AT2G33830 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
HSPRO2 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
ATMYBL2 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT2G05540 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
SRG3 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
GPT2 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
Analysis of 'elf3-7' vs 'wild type' at '23 degree celsius'
PLP2 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT2G23840 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
NRT1.7 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT3G27400 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G80440 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G01240 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
COL2 DOWN in 'elf3-7' vs 'wild type' at '23 degree celsius'
BETA-OHASE 2 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
ATJ11 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
CP5 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G76960 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT2G33830 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT1G19530 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G79700 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
ATHCHIB UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
UGE1 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
LHY DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
CYP89A9 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT3G17520 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
BGLU47 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
ATMES18 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
CCA1 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
GRXC6 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G23140 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G22890 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT4G23680 UP in 'tfl1-1' vs 'wild type' at '23 degree celsius'
AtbZIP UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
Plants regulate their time to flowering by gathering information from the environment. Photoperiod and temperature are among the most important environmental variables. Suboptimal, but not near-freezing, temperatures regulate flowering through the thermosensory pathway, which overlaps with the autonomous pathway. Here we show that ambient temperature regulates flowering by two genetically distinguishable pathways, one that requires TFL1 and another that requires ELF3. The delay in flowering time observed at lower temperatures was partially suppressed in single elf3 and tfl1 mutants, whereas double elf3 tfl1 mutants were insensitive to temperature. tfl1 mutations abolished the temperature response in cryptochrome mutants that are deficient in photoperiod perception, but not in phyB mutants that have a constitutive photoperiodic response. Contrary to tfl1, elf3 mutations were able to suppress the temperature response in phyB mutants, but not in cryptochrome mutants. The gene expression profile revealed that the tfl1 and elf3 effects are due to the activation of different sets of genes and identified CCA1 and SOC1/AGL20 as being important cross talk points. Finally, genome-wide gene expression analysis strongly suggests a general and complementary role for ELF3 and TFL1 in temperature signalling. Three genotypes, WT (Columbia), elf3-7 and tfl1-1 mutants. Three biological replicates for each condition (genotype X temperature combination). RNA prepared independently for each sample.
ASN1 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G62500 DOWN in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT1G68110 DOWN in 'elf3-7' vs 'wild type' at '23 degree celsius'
ATSBT5.2 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT1G69160 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT4G15430 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
LTP4 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AtPP2-A13 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G47400 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT3G13650/MMM17_4 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
ATTPS8 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
ATGSTF12 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
WAXY DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT2G30600 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G04560 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G18980 UP in 'elf3-7' vs 'wild type' at '23 degree celsius'
PYD4 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
ATGSTF14 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
LOX1 UP in 'elf3-7' vs 'wild type' at '23 degree celsius'
CYP82C4 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
LZF1 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G43590 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G70810 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT3G06070 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G43910 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
ATACP5 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
GI UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
CYP707A2 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
BHLH039 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G72820 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
MEE14 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT4G03960 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
M17 DOWN in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT1G21100 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT3G09600 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT3G15450 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT2G20670 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
FT UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
SEN1 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
BT2 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT4G27450 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
ATNAS2 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
RVE1 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT2G27420 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
CORI3 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT3G12900 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
LHY DOWN in 'elf3-7' vs 'wild type' at '23 degree celsius'
ICL DOWN in 'tfl1-1' vs 'wild type' at '16 degree celsius'
SEN1 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
BGLU19 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
(Factor value) GENOTYPE/wild type genotype
LOX2 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
HIS1-3 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
PER49 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
ETP1 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
DYL1 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
ATTPS11 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
CORI3 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AKINBETA1 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AGL20 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT3G54500 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G67865 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G23390 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT2G25200 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
ATPS2 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AtcwINV5 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G47400 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
SAT32 DOWN in 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT3G26960 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
ATCTH DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT3G61930 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
GI UP in 'elf3-7' vs 'wild type' at '23 degree celsius'
RD20 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
LEA18 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT4G33070 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT5G35970 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
UGT75C1 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT5MAT UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G54870 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
J8 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT4G12490 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
ELIP1 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
COPT2 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
TBL26 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
Analysis of 'elf3-7' vs 'wild type' at '16 degree celsius'
HD2A DOWN in 'tfl1-1' vs 'wild type' at '16 degree celsius'
WRKY26 UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
ELIP1 UP in 'elf3-7' vs 'wild type' at '23 degree celsius'
AT1G32560 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G43590 DOWN in 'elf3-7' vs 'wild type' at '23 degree celsius'
COR15A UP in 'tfl1-1' vs 'wild type' at '16 degree celsius'
CYP71B26 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
PLP DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT3G10020 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT2G47010 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
COL2 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT2G37870 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
TT7 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
RAV2 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G52000 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
Analysis of 'tfl1-1' vs 'wild type' at '16 degree celsius'
AT3G06390 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
Analysis of 'tfl1-1' vs 'wild type' at '23 degree celsius'
AT2G41250 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G68190 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'
AT1G80130 UP in 'elf3-7' vs 'wild type' at '16 degree celsius'
ATOFP16 DOWN in 'elf3-7' vs 'wild type' at '16 degree celsius'