PGM2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.24580116252636
p value: 0.0298563242599308
refers to: PGM2
refers to: 260207_at
t statistic: -3.72293556387163

253780_at
type: EFO_0005072
part of: A-AFFY-2

ATTIM17-1
type: EnsemblDatabaseReference

262132_at
type: EFO_0005072
part of: A-AFFY-2

FBL14
type: EnsemblDatabaseReference

AT2G04690 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04374006927204
p value: 0.00776675616903812
refers to: AT2G04690
refers to: 263647_at
t statistic: -5.76761083674438

AT4G02360
type: EnsemblDatabaseReference

PIL5 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.4208385480994
p value: 6.21757337851341E-4
refers to: PIL5
refers to: 265584_at
t statistic: -16.7628153224991

CRK2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10779811014332
p value: 0.00256358195818963
refers to: 260303_at
refers to: CRK2
t statistic: -8.81028003303191

259224_at
type: EFO_0005072
part of: A-AFFY-2

MSD2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.6128248062484
p value: 0.00537422628462182
refers to: MSD2
refers to: 251731_at
t statistic: -6.66085670827953

R1
type: EnsemblDatabaseReference

245629_at
type: EFO_0005072
part of: A-AFFY-2

263319_at
type: EFO_0005072
part of: A-AFFY-2

ATEM1
type: EnsemblDatabaseReference

AT4G27280
type: EnsemblDatabaseReference

DREB19 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.84102895607226
p value: 0.0436233614799504
refers to: DREB19
refers to: 267026_at
t statistic: 3.29348802479567

AT1G80450 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.032576328559
p value: 0.0095472486528071
refers to: AT1G80450
refers to: 260276_at
t statistic: 5.38067433133067

257333_at
type: EFO_0005072
part of: A-AFFY-2

AT3G09600
type: EnsemblDatabaseReference

ATNRT1:2
type: EnsemblDatabaseReference

AT3G54400
type: EnsemblDatabaseReference

CYP96A12 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.93973156977542
p value: 0.00152232446001113
refers to: CYP96A12
refers to: 252911_at
t statistic: 12.0026096222216

AT2G30990
type: EnsemblDatabaseReference

266814_at
type: EFO_0005072
part of: A-AFFY-2

246575_at
type: EFO_0005072
part of: A-AFFY-2

BXL2
type: EnsemblDatabaseReference

AT5G47020 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02486303662501
p value: 0.00202770630035106
refers to: AT5G47020
refers to: 248817_at
t statistic: -9.72118977905265

AT1G73020 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.41019846417358
p value: 0.012791634395089
refers to: AT1G73020
refers to: 262379_at
t statistic: -4.90037470126291

AT2G04690
type: EnsemblDatabaseReference

TTL3
type: EnsemblDatabaseReference

ABI4
type: EnsemblDatabaseReference

(Assay) Col-0, dark, biological rep1
type: Assay
identifier: Col-0, dark, biological rep1
has participant: A-AFFY-2

AT3G03770
type: EnsemblDatabaseReference

ACS2
type: EnsemblDatabaseReference

PHO1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.25702789334703
p value: 0.0223986798684664
refers to: 258293_at
refers to: PHO1
t statistic: 4.08231310753801

(Sample) organism/Arabidopsis thaliana
type: Arabidopsis thaliana
property type: organism
property value: Arabidopsis thaliana

TPS22 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2604336122915
p value: 0.00744808574074605
refers to: TPS22
refers to: 261985_at
t statistic: 5.84401105937195

AT1G05510
type: EnsemblDatabaseReference

248210_at
type: EFO_0005072
part of: A-AFFY-2

ATOPT6
type: EnsemblDatabaseReference

AT3G25870 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.80012393788697
p value: 0.00744808574074605
refers to: 258078_at
refers to: AT3G25870
t statistic: -5.85790537580379

ATTSPO
type: EnsemblDatabaseReference

AT2G29300 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.27602067264233
p value: 0.00181180731678406
refers to: AT2G29300
refers to: 266278_at
t statistic: -10.3863773479305

266342_at
type: EFO_0005072
part of: A-AFFY-2

AT1G30690
type: EnsemblDatabaseReference

AT3G03270 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.94163144971396
p value: 0.00589477640147691
refers to: AT3G03270
refers to: 258879_at
t statistic: 6.4111681696268

ARPN
type: EnsemblDatabaseReference

AT2G46060
type: EnsemblDatabaseReference

AT2G33830
type: EnsemblDatabaseReference

253322_at
type: EFO_0005072
part of: A-AFFY-2

AT3G19990 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0174938466856
p value: 0.00152232446001113
refers to: AT3G19990
refers to: 256624_at
t statistic: -12.0636368723984

AT5G42720
type: EnsemblDatabaseReference

AT5G45690
type: EnsemblDatabaseReference

AT1G66890
type: EnsemblDatabaseReference

265495_at
type: EFO_0005072
part of: A-AFFY-2

266070_at
type: EFO_0005072
part of: A-AFFY-2

262116_at
type: EFO_0005072
part of: A-AFFY-2

257888_at
type: EFO_0005072
part of: A-AFFY-2

261514_at
type: EFO_0005072
part of: A-AFFY-2

LTP
type: EnsemblDatabaseReference

ATG1
type: EnsemblDatabaseReference

AT3G49790
type: EnsemblDatabaseReference

262703_at
type: EFO_0005072
part of: A-AFFY-2

ATARP9 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22666578156036
p value: 0.0323404563315966
refers to: ATARP9
refers to: 249127_at
t statistic: -6.45994983398257

AT3G11780
type: EnsemblDatabaseReference

ARF18 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02833723890683
p value: 0.00870060320544434
refers to: ARF18
refers to: 251289_at
t statistic: -5.54209321558135

257074_at
type: EFO_0005072
part of: A-AFFY-2

AT1G14950 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0729106695291
p value: 0.0299235649174941
refers to: AT1G14950
refers to: 262828_at
t statistic: -3.71900200500667

XF1
type: EnsemblDatabaseReference

262431_at
type: EFO_0005072
part of: A-AFFY-2

AT1G69760
type: EnsemblDatabaseReference

AT5G05320 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.90698904686379
p value: 7.60827748523182E-4
refers to: AT5G05320
refers to: 250776_at
t statistic: -15.6578295928874

266555_at
type: EFO_0005072
part of: A-AFFY-2

258263_at
type: EFO_0005072
part of: A-AFFY-2

265266_at
type: EFO_0005072
part of: A-AFFY-2

260540_at
type: EFO_0005072
part of: A-AFFY-2

258406_at
type: EFO_0005072
part of: A-AFFY-2

YAB5
type: EnsemblDatabaseReference

BOR1
type: EnsemblDatabaseReference

GH3.1
type: EnsemblDatabaseReference

AT1G48280 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.36617800665046
p value: 0.00287581021415021
refers to: AT1G48280
refers to: 262250_at
t statistic: -8.45921307223055

AT3G10040
type: EnsemblDatabaseReference

AT2G38905
type: EnsemblDatabaseReference

AT5G01670 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.09364778695498
p value: 0.00206387023957797
refers to: AT5G01670
refers to: 251100_at
t statistic: -9.63771671171188

AT3G19360
type: EnsemblDatabaseReference

AT1G69760 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4691005176139
p value: 7.60827748523182E-4
refers to: AT1G69760
refers to: 260367_at
t statistic: 15.1382031383966

RPS11B
type: EnsemblDatabaseReference

AT5G45690 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.0272816801292
p value: 0.00194108865771302
refers to: 248915_at
refers to: AT5G45690
t statistic: -9.9771365321865

AT1G17360 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.76061274374445
p value: 0.00981712613383307
refers to: 261031_at
refers to: AT1G17360
t statistic: 5.32693307976028

ATTPS6
type: EnsemblDatabaseReference

267472_at
type: EFO_0005072
part of: A-AFFY-2

261013_at
type: EFO_0005072
part of: A-AFFY-2

262916_at
type: EFO_0005072
part of: A-AFFY-2

PV42A DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.86832337784851
p value: 0.00220454385772802
refers to: 262580_at
refers to: PV42A
t statistic: -9.41330980106087

PLT6
type: EnsemblDatabaseReference

AT2G11890 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.05572233197841
p value: 0.0157110131402725
refers to: AT2G11890
refers to: 263637_at
t statistic: 4.5721356461157

AT2G38480
type: EnsemblDatabaseReference

ERL2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17052605841592
p value: 0.0113143522021337
refers to: ERL2
refers to: 250642_at
t statistic: -5.096428265645

AT4G21020
type: EnsemblDatabaseReference

AT4G01280 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.18772931401308
p value: 0.00778678680251453
refers to: AT4G01280
refers to: 255614_at
t statistic: -5.76215039567016

AT2G47680
type: EnsemblDatabaseReference

260309_at
type: EFO_0005072
part of: A-AFFY-2

AT3G22490
type: EnsemblDatabaseReference

AAE7
type: EnsemblDatabaseReference

AT3G17520
type: EnsemblDatabaseReference

262399_at
type: EFO_0005072
part of: A-AFFY-2

CF9 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06434823831471
p value: 0.00396387317559223
refers to: 262071_at
refers to: CF9
t statistic: 7.49093011935688

XF1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06882942910744
p value: 0.0407989303962574
refers to: XF1
refers to: 245809_at
t statistic: -3.35956291174379

CAO DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00792748018693
p value: 0.0410042846148256
refers to: 245123_at
refers to: CAO
t statistic: -5.79190766274216

AT4G02360 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.95296826550715
p value: 0.00658913480551956
refers to: AT4G02360
refers to: 255527_at
t statistic: -6.1273150392368

AT1G65090
type: EnsemblDatabaseReference

CF9
type: EnsemblDatabaseReference

RCE2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.5710861783759
p value: 0.00810273740019957
refers to: RCE2
refers to: 265926_at
t statistic: 5.66956610456257

258347_at
type: EFO_0005072
part of: A-AFFY-2

AT1G49150
type: EnsemblDatabaseReference

245501_at
type: EFO_0005072
part of: A-AFFY-2

ASN1
type: EnsemblDatabaseReference

AT5G05320
type: EnsemblDatabaseReference

SWEET6
type: EnsemblDatabaseReference

(Assay) pil5, red light, biological rep3
type: Assay
identifier: pil5, red light, biological rep3
has participant: A-AFFY-2

ATTI2
type: EnsemblDatabaseReference

AT3G15720
type: EnsemblDatabaseReference

246273_at
type: EFO_0005072
part of: A-AFFY-2

RGA1
type: EnsemblDatabaseReference

AFP3
type: EnsemblDatabaseReference

AT3G12920 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.68859209743697
p value: 0.00576985153659368
refers to: AT3G12920
refers to: 257858_at
t statistic: -6.47550523455623

AT2G37240 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.32739602126862
p value: 0.0159839165107381
refers to: AT2G37240
refers to: 265959_at
t statistic: 4.54701123166093

AT5G62710 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21739515502214
p value: 0.0235951365086443
refers to: AT5G62710
refers to: 247441_at
t statistic: -7.35798152075715

261713_at
type: EFO_0005072
part of: A-AFFY-2

261026_at
type: EFO_0005072
part of: A-AFFY-2

AT2G47680 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.32163221715634
p value: 0.0299573805663715
refers to: AT2G47680
refers to: 266511_at
t statistic: 6.70839361309014

AT1G23040
type: EnsemblDatabaseReference

UGT73B5
type: EnsemblDatabaseReference

AT1G48870 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.37259229065582
p value: 0.00259908915498995
refers to: AT1G48870
refers to: 246626_at
t statistic: 8.78530503945943

ARO3
type: EnsemblDatabaseReference

SVB
type: EnsemblDatabaseReference

AT2G01540
type: EnsemblDatabaseReference

AT4G31320
type: EnsemblDatabaseReference

AT3G03590
type: EnsemblDatabaseReference

249838_at
type: EFO_0005072
part of: A-AFFY-2

AT1G05710 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.51610354739417
p value: 0.00188901210923587
refers to: AT1G05710
refers to: 263179_at
t statistic: 10.1313908772399

HMT-1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.28095660344242
p value: 0.0300701030125492
refers to: 258075_at
refers to: HMT-1
t statistic: 3.70951485820872

AT3G03770 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.23115300831868
p value: 0.00173961140697183
refers to: 259348_at
refers to: AT3G03770
t statistic: 10.7281699229146

258705_at
type: EFO_0005072
part of: A-AFFY-2

259749_at
type: EFO_0005072
part of: A-AFFY-2

ATMES10
type: EnsemblDatabaseReference

YAB5 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14092735001233
p value: 0.00157400087891326
refers to: YAB5
refers to: 245029_at
t statistic: 11.1618518205423

251428_at
type: EFO_0005072
part of: A-AFFY-2

PETC
type: EnsemblDatabaseReference

256814_at
type: EFO_0005072
part of: A-AFFY-2

AT1G05330
type: EnsemblDatabaseReference

NPC3
type: EnsemblDatabaseReference

245442_at
type: EFO_0005072
part of: A-AFFY-2

257858_at
type: EFO_0005072
part of: A-AFFY-2

AT2G42190 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03473779604854
p value: 0.0393274765164717
refers to: 267637_at
refers to: AT2G42190
t statistic: -3.4047046620831

267084_at
type: EFO_0005072
part of: A-AFFY-2

246631_at
type: EFO_0005072
part of: A-AFFY-2

ENODL15
type: EnsemblDatabaseReference

261926_at
type: EFO_0005072
part of: A-AFFY-2

ATST2B
type: EnsemblDatabaseReference

THH1
type: EnsemblDatabaseReference

BGLU44
type: EnsemblDatabaseReference

AT1G74750
type: EnsemblDatabaseReference

GASA3
type: EnsemblDatabaseReference

AT1G02816
type: EnsemblDatabaseReference

AT4G25780
type: EnsemblDatabaseReference

AtRABH1c DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13724440995097
p value: 0.0232802426349487
refers to: AtRABH1c
refers to: 252825_at
t statistic: -4.02719533393047

AT2G40475
type: EnsemblDatabaseReference

251743_at
type: EFO_0005072
part of: A-AFFY-2

ATFER2
type: EnsemblDatabaseReference

256442_at
type: EFO_0005072
part of: A-AFFY-2

245070_at
type: EFO_0005072
part of: A-AFFY-2

255840_at
type: EFO_0005072
part of: A-AFFY-2

ACD32.1
type: EnsemblDatabaseReference

ILL6
type: EnsemblDatabaseReference

AT3G61900
type: EnsemblDatabaseReference

251643_at
type: EFO_0005072
part of: A-AFFY-2

ATST2A DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.83588730446781
p value: 0.0131689785057686
refers to: 250662_at
refers to: ATST2A
t statistic: -4.85065939892193

AT5G01950 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.65893715898109
p value: 0.00157400087891326
refers to: AT5G01950
refers to: 251071_at
t statistic: -11.1855169986531

PIN1
type: EnsemblDatabaseReference

LTP2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4107644683705
p value: 0.00194882802072568
refers to: LTP2
refers to: 266415_at
t statistic: -9.93374922434343

AT3G63160
type: EnsemblDatabaseReference

sks4 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.42377950503412
p value: 0.041346873865535
refers to: sks4
refers to: 254363_at
t statistic: -5.72829213947511

266253_at
type: EFO_0005072
part of: A-AFFY-2

AT4G01410
type: EnsemblDatabaseReference

259864_at
type: EFO_0005072
part of: A-AFFY-2

NSP2
type: EnsemblDatabaseReference

AT1G07040
type: EnsemblDatabaseReference

CHR34
type: EnsemblDatabaseReference

ATAF1
type: EnsemblDatabaseReference

AT3G60780
type: EnsemblDatabaseReference

264262_at
type: EFO_0005072
part of: A-AFFY-2

ATPCAP1
type: EnsemblDatabaseReference

264405_at
type: EFO_0005072
part of: A-AFFY-2

EXL2
type: EnsemblDatabaseReference

253033_at
type: EFO_0005072
part of: A-AFFY-2

AT3G08810 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.29110144727162
p value: 0.0136015308131256
refers to: 258670_at
refers to: AT3G08810
t statistic: 4.80112124554007

254764_at
type: EFO_0005072
part of: A-AFFY-2

ULT1 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12488957291503
p value: 0.0426222228497861
refers to: 253811_at
refers to: ULT1
t statistic: -5.55964494772239

TPS06
type: EnsemblDatabaseReference

SEN1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.49873700097435
p value: 0.00118065744572655
refers to: 253161_at
refers to: SEN1
t statistic: -12.8463510670722

AT2G30620
type: EnsemblDatabaseReference

SEP2
type: EnsemblDatabaseReference

253475_at
type: EFO_0005072
part of: A-AFFY-2

CBSX5
type: EnsemblDatabaseReference

NSFBX
type: EnsemblDatabaseReference

AT1G66070
type: EnsemblDatabaseReference

266611_at
type: EFO_0005072
part of: A-AFFY-2

(Sample) organism part/whole organism
type: EFO_0002906
property type: organism part
property value: whole organism

258788_at
type: EFO_0005072
part of: A-AFFY-2

ATAMY3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22847308607133
p value: 0.0200642429004221
refers to: ATAMY3
refers to: 260412_at
t statistic: -4.22167794514319

264720_at
type: EFO_0005072
part of: A-AFFY-2

GXM3
type: EnsemblDatabaseReference

262856_at
type: EFO_0005072
part of: A-AFFY-2

266511_at
type: EFO_0005072
part of: A-AFFY-2

AT4G19390
type: EnsemblDatabaseReference

AT1G03470
type: EnsemblDatabaseReference

AtPPa2
type: EnsemblDatabaseReference

AT5G45280 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27440235185247
p value: 0.0195003034925189
refers to: 248968_at
refers to: AT5G45280
t statistic: 4.26371583166773

