference

CRU3
type: EnsemblDatabaseReference

AT3G05260 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.16886173333333
p value: 0.00259880775841383
refers to: AT3G05260
refers to: 259314_at
t statistic: 10.288311033764

259167_at
type: EFO_0005072
part of: A-AFFY-2

PAP85
type: EnsemblDatabaseReference

260088_at
type: EFO_0005072
part of: A-AFFY-2

CP1 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.26695343333333
p value: 0.00267786148297193
refers to: CP1
refers to: 246250_at
t statistic: 10.1698239642145

AR781 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2000658
p value: 0.00568295089717318
refers to: AR781
refers to: 245041_at
t statistic: 8.00599399682046

AT3G05260
type: EnsemblDatabaseReference

AT3G46600
type: EnsemblDatabaseReference

AT2G20870 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2521197
p value: 0.0497611987431942
refers to: 265441_at
refers to: AT2G20870
t statistic: -4.15465890698682

M17 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 3.12461706666667
p value: 0.00339993394431818
refers to: 266393_at
refers to: M17
t statistic: 9.22141280972691

WRKY70
type: EnsemblDatabaseReference

GASA3
type: EnsemblDatabaseReference

AT2G37870
type: EnsemblDatabaseReference

PPDK
type: EnsemblDatabaseReference

CRK30 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.53822116666667
p value: 0.0297971620043881
refers to: CRK30
refers to: 254931_at
t statistic: -4.82548732508969

262118_at
type: EFO_0005072
part of: A-AFFY-2

AT4G01390
type: EnsemblDatabaseReference

AT1G29090
type: EnsemblDatabaseReference

AT1G32560 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4110807
p value: 0.00339993394431818
refers to: 256464_at
refers to: AT1G32560
t statistic: 9.46477582622346

(Assay) GSM768917
type: Assay
has participant: A-AFFY-2

AT5G01075 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.33659526666667
p value: 0.0144727262189345
refers to: AT5G01075
refers to: 251141_at
t statistic: -6.01518469066433

260716_at
type: EFO_0005072
part of: A-AFFY-2

266503_at
type: EFO_0005072
part of: A-AFFY-2

DELTA-VPE
type: EnsemblDatabaseReference

265672_at
type: EFO_0005072
part of: A-AFFY-2

AT1G75900
type: EnsemblDatabaseReference

255048_at
type: EFO_0005072
part of: A-AFFY-2

262482_at
type: EFO_0005072
part of: A-AFFY-2

AT5G01030
type: EnsemblDatabaseReference

AT3G15720
type: EnsemblDatabaseReference

BETA-VPE UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.5439348
p value: 6.91176124203225E-4
refers to: BETA-VPE
refers to: 262644_at
t statistic: 15.2693761573714

262730_at
type: EFO_0005072
part of: A-AFFY-2

AKR4C8
type: EnsemblDatabaseReference

COB
type: EnsemblDatabaseReference

AT3G16530
type: EnsemblDatabaseReference

AT3G27520
type: EnsemblDatabaseReference

257206_at
type: EFO_0005072
part of: A-AFFY-2

AT4G27280
type: EnsemblDatabaseReference

ATPER1 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.68103603333333
p value: 0.00339993394431818
refers to: 260716_at
refers to: ATPER1
t statistic: 9.39078092091134

AT1G75900 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2117907
p value: 0.00646503238991501
refers to: AT1G75900
refers to: 262682_at
t statistic: 7.72372865142791

DREB26
type: EnsemblDatabaseReference

(Assay) GSM768919
type: Assay
has participant: A-AFFY-2

AT1G32560
type: EnsemblDatabaseReference

AT1G29090 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 3.10166656666667
p value: 8.76591221686095E-5
refers to: AT1G29090
refers to: 260890_at
t statistic: 22.101458517201

