264401_at
type: EFO_0005072
part of: A-AFFY-2

AT1G73610
type: EnsemblDatabaseReference

AT4G11000
type: EnsemblDatabaseReference

UBC17
type: EnsemblDatabaseReference

IAA31 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0772553
p value: 0.00345626432693595
refers to: IAA31
refers to: 258352_at
t statistic: -8.84458449409483

264610_at
type: EFO_0005072
part of: A-AFFY-2

LCR24 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.35301573333333
p value: 0.00107782747773055
refers to: LCR24
refers to: 253724_at
t statistic: -12.4453198496259

(Assay) GSM545851
type: Assay
has participant: A-AFFY-2

(Sample) developmental stage/pollinated stage 14-15 flowers
type: EFO_0000001
property type: developmental stage
property value: pollinated stage 14-15 flowers

AT1G72060 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1831699
p value: 0.015855936687094
refers to: AT1G72060
refers to: 256337_at
t statistic: -5.09613656809376

CYP83A1
type: EnsemblDatabaseReference

(Sample) organism/Arabidopsis thaliana
type: Arabidopsis thaliana
property type: organism
property value: Arabidopsis thaliana

JAL23 UP in 'pop2-1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03595873333333
p value: 0.0262501211258763
refers to: JAL23
refers to: 266989_at
t statistic: 4.32926040883739

RALFL18
type: EnsemblDatabaseReference

249955_at
type: EFO_0005072
part of: A-AFFY-2

266989_at
type: EFO_0005072
part of: A-AFFY-2

AT4G35725
type: EnsemblDatabaseReference

AT1G29660
type: EnsemblDatabaseReference

LSU1
type: EnsemblDatabaseReference

AT2G38900
type: EnsemblDatabaseReference

AT2G24160
type: EnsemblDatabaseReference

GRXS9
type: EnsemblDatabaseReference

AT3G60420
type: EnsemblDatabaseReference

Arabidopsis thaliana
type: OBI_0100026

Analysis of 'pop2-1 mutant' vs 'wild type'
type: MicroarrayDifferentialExpressionAnalysis

PNP-A
type: EnsemblDatabaseReference

257623_at
type: EFO_0005072
part of: A-AFFY-2

JAL23
type: EnsemblDatabaseReference

ATPSK4
type: EnsemblDatabaseReference

AT4G28085
type: EnsemblDatabaseReference

AT3G49270
type: EnsemblDatabaseReference

AT4G27450
type: EnsemblDatabaseReference

263549_at
type: EFO_0005072
part of: A-AFFY-2

255302_at
type: EFO_0005072
part of: A-AFFY-2

CYP83A1
type: EnsemblDatabaseReference

PYD4 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.60031503333333
p value: 0.00746551879338926
refers to: 258983_at
refers to: PYD4
t statistic: -6.74686577300071

BGL2
type: EnsemblDatabaseReference

BCAT4 UP in 'pop2-1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15843173333333
p value: 0.0187784876357169
refers to: BCAT4
refers to: 257021_at
t statistic: 4.81548549712737

RALFL18
type: EnsemblDatabaseReference

GAMT2
type: EnsemblDatabaseReference

AT1G56100
type: EnsemblDatabaseReference

AT4G10500 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0085696
p value: 0.00942853472520395
refers to: AT4G10500
refers to: 254975_at
t statistic: -5.96270082443437

AT4G35725
type: EnsemblDatabaseReference

AT1G29660
type: EnsemblDatabaseReference

AT2G38900
type: EnsemblDatabaseReference

266169_at
type: EFO_0005072
part of: A-AFFY-2

UGT75C1
type: EnsemblDatabaseReference

AT3G60420
type: EnsemblDatabaseReference

252234_at
type: EFO_0005072
part of: A-AFFY-2

(Factor value) GENOTYPE/wild type genotype
type: EFO_0000001
property type: GENOTYPE
property value: wild type genotype

AT5G25440 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.07082716666667
p value: 0.0059056149181676
refers to: AT5G25440
refers to: 246943_at
t statistic: -7.18421221570898

