CYP78A8 UP in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27967178330816
p value: 0.0107613329881066
refers to: CYP78A8
refers to: 261574_at
t statistic: 5.79952764776514

PLT3 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1033813941182
p value: 0.00703729777239276
refers to: PLT3
refers to: 265922_at
t statistic: 6.36384601710641

259783_at
type: EFO_0005072
part of: A-AFFY-2

255786_at
type: EFO_0005072
part of: A-AFFY-2

AT2G25790 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.32874111330104
p value: 0.00395443171110045
refers to: 266663_at
refers to: AT2G25790
t statistic: -7.73536905576833

(Assay) GSM610377
type: Assay
has participant: A-AFFY-2

ATHB-7 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.96462582038066
p value: 0.0351514145178082
refers to: ATHB-7
refers to: 266327_at
t statistic: -3.90810311272316

FLA9 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.79335007676201
p value: 0.0107051670657953
refers to: 265066_at
refers to: FLA9
t statistic: 5.78832277167813

AT5G45670
type: EnsemblDatabaseReference

266989_at
type: EFO_0005072
part of: A-AFFY-2

266738_at
type: EFO_0005072
part of: A-AFFY-2

AT1G54020
type: EnsemblDatabaseReference

HIS1-3
type: EnsemblDatabaseReference

264931_at
type: EFO_0005072
part of: A-AFFY-2

Arabidopsis thaliana
type: OBI_0100026

AT3G46880
type: EnsemblDatabaseReference

260831_at
type: EFO_0005072
part of: A-AFFY-2

SAUR68
type: EnsemblDatabaseReference

(Sample) genotype/wox4-1 mutant
type: EFO_0000001
property type: genotype
property value: wox4-1 mutant

RCI2B
type: EnsemblDatabaseReference

(Assay) GSM610385
type: Assay
has participant: A-AFFY-2

JAL23
type: EnsemblDatabaseReference

AT1G77330
type: EnsemblDatabaseReference

AT4G30830 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16331080245403
p value: 0.00357605125496208
refers to: AT4G30830
refers to: 253595_at
t statistic: -8.02182579590347

AT2G10940 UP in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04296386675329
p value: 0.0263423733968966
refers to: AT2G10940
refers to: 265400_at
t statistic: 4.55734297921275

KUP6
type: EnsemblDatabaseReference

ATGH9B3 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.35321317822734
p value: 0.00128036652509788
refers to: 259897_at
refers to: ATGH9B3
t statistic: -10.3628731182389

265400_at
type: EFO_0005072
part of: A-AFFY-2

AT3G46880 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45119220152804
p value: 0.00742479385865217
refers to: 252501_at
refers to: AT3G46880
t statistic: 6.25306958745995

AT4G27450
type: EnsemblDatabaseReference

RD20
type: EnsemblDatabaseReference

(Sample) organism/Arabidopsis thaliana
type: Arabidopsis thaliana
property type: organism
property value: Arabidopsis thaliana

263549_at
type: EFO_0005072
part of: A-AFFY-2

AT2G25790 DOWN in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11568056676052
p value: 0.00102245575155908
refers to: 266663_at
refers to: AT2G25790
t statistic: -10.8128346331097

ATPRP2 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.69882301993001
p value: 0.00257913357980308
refers to: ATPRP2
refers to: 264007_at
t statistic: 8.61866961268406

AT5G45670
type: EnsemblDatabaseReference

Analysis of 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: MicroarrayDifferentialExpressionAnalysis

GRXS11 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.05349165463179
p value: 0.0123169990545467
refers to: GRXS11
refers to: 260831_at
t statistic: 5.59467370744093

267425_at
type: EFO_0005072
part of: A-AFFY-2

AT1G60590 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11416682961929
p value: 0.00128036652509788
refers to: AT1G60590
refers to: 264931_at
t statistic: -11.1676990038563

(Assay) GSM610382
type: Assay
has participant: A-AFFY-2

HIS1-3
type: EnsemblDatabaseReference

CA1
type: EnsemblDatabaseReference

AT3G46880
type: EnsemblDatabaseReference

(Assay) GSM610378
type: Assay
has participant: A-AFFY-2

246390_at
type: EFO_0005072
part of: A-AFFY-2

AT1G77330 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01556005586454
p value: 0.00959650163540033
refers to: 246390_at
refers to: AT1G77330
t statistic: 5.91607556674971