AT1G66100
type: EnsemblDatabaseReference

266516_at
type: EFO_0005072
part of: A-AFFY-2

AT3G01570
type: EnsemblDatabaseReference

253841_at
type: EFO_0005072
part of: A-AFFY-2

259314_at
type: EFO_0005072
part of: A-AFFY-2

AT4G28040
type: EnsemblDatabaseReference

BGLU19
type: EnsemblDatabaseReference

AT3G04210 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13898446666667
p value: 0.0144997437012165
refers to: 258537_at
refers to: AT3G04210
t statistic: -5.95680243799416

BGLU10 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0643397
p value: 0.0136321798085767
refers to: BGLU10
refers to: 253841_at
t statistic: 6.1715737687688

AT3G12900
type: EnsemblDatabaseReference

AT2G43620
type: EnsemblDatabaseReference

251428_at
type: EFO_0005072
part of: A-AFFY-2

255524_at
type: EFO_0005072
part of: A-AFFY-2

262644_at
type: EFO_0005072
part of: A-AFFY-2

ATNAS2 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21817386666666
p value: 0.0113584521716342
refers to: 248048_at
refers to: ATNAS2
t statistic: -6.4919797291105

258347_at
type: EFO_0005072
part of: A-AFFY-2

CYP81D1 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.080533
p value: 0.0182358425358795
refers to: CYP81D1
refers to: 256589_at
t statistic: 5.50665473785054

GRP3S
type: EnsemblDatabaseReference

261957_at
type: EFO_0005072
part of: A-AFFY-2

M17
type: EnsemblDatabaseReference

CRK30
type: EnsemblDatabaseReference

AT4G10270
type: EnsemblDatabaseReference

LEA18
type: EnsemblDatabaseReference

COB UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 3.77616233333334
p value: 7.05512262833924E-4
refers to: COB
refers to: 247552_at
t statistic: 14.908632400096

BGLU44
type: EnsemblDatabaseReference

AT1G80130 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1043196
p value: 0.00979421712493379
refers to: AT1G80130
refers to: 262050_at
t statistic: 6.7275120745844

AT2G28490 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.85983953333333
p value: 0.00941077903074147
refers to: 264079_at
refers to: AT2G28490
t statistic: 6.83771490553379

253829_at
type: EFO_0005072
part of: A-AFFY-2

AT3G16530 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.59278143333333
p value: 0.00174369617710328
refers to: AT3G16530
refers to: 257206_at
t statistic: -11.396665548535

246099_at
type: EFO_0005072
part of: A-AFFY-2

ATNAS2
type: EnsemblDatabaseReference

ATTI1 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.98424196666667
p value: 0.0153423098411876
refers to: ATTI1
refers to: 260551_at
t statistic: 5.80408978442387

ATTI1
type: EnsemblDatabaseReference

SRG1
type: EnsemblDatabaseReference

HSPRO2
type: EnsemblDatabaseReference

AR781
type: EnsemblDatabaseReference

AT4G28040 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.19672883333333
p value: 0.00717327969633026
refers to: AT4G28040
refers to: 253829_at
t statistic: 7.47978835909928

BGLU11 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.70881793333333
p value: 0.00985128423036255
refers to: 262118_at
refers to: BGLU11
t statistic: 6.70678805765792

AT2G47780 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02192346666667
p value: 0.0152696567437256
refers to: 266503_at
refers to: AT2G47780
t statistic: 5.85086144141968

266415_at
type: EFO_0005072
part of: A-AFFY-2

BGLU10
type: EnsemblDatabaseReference

ATBCB UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.4550455
p value: 0.00682506249325318
refers to: ATBCB
refers to: 246099_at
t statistic: 7.5855953883919

OLEO1
type: EnsemblDatabaseReference

ATBCAT-2
type: EnsemblDatabaseReference

AT3G15720 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.23408566666667
p value: 0.0279102845905007
refers to: 258252_at
refers to: AT3G15720
t statistic: 4.96666188110015