AT3G02670 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.24487746666667
p value: 0.011407297118201
refers to: 258490_at
refers to: AT3G02670
t statistic: -5.61727593180516

AT3G49270
type: EnsemblDatabaseReference

AT1G72060
type: EnsemblDatabaseReference

AT4G16000
type: EnsemblDatabaseReference

AT4G27450
type: EnsemblDatabaseReference

256589_at
type: EFO_0005072
part of: A-AFFY-2

255345_at
type: EFO_0005072
part of: A-AFFY-2

BGL2
type: EnsemblDatabaseReference

GAMT2
type: EnsemblDatabaseReference

AT1G56100
type: EnsemblDatabaseReference

IAA31
type: EnsemblDatabaseReference

HB-5 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00236596666667
p value: 0.0213634014922669
refers to: 246279_at
refers to: HB-5
t statistic: -4.61008293665849

257021_at
type: EFO_0005072
part of: A-AFFY-2

UGT75C1
type: EnsemblDatabaseReference

245353_at
type: EFO_0005072
part of: A-AFFY-2

ATGSTF12
type: EnsemblDatabaseReference

AT4G16000 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0463287
p value: 0.0166295876624046
refers to: AT4G16000
refers to: 245353_at
t statistic: -5.01209469558427

248676_at
type: EFO_0005072
part of: A-AFFY-2

253827_at
type: EFO_0005072
part of: A-AFFY-2

266563_at
type: EFO_0005072
part of: A-AFFY-2

AT1G09370 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.222978
p value: 0.00453598040020542
refers to: AT1G09370
refers to: 264500_at
t statistic: -8.01393058270263

253724_at
type: EFO_0005072
part of: A-AFFY-2

AT1G72060
type: EnsemblDatabaseReference

260066_at
type: EFO_0005072
part of: A-AFFY-2

MEE23 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1980071
p value: 0.0213634014922669
refers to: 267414_at
refers to: MEE23
t statistic: -4.60830679096135

(Sample) biosource provider/Ravishankar Palanivelu
type: EFO_0000001
property type: biosource provider
property value: Ravishankar Palanivelu

AT4G16000
type: EnsemblDatabaseReference

CYP81D1
type: EnsemblDatabaseReference

ATSDI1 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.6747245
p value: 0.00904937337103067
refers to: ATSDI1
refers to: 248676_at
t statistic: -6.06705789258973

AT3G24510
type: EnsemblDatabaseReference

BAN
type: EnsemblDatabaseReference

MEE3
type: EnsemblDatabaseReference

TAT3
type: EnsemblDatabaseReference

AT4G28085 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0088565
p value: 0.031784378065959
refers to: AT4G28085
refers to: 253827_at
t statistic: -4.10629396370614

MEE3 UP in 'pop2-1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2197319
p value: 0.00453598040020542
refers to: 263549_at
refers to: MEE3
t statistic: 7.80866069538911

IAA31
type: EnsemblDatabaseReference

LSU1 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.37240176666667
p value: 0.0235873438274084
refers to: 252269_at
refers to: LSU1
t statistic: -4.48510897270412

BGLU28
type: EnsemblDatabaseReference

ATGSTF12
type: EnsemblDatabaseReference

ATMSRB5
type: EnsemblDatabaseReference

254232_at
type: EFO_0005072
part of: A-AFFY-2

251400_at
type: EFO_0005072
part of: A-AFFY-2

267414_at
type: EFO_0005072
part of: A-AFFY-2

250083_at
type: EFO_0005072
part of: A-AFFY-2

AT3G13950 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12466833333333
p value: 0.0280528023383638
refers to: 258203_at
refers to: AT3G13950
t statistic: -4.25427423446996

GASA11 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10689746666667
p value: 0.0259122039785453
refers to: GASA11
refers to: 265331_at
t statistic: -4.34941327113081

245275_at
type: EFO_0005072
part of: A-AFFY-2

AT4G11890
type: EnsemblDatabaseReference

PNP-A DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.0713375
p value: 6.38673394123501E-4
refers to: PNP-A
refers to: 266070_at
t statistic: -13.6449829439759

