affy_meja_arabidopsis - We want to determine if the presence of C2 modifies the cell transcriptome and its response to methyl jasmonate. Comparison of control lines and transgenic lines expressing C2 in basal conditions and after treatment with 50uM MeJA for 10 hours. C2 lines are expressing geminivirus C2 under a 35S promoter. PR1-LUC have a luciferase transgene under the control of the promoter of PR1; since the plants are not induced, these are the control plants (resistant to kanamycin, but not expressing anything else) Keywords: gene knock in (transgenic),treated vs untreated comparison 12 arrays - ATH1
AT4G17470 DOWN in '35S::C2' vs 'control' in 'no compound'
AT4G38860 DOWN in '35S::C2' vs 'control' in 'no compound'
DTXL1 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
AT4G07820 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
PER47 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
ACD6 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
ATEXT4 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
scpl30 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT2G25510 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
APS3 DOWN in '35S::C2' vs 'control' in 'no compound'
AT3G58550 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT2G32020 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
LSU1 DOWN in '35S::C2' vs 'control' in 'no compound'
ERF035 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT5G53480 DOWN in '35S::C2' vs 'control' in 'no compound'
BGL2 DOWN in '35S::C2' vs 'control' in 'no compound'
WRKY54 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT1G04770 DOWN in '35S::C2' vs 'control' in 'no compound'
ALPHA-TIP UP in '35S::C2' vs 'control' in 'no compound'
ATGSTF12 UP in '35S::C2' vs 'control' in 'no compound'
ATGSTU4 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
ELI3-2 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
WAXY UP in '35S::C2' vs 'control' in 'methyl jasmonate'
AT4G29270 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
CYP81F4 DOWN in '35S::C2' vs 'control' in 'no compound'
AT5G03350 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
ALPHA-DOX1 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
LOX2 DOWN in '35S::C2' vs 'control' in 'no compound'
LTP8 DOWN in '35S::C2' vs 'control' in 'no compound'
IRT1 UP in '35S::C2' vs 'control' in 'no compound'
AT3G52360 DOWN in '35S::C2' vs 'control' in 'no compound'
AT2G41990 UP in '35S::C2' vs 'control' in 'no compound'
NRT1.8 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
TRI UP in '35S::C2' vs 'control' in 'methyl jasmonate'
IRT1 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
AT4G16260 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT1G66800 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT5G03350 DOWN in '35S::C2' vs 'control' in 'no compound'
UGT78D1 DOWN in '35S::C2' vs 'control' in 'no compound'
SHM7 DOWN in '35S::C2' vs 'control' in 'no compound'
BGL2 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
UGT72E2 DOWN in '35S::C2' vs 'control' in 'no compound'
PDF2.1 DOWN in '35S::C2' vs 'control' in 'no compound'
AT3G57930 DOWN in '35S::C2' vs 'control' in 'no compound'
CML41 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
CML10 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
UGT73B1 DOWN in '35S::C2' vs 'control' in 'no compound'
HSP17.6C DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT1G21100 DOWN in '35S::C2' vs 'control' in 'no compound'
SEN1 UP in '35S::C2' vs 'control' in 'no compound'
Analysis of '35S::C2' vs 'control' in 'no compound'
(Factor value) COMPOUND/methyl jasmonate
MLP329 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
ATEXPB3 DOWN in '35S::C2' vs 'control' in 'no compound'
HR4 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
MRN1 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT2G40460 DOWN in '35S::C2' vs 'control' in 'no compound'
AT2G16005 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT3G15650 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
AT2G33850 DOWN in '35S::C2' vs 'control' in 'no compound'
AT5G47950 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
ANAC019 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
CHI DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT1G67750 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
ATSDI1 DOWN in '35S::C2' vs 'control' in 'no compound'
SAG13 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
UGT76E11 DOWN in '35S::C2' vs 'control' in 'no compound'
AT4G22610 DOWN in '35S::C2' vs 'control' in 'no compound'
AIG1 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
MLP329 DOWN in '35S::C2' vs 'control' in 'no compound'
AT3G26460 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
GASA6 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
ACC2 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
AT3G45730 UP in '35S::C2' vs 'control' in 'no compound'
LAL5 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
MIOX2 UP in '35S::C2' vs 'control' in 'no compound'
AT1G06100 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
ATCSLA01 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
ASN1 UP in '35S::C2' vs 'control' in 'no compound'
ATEXPA15 DOWN in '35S::C2' vs 'control' in 'no compound'
ATRLP40 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT1G29660 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
AT3G04210 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
MLP34 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AtGH9B8 DOWN in '35S::C2' vs 'control' in 'no compound'
UGT76E12 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
XBAT34 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
ZFP5 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
WAK1 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
NDB4 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
APR1 DOWN in '35S::C2' vs 'control' in 'no compound'
AT1G73040 UP in '35S::C2' vs 'control' in 'no compound'
Analysis of '35S::C2' vs 'control' in 'methyl jasmonate'
AT4G14060 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT3G45710 DOWN in '35S::C2' vs 'control' in 'no compound'
PNP-A DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
MLP328 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT5G23840 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
LTP8 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
ATPF DOWN in '35S::C2' vs 'control' in 'no compound'
TAT3 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
MLP34 DOWN in '35S::C2' vs 'control' in 'no compound'
AT1G67865 DOWN in '35S::C2' vs 'control' in 'no compound'
AT3G45730 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
AT5G12050 DOWN in '35S::C2' vs 'control' in 'no compound'
LURP1 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
DIN11 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
ATKTI1 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
HSP17.6II DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT3G16530 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
RPS18 DOWN in '35S::C2' vs 'control' in 'no compound'
PER21 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
AT3G28220 DOWN in '35S::C2' vs 'control' in 'no compound'
ATPRB1 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT2G16660 DOWN in '35S::C2' vs 'control' in 'no compound'
PR1 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT3G22570 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT3G51660 DOWN in '35S::C2' vs 'control' in 'no compound'
AT4G22212 DOWN in '35S::C2' vs 'control' in 'no compound'
CYP89A5 DOWN in '35S::C2' vs 'control' in 'no compound'
AT2G19970 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
AtGolS4 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT2G41730 UP in '35S::C2' vs 'control' in 'methyl jasmonate'
AT3G60420 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
PR5 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT1G10585 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
PAD3 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
ATAGP30 DOWN in '35S::C2' vs 'control' in 'no compound'
AT1G21100 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
AT1G64590 DOWN in '35S::C2' vs 'control' in 'methyl jasmonate'
BAP1 DOWN in '35S::C2' vs 'control' in 'no compound'