AT2G21820
type: EnsemblDatabaseReference

251142_at
type: EFO_0005072
part of: A-AFFY-2

AT3G17520
type: EnsemblDatabaseReference

249732_at
type: EFO_0005072
part of: A-AFFY-2

AT2G28490
type: EnsemblDatabaseReference

BETA-VPE
type: EnsemblDatabaseReference

AT2G47780
type: EnsemblDatabaseReference

265053_at
type: EFO_0005072
part of: A-AFFY-2

ATPER1
type: EnsemblDatabaseReference

(Assay) GSM768915
type: Assay
has participant: A-AFFY-2

AT5G01015 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -3.4136544
p value: 5.27681740935582E-4
refers to: AT5G01015
refers to: 251142_at
t statistic: -16.305767286952

266098_at
type: EFO_0005072
part of: A-AFFY-2

AT1G32920 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.380361
p value: 0.043488874742112
refers to: AT1G32920
refers to: 261193_at
t statistic: 4.38166409714587

260856_at
type: EFO_0005072
part of: A-AFFY-2

LBD41
type: EnsemblDatabaseReference

CRA1
type: EnsemblDatabaseReference

AT3G17520 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2628884
p value: 0.0329617820941363
refers to: AT3G17520
refers to: 258347_at
t statistic: 4.69919662670849

AT2G43620 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.5208932
p value: 0.00682506249325318
refers to: 260556_at
refers to: AT2G43620
t statistic: 7.60781901112174

GRXC13 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.41726393333333
p value: 0.0144727262189345
refers to: GRXC13
refers to: 266516_at
t statistic: -5.98377865383334

AT3G46600
type: EnsemblDatabaseReference

GRP3S UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.38575333333334
p value: 8.01748558469858E-4
refers to: GRP3S
refers to: 263046_at
t statistic: 13.8262096685396

254931_at
type: EFO_0005072
part of: A-AFFY-2

WRKY33 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.6522757
p value: 0.0128067318551689
refers to: WRKY33
refers to: 267028_at
t statistic: 6.26591567303981

LCR78
type: EnsemblDatabaseReference

ATOCT3 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21959453333333
p value: 0.00941077903074147
refers to: 262730_at
refers to: ATOCT3
t statistic: -6.8420993322901

GASA3
type: EnsemblDatabaseReference

AT5G01075
type: EnsemblDatabaseReference

AT2G37870
type: EnsemblDatabaseReference

PPDK
type: EnsemblDatabaseReference

ATMGL
type: EnsemblDatabaseReference

256527_at
type: EFO_0005072
part of: A-AFFY-2

DIN2
type: EnsemblDatabaseReference

ACS6
type: EnsemblDatabaseReference

AT1G29090
type: EnsemblDatabaseReference

TEM1 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.07026046666667
p value: 0.0146376165686337
refers to: 255742_at
refers to: TEM1
t statistic: 5.93287572898412

AT5G01015
type: EnsemblDatabaseReference

CP1
type: EnsemblDatabaseReference

LTP2 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.96836233333334
p value: 0.00439778275911575
refers to: LTP2
refers to: 266415_at
t statistic: 8.6193459806772

WRKY40
type: EnsemblDatabaseReference

AtCYS2
type: EnsemblDatabaseReference

255742_at
type: EFO_0005072
part of: A-AFFY-2

262050_at
type: EFO_0005072
part of: A-AFFY-2

Arabidopsis thaliana
type: OBI_0100026

AT1G73480 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.32612023333334
p value: 0.00439778275911575
refers to: AT1G73480
refers to: 245734_at
t statistic: 8.54348672693751

CYP72A8 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14605856666667
p value: 0.0413464372961543
refers to: CYP72A8
refers to: 258063_at
t statistic: 4.43979179705398

AT1G66940
type: EnsemblDatabaseReference

ATPMEPCRB UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.90493496666667
p value: 0.00947169402309545
refers to: ATPMEPCRB
refers to: 255524_at
t statistic: 6.79489283721915

OLEO1 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.22943486666667
p value: 9.89338873560905E-4
refers to: OLEO1
refers to: 254095_at
t statistic: 12.9616102081994