256870_at
type: EFO_0005072
part of: A-AFFY-2

AtSIP2
type: EnsemblDatabaseReference

245668_at
type: EFO_0005072
part of: A-AFFY-2

UP6
type: EnsemblDatabaseReference

AT1G10110
type: EnsemblDatabaseReference

ATGSTU8
type: EnsemblDatabaseReference

SOM DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12854058361676
p value: 0.00333683966931525
refers to: SOM
refers to: 265084_at
t statistic: -8.01514795316752

IAA16 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.66701674350665
p value: 0.00451482323289249
refers to: 258797_at
refers to: IAA16
t statistic: 7.09694081809819

ATMYC2
type: EnsemblDatabaseReference

AT2G16460
type: EnsemblDatabaseReference

HMT-1
type: EnsemblDatabaseReference

AT1G55200
type: EnsemblDatabaseReference

AT1G14960
type: EnsemblDatabaseReference

AT3G16150
type: EnsemblDatabaseReference

NAP
type: EnsemblDatabaseReference

AT3G10040 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.46605921083242
p value: 0.00416066047245431
refers to: AT3G10040
refers to: 258930_at
t statistic: 7.3627316814844

GXM3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.50276648691255
p value: 0.00537422628462182
refers to: GXM3
refers to: 261999_at
t statistic: 6.65742994883448

NAM UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.6188763216451
p value: 0.0404628614477343
refers to: NAM
refers to: 260156_at
t statistic: 3.36988565993529

AHA2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.57428165520238
p value: 0.00666766968907253
refers to: 253609_at
refers to: AHA2
t statistic: 6.09184123502515

263499_at
type: EFO_0005072
part of: A-AFFY-2

AAE7 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.36209197910714
p value: 0.00206387023957797
refers to: AAE7
refers to: 257880_at
t statistic: -9.61753104845159

CAT3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.57429086177313
p value: 0.00325825314249933
refers to: CAT3
refers to: 259544_at
t statistic: -8.0704739216113

AT4G23890
type: EnsemblDatabaseReference

CYP96A11
type: EnsemblDatabaseReference

THA1
type: EnsemblDatabaseReference

AT3G55720
type: EnsemblDatabaseReference

257830_at
type: EFO_0005072
part of: A-AFFY-2

AT3G58450 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.70969081374291
p value: 0.0051496373673126
refers to: AT3G58450
refers to: 251580_at
t statistic: -6.78756656669453

252415_at
type: EFO_0005072
part of: A-AFFY-2

AT4G26790
type: EnsemblDatabaseReference

CXE8
type: EnsemblDatabaseReference

AT1G17830
type: EnsemblDatabaseReference

249978_at
type: EFO_0005072
part of: A-AFFY-2

AT1G18480
type: EnsemblDatabaseReference

CRF1
type: EnsemblDatabaseReference

ATCTH DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.58584692807242
p value: 0.00110869895589435
refers to: 266656_at
refers to: ATCTH
t statistic: -13.0654262281123

AT4G35720
type: EnsemblDatabaseReference

ACP4
type: EnsemblDatabaseReference

AT1G56300
type: EnsemblDatabaseReference

AT1G10050
type: EnsemblDatabaseReference

AT2G30500
type: EnsemblDatabaseReference

253946_at
type: EFO_0005072
part of: A-AFFY-2

AFP2
type: EnsemblDatabaseReference

AT3G11930
type: EnsemblDatabaseReference

ATLCAT3
type: EnsemblDatabaseReference

265648_at
type: EFO_0005072
part of: A-AFFY-2

PKP4 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.18327639357018
p value: 0.0409354461305762
refers to: PKP4
refers to: 252300_at
t statistic: 3.35576483572008

RLK
type: EnsemblDatabaseReference

ATBS1
type: EnsemblDatabaseReference

251339_at
type: EFO_0005072
part of: A-AFFY-2

AT1G02700
type: EnsemblDatabaseReference

Aty2
type: EnsemblDatabaseReference

ACHT4
type: EnsemblDatabaseReference

AT2G04039
type: EnsemblDatabaseReference

OLEO4 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.35874392371083
p value: 0.0127781465842649
refers to: OLEO4
refers to: 258240_at
t statistic: -4.90481071431576

AT3G15450
type: EnsemblDatabaseReference

265276_at
type: EFO_0005072
part of: A-AFFY-2

PNP-A
type: EnsemblDatabaseReference

261594_at
type: EFO_0005072
part of: A-AFFY-2

ATBCA4
type: EnsemblDatabaseReference

263385_at
type: EFO_0005072
part of: A-AFFY-2

265863_at
type: EFO_0005072
part of: A-AFFY-2

267038_at
type: EFO_0005072
part of: A-AFFY-2

256525_at
type: EFO_0005072
part of: A-AFFY-2

257571_at
type: EFO_0005072
part of: A-AFFY-2

AT5G13610
type: EnsemblDatabaseReference

GAE1
type: EnsemblDatabaseReference

ACP1
type: EnsemblDatabaseReference

ATMGL
type: EnsemblDatabaseReference

253887_at
type: EFO_0005072
part of: A-AFFY-2

PAP85
type: EnsemblDatabaseReference

254634_at
type: EFO_0005072
part of: A-AFFY-2

CYCP1;1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03970850970401
p value: 0.0051483663301959
refers to: 251150_at
refers to: CYCP1;1
t statistic: 6.79489860452034

ATECP31 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.97196370335099
p value: 0.00226825869834649
refers to: ATECP31
refers to: 256938_at
t statistic: -9.14820936232999

ATLP-1 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.95434926106878
p value: 0.0235951365086443
refers to: ATLP-1
refers to: 256125_at
t statistic: -7.69917066125092

FBL14
type: EnsemblDatabaseReference

Arabidopsis thaliana
type: OBI_0100026

AT2G38480 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1581692119032
p value: 0.002199952021624
refers to: AT2G38480
refers to: 267038_at
t statistic: 9.42492595643687

R1
type: EnsemblDatabaseReference

262826_at
type: EFO_0005072
part of: A-AFFY-2

AT5G23460
type: EnsemblDatabaseReference

AT4G29020
type: EnsemblDatabaseReference

266778_at
type: EFO_0005072
part of: A-AFFY-2

CYP707A2
type: EnsemblDatabaseReference

AT1G11360
type: EnsemblDatabaseReference

AT4G27280
type: EnsemblDatabaseReference

259918_at
type: EFO_0005072
part of: A-AFFY-2

253073_at
type: EFO_0005072
part of: A-AFFY-2

AT3G09600
type: EnsemblDatabaseReference

ATERD2
type: EnsemblDatabaseReference

T24C20_20
type: EnsemblDatabaseReference

AT4G38220
type: EnsemblDatabaseReference

BXL2
type: EnsemblDatabaseReference

255007_at
type: EFO_0005072
part of: A-AFFY-2

CRF1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.35260407764835
p value: 0.00194108865771302
refers to: 254934_at
refers to: CRF1
t statistic: 10.0158178716542

HIS1-3
type: EnsemblDatabaseReference

AT4G39900
type: EnsemblDatabaseReference

259104_at
type: EFO_0005072
part of: A-AFFY-2

AT2G04690
type: EnsemblDatabaseReference

SEP2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1963778970315
p value: 0.00262470748222843
refers to: 263875_at
refers to: SEP2
t statistic: -8.76581291676202

TTL3
type: EnsemblDatabaseReference

AT3G03770
type: EnsemblDatabaseReference

258257_at
type: EFO_0005072
part of: A-AFFY-2

CIA2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.42743588184387
p value: 0.00152232446001113
refers to: 247946_at
refers to: CIA2
t statistic: 12.0017563218718

LACS2 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.52102596623546
p value: 0.041346873865535
refers to: LACS2
refers to: 262414_at
t statistic: -5.705211179094

GMI1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45028199938331
p value: 0.0234654436539543
refers to: GMI1
refers to: 249784_at
t statistic: 4.01729400845028

AT3G07800
type: EnsemblDatabaseReference

AT5G54000 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0989325230604
p value: 0.0276826248701187
refers to: 248210_at
refers to: AT5G54000
t statistic: -3.80823478128125

258402_at
type: EFO_0005072
part of: A-AFFY-2

AT1G05510
type: EnsemblDatabaseReference

258599_at
type: EFO_0005072
part of: A-AFFY-2

AT1G30690
type: EnsemblDatabaseReference

RD19 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4883219376577
p value: 0.0345081910372871
refers to: RD19
refers to: 252927_at
t statistic: 3.54758845010702

ATECI3
type: EnsemblDatabaseReference

AT2G33830
type: EnsemblDatabaseReference

AT1G56700
type: EnsemblDatabaseReference

CYP71B34
type: EnsemblDatabaseReference

NIP5;1
type: EnsemblDatabaseReference

AT1G75580
type: EnsemblDatabaseReference

266322_at
type: EFO_0005072
part of: A-AFFY-2

AT3G14430 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16466534656178
p value: 0.00651552297673325
refers to: AT3G14430
refers to: 257279_at
t statistic: -6.17937177785976

AT4G36700
type: EnsemblDatabaseReference

255807_at
type: EFO_0005072
part of: A-AFFY-2

267366_at
type: EFO_0005072
part of: A-AFFY-2

AT5G56350 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.18808486265822
p value: 0.012791634395089
refers to: AT5G56350
refers to: 247989_at
t statistic: 4.89933015439747

PIL2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -4.56920385372925
p value: 0.00109248354569113
refers to: 251245_at
refers to: PIL2
t statistic: -13.4288900191712

LBD18
type: EnsemblDatabaseReference

HAI2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2472278394867
p value: 0.014633856986993
refers to: 261077_at
refers to: HAI2
t statistic: -4.67910211807141

ATG1
type: EnsemblDatabaseReference

245479_at
type: EFO_0005072
part of: A-AFFY-2

AT3G49790
type: EnsemblDatabaseReference

KCS8
type: EnsemblDatabaseReference

PME7 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.65946191293391
p value: 0.0185600871134102
refers to: PME7
refers to: 262105_at
t statistic: 4.33360892345805

PNP-A UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.16888594895298
p value: 0.0095472486528071
refers to: 266070_at
refers to: PNP-A
t statistic: 5.3820866319742

PV42A
type: EnsemblDatabaseReference

AT1G56190
type: EnsemblDatabaseReference

sks5
type: EnsemblDatabaseReference

AT3G26770 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.0357312296119
p value: 0.00256358195818963
refers to: AT3G26770
refers to: 258257_at
t statistic: -8.81294596245102

LBD41
type: EnsemblDatabaseReference

MLP31
type: EnsemblDatabaseReference

AT1G31240
type: EnsemblDatabaseReference

251166_at
type: EFO_0005072
part of: A-AFFY-2

NYC1
type: EnsemblDatabaseReference

AT1G80450
type: EnsemblDatabaseReference

PME44
type: EnsemblDatabaseReference

246396_at
type: EFO_0005072
part of: A-AFFY-2

255435_at
type: EFO_0005072
part of: A-AFFY-2

250022_at
type: EFO_0005072
part of: A-AFFY-2

YAB5
type: EnsemblDatabaseReference

GH3.1
type: EnsemblDatabaseReference

ATGSTU25 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.38008038686782
p value: 0.0230402221778628
refers to: ATGSTU25
refers to: 262517_at
t statistic: 4.04105479234841

AT3G10040
type: EnsemblDatabaseReference

AT2G38905
type: EnsemblDatabaseReference

256624_at
type: EFO_0005072
part of: A-AFFY-2

PNP-A UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.58677511533132
p value: 0.0299573805663715
refers to: 266070_at
refers to: PNP-A
t statistic: 6.65706815327273

AT3G19360
type: EnsemblDatabaseReference

258930_at
type: EFO_0005072
part of: A-AFFY-2

RPS11B
type: EnsemblDatabaseReference

267579_at
type: EFO_0005072
part of: A-AFFY-2

ATTPS6
type: EnsemblDatabaseReference

ATCTH
type: EnsemblDatabaseReference

253299_at
type: EFO_0005072
part of: A-AFFY-2

IAA30 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.00929987918623
p value: 0.00181384595616169
refers to: IAA30
refers to: 251246_at
t statistic: -10.3701215121232

ATEM6
type: EnsemblDatabaseReference

AT1G66070 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.00671412537351
p value: 0.00903717896655123
refers to: 256523_at
refers to: AT1G66070
t statistic: 5.47527742722823

ATPME3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.16738419579695
p value: 0.024115242248334
refers to: ATPME3
refers to: 258369_at
t statistic: 3.9791910255254

259432_at
type: EFO_0005072
part of: A-AFFY-2

261564_at
type: EFO_0005072
part of: A-AFFY-2

AT4G35720 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0212419300963
p value: 0.00383958112043112
refers to: 253155_at
refers to: AT4G35720
t statistic: -7.62093561981984

AT2G38480
type: EnsemblDatabaseReference

ATMSRB9 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.63269173224474
p value: 0.0193226540218519
refers to: ATMSRB9
refers to: 254387_at
t statistic: -9.37227371748607

AT1G54860 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.39785495659908
p value: 0.00161179347219785
refers to: AT1G54860
refers to: 264187_at
t statistic: -11.0616963815711

AT2G32090 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0015232034837
p value: 0.00926522844788362
refers to: 265673_at
refers to: AT2G32090
t statistic: -5.43844124655555

245123_at
type: EFO_0005072
part of: A-AFFY-2

CYC1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.27936352498915
p value: 0.00811837556604942
refers to: CYC1
refers to: 253051_at
t statistic: 5.66677992470169

AT4G21020
type: EnsemblDatabaseReference

ATTPC1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23646742237526
p value: 0.0121034972066838
refers to: 255380_at
refers to: ATTPC1
t statistic: -4.98890939676236

261607_at
type: EFO_0005072
part of: A-AFFY-2

AAE7
type: EnsemblDatabaseReference

RPL3B
type: EnsemblDatabaseReference

ATFH4 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.3536167903366
p value: 0.00527452927337152
refers to: 264867_at
refers to: ATFH4
t statistic: 6.73353282576196

AT1G27990
type: EnsemblDatabaseReference

ATMPK2
type: EnsemblDatabaseReference

ATGSTU27 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.36483660772805
p value: 0.0126205259216177
refers to: ATGSTU27
refers to: 252712_at
t statistic: -11.206636375041

263226_at
type: EFO_0005072
part of: A-AFFY-2

265704_at
type: EFO_0005072
part of: A-AFFY-2

DREB2D
type: EnsemblDatabaseReference

CF9
type: EnsemblDatabaseReference

262379_at
type: EFO_0005072
part of: A-AFFY-2

255521_at
type: EFO_0005072
part of: A-AFFY-2

259645_at
type: EFO_0005072
part of: A-AFFY-2

AT1G49150
type: EnsemblDatabaseReference

AT4G20930
type: EnsemblDatabaseReference

APR2 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.26982995838103
p value: 0.0290482051795801
refers to: 264745_at
refers to: APR2
t statistic: -6.84675752249971

SWEET6
type: EnsemblDatabaseReference

ATBCA6 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13390779657124
p value: 0.00227806681172841
refers to: ATBCA6
refers to: 246396_at
t statistic: -9.11908313695353

264315_at
type: EFO_0005072
part of: A-AFFY-2

AT1G28680 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.50315176610775
p value: 0.00194108865771302
refers to: 262744_at
refers to: AT1G28680
t statistic: 9.95767085246618

AT1G32860
type: EnsemblDatabaseReference

AT4G22190
type: EnsemblDatabaseReference

AT3G17520 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1721698164409
p value: 0.0135498108952814
refers to: AT3G17520
refers to: 258347_at
t statistic: -4.80759321192146

251766_at
type: EFO_0005072
part of: A-AFFY-2

AT1G49500 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.03764240419341
p value: 0.00395336865090842
refers to: AT1G49500
refers to: 262399_at
t statistic: -7.50834416973822

PLT6 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13121194590314
p value: 0.0287992942940285
refers to: 246238_at
refers to: PLT6
t statistic: -3.76316429865381

AT3G08810
type: EnsemblDatabaseReference

AHP2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.60509138926596
p value: 0.0228790667471763
refers to: AHP2
refers to: 259409_at
t statistic: 4.05164234921646

AT3G15720
type: EnsemblDatabaseReference

SKIP27
type: EnsemblDatabaseReference

GA2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08480025125358
p value: 0.0152080346090204
refers to: GA2
refers to: 262891_at
t statistic: -4.61382375084475

XTR6
type: EnsemblDatabaseReference

AT1G74750 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45811259740764
p value: 0.0457265105199402
refers to: AT1G74750
refers to: 262219_at
t statistic: 3.24343907075417

249190_at
type: EFO_0005072
part of: A-AFFY-2

256193_at
type: EFO_0005072
part of: A-AFFY-2

ARO3
type: EnsemblDatabaseReference

AT3G21380 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.29464035774466
p value: 0.005857854812795
refers to: AT3G21380
refers to: 256815_at
t statistic: -6.43146912899398

AT2G01540
type: EnsemblDatabaseReference

UGT76C4
type: EnsemblDatabaseReference

G-TMT
type: EnsemblDatabaseReference

265817_at
type: EFO_0005072
part of: A-AFFY-2

AT3G03590
type: EnsemblDatabaseReference

254445_at
type: EFO_0005072
part of: A-AFFY-2

ACP1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.26669525495769
p value: 0.00277983332710353
refers to: ACP1
refers to: 259095_at
t statistic: -8.54935931279848

