C2H2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
CAF1-9 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G05340 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G05940 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AtGolS2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ENODL8 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
MERI5B UP in 'isoxaben treated' vs 'methanol treated (control)'
STZ UP in 'isoxaben treated' vs 'methanol treated (control)'
ATXTH18 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT4G27280 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G35290 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
WRKY40 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT5G43520 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G72900 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT3G10040 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
HSP17.6B UP in 'isoxaben treated' vs 'methanol treated (control)'
Prx37 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PMZ UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATBCB UP in 'isoxaben treated' vs 'methanol treated (control)'
AT1G32920 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
HRE2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G36220 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G18950 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G58420 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ANAC091 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
BAP1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
HMT-1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
GT2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G30500 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ACS6 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G44500 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G36500 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
FLA16 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
MIOX2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G30930 UP in 'isoxaben treated' vs 'methanol treated (control)'
RALFL28 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G22470 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G20860 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AOC3 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G33560 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ACS11 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PTI13 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G38410 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
DIC2 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT2G16660 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G20860 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT1G66180 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AtGH9B5 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT1G21100 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT4G34150 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
MYB15 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT2G27500 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PLT6 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATEXLA2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATPMEPCRB UP in 'thaxtomin A treated' vs 'methanol treated (control)'
BME3-ZF UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATEXPA12 UP in 'isoxaben treated' vs 'methanol treated (control)'
ERF013 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT1G64160 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G18740 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PHI-1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATEXLA3 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
GATL10 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
Transcriptional profiling after inhibition of cellulose synthesis by thaxtomin A and isoxaben in Arabidopsis thaliana suspension cells; Perturbations in the cellulose content of the plant cell wall lead to global modifications in cellular homeostasis, as seen in cellulose synthase mutants or after inhibiting cellulose synthesis. In particular, application of inhibitors of cellulose synthesis such as thaxtomin A (TA) and isoxaben (IXB) initiates a programmed cell death (PCD) in Arabidopsis thaliana suspension cells that is dependent on de novo gene transcription. To further understand how TA and IXB activate PCD, a whole genome microarray analysis was performed on mRNA isolated from Arabidopsis suspension cells exposed to TA and IXB. More than 75% of the genes upregulated by TA were also upregulated by IXB, including genes encoding cell wall-related and calcium-binding proteins, defence/stress-related transcription factors, signalling components and cell death-related proteins. Comparisons with published transcriptional analyses revealed an important subset of genes generally induced in response to various biotic and abiotic stress. Experiment Overall Design: TA, IXB and methanol (control) were added to Arabidopsis thaliana suspension cells three days after sub-culture. Cells were harvested for RNA isolation and frozen in liquid nitrogen after 6 hours of contact with the inhibitors. Samples consisted of four replicates for each condition. A total of 12 Affymetrix GeneChipsÃÂÃÂ® were used in this study, which correspond to 12 RNA samples from the four biological replicates for each of the TA, IXB or methanol addition.
DREB26 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT3G57450 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ZAR1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G27450 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G27652 UP in 'isoxaben treated' vs 'methanol treated (control)'
LOX4 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
SAG20 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PME34 UP in 'isoxaben treated' vs 'methanol treated (control)'
TCH3 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
J8 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G35110 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
CYP83B1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G66180 UP in 'isoxaben treated' vs 'methanol treated (control)'
PG2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
4CL1 UP in 'isoxaben treated' vs 'methanol treated (control)'
DIC2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
TET9 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT2G34930 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
STR17 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G39110 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
SAP6 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G35290 UP in 'isoxaben treated' vs 'methanol treated (control)'
ATEXLA1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
TPPD UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATBCA4 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
BEN1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ACS6 UP in 'isoxaben treated' vs 'methanol treated (control)'
LTI29 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G15120 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
RHA3B UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ERF022 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PUB23 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G23120 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT3G29970 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
RAV2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G20520 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G29780 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
RCAR1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
COBL8 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ERF022 UP in 'isoxaben treated' vs 'methanol treated (control)'
AZF2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G27500 UP in 'isoxaben treated' vs 'methanol treated (control)'
MYB15 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G39650 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
XTR6 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G72430 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G24600 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
BCS1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
BGLU46 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATPMEPCRB UP in 'isoxaben treated' vs 'methanol treated (control)'
SAG21 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G19530 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G63840 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G27652 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
cycp3;1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G17620 UP in 'isoxaben treated' vs 'methanol treated (control)'
CCR2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
UCP5 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G30930 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G13340 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT3G46600 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AGP2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