CYP72A8
type: EnsemblDatabaseReference

AT1G47980
type: EnsemblDatabaseReference

LCR78 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.03112536666667
p value: 0.0329415369831123
refers to: LCR78
refers to: 261135_at
t statistic: 4.70672525572213

259615_at
type: EFO_0005072
part of: A-AFFY-2

253915_at
type: EFO_0005072
part of: A-AFFY-2

ATBCAT-2 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.30177633333333
p value: 0.00334556352866084
refers to: 264524_at
refers to: ATBCAT-2
t statistic: 9.73171761734853

263046_at
type: EFO_0005072
part of: A-AFFY-2

258487_at
type: EFO_0005072
part of: A-AFFY-2

TEM1
type: EnsemblDatabaseReference

COB
type: EnsemblDatabaseReference

CYP81D1
type: EnsemblDatabaseReference

BGLU44 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01800853333333
p value: 0.0329617820941363
refers to: 258151_at
refers to: BGLU44
t statistic: 4.69612559598386

AT3G16530
type: EnsemblDatabaseReference

AT1G52000
type: EnsemblDatabaseReference

PPDK UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09478193333333
p value: 0.00422228429237991
refers to: PPDK
refers to: 245528_at
t statistic: 8.79286626575064

AT4G27280
type: EnsemblDatabaseReference

DREB26
type: EnsemblDatabaseReference

AT3G27520
type: EnsemblDatabaseReference

AT2G33850
type: EnsemblDatabaseReference

267459_at
type: EFO_0005072
part of: A-AFFY-2

AT1G66100
type: EnsemblDatabaseReference

AT4G28040
type: EnsemblDatabaseReference

BGLU19
type: EnsemblDatabaseReference

252483_at
type: EFO_0005072
part of: A-AFFY-2

E-GEOD-31033
type: microarray 1colour mrna differential
RO_0002162: Arabidopsis thaliana
description: Cell adhesion in plants is mediated predominantly by pectins, a group of complex cell wall associated polysaccharides. An Arabidopsis mutant, friable1 (frb1), was identified through a screen of T-DNA insertion lines that exhibited defective cell adhesion. Interestingly, the frb1 plants displayed both cell and organ dissociations and also ectopic organ fusions. The FRB1 gene encodes a Golgi-localized, plant specific protein with only weak sequence similarities to known proteins (DUF246). Unlike other cell adhesion deficient mutants, frb1 mutants do not have reduced levels of adhesion related cell wall polymers, such as pectins. Instead, FRB1 affects the abundance of galactose- and arabinose-containing oligosaccharides in the Golgi. Furthermore, frb1 mutants displayed alteration in pectin methylesterification, cell wall associated extensins and xyloglucan microstructure. We propose that abnormal FRB1 action has pleiotropic consequences on wall architecture, affecting both the extensin and pectin matrices, with consequent changes to the biomechanical properties of the wall and middle lamella, thereby influencing cell-cell adhesion. Microarrays were used to determine the differences in global expression of friable1 mutant plants, which have cell adhesion defects, and compared these to wild-type plants. RNA was extracted from seedlings grown on 0.5X MS for 10 days under constant illumination.
uses data from: http://identifiers.org/pubmed/22916179

AT4G01390 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15621506666667
p value: 0.00334556352866084
refers to: AT4G01390
refers to: 255621_at
t statistic: -9.65000611083602

251141_at
type: EFO_0005072
part of: A-AFFY-2

AT2G20870
type: EnsemblDatabaseReference

(Assay) GSM768916
type: Assay
has participant: A-AFFY-2

258327_at
type: EFO_0005072
part of: A-AFFY-2

STZ
type: EnsemblDatabaseReference

AT3G12900
type: EnsemblDatabaseReference

262682_at
type: EFO_0005072
part of: A-AFFY-2

AT2G43620
type: EnsemblDatabaseReference

AT1G32920
type: EnsemblDatabaseReference

ATOCT3
type: EnsemblDatabaseReference

257130_at
type: EFO_0005072
part of: A-AFFY-2

LTP2
type: EnsemblDatabaseReference

(Sample) genotype/wild type genotype
type: EFO_0000001
property type: genotype
property value: wild type genotype