AT2G36220 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21173729786344
p value: 0.0120247387069476
refers to: AT2G36220
refers to: 263931_at
t statistic: -5.0033010787806

ATNRT1:2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.24757935783385
p value: 0.00436864920509723
refers to: ATNRT1:2
refers to: 260414_at
t statistic: 7.2374347717157

FMO GS-OX4 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 3.00645116492124
p value: 0.00109248354569113
refers to: FMO GS-OX4
refers to: 265119_at
t statistic: 13.5711745537767

AT1G05330
type: EnsemblDatabaseReference

253598_at
type: EFO_0005072
part of: A-AFFY-2

HCC2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.3905040453773
p value: 0.00447392936667178
refers to: 252864_at
refers to: HCC2
t statistic: 7.13285316295228

RABC2b
type: EnsemblDatabaseReference

GEK1
type: EnsemblDatabaseReference

PRA1.B4
type: EnsemblDatabaseReference

257867_at
type: EFO_0005072
part of: A-AFFY-2

ATHB-2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.88931698650484
p value: 0.00109248354569113
refers to: 245276_at
refers to: ATHB-2
t statistic: -13.4030745319244

AT3G07800 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.23641351490176
p value: 0.0400394445268965
refers to: AT3G07800
refers to: 259224_at
t statistic: 5.85061471062158

MCCA DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3839609982051
p value: 0.00658703799625127
refers to: MCCA
refers to: 263118_at
t statistic: -6.12888023029576

GA2
type: EnsemblDatabaseReference

TIM14-2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02979802060665
p value: 0.00356943462974242
refers to: 258716_at
refers to: TIM14-2
t statistic: 7.86168311340226

BGLU44
type: EnsemblDatabaseReference

AT1G74750
type: EnsemblDatabaseReference

GASA3
type: EnsemblDatabaseReference

AT1G02816
type: EnsemblDatabaseReference

261076_at
type: EFO_0005072
part of: A-AFFY-2

AT1G72430
type: EnsemblDatabaseReference

ATFER2
type: EnsemblDatabaseReference

AT1G01240
type: EnsemblDatabaseReference

AT4G26790 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.26982325979777
p value: 0.0180081862989784
refers to: 253946_at
refers to: AT4G26790
t statistic: 4.3793790817623

251580_at
type: EFO_0005072
part of: A-AFFY-2

AML2
type: EnsemblDatabaseReference

NLP8 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14370590176517
p value: 0.00289282434021766
refers to: 260540_at
refers to: NLP8
t statistic: 8.40954774375377

SIB2
type: EnsemblDatabaseReference

NIT3
type: EnsemblDatabaseReference

SKIP20
type: EnsemblDatabaseReference

AT2G34560 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.26995576020869
p value: 0.0061894615289453
refers to: 266905_at
refers to: AT2G34560
t statistic: -6.29740408429708

TPS06 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.00026446215526
p value: 0.00539259063405185
refers to: 264720_at
refers to: TPS06
t statistic: 6.64314466187979

ATTI7 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.58021275807279
p value: 0.00380110432137827
refers to: ATTI7
refers to: 262431_at
t statistic: -7.65034038384657

AT4G01450
type: EnsemblDatabaseReference

GRXC6
type: EnsemblDatabaseReference

258655_at
type: EFO_0005072
part of: A-AFFY-2

AT4G19420
type: EnsemblDatabaseReference

AT2G39650 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.61205658390492
p value: 0.0240117821790117
refers to: 267623_at
refers to: AT2G39650
t statistic: 3.98463738502772

LEA
type: EnsemblDatabaseReference

262580_at
type: EFO_0005072
part of: A-AFFY-2

SWEET6 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.90962946566846
p value: 0.0051483663301959
refers to: SWEET6
refers to: 256371_at
t statistic: -6.79364032726914

263325_at
type: EFO_0005072
part of: A-AFFY-2

264371_at
type: EFO_0005072
part of: A-AFFY-2

AT3G60780
type: EnsemblDatabaseReference

250776_at
type: EFO_0005072
part of: A-AFFY-2

(Assay) pil5, dark, biological rep1
type: Assay
identifier: pil5, dark, biological rep1
has participant: A-AFFY-2

AT3G18570
type: EnsemblDatabaseReference

AT4G35780 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.40412666720058
p value: 0.00469336922472057
refers to: 253158_at
refers to: AT4G35780
t statistic: -7.00320713487435

NUDX25 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.73949130515664
p value: 0.00109248354569113
refers to: NUDX25
refers to: 256192_at
t statistic: -13.584067213151

AT4G31270
type: EnsemblDatabaseReference

AT2G46260 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0822612532414
p value: 0.00527452927337152
refers to: AT2G46260
refers to: 266580_at
t statistic: -6.72372455655997

ATFD1
type: EnsemblDatabaseReference

ATPCAP1
type: EnsemblDatabaseReference

EXL2
type: EnsemblDatabaseReference

DOF2.1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.31593494081537
p value: 0.00879377057786406
refers to: DOF2.1
refers to: 264056_at
t statistic: 5.51886984576715

ATNUDT13 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17162778090634
p value: 0.0235036809596948
refers to: ATNUDT13
refers to: 257830_at
t statistic: -4.01404200527978

TPS06
type: EnsemblDatabaseReference

AtSTS
type: EnsemblDatabaseReference

MLP31 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.41565091496048
p value: 0.00443846132814057
refers to: MLP31
refers to: 262310_at
t statistic: -7.18060773702951

AT3G43720 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.91122219707665
p value: 0.0183356511119389
refers to: AT3G43720
refers to: 252711_at
t statistic: 4.35142345584439

(Assay) Col-0, red light, biological rep1
type: Assay
identifier: Col-0, red light, biological rep1
has participant: A-AFFY-2

BIM2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.76889532072734
p value: 0.00222497875680134
refers to: 259645_at
refers to: BIM2
t statistic: -9.33028653354925

AT5G57790 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.88720230178484
p value: 0.0065365970684427
refers to: 247883_at
refers to: AT5G57790
t statistic: -6.14927240456166

NSFBX
type: EnsemblDatabaseReference

AT5G44260
type: EnsemblDatabaseReference

AT1G66070
type: EnsemblDatabaseReference

249532_at
type: EFO_0005072
part of: A-AFFY-2

NIP5;1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.49181823384962
p value: 0.00621135238501475
refers to: NIP5;1
refers to: 254971_at
t statistic: 6.28536288932267

LEA18
type: EnsemblDatabaseReference

259615_at
type: EFO_0005072
part of: A-AFFY-2

UGP2
type: EnsemblDatabaseReference

GXM3
type: EnsemblDatabaseReference

ATHB54 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03066474049204
p value: 0.00153943149194439
refers to: ATHB54
refers to: 264974_at
t statistic: 11.4128712738392

ATSAR1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.45601846750185
p value: 0.0169378672611834
refers to: ATSAR1
refers to: 264252_at
t statistic: 4.46066598010931

ALDH2C4
type: EnsemblDatabaseReference

AtPPa2
type: EnsemblDatabaseReference

AT1G03470
type: EnsemblDatabaseReference

254102_at
type: EFO_0005072
part of: A-AFFY-2

AT1G10110
type: EnsemblDatabaseReference

ARPN DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0333491230831
p value: 0.0095472486528071
refers to: ARPN
refers to: 267472_at
t statistic: -5.38003240821603

HTR2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0630756112765
p value: 0.0224414222163015
refers to: 264262_at
refers to: HTR2
t statistic: -4.0761511304571

AT1G16770
type: EnsemblDatabaseReference

263882_at
type: EFO_0005072
part of: A-AFFY-2

AT3G44430 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.07098778126159
p value: 0.00187406734154602
refers to: 252659_at
refers to: AT3G44430
t statistic: 10.1583987164579

265499_at
type: EFO_0005072
part of: A-AFFY-2

AT2G16460
type: EnsemblDatabaseReference

250175_at
type: EFO_0005072
part of: A-AFFY-2

AT1G64270
type: EnsemblDatabaseReference

AT4G21020 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0933096339227
p value: 0.0398142320818517
refers to: AT4G21020
refers to: 254440_at
t statistic: -3.38690930724422

HMT-1
type: EnsemblDatabaseReference

PAR1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.85279521243878
p value: 0.0310922475176985
refers to: PAR1
refers to: 263981_at
t statistic: -3.67318130013916

AT3G12960 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0238473728003
p value: 0.00384965297829538
refers to: AT3G12960
refers to: 257853_at
t statistic: -7.60883763551206

DIN2
type: EnsemblDatabaseReference

266690_at
type: EFO_0005072
part of: A-AFFY-2

AT1G80180
type: EnsemblDatabaseReference

247883_at
type: EFO_0005072
part of: A-AFFY-2

AT4G31830 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.65710082296288
p value: 0.0135498108952814
refers to: AT4G31830
refers to: 253494_at
t statistic: -4.80676145488813

263753_at
type: EFO_0005072
part of: A-AFFY-2

AtCYS2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.39400529183817
p value: 0.00439373733597251
refers to: 265672_at
refers to: AtCYS2
t statistic: -7.22309245429879

AT4G23890
type: EnsemblDatabaseReference

AT1G66180 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.98983949404338
p value: 0.0065207692916501
refers to: AT1G66180
refers to: 256525_at
t statistic: 6.15953750865863

THA1
type: EnsemblDatabaseReference

AT3G55720
type: EnsemblDatabaseReference

AT3G52070
type: EnsemblDatabaseReference

AT1G01770 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00327515911682
p value: 0.00674363591326619
refers to: AT1G01770
refers to: 261558_at
t statistic: -6.05780906532044

245276_at
type: EFO_0005072
part of: A-AFFY-2

CXE8
type: EnsemblDatabaseReference

260716_at
type: EFO_0005072
part of: A-AFFY-2

AT1G18480
type: EnsemblDatabaseReference

CRF1
type: EnsemblDatabaseReference

254043_at
type: EFO_0005072
part of: A-AFFY-2

ATMSRB9
type: EnsemblDatabaseReference

AT4G29190 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.05664815499052
p value: 0.0234583585643381
refers to: AT4G29190
refers to: 253722_at
t statistic: -4.01786090490321

AT2G42190
type: EnsemblDatabaseReference

258167_at
type: EFO_0005072
part of: A-AFFY-2

ZAT5 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1165832985064
p value: 0.0151267577079051
refers to: 265573_at
refers to: ZAT5
t statistic: 4.62502656810475

PROT1
type: EnsemblDatabaseReference

246193_at
type: EFO_0005072
part of: A-AFFY-2

ACP4
type: EnsemblDatabaseReference

254630_at
type: EFO_0005072
part of: A-AFFY-2

AT2G30500
type: EnsemblDatabaseReference

AT1G72940 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.74946282616185
p value: 0.00173961140697183
refers to: 262383_at
refers to: AT1G72940
t statistic: 10.6118312730633

AFP2
type: EnsemblDatabaseReference

AT3G57450 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.55585129398043
p value: 0.00405141928422704
refers to: 251640_at
refers to: AT3G57450
t statistic: 7.43493605672661

ATLCAT3
type: EnsemblDatabaseReference

AT2G17660 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.08022145091078
p value: 0.00654879582951588
refers to: AT2G17660
refers to: 264617_at
t statistic: 6.14483285125767

255817_at
type: EFO_0005072
part of: A-AFFY-2

AT-HSFA7B DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.72591941607896
p value: 0.00723085286603899
refers to: 251166_at
refers to: AT-HSFA7B
t statistic: -5.9165255841106

FH2
type: EnsemblDatabaseReference

ALDH5F1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.50714191730681
p value: 0.0139189232762352
refers to: ALDH5F1
refers to: 262892_at
t statistic: -4.76355245710455

AT1G02700 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.42698959328578
p value: 0.0262882630249854
refers to: 260917_at
refers to: AT1G02700
t statistic: -3.86586715420865

AT2G22230 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04970731210401
p value: 0.0439940899307406
refers to: AT2G22230
refers to: 263432_at
t statistic: -3.28621620537308

RLK
type: EnsemblDatabaseReference

AT2G21820
type: EnsemblDatabaseReference

COL3
type: EnsemblDatabaseReference

AT4G33800 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.67138225775783
p value: 0.00153170446383341
refers to: AT4G33800
refers to: 253299_at
t statistic: -11.6600124724586

AT1G02700
type: EnsemblDatabaseReference

261975_at
type: EFO_0005072
part of: A-AFFY-2

Aty2
type: EnsemblDatabaseReference

AT2G29340 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.52209788582101
p value: 6.21757337851341E-4
refers to: 266265_at
refers to: AT2G29340
t statistic: -17.7434863339422

RTFL8
type: EnsemblDatabaseReference

250746_at
type: EFO_0005072
part of: A-AFFY-2

AT2G04039
type: EnsemblDatabaseReference

AT3G15450
type: EnsemblDatabaseReference

PV42B
type: EnsemblDatabaseReference

AT2G29670
type: EnsemblDatabaseReference

PNP-A
type: EnsemblDatabaseReference

ATBCA4
type: EnsemblDatabaseReference

262892_at
type: EFO_0005072
part of: A-AFFY-2

AT1G30200
type: EnsemblDatabaseReference

URH1
type: EnsemblDatabaseReference

263637_at
type: EFO_0005072
part of: A-AFFY-2

267591_at
type: EFO_0005072
part of: A-AFFY-2

ATTPC1
type: EnsemblDatabaseReference

AT3G22490 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.05648376435243
p value: 0.0032209588751931
refers to: AT3G22490
refers to: 256931_at
t statistic: -8.09444240028413

AT4G29890 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.47876264054674
p value: 0.0165299795655952
refers to: AT4G29890
refers to: 253701_at
t statistic: -4.49788289808029

AT5G13610
type: EnsemblDatabaseReference

GAE1
type: EnsemblDatabaseReference

252852_at
type: EFO_0005072
part of: A-AFFY-2

AT2G26190
type: EnsemblDatabaseReference

261032_at
type: EFO_0005072
part of: A-AFFY-2

AT1G11360 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.26197540203812
p value: 0.00460896386156689
refers to: AT1G11360
refers to: 261828_at
t statistic: -7.04832154691963

AT2G25890
type: EnsemblDatabaseReference

262076_at
type: EFO_0005072
part of: A-AFFY-2

SKIP20 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.52936795353766
p value: 0.0051483663301959
refers to: SKIP20
refers to: 251443_at
t statistic: -6.79894957083059

AT5G23460
type: EnsemblDatabaseReference

AT4G29020
type: EnsemblDatabaseReference

262219_at
type: EFO_0005072
part of: A-AFFY-2

263265_at
type: EFO_0005072
part of: A-AFFY-2

CYP707A2
type: EnsemblDatabaseReference

AT1G11360
type: EnsemblDatabaseReference

ATERD2
type: EnsemblDatabaseReference

AT1G48430 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.18316780352018
p value: 0.0231147518253477
refers to: AT1G48430
refers to: 261294_at
t statistic: -4.03478997877757

263410_at
type: EFO_0005072
part of: A-AFFY-2

251291_at
type: EFO_0005072
part of: A-AFFY-2

258024_at
type: EFO_0005072
part of: A-AFFY-2

251289_at
type: EFO_0005072
part of: A-AFFY-2

252036_at
type: EFO_0005072
part of: A-AFFY-2

T24C20_20
type: EnsemblDatabaseReference

253767_at
type: EFO_0005072
part of: A-AFFY-2

AT4G15620 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10680697787123
p value: 0.026273726884118
refers to: 245501_at
refers to: AT4G15620
t statistic: -3.86756387683752

260772_at
type: EFO_0005072
part of: A-AFFY-2

PDF2.3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08416725620562
p value: 0.0476277799017353
refers to: PDF2.3
refers to: 266118_at
t statistic: -3.19645632148013

HIS1-3
type: EnsemblDatabaseReference

SSI2
type: EnsemblDatabaseReference

AT4G39900
type: EnsemblDatabaseReference

DIN2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.78604447741629
p value: 0.0391762724661797
refers to: DIN2
refers to: 251428_at
t statistic: -3.40857719320344

AT2G42000
type: EnsemblDatabaseReference

253812_at
type: EFO_0005072
part of: A-AFFY-2

RGA1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02771792159847
p value: 0.00587291817390114
refers to: RGA1
refers to: 266331_at
t statistic: -6.42265779874785

AT3G07800
type: EnsemblDatabaseReference

ATAMI1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.70817065533184
p value: 0.00222497875680134
refers to: ATAMI1
refers to: 264653_at
t statistic: -9.33354035714866

AT4G34480
type: EnsemblDatabaseReference

256618_at
type: EFO_0005072
part of: A-AFFY-2

AT2G40230
type: EnsemblDatabaseReference

(Factor value) GROWTH_CONDITION/far-red light
type: EFO_0000001
property type: GROWTH_CONDITION
property value: far-red light

AT2G21820 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.39619579031527
p value: 0.00201438534069138
refers to: AT2G21820
refers to: 263881_at
t statistic: -9.84312883955233

ABI4 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.62307566021939
p value: 0.00226825869834649
refers to: ABI4
refers to: 263377_at
t statistic: 9.156309678514

AT1G56700
type: EnsemblDatabaseReference

VRN5 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.00141027546106
p value: 0.00264870308681701
refers to: VRN5
refers to: 256618_at
t statistic: 8.70511739745383