AT4G23820
type: EnsemblDatabaseReference

AT2G47010
type: EnsemblDatabaseReference

APG
type: EnsemblDatabaseReference

AT2G25790
type: EnsemblDatabaseReference

AT3G11930 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03460860337217
p value: 0.0118947275444296
refers to: AT3G11930
refers to: 258727_at
t statistic: -5.63921731876978

RCI2B
type: EnsemblDatabaseReference

254001_at
type: EFO_0005072
part of: A-AFFY-2

AT1G77330
type: EnsemblDatabaseReference

KUP6
type: EnsemblDatabaseReference

AT1G29500
type: EnsemblDatabaseReference

AT2G33830
type: EnsemblDatabaseReference

AT4G29700 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08619234431442
p value: 0.00357605125496208
refers to: AT4G29700
refers to: 253697_at
t statistic: -8.03533222769664

AT4G27450
type: EnsemblDatabaseReference

ATGH9B3
type: EnsemblDatabaseReference

267461_at
type: EFO_0005072
part of: A-AFFY-2

RD20
type: EnsemblDatabaseReference

248912_at
type: EFO_0005072
part of: A-AFFY-2

AT2G10940
type: EnsemblDatabaseReference

HIS1-3 DOWN in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17060406265636
p value: 0.0448930109471987
refers to: HIS1-3
refers to: 265817_at
t statistic: -3.87088972584037

AT1G64370
type: EnsemblDatabaseReference

AT2G10940 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 2.09462922630889
p value: 0.0036197424020043
refers to: AT2G10940
refers to: 265400_at
t statistic: 7.9547844142473

266327_at
type: EFO_0005072
part of: A-AFFY-2

MIOX4
type: EnsemblDatabaseReference

AT2G34810
type: EnsemblDatabaseReference

MIOX4 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15288948487815
p value: 0.0036197424020043
refers to: MIOX4
refers to: 254001_at
t statistic: 7.96893801701023

CA1
type: EnsemblDatabaseReference

(Sample) age/49 to 58
type: EFO_0000001
property type: age
property value: 49 to 58

(Assay) GSM610379
type: Assay
has participant: A-AFFY-2

APG
type: EnsemblDatabaseReference

AT4G23820
type: EnsemblDatabaseReference

AT2G47010
type: EnsemblDatabaseReference

AT1G60590
type: EnsemblDatabaseReference

248676_at
type: EFO_0005072
part of: A-AFFY-2

(Factor value) GENOTYPE/wild type genotype
type: EFO_0000001
property type: GENOTYPE
property value: wild type genotype

ANR1
type: EnsemblDatabaseReference

259897_at
type: EFO_0005072
part of: A-AFFY-2

AT1G54020 DOWN in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -2.57956605748034
p value: 0.00115775332724232
refers to: AT1G54020
refers to: 263161_at
t statistic: -10.4365638522825

263431_at
type: EFO_0005072
part of: A-AFFY-2

AT2G33830
type: EnsemblDatabaseReference

AT2G43670 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.20644045247411
p value: 0.0037580238681372
refers to: AT2G43670
refers to: 260611_at
t statistic: -7.85561416516724

260611_at
type: EFO_0005072
part of: A-AFFY-2

AT1G29500
type: EnsemblDatabaseReference

GLP1
type: EnsemblDatabaseReference

AT1G65450
type: EnsemblDatabaseReference

AT4G38840
type: EnsemblDatabaseReference

ATHB-7
type: EnsemblDatabaseReference

266663_at
type: EFO_0005072
part of: A-AFFY-2

262978_at
type: EFO_0005072
part of: A-AFFY-2

JAL23 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2103634682837
p value: 0.00320290741000164
refers to: JAL23
refers to: 266989_at
t statistic: -8.2779659397531

ATGH9B3
type: EnsemblDatabaseReference

ATMRU1 UP in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.33479198182987
p value: 0.00144711856425834
refers to: ATMRU1
refers to: 249727_at
t statistic: 9.57301526372806