267357_at
type: EFO_0005072
part of: A-AFFY-2

CRK30
type: EnsemblDatabaseReference

258151_at
type: EFO_0005072
part of: A-AFFY-2

DREB26 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.34990806666667
p value: 0.00832343534138076
refers to: DREB26
refers to: 260856_at
t statistic: 7.14167040185596

BGLU44
type: EnsemblDatabaseReference

ALPHA-TIP
type: EnsemblDatabaseReference

LBD41 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3192982
p value: 0.0184571690927467
refers to: LBD41
refers to: 258487_at
t statistic: -5.45716745756226

(Factor value) GENOTYPE/wild type genotype
type: EFO_0000001
property type: GENOTYPE
property value: wild type genotype

AT1G52000 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.20266556666667
p value: 0.0105909267353588
refers to: AT1G52000
refers to: 265053_at
t statistic: 6.59701649410581

AT2G37870 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.73633043333334
p value: 0.00439778275911575
refers to: 266098_at
refers to: AT2G37870
t statistic: 8.56929176245312

ALPHA-TIP UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.30948303333333
p value: 0.00339993394431818
refers to: 260088_at
refers to: ALPHA-TIP
t statistic: 9.51606097091664

267181_at
type: EFO_0005072
part of: A-AFFY-2

AT1G66100 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16835133333333
p value: 0.00785423582489892
refers to: AT1G66100
refers to: 256527_at
t statistic: -7.27365091226576

WRKY70 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.11115726666667
p value: 0.0466177705102644
refers to: WRKY70
refers to: 251705_at
t statistic: 4.26304073124541

ATNAS2
type: EnsemblDatabaseReference

AR781
type: EnsemblDatabaseReference

267028_at
type: EFO_0005072
part of: A-AFFY-2

ACS6 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.6094296
p value: 0.0054556989932418
refers to: ACS6
refers to: 254926_at
t statistic: 8.17577447725703

PLT6
type: EnsemblDatabaseReference

253608_at
type: EFO_0005072
part of: A-AFFY-2

265441_at
type: EFO_0005072
part of: A-AFFY-2

WRKY33
type: EnsemblDatabaseReference

GRXC13
type: EnsemblDatabaseReference

BGLU11
type: EnsemblDatabaseReference

257135_at
type: EFO_0005072
part of: A-AFFY-2

BGLU10
type: EnsemblDatabaseReference

261135_at
type: EFO_0005072
part of: A-AFFY-2

AT1G73480
type: EnsemblDatabaseReference

OLEO1
type: EnsemblDatabaseReference

ATBCAT-2
type: EnsemblDatabaseReference

AT3G04210
type: EnsemblDatabaseReference

261193_at
type: EFO_0005072
part of: A-AFFY-2

ATBCB
type: EnsemblDatabaseReference

260890_at
type: EFO_0005072
part of: A-AFFY-2

ATPMEPCRB
type: EnsemblDatabaseReference

AT3G17520
type: EnsemblDatabaseReference

(Assay) GSM768914
type: Assay
has participant: A-AFFY-2

PGL5
type: EnsemblDatabaseReference

AT2G28490
type: EnsemblDatabaseReference

(Sample) genotype/frb1 mutant
type: EFO_0000001
property type: genotype
property value: frb1 mutant

(Sample) organism/Arabidopsis thaliana
type: Arabidopsis thaliana
property type: organism
property value: Arabidopsis thaliana

255807_at
type: EFO_0005072
part of: A-AFFY-2

ATPER1
type: EnsemblDatabaseReference

AT3G12900 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03326526666667
p value: 0.00339993394431818
refers to: 257135_at
refers to: AT3G12900
t statistic: -9.28950543393648

WRKY40 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.40739326666667
p value: 0.00112357714500834
refers to: WRKY40
refers to: 261892_at
t statistic: 12.4423872520157