ATECI3
type: EnsemblDatabaseReference

NUDX25
type: EnsemblDatabaseReference

AT4G33800
type: EnsemblDatabaseReference

AT2G36220
type: EnsemblDatabaseReference

CYP71B34
type: EnsemblDatabaseReference

247010_at
type: EFO_0005072
part of: A-AFFY-2

259426_at
type: EFO_0005072
part of: A-AFFY-2

250358_at
type: EFO_0005072
part of: A-AFFY-2

254013_at
type: EFO_0005072
part of: A-AFFY-2

NIP5;1
type: EnsemblDatabaseReference

AT1G68670
type: EnsemblDatabaseReference

AT1G75580
type: EnsemblDatabaseReference

248668_at
type: EFO_0005072
part of: A-AFFY-2

AT4G36700
type: EnsemblDatabaseReference

LBD18
type: EnsemblDatabaseReference

265584_at
type: EFO_0005072
part of: A-AFFY-2

UGT73B4 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.86946352245841
p value: 0.0305651624610025
refers to: 265501_at
refers to: UGT73B4
t statistic: 3.69241393563124

KCS8
type: EnsemblDatabaseReference

RTNLB22 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4312010623705
p value: 0.00484090079920362
refers to: 264304_at
refers to: RTNLB22
t statistic: -6.93586117097423

AT4G25780 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2521514348063
p value: 0.00264870308681701
refers to: AT4G25780
refers to: 254024_at
t statistic: 8.70463386382492

XTR2
type: EnsemblDatabaseReference

PV42A
type: EnsemblDatabaseReference

AT1G56190
type: EnsemblDatabaseReference

AT4G01450 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.15830625588363
p value: 0.0174160449033841
refers to: AT4G01450
refers to: 255578_at
t statistic: 4.4203919535142

sks5
type: EnsemblDatabaseReference

ATL57 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.06600148244517
p value: 9.01022973538995E-4
refers to: ATL57
refers to: 257429_at
t statistic: -14.4007080004844

LBD41
type: EnsemblDatabaseReference

MLP31
type: EnsemblDatabaseReference

AT3G52060
type: EnsemblDatabaseReference

AGP15 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.11225063723254
p value: 0.0250476112861223
refers to: AGP15
refers to: 250358_at
t statistic: 3.92582487446874

AT1G31240
type: EnsemblDatabaseReference

263836_at
type: EFO_0005072
part of: A-AFFY-2

NYC1
type: EnsemblDatabaseReference

PME44
type: EnsemblDatabaseReference

AT1G80450
type: EnsemblDatabaseReference

PLP DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.32906345845949
p value: 0.00689461071934252
refers to: 267477_at
refers to: PLP
t statistic: -6.01807150822497

SUS3
type: EnsemblDatabaseReference

LCL1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.42438727088598
p value: 0.0103789964446959
refers to: 250972_at
refers to: LCL1
t statistic: -5.24349100088285

AT-HSFA7B
type: EnsemblDatabaseReference

AT3G29760
type: EnsemblDatabaseReference

AT4G16190
type: EnsemblDatabaseReference

CYP81F2
type: EnsemblDatabaseReference

AT2G21640
type: EnsemblDatabaseReference

ATEM6
type: EnsemblDatabaseReference

266544_at
type: EFO_0005072
part of: A-AFFY-2

GA4H UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.09929540350744
p value: 6.21757337851341E-4
refers to: GA4H
refers to: 260300_at
t statistic: 17.4076266947591

264653_at
type: EFO_0005072
part of: A-AFFY-2

252677_at
type: EFO_0005072
part of: A-AFFY-2

266415_at
type: EFO_0005072
part of: A-AFFY-2

258123_at
type: EFO_0005072
part of: A-AFFY-2

267461_at
type: EFO_0005072
part of: A-AFFY-2

260427_at
type: EFO_0005072
part of: A-AFFY-2

RPL3B
type: EnsemblDatabaseReference

AT1G27990
type: EnsemblDatabaseReference

ATMPK2
type: EnsemblDatabaseReference

264524_at
type: EFO_0005072
part of: A-AFFY-2

DREB2D
type: EnsemblDatabaseReference

AT3G03590 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.29477440647935
p value: 0.00712780775009874
refers to: 259171_at
refers to: AT3G03590
t statistic: -5.96517741599548

254341_at
type: EFO_0005072
part of: A-AFFY-2

260300_at
type: EFO_0005072
part of: A-AFFY-2

263677_at
type: EFO_0005072
part of: A-AFFY-2

249127_at
type: EFO_0005072
part of: A-AFFY-2

MYB73
type: EnsemblDatabaseReference

259040_at
type: EFO_0005072
part of: A-AFFY-2

HAT3
type: EnsemblDatabaseReference

VRN5
type: EnsemblDatabaseReference

AT4G20930
type: EnsemblDatabaseReference

ATGSTU27
type: EnsemblDatabaseReference

AT4G22190
type: EnsemblDatabaseReference

253494_at
type: EFO_0005072
part of: A-AFFY-2

anac053
type: EnsemblDatabaseReference

AT1G32860
type: EnsemblDatabaseReference

AT4G18650 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.37072742437111
p value: 0.00194108865771302
refers to: AT4G18650
refers to: 254634_at
t statistic: -9.97883645329887

CP1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.4509012027983
p value: 0.00157400087891326
refers to: CP1
refers to: 246250_at
t statistic: 11.2292116888221

AT3G08810
type: EnsemblDatabaseReference

AT2G42950
type: EnsemblDatabaseReference

248253_at
type: EFO_0005072
part of: A-AFFY-2

AT5G44260 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.96844777625015
p value: 0.0075178307572651
refers to: AT5G44260
refers to: 249065_at
t statistic: -5.83262992632964

SKIP27
type: EnsemblDatabaseReference

252348_at
type: EFO_0005072
part of: A-AFFY-2

XTR6
type: EnsemblDatabaseReference

265339_at
type: EFO_0005072
part of: A-AFFY-2

GLO5 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.70461016682794
p value: 0.00179386008203605
refers to: 254630_at
refers to: GLO5
t statistic: -10.4316238850023

AT3G03060 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09164518092043
p value: 0.0167615633285656
refers to: AT3G03060
refers to: 258871_at
t statistic: 4.47632470814878

YLS2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.99823206263894
p value: 0.016153549333652
refers to: YLS2
refers to: 252117_at
t statistic: -4.53040901059741

265926_at
type: EFO_0005072
part of: A-AFFY-2

265067_at
type: EFO_0005072
part of: A-AFFY-2

UGT76C4
type: EnsemblDatabaseReference

CYP707A2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.23969123470257
p value: 0.00582272721053751
refers to: CYP707A2
refers to: 266778_at
t statistic: 6.45016205148931

ZAT5
type: EnsemblDatabaseReference

HLS1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.48681987459854
p value: 0.0198756783898842
refers to: HLS1
refers to: 253054_at
t statistic: 4.23466379686169

G-TMT
type: EnsemblDatabaseReference

249784_at
type: EFO_0005072
part of: A-AFFY-2

261999_at
type: EFO_0005072
part of: A-AFFY-2

UGT73B4
type: EnsemblDatabaseReference

245803_at
type: EFO_0005072
part of: A-AFFY-2

251374_at
type: EFO_0005072
part of: A-AFFY-2

260413_at
type: EFO_0005072
part of: A-AFFY-2

256073_at
type: EFO_0005072
part of: A-AFFY-2

CP12-3
type: EnsemblDatabaseReference

AT3G11600
type: EnsemblDatabaseReference

AT3G15450 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.41704764183292
p value: 0.00109248354569113
refers to: AT3G15450
refers to: 258402_at
t statistic: -13.3343625502253

PIRL8 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.52247271575484
p value: 0.0452580844588298
refers to: PIRL8
refers to: 254013_at
t statistic: -3.25567636014033

255471_at
type: EFO_0005072
part of: A-AFFY-2

264508_at
type: EFO_0005072
part of: A-AFFY-2

GEK1
type: EnsemblDatabaseReference

RABC2b
type: EnsemblDatabaseReference

PRA1.B4
type: EnsemblDatabaseReference

251959_at
type: EFO_0005072
part of: A-AFFY-2

260141_at
type: EFO_0005072
part of: A-AFFY-2

AT1G80850
type: EnsemblDatabaseReference

255614_at
type: EFO_0005072
part of: A-AFFY-2

GA2
type: EnsemblDatabaseReference

251245_at
type: EFO_0005072
part of: A-AFFY-2

AT2G24550 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.84223214916854
p value: 0.016202008731543
refers to: AT2G24550
refers to: 263799_at
t statistic: 4.52563814732972

AT3G53040
type: EnsemblDatabaseReference

HIPL1
type: EnsemblDatabaseReference

AT1G72430
type: EnsemblDatabaseReference

AT1G01240
type: EnsemblDatabaseReference

253480_at
type: EFO_0005072
part of: A-AFFY-2

AML2
type: EnsemblDatabaseReference

265425_at
type: EFO_0005072
part of: A-AFFY-2

262517_at
type: EFO_0005072
part of: A-AFFY-2

ATTIM17-1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02764562227746
p value: 0.022955355173672
refers to: ATTIM17-1
refers to: 255941_at
t statistic: 4.04740302623757

ATST2A
type: EnsemblDatabaseReference

AT2G29300
type: EnsemblDatabaseReference

SIB2
type: EnsemblDatabaseReference

NIT3
type: EnsemblDatabaseReference

AT2G40475 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.07925697165432
p value: 0.021974317054303
refers to: AT2G40475
refers to: 255825_at
t statistic: 4.10394032391319

258322_at
type: EFO_0005072
part of: A-AFFY-2

SKIP20
type: EnsemblDatabaseReference

ATFH4
type: EnsemblDatabaseReference

AT2G45210
type: EnsemblDatabaseReference

258764_at
type: EFO_0005072
part of: A-AFFY-2

D-CDES
type: EnsemblDatabaseReference

ALDH12A1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10050666951351
p value: 0.0280979322175057
refers to: ALDH12A1
refers to: 247436_at
t statistic: -3.79240601606618

GASA2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -4.12878981270421
p value: 0.00153170446383341
refers to: 255049_at
refers to: GASA2
t statistic: -11.7088480608584

AT4G01450
type: EnsemblDatabaseReference

AGP21
type: EnsemblDatabaseReference

GRXC6
type: EnsemblDatabaseReference

AT4G19420
type: EnsemblDatabaseReference

AT2G28400 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.33006410121573
p value: 0.00153943149194439
refers to: AT2G28400
refers to: 265276_at
t statistic: -11.5206215278739

AT1G60060 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04127628384411
p value: 0.00372346142668627
refers to: AT1G60060
refers to: 263738_at
t statistic: 7.70132287591453

LEA
type: EnsemblDatabaseReference

ATUPS5
type: EnsemblDatabaseReference

AT4G10490 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12903387051012
p value: 0.0213710925261908
refers to: 254974_at
refers to: AT4G10490
t statistic: -4.14273919131646

AT1G32740
type: EnsemblDatabaseReference

AT1G52710
type: EnsemblDatabaseReference

AT1G23070 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.78316582730696
p value: 0.0065207692916501
refers to: AT1G23070
refers to: 264888_at
t statistic: -6.15307712742189

266097_at
type: EFO_0005072
part of: A-AFFY-2

AT5G38780
type: EnsemblDatabaseReference

AT3G58200
type: EnsemblDatabaseReference

AT3G18570
type: EnsemblDatabaseReference

ZW9
type: EnsemblDatabaseReference

261985_at
type: EFO_0005072
part of: A-AFFY-2

267286_at
type: EFO_0005072
part of: A-AFFY-2

RALFL33 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14417383704979
p value: 0.0487696293926251
refers to: RALFL33
refers to: 245334_at
t statistic: 3.17217571027431

AT4G31270
type: EnsemblDatabaseReference

AT3G10930
type: EnsemblDatabaseReference

AtSTS
type: EnsemblDatabaseReference

(Assay) pil5, red light, biological rep2
type: Assay
identifier: pil5, red light, biological rep2
has participant: A-AFFY-2

ENODL18 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.70294009588205
p value: 0.00153170446383341
refers to: ENODL18
refers to: 261745_at
t statistic: 11.7792422416377

AT2G30990 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12405728006699
p value: 0.0138292711758982
refers to: AT2G30990
refers to: 267199_at
t statistic: -4.77333121689755

RSW10 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.64529515150436
p value: 0.00116220300766982
refers to: 259749_at
refers to: RSW10
t statistic: 12.9244433306424

AT5G44260
type: EnsemblDatabaseReference

263647_at
type: EFO_0005072
part of: A-AFFY-2

LEA18
type: EnsemblDatabaseReference

UGP2
type: EnsemblDatabaseReference

255500_at
type: EFO_0005072
part of: A-AFFY-2

BT2
type: EnsemblDatabaseReference

264836_at
type: EFO_0005072
part of: A-AFFY-2

255797_at
type: EFO_0005072
part of: A-AFFY-2

RD19
type: EnsemblDatabaseReference

261901_at
type: EFO_0005072
part of: A-AFFY-2

PV42B DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.92157093853552
p value: 0.00383958112043112
refers to: PV42B
refers to: 262069_at
t statistic: -7.618471373874

HIPL1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00412481176226
p value: 0.00598736247872749
refers to: HIPL1
refers to: 262215_at
t statistic: -6.36657031300454

AT1G16770
type: EnsemblDatabaseReference

PP2A10
type: EnsemblDatabaseReference

RPL22A
type: EnsemblDatabaseReference

AT1G64270
type: EnsemblDatabaseReference

DIN2
type: EnsemblDatabaseReference

263175_at
type: EFO_0005072
part of: A-AFFY-2

AT1G80180
type: EnsemblDatabaseReference

AT4G02690 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.05616222534772
p value: 0.0059773989021924
refers to: AT4G02690
refers to: 255493_at
t statistic: -6.36978751504972

ATPER1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.586350035606
p value: 0.00835810484353812
refers to: ATPER1
refers to: 260716_at
t statistic: -5.62386163856129

AT4G34630
type: EnsemblDatabaseReference

254424_at
type: EFO_0005072
part of: A-AFFY-2

ACLA-1
type: EnsemblDatabaseReference

ATBCA6
type: EnsemblDatabaseReference

264777_at
type: EFO_0005072
part of: A-AFFY-2

VIT1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01502450771921
p value: 0.00300433859295874
refers to: VIT1
refers to: 265863_at
t statistic: -8.30380597170207

CYP71B34 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.54624950109278
p value: 0.0098230370550961
refers to: 256870_at
refers to: CYP71B34
t statistic: -5.32463852001285

250642_at
type: EFO_0005072
part of: A-AFFY-2

AT1G55760
type: EnsemblDatabaseReference

CYP96A12
type: EnsemblDatabaseReference

BHLH149
type: EnsemblDatabaseReference

ATMSRB9
type: EnsemblDatabaseReference

AT2G42190
type: EnsemblDatabaseReference

GA4
type: EnsemblDatabaseReference

ATGID1A
type: EnsemblDatabaseReference

AT5G55180
type: EnsemblDatabaseReference

PROT1
type: EnsemblDatabaseReference

ATFP3
type: EnsemblDatabaseReference

HMT3
type: EnsemblDatabaseReference

262786_at
type: EFO_0005072
part of: A-AFFY-2

(Assay) Col-0, red light, biological rep3
type: Assay
identifier: Col-0, red light, biological rep3
has participant: A-AFFY-2

AT3G52060 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08297968321653
p value: 0.00164850651749369
refers to: AT3G52060
refers to: 252040_at
t statistic: -10.9632535016482

256528_at
type: EFO_0005072
part of: A-AFFY-2

PPD4 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.39506354590465
p value: 0.00721294552294115
refers to: PPD4
refers to: 264959_at
t statistic: -5.93108263083496

WR3
type: EnsemblDatabaseReference

LACS2
type: EnsemblDatabaseReference

AT3G53040 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.69387236353592
p value: 0.0494981863774336
refers to: AT3G53040
refers to: 252019_at
t statistic: 5.24227450021489

TPS22
type: EnsemblDatabaseReference

PIL5
type: EnsemblDatabaseReference

FH2
type: EnsemblDatabaseReference

262215_at
type: EFO_0005072
part of: A-AFFY-2

TIM14-2
type: EnsemblDatabaseReference

AT2G21820
type: EnsemblDatabaseReference

THA1 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.35153564973342
p value: 0.0235951365086443
refers to: THA1
refers to: 264777_at
t statistic: 7.37361539561523

COL3
type: EnsemblDatabaseReference

ATUTR3
type: EnsemblDatabaseReference

248551_at
type: EFO_0005072
part of: A-AFFY-2

260081_at
type: EFO_0005072
part of: A-AFFY-2

251899_at
type: EFO_0005072
part of: A-AFFY-2

RTFL8
type: EnsemblDatabaseReference

MDR4 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.70103148403326
p value: 0.0180332279725693
refers to: MDR4
refers to: 266752_at
t statistic: 4.37740716397916

GA4 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.54626815790009
p value: 0.00527452927337152
refers to: GA4
refers to: 261768_at
t statistic: 6.71617694846218

XRI
type: EnsemblDatabaseReference

AT4G33960
type: EnsemblDatabaseReference

PV42B
type: EnsemblDatabaseReference

AT2G29670
type: EnsemblDatabaseReference

266654_at
type: EFO_0005072
part of: A-AFFY-2

251330_at
type: EFO_0005072
part of: A-AFFY-2

AT1G30200
type: EnsemblDatabaseReference

253806_at
type: EFO_0005072
part of: A-AFFY-2

URH1
type: EnsemblDatabaseReference

ATTPC1
type: EnsemblDatabaseReference

AT3G17780
type: EnsemblDatabaseReference

262899_at
type: EFO_0005072
part of: A-AFFY-2

AT1G80440 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.19495695604628
p value: 0.0113833369017984
refers to: 260287_at
refers to: AT1G80440
t statistic: 5.08879441955851