AT2G10940
type: EnsemblDatabaseReference

AT1G64370
type: EnsemblDatabaseReference

MEE3
type: EnsemblDatabaseReference

MIOX4
type: EnsemblDatabaseReference

ATCLH1 DOWN in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14113919281542
p value: 0.00816905133931622
refers to: ATCLH1
refers to: 255786_at
t statistic: -6.25039235044956

AT2G34810
type: EnsemblDatabaseReference

AZI1
type: EnsemblDatabaseReference

257216_at
type: EFO_0005072
part of: A-AFFY-2

259773_at
type: EFO_0005072
part of: A-AFFY-2

(Factor value) ORGANISM_PART/base of stem
type: EFO_0000001
property type: ORGANISM_PART
property value: base of stem

NRT1.5
type: EnsemblDatabaseReference

259161_at
type: EFO_0005072
part of: A-AFFY-2

263295_at
type: EFO_0005072
part of: A-AFFY-2

AT1G29500 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04490937003657
p value: 0.00179716843423074
refers to: 259773_at
refers to: AT1G29500
t statistic: 9.81238336091517

AT1G60590
type: EnsemblDatabaseReference

ANR1
type: EnsemblDatabaseReference

TUB1 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.00481662141975
p value: 0.00128036652509788
refers to: TUB1
refers to: 262978_at
t statistic: 12.2703166052257

AT1G64370 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.09157265643238
p value: 0.00904801706522635
refers to: AT1G64370
refers to: 259765_at
t statistic: -6.00098062397982

245275_at
type: EFO_0005072
part of: A-AFFY-2

GLP1
type: EnsemblDatabaseReference

AT1G65450
type: EnsemblDatabaseReference

ATHB-7
type: EnsemblDatabaseReference

AT3G13650/MMM17_4 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02334746006495
p value: 0.00128036652509788
refers to: AT3G13650/MMM17_4
refers to: 256781_at
t statistic: 10.7586886417287

260221_at
type: EFO_0005072
part of: A-AFFY-2

ATBETA-AMY
type: EnsemblDatabaseReference

AT2G33830 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23295163393222
p value: 0.00239939909273744
refers to: 267461_at
refers to: AT2G33830
t statistic: -8.81344226531224

ATPRP2
type: EnsemblDatabaseReference

MEE3
type: EnsemblDatabaseReference

AZI1
type: EnsemblDatabaseReference

AZI1 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.20513514812403
p value: 0.01112570376032
refers to: AZI1
refers to: 254818_at
t statistic: 5.74238492792339

(Assay) GSM610383
type: Assay
has participant: A-AFFY-2

NRT1.5
type: EnsemblDatabaseReference

GRXS11
type: EnsemblDatabaseReference

GASA6
type: EnsemblDatabaseReference

(Sample) ecotype/Columbia
type: EFO_0005147
property type: ecotype
property value: Columbia

AT5G45670 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06754499280477
p value: 0.00257913357980308
refers to: AT5G45670
refers to: 248912_at
t statistic: 8.5764067825723

ATSDI1
type: EnsemblDatabaseReference

GASA6 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.89912093818664
p value: 0.0220711544179543
refers to: GASA6
refers to: 260221_at
t statistic: 4.59292619003057

AT4G29700
type: EnsemblDatabaseReference

(Sample) organism part/base of stem
type: EFO_0000001
property type: organism part
property value: base of stem

CYP78A8 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04357205580546
p value: 0.00666526673409921
refers to: CYP78A8
refers to: 261574_at
t statistic: 6.46632949569858

ANR1 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03414984245282
p value: 0.00128036652509788
refers to: ANR1
refers to: 263295_at
t statistic: -11.1755849578807

CA1 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03365070181121
p value: 0.0257136275211934
refers to: CA1
refers to: 259161_at
t statistic: 4.34856255609632

ATMRU1
type: EnsemblDatabaseReference

ATPSK2 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13295865833164
p value: 0.00232476636293337
refers to: 266799_at
refers to: ATPSK2
t statistic: -8.96799878632018

AT2G22170
type: EnsemblDatabaseReference

Analysis of 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: MicroarrayDifferentialExpressionAnalysis

NRT1.5 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.95876851621796
p value: 0.00128036652509788
refers to: 260693_at
refers to: NRT1.5
t statistic: -13.1191830694806