(Factor value) GENOTYPE/frb1 mutant
type: EFO_0000001
property type: GENOTYPE
property value: frb1 mutant

LBD41
type: EnsemblDatabaseReference

258252_at
type: EFO_0005072
part of: A-AFFY-2

251123_at
type: EFO_0005072
part of: A-AFFY-2

CRA1
type: EnsemblDatabaseReference

256589_at
type: EFO_0005072
part of: A-AFFY-2

ATMGL UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.42163113333333
p value: 0.00492082652903655
refers to: 261957_at
refers to: ATMGL
t statistic: 8.35637104363883

LCR78
type: EnsemblDatabaseReference

PAP85 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.22062133333333
p value: 8.01748558469858E-4
refers to: PAP85
refers to: 258327_at
t statistic: 13.7211281779218

ATXTH19 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.87310233333334
p value: 9.89338873560905E-4
refers to: ATXTH19
refers to: 253608_at
t statistic: 13.0231588284652

266393_at
type: EFO_0005072
part of: A-AFFY-2

AT5G01075
type: EnsemblDatabaseReference

PGL5 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11241713333333
p value: 0.0054556989932418
refers to: PGL5
refers to: 249732_at
t statistic: -8.15626720758002

ATMGL
type: EnsemblDatabaseReference

DIN2
type: EnsemblDatabaseReference

Analysis of 'frb1 mutant' vs 'wild type'
type: MicroarrayDifferentialExpressionAnalysis

257969_at
type: EFO_0005072
part of: A-AFFY-2

254095_at
type: EFO_0005072
part of: A-AFFY-2

ACS6
type: EnsemblDatabaseReference

AT5G01015
type: EnsemblDatabaseReference

ATXTH19
type: EnsemblDatabaseReference

258063_at
type: EFO_0005072
part of: A-AFFY-2

AT1G56300
type: EnsemblDatabaseReference

CP1
type: EnsemblDatabaseReference

WRKY40
type: EnsemblDatabaseReference

AtCYS2
type: EnsemblDatabaseReference

AT1G80130
type: EnsemblDatabaseReference

251705_at
type: EFO_0005072
part of: A-AFFY-2

CRU3
type: EnsemblDatabaseReference

253767_at
type: EFO_0005072
part of: A-AFFY-2

PAP85
type: EnsemblDatabaseReference

AT1G66940
type: EnsemblDatabaseReference

258537_at
type: EFO_0005072
part of: A-AFFY-2

245734_at
type: EFO_0005072
part of: A-AFFY-2

261648_at
type: EFO_0005072
part of: A-AFFY-2

CYP72A8
type: EnsemblDatabaseReference

AT1G47980
type: EnsemblDatabaseReference

AT3G05260
type: EnsemblDatabaseReference

(Sample) organism part/whole organism
type: EFO_0002906
property type: organism part
property value: whole organism

TEM1
type: EnsemblDatabaseReference

AT2G21820 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09693516666667
p value: 0.0297971620043881
refers to: AT2G21820
refers to: 263881_at
t statistic: 4.82936140953042

WRKY70
type: EnsemblDatabaseReference

CYP81D1
type: EnsemblDatabaseReference

AT1G52000
type: EnsemblDatabaseReference

256814_at
type: EFO_0005072
part of: A-AFFY-2

AT4G01390
type: EnsemblDatabaseReference

AT2G33850
type: EnsemblDatabaseReference

(Sample) germplasm/Col-0
type: EFO_0005148
property type: germplasm
property value: Col-0

AT1G56300 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1399872
p value: 0.0384865418460059
refers to: 256221_at
refers to: AT1G56300
t statistic: 4.50662184217726

HSPRO2 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.6066345
p value: 0.0144727262189345
refers to: 267357_at
refers to: HSPRO2
t statistic: 6.05329653640304

AT3G01570 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15038306666667
p value: 0.0254510687234005
refers to: 259167_at
refers to: AT3G01570
t statistic: 5.07054230737919