254580_at
type: EFO_0005072
part of: A-AFFY-2

262185_at
type: EFO_0005072
part of: A-AFFY-2

WR3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06245630315104
p value: 0.0065207692916501
refers to: 248551_at
refers to: WR3
t statistic: 6.15461933464628

AT2G26190
type: EnsemblDatabaseReference

256371_at
type: EFO_0005072
part of: A-AFFY-2

AT2G25890 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4244396981742
p value: 0.0173193148122049
refers to: AT2G25890
refers to: 266654_at
t statistic: -4.43258772092158

254723_at
type: EFO_0005072
part of: A-AFFY-2

PRA1.B4 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02829089386102
p value: 0.0189923620040383
refers to: 267055_at
refers to: PRA1.B4
t statistic: 4.30382439030999

VTE1
type: EnsemblDatabaseReference

MYB73 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.28381490974649
p value: 0.00268155020081084
refers to: MYB73
refers to: 246253_at
t statistic: -8.64372722098411

AT2G46690 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15492412291517
p value: 0.012461918888408
refers to: AT2G46690
refers to: 266322_at
t statistic: -4.94446625656528

RCE2
type: EnsemblDatabaseReference

ATL68 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.05253620658268
p value: 0.00973484079333581
refers to: ATL68
refers to: 251330_at
t statistic: 5.34445757694766

AT1G23040 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13680159542908
p value: 0.0118905346807569
refers to: AT1G23040
refers to: 264894_at
t statistic: 5.02134748510208

AT4G34480 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14033544046409
p value: 0.0193319994442992
refers to: AT4G34480
refers to: 253238_at
t statistic: -4.2745345664445

EXO DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21863839034902
p value: 0.0300701030125492
refers to: EXO
refers to: 255064_at
t statistic: -3.7096251252738

ATGSTU16
type: EnsemblDatabaseReference

CYP81F4
type: EnsemblDatabaseReference

AT4G10270 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.66684925707911
p value: 0.00157400087891326
refers to: 255807_at
refers to: AT4G10270
t statistic: 11.1635343782323

AT1G80180 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08242095027511
p value: 0.0180543131413354
refers to: 262049_at
refers to: AT1G80180
t statistic: -4.37561978999025

LBD41 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.47795638701704
p value: 0.0139191012976073
refers to: LBD41
refers to: 258487_at
t statistic: 4.76164080502982

(Assay) pil5, dark, biological rep3
type: Assay
identifier: pil5, dark, biological rep3
has participant: A-AFFY-2

257429_at
type: EFO_0005072
part of: A-AFFY-2

251443_at
type: EFO_0005072
part of: A-AFFY-2

SSI2
type: EnsemblDatabaseReference

AT1G75580 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.46651421765611
p value: 0.0165075932333406
refers to: 257460_at
refers to: AT1G75580
t statistic: 4.50143682966086

256827_at
type: EFO_0005072
part of: A-AFFY-2

AT3G52470
type: EnsemblDatabaseReference

AT2G42000
type: EnsemblDatabaseReference

245627_at
type: EFO_0005072
part of: A-AFFY-2

AT1G56220
type: EnsemblDatabaseReference

259664_at
type: EFO_0005072
part of: A-AFFY-2

AO UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.68853698718044
p value: 0.00565259181206291
refers to: 246597_at
refers to: AO
t statistic: 6.55414994577049

ATAMY3
type: EnsemblDatabaseReference

AT4G34480
type: EnsemblDatabaseReference

AT2G40230
type: EnsemblDatabaseReference

AT4G05070 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11628847300864
p value: 0.00311893863335331
refers to: 255255_at
refers to: AT4G05070
t statistic: -8.17842590819013

AT5G53220
type: EnsemblDatabaseReference

AT3G29760 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04247977772169
p value: 0.00370742435841991
refers to: AT3G29760
refers to: 257285_at
t statistic: 7.74439033812261

GH3.1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.72590523966324
p value: 0.00414465909000732
refers to: 266611_at
refers to: GH3.1
t statistic: 7.38516655693884

266540_at
type: EFO_0005072
part of: A-AFFY-2

AGK2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01754260896995
p value: 0.0150175061199014
refers to: 251643_at
refers to: AGK2
t statistic: 4.63429246365555

262414_at
type: EFO_0005072
part of: A-AFFY-2

AT3G61870 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.32285147248124
p value: 0.00483451240643357
refers to: 251243_at
refers to: AT3G61870
t statistic: -6.95226030159448

NUDX25
type: EnsemblDatabaseReference

246986_at
type: EFO_0005072
part of: A-AFFY-2

AT4G33800
type: EnsemblDatabaseReference

AT2G36220
type: EnsemblDatabaseReference

AT1G68670
type: EnsemblDatabaseReference

AAT1
type: EnsemblDatabaseReference

ATAF1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17009921897876
p value: 0.00217754393876776
refers to: ATAF1
refers to: 261564_at
t statistic: -9.44849205504774

RGL1
type: EnsemblDatabaseReference

ATRBL14
type: EnsemblDatabaseReference

CYP71B2
type: EnsemblDatabaseReference

AT4G16770
type: EnsemblDatabaseReference

SHL1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12020143277001
p value: 0.0243194545692114
refers to: SHL1
refers to: 252925_at
t statistic: -3.96456026299218

262069_at
type: EFO_0005072
part of: A-AFFY-2

APA2
type: EnsemblDatabaseReference

249937_at
type: EFO_0005072
part of: A-AFFY-2

B5 #6
type: EnsemblDatabaseReference

XTR2
type: EnsemblDatabaseReference

T24C20_20 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.37088805706594
p value: 0.00675473606639885
refers to: T24C20_20
refers to: 252348_at
t statistic: 6.05131007647959

AT5G47440
type: EnsemblDatabaseReference

AT1G74940
type: EnsemblDatabaseReference

AT2G22080 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0282187202553
p value: 0.0121418669995136
refers to: 263352_at
refers to: AT2G22080
t statistic: -4.98492487529134

UP6 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12987718985254
p value: 0.0365278851020366
refers to: UP6
refers to: 255763_at
t statistic: -3.48721726025673

254607_at
type: EFO_0005072
part of: A-AFFY-2

ATGSTU16 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15310321021681
p value: 0.00391382855743663
refers to: 262916_at
refers to: ATGSTU16
t statistic: -7.53759451821291

AT2G03410 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.17603683261404
p value: 0.0186030623152229
refers to: 265705_at
refers to: AT2G03410
t statistic: 4.33111677386198

AT2G19320 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.46253929333302
p value: 0.00176067208436504
refers to: AT2G19320
refers to: 267321_at
t statistic: -10.4912816539717

PME25 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.84201962139614
p value: 0.0477151549047766
refers to: PME25
refers to: 258764_at
t statistic: -5.33469041837247

AGO2
type: EnsemblDatabaseReference

AT3G58450
type: EnsemblDatabaseReference

249123_at
type: EFO_0005072
part of: A-AFFY-2

SUS3
type: EnsemblDatabaseReference

247946_at
type: EFO_0005072
part of: A-AFFY-2

AT5G45670
type: EnsemblDatabaseReference

ATTI2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15941902962155
p value: 0.024131879317386
refers to: ATTI2
refers to: 260546_at
t statistic: -3.97695473686144

AT-HSFA7B
type: EnsemblDatabaseReference

AT1G28600
type: EnsemblDatabaseReference

AT3G29760
type: EnsemblDatabaseReference

AT4G16190
type: EnsemblDatabaseReference

AT2G03410
type: EnsemblDatabaseReference

251155_at
type: EFO_0005072
part of: A-AFFY-2

CYP81F2
type: EnsemblDatabaseReference

AT2G21640
type: EnsemblDatabaseReference

ALPHA-VPE
type: EnsemblDatabaseReference

AT3G09600 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.42978458732081
p value: 0.0333852662291076
refers to: AT3G09600
refers to: 258723_at
t statistic: -3.58739680138587

PATL2
type: EnsemblDatabaseReference

H2B DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.27545202066558
p value: 0.00600024799839822
refers to: 252561_at
refers to: H2B
t statistic: -6.35994515839004

246528_at
type: EFO_0005072
part of: A-AFFY-2

BGLU19
type: EnsemblDatabaseReference

259519_at
type: EFO_0005072
part of: A-AFFY-2

Phox4
type: EnsemblDatabaseReference

262842_at
type: EFO_0005072
part of: A-AFFY-2

251642_at
type: EFO_0005072
part of: A-AFFY-2

ATST2B DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.26192845630286
p value: 0.0115288974105456
refers to: 250657_at
refers to: ATST2B
t statistic: -5.06925165021031

ATL68
type: EnsemblDatabaseReference

TCH2
type: EnsemblDatabaseReference

TRFL10 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.29262963231841
p value: 0.0135770588320156
refers to: TRFL10
refers to: 250914_at
t statistic: 4.80323113899051

AT4G16140 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15426437107412
p value: 0.0229628840405313
refers to: AT4G16140
refers to: 245479_at
t statistic: 4.04639229396419

261011_at
type: EFO_0005072
part of: A-AFFY-2

AT2G40230 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04273959842483
p value: 0.00153170446383341
refers to: AT2G40230
refers to: 263382_at
t statistic: 11.6455626810497

ERF023 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.207001287236
p value: 0.00926522844788362
refers to: ERF023
refers to: 261059_at
t statistic: -5.43782858526552

253161_at
type: EFO_0005072
part of: A-AFFY-2

AT4G25330
type: EnsemblDatabaseReference

263931_at
type: EFO_0005072
part of: A-AFFY-2

AT1G25275 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.68771530293284
p value: 0.00201438534069138
refers to: AT1G25275
refers to: 245642_at
t statistic: -9.82215121576472

263929_at
type: EFO_0005072
part of: A-AFFY-2

MYB73
type: EnsemblDatabaseReference

HAT3
type: EnsemblDatabaseReference

ATGSTU27
type: EnsemblDatabaseReference

AT3G04890 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.05489436520625
p value: 0.0105056906890055
refers to: AT3G04890
refers to: 259091_at
t statistic: -5.22527009053533

MAPKKK20 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.81041354755049
p value: 0.00182095596064027
refers to: MAPKKK20
refers to: 252212_at
t statistic: 10.25333161818

anac053
type: EnsemblDatabaseReference

GEK1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0648001791399
p value: 0.00630186606105191
refers to: GEK1
refers to: 264032_at
t statistic: 6.25243948195698

ABF4 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.49611283368075
p value: 0.00972180007809728
refers to: 258026_at
refers to: ABF4
t statistic: -5.34645944113598

TSO2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.48764233731104
p value: 0.0191518026930857
refers to: 257809_at
refers to: TSO2
t statistic: 4.28654416868759

AT1G71870 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.11008331721315
p value: 0.0178346902385927
refers to: AT1G71870
refers to: 261514_at
t statistic: 4.39237290404702

AT2G42950
type: EnsemblDatabaseReference

AT1G49150 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.32512328786492
p value: 0.0401434376049803
refers to: AT1G49150
refers to: 260761_at
t statistic: 3.37862465353482

AT3G26770
type: EnsemblDatabaseReference

AtCYS2
type: EnsemblDatabaseReference

263702_at
type: EFO_0005072
part of: A-AFFY-2

AT5G38780 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.76862864222538
p value: 0.0108996599956171
refers to: AT5G38780
refers to: 249532_at
t statistic: -5.16536855864429

ECA2
type: EnsemblDatabaseReference

ATEXPA10
type: EnsemblDatabaseReference

(Sample) developmental stage/seed
type: EFO_0000991
property type: developmental stage
property value: seed

AT2G32560
type: EnsemblDatabaseReference

ALC DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1454703133852
p value: 0.0235951365086443
refers to: ALC
refers to: 247035_at
t statistic: -7.32502482019422

ZAT5
type: EnsemblDatabaseReference

SRF8
type: EnsemblDatabaseReference

264032_at
type: EFO_0005072
part of: A-AFFY-2

AtSIP1
type: EnsemblDatabaseReference

NLP8
type: EnsemblDatabaseReference

UGT73B4
type: EnsemblDatabaseReference

AT3G55910
type: EnsemblDatabaseReference

266265_at
type: EFO_0005072
part of: A-AFFY-2

255578_at
type: EFO_0005072
part of: A-AFFY-2

VTE1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14050231134589
p value: 0.00217433390674047
refers to: VTE1
refers to: 253394_at
t statistic: -9.50160148794867

NAP UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13556719979136
p value: 0.00521788393112522
refers to: NAP
refers to: 256300_at
t statistic: 6.76362327698007

264617_at
type: EFO_0005072
part of: A-AFFY-2

CP12-3
type: EnsemblDatabaseReference

AT3G11600
type: EnsemblDatabaseReference

255723_at
type: EFO_0005072
part of: A-AFFY-2

261294_at
type: EFO_0005072
part of: A-AFFY-2

GLO5
type: EnsemblDatabaseReference

AT1G80850
type: EnsemblDatabaseReference

ARO3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.17792441680185
p value: 0.0299235649174941
refers to: ARO3
refers to: 253124_at
t statistic: 3.7192356537581

PDF2.3
type: EnsemblDatabaseReference

AT3G53040
type: EnsemblDatabaseReference

264959_at
type: EFO_0005072
part of: A-AFFY-2

247331_at
type: EFO_0005072
part of: A-AFFY-2

HIPL1
type: EnsemblDatabaseReference

266580_at
type: EFO_0005072
part of: A-AFFY-2

E2F3
type: EnsemblDatabaseReference

AT2G29300
type: EnsemblDatabaseReference

DIC2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.41762369248438
p value: 0.00231394268481607
refers to: 254120_at
refers to: DIC2
t statistic: 9.0760543451813

ATST2A
type: EnsemblDatabaseReference

GASA2
type: EnsemblDatabaseReference

AT4G27530
type: EnsemblDatabaseReference

CP12-3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01392839364873
p value: 0.00954473226331806
refers to: CP12-3
refers to: 259976_at
t statistic: -5.38957537049235

ATFH4
type: EnsemblDatabaseReference

AT2G45210
type: EnsemblDatabaseReference

253458_at
type: EFO_0005072
part of: A-AFFY-2

D-CDES
type: EnsemblDatabaseReference

ATMPK1
type: EnsemblDatabaseReference

AT3G15290 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.30226541429665
p value: 0.00654879582951588
refers to: AT3G15290
refers to: 257052_at
t statistic: -6.1431812255333

CFIM-25
type: EnsemblDatabaseReference

263985_at
type: EFO_0005072
part of: A-AFFY-2

ELP DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.27423511548917
p value: 0.0235951365086443
refers to: 264371_at
refers to: ELP
t statistic: -7.81879784605162

XRI UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.52692110943602
p value: 0.0102658086344469
refers to: XRI
refers to: 248668_at
t statistic: 5.26655674732618

AT1G32740
type: EnsemblDatabaseReference

AT1G52710
type: EnsemblDatabaseReference

AT5G38780
type: EnsemblDatabaseReference

AT3G58200
type: EnsemblDatabaseReference

AtSIP1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.70910088736376
p value: 0.041945286601701
refers to: 264532_at
refers to: AtSIP1
t statistic: 3.33031934269162

RGL1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03930591873358
p value: 0.00273926796085239
refers to: RGL1
refers to: 260141_at
t statistic: 8.58205738003939

(Sample) genotype/pil5-1
type: EFO_0000001
property type: genotype
property value: pil5-1

ZW9
type: EnsemblDatabaseReference

AT1G52710 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04294691728255
p value: 0.0087317781333208
refers to: AT1G52710
refers to: 262153_at
t statistic: -5.53529954784971

AT2G42000 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.45890062559308
p value: 0.0051496373673126
refers to: AT2G42000
refers to: 267579_at
t statistic: -6.78836252363226

AT2G27500
type: EnsemblDatabaseReference

AT3G10930
type: EnsemblDatabaseReference

AT2G38820
type: EnsemblDatabaseReference

261523_at
type: EFO_0005072
part of: A-AFFY-2

AT2G15695 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.29659012077459
p value: 0.00722277454576419
refers to: 265495_at
refers to: AT2G15695
t statistic: -5.92087940498744

CMTA4 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.44630490791012
p value: 0.00690949851668203
refers to: 264999_at
refers to: CMTA4
t statistic: -6.01454582903151

AT2G28490 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.7898580051189
p value: 0.00534966878276993
refers to: 264079_at
refers to: AT2G28490
t statistic: -6.67491400008859

DIC2
type: EnsemblDatabaseReference

261865_at
type: EFO_0005072
part of: A-AFFY-2

SIB2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.34900685582215
p value: 0.0121564633790116
refers to: SIB2
refers to: 267084_at
t statistic: -4.98084983451735

AT2G41640
type: EnsemblDatabaseReference

BT2
type: EnsemblDatabaseReference

251925_at
type: EFO_0005072
part of: A-AFFY-2

SESA1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23455399669933
p value: 0.0065207692916501
refers to: 253904_at
refers to: SESA1
t statistic: -6.17386289429816

AT1G14910 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21410554484468
p value: 0.00444702810750309
refers to: 262856_at
refers to: AT1G14910
t statistic: -7.14894037128744

267309_at
type: EFO_0005072
part of: A-AFFY-2

AT1G15740 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.00836233927636
p value: 0.00513888005790691
refers to: AT1G15740
refers to: 259500_at
t statistic: -6.8092243591656

RD19
type: EnsemblDatabaseReference

GRXS13 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.18415545193379
p value: 0.0231207000201919
refers to: GRXS13
refers to: 265067_at
t statistic: -8.66656143451499