ATBETA-AMY
type: EnsemblDatabaseReference

CYP707A1 DOWN in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.19895116839815
p value: 0.00102245575155908
refers to: CYP707A1
refers to: 254562_at
t statistic: -11.8314951446407

ATPRP2
type: EnsemblDatabaseReference

259765_at
type: EFO_0005072
part of: A-AFFY-2

AT4G38840 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.12540479592279
p value: 0.00573048842351577
refers to: 252972_at
refers to: AT4G38840
t statistic: 6.70964013259835

APG UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01719560502901
p value: 0.00232476636293337
refers to: APG
refers to: 259375_at
t statistic: 8.96132727859507

AT4G14020
type: EnsemblDatabaseReference

256781_at
type: EFO_0005072
part of: A-AFFY-2

(Sample) organism part/first internode of stem
type: EFO_0000001
property type: organism part
property value: first internode of stem

C/VIF1 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01393947730778
p value: 0.0121917567902779
refers to: 259616_at
refers to: C/VIF1
t statistic: -5.6106933645101

GRXS11
type: EnsemblDatabaseReference

ATMRU1 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.20393082282225
p value: 0.00596724318435162
refers to: ATMRU1
refers to: 249727_at
t statistic: 6.62869612459334

GASA6
type: EnsemblDatabaseReference

A-AFFY-2
type: EFO_0000269

ATSDI1 DOWN in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17682318374786
p value: 0.036800496768674
refers to: 248676_at
refers to: ATSDI1
t statistic: -4.12083438082504

255795_at
type: EFO_0005072
part of: A-AFFY-2

ATSDI1
type: EnsemblDatabaseReference

AT2G43670
type: EnsemblDatabaseReference

253595_at
type: EFO_0005072
part of: A-AFFY-2

ATBETA-AMY DOWN in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.8959020761564
p value: 0.00959101745584451
refers to: ATBETA-AMY
refers to: 245275_at
t statistic: -5.97500972424151

AT4G29700
type: EnsemblDatabaseReference

254221_at
type: EFO_0005072
part of: A-AFFY-2

245385_at
type: EFO_0005072
part of: A-AFFY-2

264338_at
type: EFO_0005072
part of: A-AFFY-2

259892_at
type: EFO_0005072
part of: A-AFFY-2

AT1G12845 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.26951155818432
p value: 0.00204387365828815
refers to: 261203_at
refers to: AT1G12845
t statistic: 9.37764010792666

ATMRU1
type: EnsemblDatabaseReference

AT2G22170
type: EnsemblDatabaseReference

PLT3
type: EnsemblDatabaseReference

252972_at
type: EFO_0005072
part of: A-AFFY-2

253874_at
type: EFO_0005072
part of: A-AFFY-2

AT4G14020
type: EnsemblDatabaseReference

261203_at
type: EFO_0005072
part of: A-AFFY-2

CYP707A1 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.68798699548239
p value: 0.00128036652509788
refers to: CYP707A1
refers to: 254562_at
t statistic: -11.2277009682181

DJ1A
type: EnsemblDatabaseReference

259375_at
type: EFO_0005072
part of: A-AFFY-2

AT2G43670
type: EnsemblDatabaseReference

CYP707A1
type: EnsemblDatabaseReference

RCI2B UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01230344679747
p value: 0.00736229566437124
refers to: RCI2B
refers to: 258751_at
t statistic: 6.26509553502197

(Sample) genotype/wild type genotype
type: EFO_0000001
property type: genotype
property value: wild type genotype

ALMT1
type: EnsemblDatabaseReference

C/VIF1
type: EnsemblDatabaseReference

PLT3
type: EnsemblDatabaseReference

AT3G13650/MMM17_4
type: EnsemblDatabaseReference

AT1G12845
type: EnsemblDatabaseReference

(Assay) GSM610375
type: Assay
has participant: A-AFFY-2

AT1G75590
type: EnsemblDatabaseReference

DJ1A DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08231400682836
p value: 0.0037580238681372
refers to: 257216_at
refers to: DJ1A
t statistic: -7.83282108138105