AT3G27520 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 5.27261093333334
p value: 5.67850788235721E-5
refers to: 257969_at
refers to: AT3G27520
t statistic: 24.4391263398141

256221_at
type: EFO_0005072
part of: A-AFFY-2

263881_at
type: EFO_0005072
part of: A-AFFY-2

AT2G20870
type: EnsemblDatabaseReference

DELTA-VPE
type: EnsemblDatabaseReference

256464_at
type: EFO_0005072
part of: A-AFFY-2

STZ
type: EnsemblDatabaseReference

AT1G75900
type: EnsemblDatabaseReference

BGLU19 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.0129814
p value: 0.00339993394431818
refers to: BGLU19
refers to: 256814_at
t statistic: 9.22664595311152

AT1G32920
type: EnsemblDatabaseReference

255621_at
type: EFO_0005072
part of: A-AFFY-2

260551_at
type: EFO_0005072
part of: A-AFFY-2

ATOCT3
type: EnsemblDatabaseReference

AT5G01030
type: EnsemblDatabaseReference

AT4G10270 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.67302383333333
p value: 0.00197702151230688
refers to: 255807_at
refers to: AT4G10270
t statistic: -11.0262947728905

AT3G15720
type: EnsemblDatabaseReference

LTP2
type: EnsemblDatabaseReference

PLT6 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.17062476666667
p value: 0.0103406777503219
refers to: PLT6
refers to: 246238_at
t statistic: 6.63768008482792

AKR4C8
type: EnsemblDatabaseReference

(Sample) developmental stage/seedling
type: EFO_0001992
property type: developmental stage
property value: seedling

246250_at
type: EFO_0005072
part of: A-AFFY-2

255856_at
type: EFO_0005072
part of: A-AFFY-2

254926_at
type: EFO_0005072
part of: A-AFFY-2

ALPHA-TIP
type: EnsemblDatabaseReference

266544_at
type: EFO_0005072
part of: A-AFFY-2

AT1G32560
type: EnsemblDatabaseReference

CRA1 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 4.1022222
p value: 8.01748558469858E-4
refers to: CRA1
refers to: 249082_at
t statistic: 13.9171116967823

AT3G01570
type: EnsemblDatabaseReference

DELTA-VPE UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.75621726666667
p value: 0.00339993394431818
refers to: DELTA-VPE
refers to: 257130_at
t statistic: 9.21124843870013

A-AFFY-2
type: EFO_0000269

STZ UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 2.0369937
p value: 0.0144997437012165
refers to: STZ
refers to: 261648_at
t statistic: 5.95214550242396

248048_at
type: EFO_0005072
part of: A-AFFY-2

249082_at
type: EFO_0005072
part of: A-AFFY-2

PLT6
type: EnsemblDatabaseReference

AT1G66940 DOWN in 'frb1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00605503333334
p value: 0.00785423582489892
refers to: 255856_at
refers to: AT1G66940
t statistic: -7.2674536880787

AKR4C8 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.11121843333333
p value: 0.00554585697293336
refers to: 267181_at
refers to: AKR4C8
t statistic: 8.10555939082985

GASA3 UP in 'frb1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.17804103333333
p value: 0.00941077903074147
refers to: GASA3
refers to: 255048_at
t statistic: 6.82776056072658

WRKY33
type: EnsemblDatabaseReference

260556_at
type: EFO_0005072
part of: A-AFFY-2

(Assay) GSM768918
type: Assay
has participant: A-AFFY-2

GRXC13
type: EnsemblDatabaseReference

BGLU11
type: EnsemblDatabaseReference

GRP3S
type: EnsemblDatabaseReference

264524_at
type: EFO_0005072
part of: A-AFFY-2

M17
type: EnsemblDatabaseReference

AT1G73480
type: EnsemblDatabaseReference

247552_at
type: EFO_0005072
part of: A-AFFY-2

AT4G10270
type: EnsemblDatabaseReference

AT3G04210
type: EnsemblDatabaseReference