BCAT4
type: EnsemblDatabaseReference

CYP81D1
type: EnsemblDatabaseReference

246943_at
type: EFO_0005072
part of: A-AFFY-2

AT4G27450 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2566939
p value: 0.0421552620242053
refers to: 253874_at
refers to: AT4G27450
t statistic: -3.71970587728149

AT4G10500
type: EnsemblDatabaseReference

(Assay) GSM545853
type: Assay
has participant: A-AFFY-2

ATBETA-AMY
type: EnsemblDatabaseReference

BAN
type: EnsemblDatabaseReference

ATH8
type: EnsemblDatabaseReference

264500_at
type: EFO_0005072
part of: A-AFFY-2

MEE3
type: EnsemblDatabaseReference

TAT3
type: EnsemblDatabaseReference

HSP70
type: EnsemblDatabaseReference

262128_at
type: EFO_0005072
part of: A-AFFY-2

HB-5
type: EnsemblDatabaseReference

AT1G73610 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.0033206
p value: 0.00345626432693595
refers to: 260066_at
refers to: AT1G73610
t statistic: -8.82334780632668

BGLU28
type: EnsemblDatabaseReference

ARR22 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.860927
p value: 6.35855137352285E-4
refers to: 258590_at
refers to: ARR22
t statistic: -13.9940188464479

252269_at
type: EFO_0005072
part of: A-AFFY-2

ATMSRB5
type: EnsemblDatabaseReference

(Factor value) GENOTYPE/pop2-1 mutant
type: EFO_0000001
property type: GENOTYPE
property value: pop2-1 mutant

AGL87
type: EnsemblDatabaseReference

ATSDI1
type: EnsemblDatabaseReference

262528_at
type: EFO_0005072
part of: A-AFFY-2

254869_at
type: EFO_0005072
part of: A-AFFY-2

AT1G52690
type: EnsemblDatabaseReference

SCRL6
type: EnsemblDatabaseReference

AT4G11890
type: EnsemblDatabaseReference

CYP71B23
type: EnsemblDatabaseReference

245624_at
type: EFO_0005072
part of: A-AFFY-2

BCAT4
type: EnsemblDatabaseReference

UGT75C1 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5441471
p value: 0.00265611804044309
refers to: UGT75C1
refers to: 245624_at
t statistic: -9.94169946483494

AT4G10500
type: EnsemblDatabaseReference

AT3G02670
type: EnsemblDatabaseReference

248011_at
type: EFO_0005072
part of: A-AFFY-2

258490_at
type: EFO_0005072
part of: A-AFFY-2

BAN DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.6827883
p value: 0.00371026720443289
refers to: 264401_at
refers to: BAN
t statistic: -8.55565705664187

ATBETA-AMY
type: EnsemblDatabaseReference

ATH8
type: EnsemblDatabaseReference

AT2G43620
type: EnsemblDatabaseReference

HSP70
type: EnsemblDatabaseReference

AT2G38900 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.79208703333333
p value: 0.00751853290467079
refers to: AT2G38900
refers to: 266169_at
t statistic: -6.72649873406032

BSMT1 UP in 'pop2-1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.78212286666667
p value: 0.0018426293246098
refers to: 259286_at
refers to: BSMT1
t statistic: 11.1723881103393

HB-5
type: EnsemblDatabaseReference

ARR22
type: EnsemblDatabaseReference

AT1G09370
type: EnsemblDatabaseReference

CORI3
type: EnsemblDatabaseReference

BGLU28 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13892783333333
p value: 0.0187784876357169
refers to: BGLU28
refers to: 267389_at
t statistic: -4.81404663833469

GRXS9 UP in 'pop2-1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.52442256666667
p value: 5.30752750755732E-4
refers to: 267497_at
refers to: GRXS9
t statistic: 14.8382055664228