266799_at
type: EFO_0005072
part of: A-AFFY-2

AT2G22170 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0817640066872
p value: 0.00225994722922406
refers to: AT2G22170
refers to: 263431_at
t statistic: 9.18116533526666

DJ1A
type: EnsemblDatabaseReference

FLA9
type: EnsemblDatabaseReference

257481_at
type: EFO_0005072
part of: A-AFFY-2

(Factor value) GENOTYPE/wox4-1 mutant
type: EFO_0000001
property type: GENOTYPE
property value: wox4-1 mutant

CYP707A1
type: EnsemblDatabaseReference

263161_at
type: EFO_0005072
part of: A-AFFY-2

ALMT1 UP in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1653931552902
p value: 0.0104018334202069
refers to: ALMT1
refers to: 257481_at
t statistic: 5.8428967073551

AT2G25790
type: EnsemblDatabaseReference

AT4G30830
type: EnsemblDatabaseReference

PAP3 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.27483438327427
p value: 0.00128036652509788
refers to: PAP3
refers to: 262830_at
t statistic: -10.607220441013

ATCLH1
type: EnsemblDatabaseReference

ATBETA-AMY DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.49853271977069
p value: 0.0408872844688083
refers to: ATBETA-AMY
refers to: 245275_at
t statistic: -3.71066400566021

ALMT1
type: EnsemblDatabaseReference

C/VIF1
type: EnsemblDatabaseReference

AT4G38840
type: EnsemblDatabaseReference

AT3G13650/MMM17_4
type: EnsemblDatabaseReference

AT1G75590 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27104288378088
p value: 0.00413962068134372
refers to: AT1G75590
refers to: 262981_at
t statistic: 7.447715226338

AT1G12845
type: EnsemblDatabaseReference

AT1G75590
type: EnsemblDatabaseReference

265922_at
type: EFO_0005072
part of: A-AFFY-2

252501_at
type: EFO_0005072
part of: A-AFFY-2

AT1G65450 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.23067689084387
p value: 0.00413962068134372
refers to: 264160_at
refers to: AT1G65450
t statistic: 7.47683747612239

AT2G28780
type: EnsemblDatabaseReference

(Assay) GSM610384
type: Assay
has participant: A-AFFY-2

FLA9
type: EnsemblDatabaseReference

264160_at
type: EFO_0005072
part of: A-AFFY-2

AT4G30830
type: EnsemblDatabaseReference

AT1G54020 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.98873067004683
p value: 0.00394515841413704
refers to: AT1G54020
refers to: 263161_at
t statistic: -7.75301591042196

AT3G11930
type: EnsemblDatabaseReference

ATCLH1
type: EnsemblDatabaseReference

ATPSK2
type: EnsemblDatabaseReference

AT2G28780 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.39826493739165
p value: 0.00128036652509788
refers to: AT2G28780
refers to: 266222_at
t statistic: -10.8052520087239

PAP3
type: EnsemblDatabaseReference

ATEXLA3
type: EnsemblDatabaseReference

KUP6 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23008374695166
p value: 0.0286445600529554
refers to: KUP6
refers to: 264338_at
t statistic: -4.17510909515994

259616_at
type: EFO_0005072
part of: A-AFFY-2

GLP1 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.40311750151323
p value: 0.00128036652509788
refers to: GLP1
refers to: 259892_at
t statistic: 11.6864550744165

260693_at
type: EFO_0005072
part of: A-AFFY-2

265817_at
type: EFO_0005072
part of: A-AFFY-2

CYP78A8
type: EnsemblDatabaseReference

249727_at
type: EFO_0005072
part of: A-AFFY-2

(Factor value) ORGANISM_PART/first internode of stem
type: EFO_0000001
property type: ORGANISM_PART
property value: first internode of stem

AT2G28780
type: EnsemblDatabaseReference

253697_at
type: EFO_0005072
part of: A-AFFY-2

262981_at
type: EFO_0005072
part of: A-AFFY-2

254562_at
type: EFO_0005072
part of: A-AFFY-2

AT2G34810 DOWN in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.51514235700858
p value: 0.00102245575155908
refers to: AT2G34810
refers to: 267425_at
t statistic: -11.9146935886009