TIFY10A UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G30500 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT3G23170 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PYL7 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT3G15450 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G36500 UP in 'isoxaben treated' vs 'methanol treated (control)'
NHL3 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
TCH3 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT2G38870 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATEXLA3 UP in 'isoxaben treated' vs 'methanol treated (control)'
ADT4 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G22470 UP in 'isoxaben treated' vs 'methanol treated (control)'
anac042 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
MERI5B UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AGP18 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT2G32190 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
HIR3 UP in 'isoxaben treated' vs 'methanol treated (control)'
XTR6 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT5G13190 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
HSP17.6II UP in 'isoxaben treated' vs 'methanol treated (control)'
AT2G01300 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT1G61890 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G32030 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT1G14480 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
SZF1 UP in 'isoxaben treated' vs 'methanol treated (control)'
CCoAOMT1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATGSTF8 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
CML16 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
HSPRO1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATXTH19 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G20142 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ERD6 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
BME3-ZF UP in 'isoxaben treated' vs 'methanol treated (control)'
AT2G41640 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G37750 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ACS7 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G44130 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AGP18 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATCWINV1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATEXT4 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
WRKY33 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT4G39675 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
WRKY46 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
Analysis of 'isoxaben treated' vs 'methanol treated (control)'
AT1G44130 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT4G02170 UP in 'isoxaben treated' vs 'methanol treated (control)'
PHI-1 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT4G02170 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
Analysis of 'thaxtomin A treated' vs 'methanol treated (control)'
ATEXPA12 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G33055 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT5G41800 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATPK19 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
HIR2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G21100 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATL41 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PSK1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
SZF1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G01300 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
XTR7 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATCNGC13 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
4CL1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATGSTU11 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G72430 UP in 'isoxaben treated' vs 'methanol treated (control)'
MAPKKK16 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
SDR2A UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G17620 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G51620 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT3G60420 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT5G19110 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT5G13190 UP in 'isoxaben treated' vs 'methanol treated (control)'
ATEXLA2 UP in 'isoxaben treated' vs 'methanol treated (control)'
WRKY46 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT3G02800 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ERF054 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATCNGC19 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
sks9 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G05340 UP in 'isoxaben treated' vs 'methanol treated (control)'
SEN1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
CYP81F2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PRA1.B4 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
STZ UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATBCB UP in 'thaxtomin A treated' vs 'methanol treated (control)'
FLA9 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
JAZ5 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
NUDT7 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
RALFL28 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT5G45280 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
FLA9 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT2G20142 UP in 'isoxaben treated' vs 'methanol treated (control)'
SAG21 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT2G39110 UP in 'isoxaben treated' vs 'methanol treated (control)'
BAP1 UP in 'isoxaben treated' vs 'methanol treated (control)'
ERF013 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
HIR3 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATJ11 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AGO3 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATMPK3 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATL2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PME34 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
TET9 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATHSP17.4 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT1G15010 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PUB22 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AOC3 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT5G13200 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATXTH19 UP in 'isoxaben treated' vs 'methanol treated (control)'
HSPRO2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATCK1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PAD3 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
KIC UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G24110 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G29780 UP in 'isoxaben treated' vs 'methanol treated (control)'
AGP20 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G61340 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
CML38 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
DREB26 UP in 'isoxaben treated' vs 'methanol treated (control)'
NDL3 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATEXLA1 UP in 'isoxaben treated' vs 'methanol treated (control)'
XTR4 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
MIOX2 UP in 'isoxaben treated' vs 'methanol treated (control)'
WRKY33 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AtGH9B5 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATG8H UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PAL2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
CZF1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATMKK9 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
BCS1 UP in 'isoxaben treated' vs 'methanol treated (control)'
PME20 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G22880 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT1G20070 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PPDK UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT4G27280 UP in 'isoxaben treated' vs 'methanol treated (control)'
AGP2 UP in 'isoxaben treated' vs 'methanol treated (control)'
ACS2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATATH6 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
PME20 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT2G32190 UP in 'isoxaben treated' vs 'methanol treated (control)'
ATXTH18 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
AT2G32030 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ANAC019 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
MKS1 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
BGLU46 UP in 'isoxaben treated' vs 'methanol treated (control)'
TET8 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATC4H UP in 'thaxtomin A treated' vs 'methanol treated (control)'
ATGA2OX2 UP in 'thaxtomin A treated' vs 'methanol treated (control)'
sks9 UP in 'isoxaben treated' vs 'methanol treated (control)'
AT1G56060 UP in 'thaxtomin A treated' vs 'methanol treated (control)'