AT2G19810 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.43376233991362
p value: 0.0149518398229786
refers to: AT2G19810
refers to: 266695_at
t statistic: -4.6445538959683

AT2G17660
type: EnsemblDatabaseReference

AT5G01670
type: EnsemblDatabaseReference

ATFER2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0472297294872
p value: 0.00264870308681701
refers to: ATFER2
refers to: 256416_at
t statistic: -8.6850057886775

258857_at
type: EFO_0005072
part of: A-AFFY-2

260005_at
type: EFO_0005072
part of: A-AFFY-2

PP2A10
type: EnsemblDatabaseReference

AT2G30600
type: EnsemblDatabaseReference

H2B
type: EnsemblDatabaseReference

RPL22A
type: EnsemblDatabaseReference

PIMT2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.67609186759907
p value: 7.60827748523182E-4
refers to: 248544_at
refers to: PIMT2
t statistic: -15.170531641026

ATTPS6 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.62203559631579
p value: 0.00109248354569113
refers to: ATTPS6
refers to: 260010_at
t statistic: -13.2882637276914

252300_at
type: EFO_0005072
part of: A-AFFY-2

248817_at
type: EFO_0005072
part of: A-AFFY-2

GASA3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.39485465418641
p value: 0.0128985422868012
refers to: GASA3
refers to: 255048_at
t statistic: -4.88626759426111

255822_at
type: EFO_0005072
part of: A-AFFY-2

267381_at
type: EFO_0005072
part of: A-AFFY-2

AT5G15640 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.41237183157721
p value: 0.00879377057786406
refers to: AT5G15640
refers to: 246528_at
t statistic: 5.51702309684889

267524_at
type: EFO_0005072
part of: A-AFFY-2

AT1G21680
type: EnsemblDatabaseReference

AT4G34630
type: EnsemblDatabaseReference

RTNLB13 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16823668256612
p value: 0.0105840081709568
refers to: RTNLB13
refers to: 267286_at
t statistic: -5.21355201295685

DYL1
type: EnsemblDatabaseReference

ACLA-1
type: EnsemblDatabaseReference

ATMGL DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.0299943250365
p value: 0.00534966878276993
refers to: ATMGL
refers to: 261957_at
t statistic: -6.68854153387757

255550_at
type: EFO_0005072
part of: A-AFFY-2

ATBCA6
type: EnsemblDatabaseReference

ILL6 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.07398794141666
p value: 0.00458834218278393
refers to: ILL6
refers to: 245244_at
t statistic: -7.06207835657406

253215_at
type: EFO_0005072
part of: A-AFFY-2

RTFL8 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.25741409596115
p value: 0.00157400087891326
refers to: RTFL8
refers to: 267591_at
t statistic: 11.2367958577805

AT5G14390
type: EnsemblDatabaseReference

HAT1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.07257244949707
p value: 0.0394877703279356
refers to: 245362_at
refers to: HAT1
t statistic: 3.3997302809034

AT5G14390 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15291742839761
p value: 0.0127063489797523
refers to: AT5G14390
refers to: 250175_at
t statistic: -4.91845422946273

260662_at
type: EFO_0005072
part of: A-AFFY-2

URH1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06168000628924
p value: 0.00194108865771302
refers to: 263929_at
refers to: URH1
t statistic: 10.0542543599693

YLS2
type: EnsemblDatabaseReference

CYP96A12
type: EnsemblDatabaseReference

BHLH149
type: EnsemblDatabaseReference

PLP9 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.25100530074344
p value: 0.0181575330400467
refers to: PLP9
refers to: 251174_at
t statistic: 4.36536328311671

GA4
type: EnsemblDatabaseReference

AT1G72800
type: EnsemblDatabaseReference

ATGID1A
type: EnsemblDatabaseReference

AT5G55180
type: EnsemblDatabaseReference

ATFP3
type: EnsemblDatabaseReference

HMT3
type: EnsemblDatabaseReference

NSFBX DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.81230491627417
p value: 0.00155308437768077
refers to: NSFBX
refers to: 250874_at
t statistic: -11.3728434248964

LACS2
type: EnsemblDatabaseReference

ATMES10 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.62712202031171
p value: 0.00651552297673325
refers to: ATMES10
refers to: 252168_at
t statistic: 6.18090430706574

261749_at
type: EFO_0005072
part of: A-AFFY-2

253285_at
type: EFO_0005072
part of: A-AFFY-2

TPS22
type: EnsemblDatabaseReference

255763_at
type: EFO_0005072
part of: A-AFFY-2

PIL5
type: EnsemblDatabaseReference

TIM14-2
type: EnsemblDatabaseReference

245136_at
type: EFO_0005072
part of: A-AFFY-2

BETA-TIP
type: EnsemblDatabaseReference

267637_at
type: EFO_0005072
part of: A-AFFY-2

XERICO
type: EnsemblDatabaseReference

AT4G23890 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.39451508183317
p value: 0.00194108865771302
refers to: AT4G23890
refers to: 254187_at
t statistic: -9.99010855156057

253872_at
type: EFO_0005072
part of: A-AFFY-2

PRL2
type: EnsemblDatabaseReference

263955_at
type: EFO_0005072
part of: A-AFFY-2

260875_at
type: EFO_0005072
part of: A-AFFY-2

DOF2.1
type: EnsemblDatabaseReference

ATUTR3
type: EnsemblDatabaseReference

264999_at
type: EFO_0005072
part of: A-AFFY-2

PTP1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04629807630082
p value: 0.00504428614459246
refers to: PTP1
refers to: 261523_at
t statistic: 6.8423066823187

AT3G03320
type: EnsemblDatabaseReference

250250_at
type: EFO_0005072
part of: A-AFFY-2

AT2G46060 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11967328292919
p value: 0.0478364302617166
refers to: 266601_at
refers to: AT2G46060
t statistic: -3.1918558534107

265032_at
type: EFO_0005072
part of: A-AFFY-2

XRI
type: EnsemblDatabaseReference

AT4G33960
type: EnsemblDatabaseReference

ATEXPA3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.450969030514
p value: 0.00222497875680134
refers to: 267158_at
refers to: ATEXPA3
t statistic: 9.28990378817097

SGR2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.47126587267377
p value: 0.00913291877269792
refers to: SGR2
refers to: 256513_at
t statistic: -5.46097656143112

253915_at
type: EFO_0005072
part of: A-AFFY-2

AT3G14880
type: EnsemblDatabaseReference

ATASE2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10712464451198
p value: 0.00217754393876776
refers to: ATASE2
refers to: 253252_at
t statistic: 9.46534121595993

AT3G10200
type: EnsemblDatabaseReference

AT4G25580
type: EnsemblDatabaseReference

AT4G33980 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.80053473968188
p value: 0.00420140663109873
refers to: AT4G33980
refers to: 253322_at
t statistic: -7.33598807832852

264330_at
type: EFO_0005072
part of: A-AFFY-2

258369_at
type: EFO_0005072
part of: A-AFFY-2

AT3G17780
type: EnsemblDatabaseReference

CYP96A11 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45296387552465
p value: 0.00526294050922077
refers to: CYP96A11
refers to: 252898_at
t statistic: 6.74037596297397

AT2G45210 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.30627225055129
p value: 0.00534966878276993
refers to: AT2G45210
refers to: 245136_at
t statistic: -6.68014170031583

264056_at
type: EFO_0005072
part of: A-AFFY-2

253543_at
type: EFO_0005072
part of: A-AFFY-2

265959_at
type: EFO_0005072
part of: A-AFFY-2

XTH33
type: EnsemblDatabaseReference

AT1G60060
type: EnsemblDatabaseReference

VTE1
type: EnsemblDatabaseReference

260546_at
type: EFO_0005072
part of: A-AFFY-2

RCE2
type: EnsemblDatabaseReference

PME25
type: EnsemblDatabaseReference

AZF3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.77794162782233
p value: 0.0100524455637572
refers to: 249139_at
refers to: AZF3
t statistic: 5.29243319400829

ASG4
type: EnsemblDatabaseReference

ATGSTU16
type: EnsemblDatabaseReference

AT1G08170 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.51356760971174
p value: 0.00349223617813294
refers to: AT1G08170
refers to: 261755_at
t statistic: -7.92346403961001

CYP81F4
type: EnsemblDatabaseReference

AT1G71000
type: EnsemblDatabaseReference

262310_at
type: EFO_0005072
part of: A-AFFY-2

AT4G36700 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.37258529912845
p value: 6.21757337851341E-4
refers to: AT4G36700
refers to: 246273_at
t statistic: -17.0984464387819

AT5G20880
type: EnsemblDatabaseReference

AT2G42560 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.17679369298161
p value: 0.00109248354569113
refers to: AT2G42560
refers to: 263492_at
t statistic: -13.1757192073342

ATHB54
type: EnsemblDatabaseReference

HDT4
type: EnsemblDatabaseReference

IAA11 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17631823680487
p value: 0.0073166046051147
refers to: IAA11
refers to: 253791_at
t statistic: -5.89854397351502

ENODL8
type: EnsemblDatabaseReference

258727_at
type: EFO_0005072
part of: A-AFFY-2

255647_at
type: EFO_0005072
part of: A-AFFY-2

246309_at
type: EFO_0005072
part of: A-AFFY-2

259302_at
type: EFO_0005072
part of: A-AFFY-2

AT1G56220
type: EnsemblDatabaseReference

CRA1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1922445716919
p value: 0.00674277720305406
refers to: 249082_at
refers to: CRA1
t statistic: -6.0600796576563

AT2G42950 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.52179879633807
p value: 0.00157400087891326
refers to: AT2G42950
refers to: 265269_at
t statistic: -11.3021733474047

252712_at
type: EFO_0005072
part of: A-AFFY-2

259057_at
type: EFO_0005072
part of: A-AFFY-2

248544_at
type: EFO_0005072
part of: A-AFFY-2

260761_at
type: EFO_0005072
part of: A-AFFY-2

ADK UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.05994648308982
p value: 0.00206387023957797
refers to: ADK
refers to: 265958_at
t statistic: 9.6706027039685

TRFL10
type: EnsemblDatabaseReference

CRF3
type: EnsemblDatabaseReference

HDT4 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.25516290693564
p value: 0.00194108865771302
refers to: HDT4
refers to: 266253_at
t statistic: 10.0450125301863

257853_at
type: EFO_0005072
part of: A-AFFY-2

ATAMY3
type: EnsemblDatabaseReference

CID2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.07920474625586
p value: 0.0248541447081853
refers to: CID2
refers to: 245602_at
t statistic: -3.93705178466368

ATTI7
type: EnsemblDatabaseReference

AT1G71000 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45500793488122
p value: 0.0372026072291553
refers to: AT1G71000
refers to: 262307_at
t statistic: 3.46520204664311

AT5G53220
type: EnsemblDatabaseReference

AT1G10050 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.62898097792427
p value: 0.0235951365086443
refers to: AT1G10050
refers to: 264522_at
t statistic: 7.41183594391249

AT1G72100
type: EnsemblDatabaseReference

SOUL-1
type: EnsemblDatabaseReference

AT5G20880 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.19935334080633
p value: 0.0392565264335122
refers to: AT5G20880
refers to: 246193_at
t statistic: 3.40660175926874

258797_at
type: EFO_0005072
part of: A-AFFY-2

255418_at
type: EFO_0005072
part of: A-AFFY-2

261676_at
type: EFO_0005072
part of: A-AFFY-2

CBSCBS2
type: EnsemblDatabaseReference

AT2G42560
type: EnsemblDatabaseReference

LKR/SDH DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.09229479300048
p value: 0.00163802906857956
refers to: LKR/SDH
refers to: 253373_at
t statistic: -10.9972937812665

AAT1
type: EnsemblDatabaseReference

261819_at
type: EFO_0005072
part of: A-AFFY-2

RGL1
type: EnsemblDatabaseReference

254573_at
type: EFO_0005072
part of: A-AFFY-2

ATRBL14
type: EnsemblDatabaseReference

CYP71B2
type: EnsemblDatabaseReference

AT4G16770
type: EnsemblDatabaseReference

252925_at
type: EFO_0005072
part of: A-AFFY-2

Aty2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.41130329301123
p value: 0.0051496373673126
refers to: Aty2
refers to: 262721_at
t statistic: 6.78389279058951

AT4G34950 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.56675043077807
p value: 0.00173961140697183
refers to: 253215_at
refers to: AT4G34950
t statistic: 10.526173112328

256192_at
type: EFO_0005072
part of: A-AFFY-2

AT1G72430 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27354537454604
p value: 0.0177481474731302
refers to: AT1G72430
refers to: 260427_at
t statistic: 4.39887967476589

APA2
type: EnsemblDatabaseReference

258670_at
type: EFO_0005072
part of: A-AFFY-2

GLN1;5 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.33937130869137
p value: 0.0147940425724056
refers to: GLN1;5
refers to: 261305_at
t statistic: -4.66580641381119

RAP2.4 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06125809954017
p value: 0.00504428614459246
refers to: 262135_at
refers to: RAP2.4
t statistic: -6.84422653110885

AT2G38465
type: EnsemblDatabaseReference

AT5G47440
type: EnsemblDatabaseReference

265673_at
type: EFO_0005072
part of: A-AFFY-2

GBF2
type: EnsemblDatabaseReference

AT1G74940
type: EnsemblDatabaseReference

252825_at
type: EFO_0005072
part of: A-AFFY-2

AT4G19390 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.902609028198
p value: 6.21757337851341E-4
refers to: AT4G19390
refers to: 254580_at
t statistic: -17.2933845297461

247441_at
type: EFO_0005072
part of: A-AFFY-2

262049_at
type: EFO_0005072
part of: A-AFFY-2

RPA70C UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.08039172943102
p value: 0.00263809090992342
refers to: 248940_at
refers to: RPA70C
t statistic: 8.74873246585102

AT3G14880 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00251346933862
p value: 0.00841091976009439
refers to: 257234_at
refers to: AT3G14880
t statistic: -5.59865566721475

AGO2
type: EnsemblDatabaseReference

AT3G58450
type: EnsemblDatabaseReference

265573_at
type: EFO_0005072
part of: A-AFFY-2

259143_at
type: EFO_0005072
part of: A-AFFY-2

253155_at
type: EFO_0005072
part of: A-AFFY-2

RPB5D DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17946640464531
p value: 0.0298563242599308
refers to: RPB5D
refers to: 266423_at
t statistic: -3.72292820083716

257279_at
type: EFO_0005072
part of: A-AFFY-2

AT3G12920
type: EnsemblDatabaseReference

ATGID1A DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.19800327193257
p value: 0.00444702810750309
refers to: ATGID1A
refers to: 259302_at
t statistic: -7.15299238128988

AT5G45670
type: EnsemblDatabaseReference

AT4G27280 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.16213025355227
p value: 0.0197758849278804
refers to: AT4G27280
refers to: 253915_at
t statistic: 4.24202957983642

260303_at
type: EFO_0005072
part of: A-AFFY-2

AT1G28600
type: EnsemblDatabaseReference

PYL2
type: EnsemblDatabaseReference

250662_at
type: EFO_0005072
part of: A-AFFY-2

AT2G03410
type: EnsemblDatabaseReference

266733_at
type: EFO_0005072
part of: A-AFFY-2

ATAMI1
type: EnsemblDatabaseReference

AT3G03150 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.19415125831707
p value: 0.00194108865771302
refers to: AT3G03150
refers to: 258845_at
t statistic: -9.98630981903997

AT2G39650
type: EnsemblDatabaseReference

PATL2
type: EnsemblDatabaseReference

(Factor value) GENOTYPE/pil5-1
type: EFO_0000001
property type: GENOTYPE
property value: pil5-1

BGLU19
type: EnsemblDatabaseReference

AT1G05330 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.99037246445777
p value: 0.00256358195818963
refers to: AT1G05330
refers to: 264571_at
t statistic: 8.82474049875353

264597_at
type: EFO_0005072
part of: A-AFFY-2

251749_at
type: EFO_0005072
part of: A-AFFY-2

260616_at
type: EFO_0005072
part of: A-AFFY-2

Phox4
type: EnsemblDatabaseReference

AT4G17840
type: EnsemblDatabaseReference

AT3G18570 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.36915408927376
p value: 0.0259155428544355
refers to: AT3G18570
refers to: 256827_at
t statistic: -3.88786787214196

ATL68
type: EnsemblDatabaseReference

SPPL4 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04201067117805
p value: 0.0207876321396587
refers to: SPPL4
refers to: 257484_at
t statistic: -4.17940478360147

252911_at
type: EFO_0005072
part of: A-AFFY-2

AT2G24550
type: EnsemblDatabaseReference

AT3G16990
type: EnsemblDatabaseReference

AT5G18850 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06461025081378
p value: 0.0206480266509747
refers to: 249978_at
refers to: AT5G18850
t statistic: -4.18739893576206

AT4G12070
type: EnsemblDatabaseReference

ATBS1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.22831442231304
p value: 0.0110066765338846
refers to: ATBS1
refers to: 260230_at
t statistic: 5.15217588430438

262135_at
type: EFO_0005072
part of: A-AFFY-2

PIN1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.33465308916437
p value: 0.00380110432137827
refers to: PIN1
refers to: 259845_at
t statistic: 7.65358004963948

263179_at
type: EFO_0005072
part of: A-AFFY-2

AT4G25330
type: EnsemblDatabaseReference

RTNLB22
type: EnsemblDatabaseReference

AT1G16770 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.84046703411294
p value: 0.00447392936667178
refers to: 255761_at
refers to: AT1G16770
t statistic: -7.11929604931981