252306_at
type: EFO_0005072
part of: A-AFFY-2

A-AFFY-2
type: EFO_0000269

AHA10
type: EnsemblDatabaseReference

CORI3 UP in 'pop2-1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.029571
p value: 0.00584942629302801
refers to: CORI3
refers to: 254232_at
t statistic: 7.21137967131833

AGL87
type: EnsemblDatabaseReference

ATSDI1
type: EnsemblDatabaseReference

(Sample) organism part/flowers
type: EFO_0001024
property type: organism part
property value: flowers

AT1G52690
type: EnsemblDatabaseReference

SCRL6
type: EnsemblDatabaseReference

AHA10 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.61387436666667
p value: 0.00784005642852143
refers to: AHA10
refers to: 262528_at
t statistic: -6.65477902957776

AT3G24510 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.34819016666667
p value: 0.0324720545188877
refers to: AT3G24510
refers to: 258130_at
t statistic: -4.07799548359468

265993_at
type: EFO_0005072
part of: A-AFFY-2

CYP71B23
type: EnsemblDatabaseReference

BGL2 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.45770763333333
p value: 0.0107908857880204
refers to: 251625_at
refers to: BGL2
t statistic: -5.73951624902646

(Assay) GSM545860
type: Assay
has participant: A-AFFY-2

AT4G11000 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.07908526666666
p value: 0.0192450732076882
refers to: AT4G11000
refers to: 254948_at
t statistic: -4.78167427028724

(Assay) GSM545854
type: Assay
has participant: A-AFFY-2

AT5G18840 UP in 'pop2-1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.71284346666667
p value: 3.97027326193674E-4
refers to: 249955_at
refers to: AT5G18840
t statistic: 18.4960288526575

(Sample) genotype/wild type genotype
type: EFO_0000001
property type: genotype
property value: wild type genotype

AT3G02670
type: EnsemblDatabaseReference

256337_at
type: EFO_0005072
part of: A-AFFY-2

AT1G56100 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.19573143333333
p value: 0.0473743760733171
refers to: AT1G56100
refers to: 262083_at
t statistic: -3.58275763956846

267497_at
type: EFO_0005072
part of: A-AFFY-2

AT2G43620
type: EnsemblDatabaseReference

253874_at
type: EFO_0005072
part of: A-AFFY-2

ATPSK4 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.31959356666667
p value: 0.00858786923453033
refers to: ATPSK4
refers to: 252234_at
t statistic: -6.32728157339984

ARR22
type: EnsemblDatabaseReference

AT1G09370
type: EnsemblDatabaseReference

AT3G49270 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.82669463333333
p value: 0.00636077736484239
refers to: AT3G49270
refers to: 252306_at
t statistic: -7.06189083025585

CORI3
type: EnsemblDatabaseReference

AHA10
type: EnsemblDatabaseReference

CYP81D1 UP in 'pop2-1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10864833333333
p value: 0.00453598040020542
refers to: 256589_at
refers to: CYP81D1
t statistic: 7.9097365226646

258352_at
type: EFO_0005072
part of: A-AFFY-2

GAMT2 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03327166666667
p value: 0.00815239443932105
refers to: GAMT2
refers to: 248011_at
t statistic: -6.51250218697527

PYD4
type: EnsemblDatabaseReference

260408_at
type: EFO_0005072
part of: A-AFFY-2

AtOCT1 UP in 'pop2-1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.56143133333333
p value: 0.00225496267012187
refers to: AtOCT1
refers to: 260097_at
t statistic: 10.5897398333416

262083_at
type: EFO_0005072
part of: A-AFFY-2

AT5G18840
type: EnsemblDatabaseReference

260556_at
type: EFO_0005072
part of: A-AFFY-2

HSP70 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.046764
p value: 0.0187784876357169
refers to: 256245_at
refers to: HSP70
t statistic: -4.81650237935141

CYP83A1 UP in 'pop2-1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13913273333333
p value: 0.00353135126954501
refers to: CYP83A1
refers to: 254687_at
t statistic: 8.72463115505329

261942_at
type: EFO_0005072
part of: A-AFFY-2

ENODL11 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01443896666667
p value: 0.00967138404662141
refers to: ENODL11
refers to: 266563_at
t statistic: -5.89439705943562