AT3G11930
type: EnsemblDatabaseReference

(Assay) GSM610381
type: Assay
has participant: A-AFFY-2

ZFHD1
type: EnsemblDatabaseReference

ATPSK2
type: EnsemblDatabaseReference

262830_at
type: EFO_0005072
part of: A-AFFY-2

E-GEOD-24781
type: microarray 1colour mrna differential
RO_0002162: Arabidopsis thaliana
description: Stem samples of wildtype Columbia plants and the wox4-1 mutant (Gabi_462G01) were analyzed in order to draw a connection between general transcriptomic changes during interfascicular formation in the wildtype and WOX4-dependent gene regulation during this process. We used microarrays to identify factors downstream of WOX4 in the formation of the interfascicular cambium. Transcriptional profiling, comparing wildtype Columbia and wox4-1 plants. RNA was extracted from 3 biological replicates per plant line and sample type (stem base, first internode), each consisting of a pool of 13-17 stem samples.
uses data from: http://identifiers.org/pubmed/21926336

TUB1
type: EnsemblDatabaseReference

PAP3
type: EnsemblDatabaseReference

264007_at
type: EFO_0005072
part of: A-AFFY-2

ATEXLA3
type: EnsemblDatabaseReference

261574_at
type: EFO_0005072
part of: A-AFFY-2

RD20 DOWN in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.26066245604157
p value: 0.0149483442335132
refers to: RD20
refers to: 255795_at
t statistic: -5.33654961232125

(Assay) GSM610376
type: Assay
has participant: A-AFFY-2

258727_at
type: EFO_0005072
part of: A-AFFY-2

259831_at
type: EFO_0005072
part of: A-AFFY-2

AT2G47010 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21517673153046
p value: 0.00413962068134372
refers to: 266738_at
refers to: AT2G47010
t statistic: 7.37532256291887

JAL23 DOWN in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1265630643603
p value: 0.00102245575155908
refers to: 266989_at
refers to: JAL23
t statistic: -10.7891083987534

266222_at
type: EFO_0005072
part of: A-AFFY-2

(Assay) GSM610380
type: Assay
has participant: A-AFFY-2

CYP78A8
type: EnsemblDatabaseReference

254818_at
type: EFO_0005072
part of: A-AFFY-2

ZFHD1 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12401314758725
p value: 0.00413962068134372
refers to: ZFHD1
refers to: 259831_at
t statistic: -7.42275731784557

AT4G14020 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01398158116837
p value: 0.0259382084759532
refers to: 245385_at
refers to: AT4G14020
t statistic: -4.33580537432492

252557_at
type: EFO_0005072
part of: A-AFFY-2

SAUR68 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.44722980910995
p value: 0.00128036652509788
refers to: 259783_at
refers to: SAUR68
t statistic: 12.106829218616

AT1G54020
type: EnsemblDatabaseReference

265066_at
type: EFO_0005072
part of: A-AFFY-2

ZFHD1
type: EnsemblDatabaseReference

ATEXLA3 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04566873458696
p value: 0.0320592353250195
refers to: 252557_at
refers to: ATEXLA3
t statistic: 4.03568912727001

258751_at
type: EFO_0005072
part of: A-AFFY-2

TUB1
type: EnsemblDatabaseReference

SAUR68
type: EnsemblDatabaseReference

(Assay) GSM610374
type: Assay
has participant: A-AFFY-2

AT4G27450 DOWN in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01969449107393
p value: 0.00185711679268417
refers to: AT4G27450
refers to: 253874_at
t statistic: -9.57858415132928

JAL23
type: EnsemblDatabaseReference

AT4G23820 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03774650574891
p value: 0.00128036652509788
refers to: AT4G23820
refers to: 254221_at
t statistic: 10.4391779803902

MEE3 UP in 'wox4-1 mutant' vs 'wild type' in 'base of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01897451206808
p value: 0.0144252096153634
refers to: MEE3
refers to: 263549_at
t statistic: 5.29904035306564

AT3G46880 UP in 'wox4-1 mutant' vs 'wild type' in 'first internode of stem'
type: IncreasedDifferentialExpressionRatio
fold change: 1.05481235147308
p value: 0.00144711856425834
refers to: AT3G46880
refers to: 252501_at
t statistic: 9.42960660096552