245119_at
type: EFO_0005072
part of: A-AFFY-2

251350_at
type: EFO_0005072
part of: A-AFFY-2

PKP4
type: EnsemblDatabaseReference

256221_at
type: EFO_0005072
part of: A-AFFY-2

MERI5B
type: EnsemblDatabaseReference

ATRMA2
type: EnsemblDatabaseReference

IAA30
type: EnsemblDatabaseReference

GATA19
type: EnsemblDatabaseReference

AT1G10050 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.32566512644472
p value: 0.0111156787301597
refers to: 264522_at
refers to: AT1G10050
t statistic: 5.12427073046241

AT1G32740 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.00537654951206
p value: 0.0165299795655952
refers to: 261708_at
refers to: AT1G32740
t statistic: -4.49756160817096

AtCXE5 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.31469328734639
p value: 0.018153807658943
refers to: AtCXE5
refers to: 261607_at
t statistic: -4.3680501739264

AT3G26770
type: EnsemblDatabaseReference

267321_at
type: EFO_0005072
part of: A-AFFY-2

AtCYS2
type: EnsemblDatabaseReference

APL3
type: EnsemblDatabaseReference

ATERD2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.37760815543314
p value: 0.00309157489353878
refers to: 260897_at
refers to: ATERD2
t statistic: -8.20669643865008

PLP
type: EnsemblDatabaseReference

ECA2
type: EnsemblDatabaseReference

ATBRCA1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.87000589184829
p value: 0.0218835553414996
refers to: ATBRCA1
refers to: 254443_at
t statistic: 4.1093345086691

261059_at
type: EFO_0005072
part of: A-AFFY-2

AT2G32560
type: EnsemblDatabaseReference

266617_at
type: EFO_0005072
part of: A-AFFY-2

AT1G80850 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.30309355332214
p value: 0.0306811738195107
refers to: AT1G80850
refers to: 257474_at
t statistic: 3.68870999815055

263537_at
type: EFO_0005072
part of: A-AFFY-2

SRF8
type: EnsemblDatabaseReference

AT1G65090 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1015595199284
p value: 0.00694493760619737
refers to: AT1G65090
refers to: 263138_at
t statistic: -6.0036491977332

262250_at
type: EFO_0005072
part of: A-AFFY-2

263981_at
type: EFO_0005072
part of: A-AFFY-2

AT3G55910 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.116093189618
p value: 0.00527452927337152
refers to: AT3G55910
refers to: 251766_at
t statistic: 6.7177635148026

263979_at
type: EFO_0005072
part of: A-AFFY-2

AT2G38465 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.94047327669056
p value: 0.0155850581107015
refers to: AT2G38465
refers to: 267036_at
t statistic: -4.58513396394172

NLP8
type: EnsemblDatabaseReference

AT3G55910
type: EnsemblDatabaseReference

AOAT2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.07451146830189
p value: 0.00221490301388011
refers to: AOAT2
refers to: 260309_at
t statistic: -9.39243347600755

HGL1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.29155758203198
p value: 0.0359853233152375
refers to: 258109_at
refers to: HGL1
t statistic: -3.50347632084311

259956_at
type: EFO_0005072
part of: A-AFFY-2

267389_at
type: EFO_0005072
part of: A-AFFY-2

263881_at
type: EFO_0005072
part of: A-AFFY-2

CYP71B2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.13864751297676
p value: 0.00660511809677845
refers to: 262826_at
refers to: CYP71B2
t statistic: 6.11503248254864

GLO5
type: EnsemblDatabaseReference

PLP9
type: EnsemblDatabaseReference

AT1G29680
type: EnsemblDatabaseReference

AT3G15780 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.38614723974738
p value: 0.00173961140697183
refers to: AT3G15780
refers to: 258263_at
t statistic: -10.7678321704172

AT4G18920 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16352381542818
p value: 0.0331556441231069
refers to: AT4G18920
refers to: 254607_at
t statistic: -3.59644296863016

PDF2.3
type: EnsemblDatabaseReference

260230_at
type: EFO_0005072
part of: A-AFFY-2

PTP1
type: EnsemblDatabaseReference

AT1G32860 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.42395740273424
p value: 0.0495777300622029
refers to: AT1G32860
refers to: 261187_at
t statistic: 3.1548608846081

E2F3
type: EnsemblDatabaseReference

AT2G41640 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0187695029037
p value: 0.024115242248334
refers to: 245119_at
refers to: AT2G41640
t statistic: 3.9794303407407

AT4G28240 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.27287189225745
p value: 6.63457224921488E-4
refers to: AT4G28240
refers to: 253812_at
t statistic: -16.3913092554879

CID2
type: EnsemblDatabaseReference

264941_at
type: EFO_0005072
part of: A-AFFY-2

RTNLB5 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01909912978248
p value: 0.0189601978815057
refers to: 266553_at
refers to: RTNLB5
t statistic: 4.30874468817688

AT2G29340
type: EnsemblDatabaseReference

AT4G27530
type: EnsemblDatabaseReference

GASA2
type: EnsemblDatabaseReference

AT4G29890
type: EnsemblDatabaseReference

ZFP4
type: EnsemblDatabaseReference

ERF023
type: EnsemblDatabaseReference

AT5G42720 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.88452839105311
p value: 0.0235951365086443
refers to: AT5G42720
refers to: 249214_at
t statistic: 7.7317130556201

265269_at
type: EFO_0005072
part of: A-AFFY-2

ATMPK1
type: EnsemblDatabaseReference

ENODL15 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04716696983018
p value: 0.0154166571532748
refers to: 253480_at
refers to: ENODL15
t statistic: -4.59797760518773

AT2G33630
type: EnsemblDatabaseReference

CFIM-25
type: EnsemblDatabaseReference

AT5G15640
type: EnsemblDatabaseReference

AT3G55890 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.88415176339095
p value: 0.00560986215346575
refers to: AT3G55890
refers to: 251743_at
t statistic: 6.56928258598995

254042_at
type: EFO_0005072
part of: A-AFFY-2

AT1G73020
type: EnsemblDatabaseReference

AT2G01540 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17003822026295
p value: 0.00235376210317525
refers to: 266342_at
refers to: AT2G01540
t statistic: -9.03164744003549

AZF3
type: EnsemblDatabaseReference

251576_at
type: EFO_0005072
part of: A-AFFY-2

AT2G11890
type: EnsemblDatabaseReference

AT3G55890
type: EnsemblDatabaseReference

BIM2
type: EnsemblDatabaseReference

AT2G27500
type: EnsemblDatabaseReference

AT2G38820
type: EnsemblDatabaseReference

(Factor value) GENOTYPE/wild type genotype
type: EFO_0000001
property type: GENOTYPE
property value: wild type genotype

266331_at
type: EFO_0005072
part of: A-AFFY-2

ATMRP5
type: EnsemblDatabaseReference

AT1G01770
type: EnsemblDatabaseReference

250874_at
type: EFO_0005072
part of: A-AFFY-2

AT1G71250
type: EnsemblDatabaseReference

263865_at
type: EFO_0005072
part of: A-AFFY-2

267518_at
type: EFO_0005072
part of: A-AFFY-2

254971_at
type: EFO_0005072
part of: A-AFFY-2

253238_at
type: EFO_0005072
part of: A-AFFY-2

262105_at
type: EFO_0005072
part of: A-AFFY-2

sks4
type: EnsemblDatabaseReference

AT2G22080
type: EnsemblDatabaseReference

DIC2
type: EnsemblDatabaseReference

AT2G41640
type: EnsemblDatabaseReference

ATEXPA1
type: EnsemblDatabaseReference

PETC DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.35157283280152
p value: 0.00713647485579672
refers to: PETC
refers to: 255435_at
t statistic: -5.95927662648504

XERICO DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.90396697775678
p value: 0.00109248354569113
refers to: XERICO
refers to: 263325_at
t statistic: -13.8953748560767

CYP76C7 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06950960778136
p value: 0.0246096505563457
refers to: CYP76C7
refers to: 251350_at
t statistic: -3.94827559816731

AT2G17660
type: EnsemblDatabaseReference

PPD4
type: EnsemblDatabaseReference

AT5G01670
type: EnsemblDatabaseReference

262891_at
type: EFO_0005072
part of: A-AFFY-2

AT2G35310
type: EnsemblDatabaseReference

258252_at
type: EFO_0005072
part of: A-AFFY-2

AT2G30600
type: EnsemblDatabaseReference

H2B
type: EnsemblDatabaseReference

AT3G02800
type: EnsemblDatabaseReference

261745_at
type: EFO_0005072
part of: A-AFFY-2

259439_at
type: EFO_0005072
part of: A-AFFY-2

245161_at
type: EFO_0005072
part of: A-AFFY-2

KCS8 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.65439609085126
p value: 0.00388783044217054
refers to: 265918_at
refers to: KCS8
t statistic: 7.58623600555532

261031_at
type: EFO_0005072
part of: A-AFFY-2

AT1G19130
type: EnsemblDatabaseReference

AT4G39130 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03430777977739
p value: 0.047505850343087
refers to: AT4G39130
refers to: 252914_at
t statistic: -3.19995647802662

AT5G07020 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.31678859065173
p value: 0.00439886804415848
refers to: AT5G07020
refers to: 250668_at
t statistic: -7.21422836084908

RD26
type: EnsemblDatabaseReference

262220_at
type: EFO_0005072
part of: A-AFFY-2

CAO
type: EnsemblDatabaseReference

DYL1
type: EnsemblDatabaseReference

AT1G21680
type: EnsemblDatabaseReference

AOAT2
type: EnsemblDatabaseReference

AT2G04039 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.20140202987976
p value: 0.00629435346319155
refers to: AT2G04039
refers to: 263410_at
t statistic: 6.25937776130526

AtHSD5
type: EnsemblDatabaseReference

261373_at
type: EFO_0005072
part of: A-AFFY-2

ATECI3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.29452612492779
p value: 0.005922858740294
refers to: ATECI3
refers to: 245612_at
t statistic: 6.39715797768308

AT1G17360
type: EnsemblDatabaseReference

AT5G13610 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.02665066471128
p value: 0.00182095596064027
refers to: 250250_at
refers to: AT5G13610
t statistic: 10.3205272589305

KUOX1
type: EnsemblDatabaseReference

AT5G14390
type: EnsemblDatabaseReference

266215_at
type: EFO_0005072
part of: A-AFFY-2

258610_at
type: EFO_0005072
part of: A-AFFY-2

260914_at
type: EFO_0005072
part of: A-AFFY-2

YLS2
type: EnsemblDatabaseReference

256746_at
type: EFO_0005072
part of: A-AFFY-2

253666_at
type: EFO_0005072
part of: A-AFFY-2

AT1G72800
type: EnsemblDatabaseReference

LUL2
type: EnsemblDatabaseReference

ATEM6 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23158984473236
p value: 0.00501586308541988
refers to: ATEM6
refers to: 263385_at
t statistic: -6.87094126153085

AtHSD5 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.50013509374863
p value: 0.00586442719152012
refers to: AtHSD5
refers to: 255007_at
t statistic: -6.42723130563745

253811_at
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262290_at
type: EFO_0005072
part of: A-AFFY-2

AT4G29190
type: EnsemblDatabaseReference

264079_at
type: EFO_0005072
part of: A-AFFY-2

AT2G46260
type: EnsemblDatabaseReference

253394_at
type: EFO_0005072
part of: A-AFFY-2

UGT76F1
type: EnsemblDatabaseReference

AT1G14910
type: EnsemblDatabaseReference

PIMT2
type: EnsemblDatabaseReference

ATCXE13 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15089629841006
p value: 0.0169302109450809
refers to: ATCXE13
refers to: 252316_at
t statistic: 4.46157797628085

PDF1 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.67384141752376
p value: 0.0383042398471156
refers to: PDF1
refers to: 263979_at
t statistic: -6.00620639294049

262875_at
type: EFO_0005072
part of: A-AFFY-2

BGAL1
type: EnsemblDatabaseReference

252250_at
type: EFO_0005072
part of: A-AFFY-2

AT1G27990 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.80422232012002
p value: 0.00226825869834649
refers to: 259578_at
refers to: AT1G27990
t statistic: -9.16243465852316

BETA-TIP
type: EnsemblDatabaseReference

SEN1
type: EnsemblDatabaseReference

XERICO
type: EnsemblDatabaseReference

OLEO4
type: EnsemblDatabaseReference

248912_at
type: EFO_0005072
part of: A-AFFY-2

PRL2
type: EnsemblDatabaseReference

DOF2.1
type: EnsemblDatabaseReference

ATARP9
type: EnsemblDatabaseReference

AT3G03320
type: EnsemblDatabaseReference

NIT3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.45299927170279
p value: 0.00182095596064027
refers to: NIT3
refers to: 252677_at
t statistic: -10.3323545405416

258723_at
type: EFO_0005072
part of: A-AFFY-2

NYC1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06444611245381
p value: 0.0262784381391658
refers to: NYC1
refers to: 254764_at
t statistic: -3.86712668204754

ATSMO2
type: EnsemblDatabaseReference

AOP3
type: EnsemblDatabaseReference

AT3G14880
type: EnsemblDatabaseReference

AT1G48280
type: EnsemblDatabaseReference

AT4G32290
type: EnsemblDatabaseReference

AT3G10200
type: EnsemblDatabaseReference

NTF2B UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.38358846870833
p value: 0.00224350460237104
refers to: NTF2B
refers to: 259593_at
t statistic: 9.19799647836159

259053_at
type: EFO_0005072
part of: A-AFFY-2

AT3G52500
type: EnsemblDatabaseReference

AT4G25580
type: EnsemblDatabaseReference

252019_at
type: EFO_0005072
part of: A-AFFY-2

AT4G22960 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.50239301789734
p value: 0.0121999090337225
refers to: AT4G22960
refers to: 254287_at
t statistic: 4.97337337323515

AT4G22960
type: EnsemblDatabaseReference

E2F3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03065498035714
p value: 0.00569756434287053
refers to: E2F3
refers to: 263955_at
t statistic: 6.53069718364313

PYL6
type: EnsemblDatabaseReference

251174_at
type: EFO_0005072
part of: A-AFFY-2

AT4G01280
type: EnsemblDatabaseReference

ALDH2C4 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -3.03234390972681
p value: 6.21757337851341E-4
refers to: ALDH2C4
refers to: 258140_at
t statistic: -18.7025921583196

AtGolS2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.81703400355728
p value: 0.00619142670689853
refers to: 245627_at
refers to: AtGolS2
t statistic: -6.29321164943545

AT5G45280
type: EnsemblDatabaseReference

AT3G01520
type: EnsemblDatabaseReference

AT1G54860
type: EnsemblDatabaseReference

XTH33
type: EnsemblDatabaseReference

AT1G60060
type: EnsemblDatabaseReference

251761_at
type: EFO_0005072
part of: A-AFFY-2

AT2G03280 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08042398310411
p value: 0.0394244534905629
refers to: AT2G03280
refers to: 266733_at
t statistic: -3.40160514166649

PME25
type: EnsemblDatabaseReference

ASG4
type: EnsemblDatabaseReference

AT1G02816 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04619990711969
p value: 0.00569689658857078
refers to: AT1G02816
refers to: 262116_at
t statistic: -6.53490899679824

ATHB4
type: EnsemblDatabaseReference

AT1G71000
type: EnsemblDatabaseReference

267116_at
type: EFO_0005072
part of: A-AFFY-2

ATGSTU8 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21333346644674
p value: 0.0114883537689305
refers to: ATGSTU8
refers to: 259040_at
t statistic: 5.07492415161426

AT3G25260 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.60962871129449
p value: 0.0248965490888945
refers to: AT3G25260
refers to: 257841_at
t statistic: -3.93427818802253

PROT1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.86526588068784
p value: 6.21757337851341E-4
refers to: PROT1
refers to: 267358_at
t statistic: 18.3055576336059

AT5G20880
type: EnsemblDatabaseReference

RTNLB5
type: EnsemblDatabaseReference

ATHB54
type: EnsemblDatabaseReference

HDT4
type: EnsemblDatabaseReference

AT1G64270 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.31841914005864
p value: 0.0139033065182457
refers to: AT1G64270
refers to: 259796_at
t statistic: -4.7655748605136

APA2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.52943328118808
p value: 0.00444702810750309
refers to: APA2
refers to: 264741_at
t statistic: -7.14614876584815

ENODL8
type: EnsemblDatabaseReference

259409_at
type: EFO_0005072
part of: A-AFFY-2

AT2G28490
type: EnsemblDatabaseReference

anac103
type: EnsemblDatabaseReference

AT2G23240 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.91578851687205
p value: 0.00453211097845786
refers to: AT2G23240
refers to: 245070_at
t statistic: -7.0857620430041

AT5G18850
type: EnsemblDatabaseReference

254440_at
type: EFO_0005072
part of: A-AFFY-2

AT1G70985 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.74759013998071
p value: 0.00851101110576191
refers to: AT1G70985
refers to: 262290_at
t statistic: -5.57813116535161

AT4G16770 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1459278604885
p value: 0.00576598042610745
refers to: AT4G16770
refers to: 245307_at
t statistic: -6.48253560994167

TRFL10
type: EnsemblDatabaseReference

CRF3
type: EnsemblDatabaseReference

267358_at
type: EFO_0005072
part of: A-AFFY-2

AT2G46690
type: EnsemblDatabaseReference

ATTI7
type: EnsemblDatabaseReference

253051_at
type: EFO_0005072
part of: A-AFFY-2

VIT1
type: EnsemblDatabaseReference

PMZ UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.26511148691267
p value: 0.0348661698765129
refers to: 256576_at
refers to: PMZ
t statistic: 3.53423344429518