AtOCT1
type: EnsemblDatabaseReference

AT2G43620 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1220981
p value: 0.00645434918601886
refers to: AT2G43620
refers to: 260556_at
t statistic: -6.97205483826249

MEE23
type: EnsemblDatabaseReference

APA3
type: EnsemblDatabaseReference

ATMSRB5 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.18771853333333
p value: 0.0111836919448565
refers to: ATMSRB5
refers to: 255302_at
t statistic: -5.65456079093539

RALFL18 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0911119
p value: 0.0016354651832522
refers to: RALFL18
refers to: 245158_at
t statistic: -11.5425266571298

267389_at
type: EFO_0005072
part of: A-AFFY-2

LCR24
type: EnsemblDatabaseReference

AGL87 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01859493333333
p value: 0.00419301078109369
refers to: AGL87
refers to: 261942_at
t statistic: -8.21437344206676

246279_at
type: EFO_0005072
part of: A-AFFY-2

265331_at
type: EFO_0005072
part of: A-AFFY-2

AT4G11890 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.43981056666667
p value: 0.016618399072475
refers to: AT4G11890
refers to: 254869_at
t statistic: -5.0237181386862

PYD4
type: EnsemblDatabaseReference

GASA11
type: EnsemblDatabaseReference

AT3G13950
type: EnsemblDatabaseReference

AT4G15750
type: EnsemblDatabaseReference

AT5G18840
type: EnsemblDatabaseReference

BSMT1
type: EnsemblDatabaseReference

AT5G25440
type: EnsemblDatabaseReference

AtOCT1
type: EnsemblDatabaseReference

MEE23
type: EnsemblDatabaseReference

APA3
type: EnsemblDatabaseReference

AT3G24510
type: EnsemblDatabaseReference

CYP71B23 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.543265
p value: 0.00912608082895086
refers to: CYP71B23
refers to: 257623_at
t statistic: -6.03713783449738

(Assay) GSM545852
type: Assay
has participant: A-AFFY-2

AT3G60420 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01883016666667
p value: 0.00867709566552319
refers to: AT3G60420
refers to: 251400_at
t statistic: -6.13298744183545

245371_at
type: EFO_0005072
part of: A-AFFY-2

AT1G04645
type: EnsemblDatabaseReference

AT4G15750 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.52614913333333
p value: 0.00300124647516382
refers to: 245371_at
refers to: AT4G15750
t statistic: -9.21671274840983

LCR24
type: EnsemblDatabaseReference

258983_at
type: EFO_0005072
part of: A-AFFY-2

GASA11
type: EnsemblDatabaseReference

(Sample) genotype/pop2-1 mutant
type: EFO_0000001
property type: genotype
property value: pop2-1 mutant

AT3G13950
type: EnsemblDatabaseReference

AT4G15750
type: EnsemblDatabaseReference

BSMT1
type: EnsemblDatabaseReference

ATBETA-AMY UP in 'pop2-1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0266126
p value: 0.015855936687094
refers to: ATBETA-AMY
refers to: 245275_at
t statistic: 5.09462716932015

ATH8 UP in 'pop2-1 mutant' vs 'wild type'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15360233333333
p value: 0.00366974712986376
refers to: 260408_at
refers to: ATH8
t statistic: 8.61356480091024

AT5G25440
type: EnsemblDatabaseReference

E-GEOD-21945
type: microarray 1colour mrna differential
RO_0002162: Arabidopsis thaliana
description: Although two genes responsive to GABA were characterized previously in plants (Kathiresan et al 1997), a comprehensive study in reproductive and vegetative tissues has not been performed. Consequently, genes that mediate GABA response in plants remain unknown. We therefore used microarrays to survey the genome, identifying genes modulated in response to GABA in reproductive tissues. Flowers were collected as described in the protocols section for RNA extraction and hybridization on Affymetrix ATH1 Genechip microarrays. Gene expression in wild-type and pop2-1 mutant flowers containing high levels of endogenous GABA were compared.
uses data from: pubmed

ATGSTF12 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.51327516666667
p value: 0.00371026720443289
refers to: ATGSTF12
refers to: 250083_at
t statistic: -8.51862913791066

AT5MAT DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.20151873333333
p value: 0.00290358124653553
refers to: AT5MAT
refers to: 256924_at
t statistic: -9.32132964594715

UBC17 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06253466666666
p value: 0.0173070020250261
refers to: 246195_at
refers to: UBC17
t statistic: -4.94261258718679

253164_at
type: EFO_0005072
part of: A-AFFY-2

(Assay) GSM545850
type: Assay
has participant: A-AFFY-2

AT1G04645
type: EnsemblDatabaseReference

AT1G52690 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.39885163333333
p value: 0.00641110329207545
refers to: 262128_at
refers to: AT1G52690
t statistic: -7.01749585042639

AT1G04645 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -2.04364986666667
p value: 0.00265611804044309
refers to: 264610_at
refers to: AT1G04645
t statistic: -9.89385555500698

254687_at
type: EFO_0005072
part of: A-AFFY-2

ENODL11
type: EnsemblDatabaseReference

246195_at
type: EFO_0005072
part of: A-AFFY-2

260097_at
type: EFO_0005072
part of: A-AFFY-2

256245_at
type: EFO_0005072
part of: A-AFFY-2

259286_at
type: EFO_0005072
part of: A-AFFY-2

AT1G73610
type: EnsemblDatabaseReference

AT4G11000
type: EnsemblDatabaseReference

UBC17
type: EnsemblDatabaseReference

AT5MAT
type: EnsemblDatabaseReference

AT2G24160 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0375965
p value: 0.00685047976104703
refers to: 265993_at
refers to: AT2G24160
t statistic: -6.87855358848309

266070_at
type: EFO_0005072
part of: A-AFFY-2

258130_at
type: EFO_0005072
part of: A-AFFY-2

258203_at
type: EFO_0005072
part of: A-AFFY-2

258590_at
type: EFO_0005072
part of: A-AFFY-2

251625_at
type: EFO_0005072
part of: A-AFFY-2

SCRL6 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14209393333333
p value: 0.0205143366175331
refers to: SCRL6
refers to: 259726_at
t statistic: -4.67936847612338

AT4G35725 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.45502873333333
p value: 0.0205143366175331
refers to: AT4G35725
refers to: 253164_at
t statistic: -4.67878251637453

LSU1
type: EnsemblDatabaseReference

GRXS9
type: EnsemblDatabaseReference

AT2G24160
type: EnsemblDatabaseReference

263539_at
type: EFO_0005072
part of: A-AFFY-2

254948_at
type: EFO_0005072
part of: A-AFFY-2

AT1G29660 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3783061
p value: 0.0185775035720654
refers to: AT1G29660
refers to: 259786_at
t statistic: -4.84631320838261

APA3 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22609746666667
p value: 0.0132982806273518
refers to: APA3
refers to: 255345_at
t statistic: -5.33809935337946

(Sample) ecotype/Ler
type: EFO_0005154
property type: ecotype
property value: Ler

259786_at
type: EFO_0005072
part of: A-AFFY-2

PNP-A
type: EnsemblDatabaseReference

245158_at
type: EFO_0005072
part of: A-AFFY-2

ENODL11
type: EnsemblDatabaseReference

256924_at
type: EFO_0005072
part of: A-AFFY-2

JAL23
type: EnsemblDatabaseReference

254975_at
type: EFO_0005072
part of: A-AFFY-2

TAT3 DOWN in 'pop2-1 mutant' vs 'wild type'
type: DecreasedDifferentialExpressionRatio
fold change: -1.43635863333333
p value: 0.00353135126954501
refers to: 263539_at
refers to: TAT3
t statistic: -8.70425233947292

ATPSK4
type: EnsemblDatabaseReference

259726_at
type: EFO_0005072
part of: A-AFFY-2

AT4G28085
type: EnsemblDatabaseReference

AT5MAT
type: EnsemblDatabaseReference