255527_at
type: EFO_0005072
part of: A-AFFY-2

AT1G72100
type: EnsemblDatabaseReference

SOUL-1
type: EnsemblDatabaseReference

CBSDUF4
type: EnsemblDatabaseReference

AT3G29320 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12536650543132
p value: 0.0447684043495488
refers to: 256746_at
refers to: AT3G29320
t statistic: -3.26552693912324

CBSCBS2
type: EnsemblDatabaseReference

AT2G42560
type: EnsemblDatabaseReference

ALDH2C4
type: EnsemblDatabaseReference

255255_at
type: EFO_0005072
part of: A-AFFY-2

AT4G33960 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.40995038005721
p value: 0.0235951365086443
refers to: AT4G33960
refers to: 253317_at
t statistic: -8.35680748199745

ATGSTU25
type: EnsemblDatabaseReference

256299_at
type: EFO_0005072
part of: A-AFFY-2

TMK1 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.47436450822683
p value: 0.0126205259216177
refers to: TMK1
refers to: 256516_at
t statistic: -11.3423094443389

261828_at
type: EFO_0005072
part of: A-AFFY-2

260367_at
type: EFO_0005072
part of: A-AFFY-2

AT2G38465
type: EnsemblDatabaseReference

GBF2
type: EnsemblDatabaseReference

BHLH149 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.06333117252057
p value: 0.00202515751383811
refers to: BHLH149
refers to: 264264_at
t statistic: -9.73354104765237

PATL2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.05804896349662
p value: 0.0169302109450809
refers to: PATL2
refers to: 261926_at
t statistic: 4.46147433469182

SOM
type: EnsemblDatabaseReference

AT1G11410 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.53541345320029
p value: 7.60827748523182E-4
refers to: 261819_at
refers to: AT1G11410
t statistic: 15.5834676391911

ATACP5 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.17815582193042
p value: 0.0129041387044186
refers to: ATACP5
refers to: 258158_at
t statistic: 4.88531916190087

AT1G31660 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.20324701960097
p value: 0.00153170446383341
refers to: AT1G31660
refers to: 246575_at
t statistic: 11.8159436173312

262745_at
type: EFO_0005072
part of: A-AFFY-2

254453_at
type: EFO_0005072
part of: A-AFFY-2

260412_at
type: EFO_0005072
part of: A-AFFY-2

AT3G12920
type: EnsemblDatabaseReference

256931_at
type: EFO_0005072
part of: A-AFFY-2

AT4G16710
type: EnsemblDatabaseReference

AT5G62710
type: EnsemblDatabaseReference

PSK1 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.66990094873182
p value: 0.0235951365086443
refers to: PSK1
refers to: 252624_at
t statistic: -7.28751612451181

AT3G52070
type: EnsemblDatabaseReference

PYL2
type: EnsemblDatabaseReference

ATPCAP1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13921458521104
p value: 0.0157941923664086
refers to: ATPCAP1
refers to: 254492_at
t statistic: -4.56250818250017

267199_at
type: EFO_0005072
part of: A-AFFY-2

250914_at
type: EFO_0005072
part of: A-AFFY-2

SNG2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06175355433281
p value: 0.00427061373353457
refers to: 250501_at
refers to: SNG2
t statistic: -7.29525620682953

AT1G05840 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08052486516168
p value: 0.013107220482997
refers to: AT1G05840
refers to: 261253_at
t statistic: -4.86247182650387

ATAMI1
type: EnsemblDatabaseReference

264264_at
type: EFO_0005072
part of: A-AFFY-2

RPB5D
type: EnsemblDatabaseReference

AtRABH1c
type: EnsemblDatabaseReference

AT3G52070 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.29622478761644
p value: 0.00201438534069138
refers to: 252036_at
refers to: AT3G52070
t statistic: -9.80182552396235

AT2G39650
type: EnsemblDatabaseReference

253722_at
type: EFO_0005072
part of: A-AFFY-2

ATECP31
type: EnsemblDatabaseReference

ATOPT6 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10361188362312
p value: 0.00222497875680134
refers to: ATOPT6
refers to: 253887_at
t statistic: 9.26341807354701

263118_at
type: EFO_0005072
part of: A-AFFY-2

IDH-VI UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.00774227306006
p value: 0.0318648055348557
refers to: 258655_at
refers to: IDH-VI
t statistic: 3.64996717572151

AT1G47980 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.48525730962119
p value: 0.00800066623255674
refers to: AT1G47980
refers to: 259615_at
t statistic: -5.70038766979158

CYC1 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.19316635781466
p value: 0.0404120051244562
refers to: CYC1
refers to: 253051_at
t statistic: 5.82392409662178

AT4G17840
type: EnsemblDatabaseReference

SESA1
type: EnsemblDatabaseReference

AT3G52470 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.8604768320596
p value: 0.00222497875680134
refers to: 252058_at
refers to: AT3G52470
t statistic: 9.2249486180248

251731_at
type: EFO_0005072
part of: A-AFFY-2

AT2G24550
type: EnsemblDatabaseReference

AT3G16990
type: EnsemblDatabaseReference

AT4G12070
type: EnsemblDatabaseReference

E-GEOD-14374
type: microarray 1colour mrna differential
RO_0002162: Arabidopsis thaliana
description: PIL5 is a key negative regulator of phytochrome mediated seed germination and PIL5 protein is degraded by red light irradiation through phytochrome. The microarray aimed to find various red light-regulated genes and PIL5-regulated genes in the imbibed seeds. Experiment Overall Design: Col-0 and pil5 seeds were irradiated by far-red light or far-red/red light and then, incubated in the dark for 12 hours. Total three biological replicates were used for the microarray.
uses data from: http://identifiers.org/pubmed/19244139

257474_at
type: EFO_0005072
part of: A-AFFY-2

AT2G22230
type: EnsemblDatabaseReference

PEN3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.47239212244126
p value: 0.00277983332710353
refers to: PEN3
refers to: 262899_at
t statistic: -8.54752537968329

SAM1
type: EnsemblDatabaseReference

RTNLB22
type: EnsemblDatabaseReference

ATBRCA1
type: EnsemblDatabaseReference

263875_at
type: EFO_0005072
part of: A-AFFY-2

AT3G55690 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.20200016034094
p value: 0.00201438534069138
refers to: 251749_at
refers to: AT3G55690
t statistic: 9.83998750536614

252204_at
type: EFO_0005072
part of: A-AFFY-2

PKP4
type: EnsemblDatabaseReference

CFIM-25 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.86996220277486
p value: 0.005471884518766
refers to: CFIM-25
refers to: 253672_at
t statistic: -6.60991221066158

256772_at
type: EFO_0005072
part of: A-AFFY-2

GATA17 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13202357691635
p value: 0.00194108865771302
refers to: GATA17
refers to: 257571_at
t statistic: 9.9645613863235

AT1G17430 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.22917458400168
p value: 0.00600024799839822
refers to: AT1G17430
refers to: 261032_at
t statistic: -6.36120440884814

MERI5B
type: EnsemblDatabaseReference

XTR6 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.37001117031937
p value: 0.0233736538829859
refers to: 254042_at
refers to: XTR6
t statistic: 4.02171542360304

ATRMA2
type: EnsemblDatabaseReference

XTR2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45915260638959
p value: 0.0111156787301597
refers to: 262842_at
refers to: XTR2
t statistic: 5.12451559606025

IAA30
type: EnsemblDatabaseReference

GATA19
type: EnsemblDatabaseReference

NTF2B
type: EnsemblDatabaseReference

APL3
type: EnsemblDatabaseReference

259578_at
type: EFO_0005072
part of: A-AFFY-2

AT4G10270
type: EnsemblDatabaseReference

AT1G59660 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.46167059426908
p value: 0.00977888533474193
refers to: AT1G59660
refers to: 262124_at
t statistic: 5.33697093125621

AT4G28240
type: EnsemblDatabaseReference

XERO1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.35195446742053
p value: 0.00364345186296253
refers to: 252137_at
refers to: XERO1
t statistic: -7.79562290687224

AT-HSFC1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21954941162827
p value: 0.00535889625664449
refers to: AT-HSFC1
refers to: 258139_at
t statistic: -6.67123429942868

Analysis of 'pil5-1' vs 'wild type' in 'far-red/red light'
type: MicroarrayDifferentialExpressionAnalysis

PLP
type: EnsemblDatabaseReference

264692_at
type: EFO_0005072
part of: A-AFFY-2

HCAR DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.70115305005563
p value: 0.00280726476728146
refers to: HCAR
refers to: 264597_at
t statistic: -8.52779267948443

XTH33 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.48044356141018
p value: 0.0373349774417539
refers to: XTH33
refers to: 263207_at
t statistic: -6.07331269531457

AT3G09470
type: EnsemblDatabaseReference

261755_at
type: EFO_0005072
part of: A-AFFY-2

248251_at
type: EFO_0005072
part of: A-AFFY-2

PGM2
type: EnsemblDatabaseReference

AT2G25890
type: EnsemblDatabaseReference

SNG2
type: EnsemblDatabaseReference

255941_at
type: EFO_0005072
part of: A-AFFY-2

AT2G37240
type: EnsemblDatabaseReference

A-AFFY-2
type: EFO_0000269

GA4H
type: EnsemblDatabaseReference

ATRBL14 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.76477357737095
p value: 0.0266022205596938
refers to: ATRBL14
refers to: 258406_at
t statistic: 3.85314348810994

IAA16
type: EnsemblDatabaseReference

PLP9
type: EnsemblDatabaseReference

257460_at
type: EFO_0005072
part of: A-AFFY-2

MCCA
type: EnsemblDatabaseReference

AT1G29680
type: EnsemblDatabaseReference

264463_at
type: EFO_0005072
part of: A-AFFY-2

247989_at
type: EFO_0005072
part of: A-AFFY-2

AT4G05070
type: EnsemblDatabaseReference

AT1G55760 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2994879286293
p value: 0.0261448779521028
refers to: AT1G55760
refers to: 264562_at
t statistic: 3.87408118026495

AT1G15740
type: EnsemblDatabaseReference

SSI2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15015824766345
p value: 0.0119610026749629
refers to: 260570_at
refers to: SSI2
t statistic: -5.0129644718189

PTP1
type: EnsemblDatabaseReference

AT4G32290 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.28834226663086
p value: 0.0214043149452164
refers to: 253475_at
refers to: AT4G32290
t statistic: -4.13972077704901

ILR1
type: EnsemblDatabaseReference

ILR1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23213245930066
p value: 0.00629435346319155
refers to: ILR1
refers to: 258610_at
t statistic: -6.25504030719525

CID2
type: EnsemblDatabaseReference

GATA17
type: EnsemblDatabaseReference

LUL2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23297887332632
p value: 0.00221490301388011
refers to: LUL2
refers to: 251959_at
t statistic: -9.38951362919907

AT4G29890
type: EnsemblDatabaseReference

AT2G29340
type: EnsemblDatabaseReference

ZFP4
type: EnsemblDatabaseReference

ERF023
type: EnsemblDatabaseReference

DREB19
type: EnsemblDatabaseReference

SAM1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.07175823921703
p value: 0.00660511809677845
refers to: 260913_at
refers to: SAM1
t statistic: -6.117374893368

AT2G33630
type: EnsemblDatabaseReference

GA4H DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13039053187727
p value: 0.0385385477125486
refers to: GA4H
refers to: 260300_at
t statistic: -5.98072084762147

251071_at
type: EFO_0005072
part of: A-AFFY-2

ALDH5F1
type: EnsemblDatabaseReference

AT5G15640
type: EnsemblDatabaseReference

AT3G43720
type: EnsemblDatabaseReference

AT5G07020
type: EnsemblDatabaseReference

AT1G67920 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.43287849320491
p value: 0.0112810577265479
refers to: 260005_at
refers to: AT1G67920
t statistic: -5.10103563197218

246299_at
type: EFO_0005072
part of: A-AFFY-2

AT2G38905 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.73562429844361
p value: 0.0059223697005436
refers to: AT2G38905
refers to: 266143_at
t statistic: -6.401715011902

AT1G73020
type: EnsemblDatabaseReference

AZF3
type: EnsemblDatabaseReference

ALDH12A1
type: EnsemblDatabaseReference

260010_at
type: EFO_0005072
part of: A-AFFY-2

264821_at
type: EFO_0005072
part of: A-AFFY-2

AT4G03200
type: EnsemblDatabaseReference

AT2G11890
type: EnsemblDatabaseReference

XERO1
type: EnsemblDatabaseReference

DWF5
type: EnsemblDatabaseReference

AT3G01520 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.25442688535247
p value: 0.0192683332869296
refers to: AT3G01520
refers to: 259184_at
t statistic: -4.27805603103981

PAR1
type: EnsemblDatabaseReference

AT1G48430
type: EnsemblDatabaseReference

AT3G55890
type: EnsemblDatabaseReference

BIM2
type: EnsemblDatabaseReference

AT2G23240
type: EnsemblDatabaseReference

262071_at
type: EFO_0005072
part of: A-AFFY-2

ATMRP5
type: EnsemblDatabaseReference

EXGT-A1 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.76655356386607
p value: 0.0235951365086443
refers to: EXGT-A1
refers to: 266215_at
t statistic: -7.8175536972379

AT3G11780 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.57848947639064
p value: 0.0208839845400021
refers to: 258788_at
refers to: AT3G11780
t statistic: 4.17334481112055

AT1G01770
type: EnsemblDatabaseReference

sks5 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.398498826234
p value: 0.00333683966931525
refers to: sks5
refers to: 261728_at
t statistic: 8.01754578777056

AT1G71250
type: EnsemblDatabaseReference

LNG2 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02079990287143
p value: 0.0479459736152749
refers to: 259104_at
refers to: LNG2
t statistic: -5.3169120748473

ATLCAT3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.26602837597567
p value: 0.00227765903724682
refers to: ATLCAT3
refers to: 259057_at
t statistic: -9.1332577540997

255825_at
type: EFO_0005072
part of: A-AFFY-2

253791_at
type: EFO_0005072
part of: A-AFFY-2

262828_at
type: EFO_0005072
part of: A-AFFY-2

sks4
type: EnsemblDatabaseReference

AT2G22080
type: EnsemblDatabaseReference

259235_at
type: EFO_0005072
part of: A-AFFY-2

FMO GS-OX4
type: EnsemblDatabaseReference

UGT76C4 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3795290373279
p value: 0.00679216306864706
refers to: 250746_at
refers to: UGT76C4
t statistic: -6.04233277921366

256300_at
type: EFO_0005072
part of: A-AFFY-2

AtPPa2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13292244852619
p value: 0.04432370418899
refers to: AtPPa2
refers to: 265339_at
t statistic: 3.27690407700717

AT2G19385
type: EnsemblDatabaseReference

ATEXPA1
type: EnsemblDatabaseReference

AT3G02800 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.00586266937505
p value: 0.00182095596064027
refers to: AT3G02800
refers to: 257536_at
t statistic: 10.2649208951507

PPD4
type: EnsemblDatabaseReference

263745_at
type: EFO_0005072
part of: A-AFFY-2

PSK1
type: EnsemblDatabaseReference

AT2G35310
type: EnsemblDatabaseReference

262284_at
type: EFO_0005072
part of: A-AFFY-2

AT1G07040 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5937126387143
p value: 0.00157400087891326
refers to: 256061_at
refers to: AT1G07040
t statistic: -11.2839437434966

AT3G57020
type: EnsemblDatabaseReference

ATSKP2;2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.61068246757485
p value: 0.00173961140697183
refers to: 264957_at
refers to: ATSKP2;2
t statistic: -10.6810102430507

AT3G02800
type: EnsemblDatabaseReference

266553_at
type: EFO_0005072
part of: A-AFFY-2

260565_at
type: EFO_0005072
part of: A-AFFY-2

AT1G19130
type: EnsemblDatabaseReference

Hop1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21425999229265
p value: 0.00940813648528646
refers to: 259519_at
refers to: Hop1
t statistic: 5.41635488040461

AT3G10930 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.88597843793619
p value: 0.0051496373673126
refers to: 256442_at
refers to: AT3G10930
t statistic: 6.78516393735094

267026_at
type: EFO_0005072
part of: A-AFFY-2

256513_at
type: EFO_0005072
part of: A-AFFY-2

RD26
type: EnsemblDatabaseReference

ATEXPA1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45229515976607
p value: 0.00157400087891326
refers to: ATEXPA1
refers to: 256299_at
t statistic: 11.1437566437725

266895_at
type: EFO_0005072
part of: A-AFFY-2

251100_at
type: EFO_0005072
part of: A-AFFY-2

CAO
type: EnsemblDatabaseReference

261482_at
type: EFO_0005072
part of: A-AFFY-2

AOAT2
type: EnsemblDatabaseReference

AT3G03270 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4645713964775
p value: 0.0153529288675312
refers to: AT3G03270
refers to: 258879_at
t statistic: 9.94957147219404

AT1G17360
type: EnsemblDatabaseReference

AtHSD5
type: EnsemblDatabaseReference

AT1G16510 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.09361913223439
p value: 0.0147151090996709
refers to: AT1G16510
refers to: 262703_at
t statistic: -4.67145407480248

KUOX1
type: EnsemblDatabaseReference

257285_at
type: EFO_0005072
part of: A-AFFY-2

EEL
type: EnsemblDatabaseReference

CALS1 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01618023304613
p value: 0.0398265110652744
refers to: CALS1
refers to: 263183_at
t statistic: -5.91834479469204

ARF18
type: EnsemblDatabaseReference

AT5G11460
type: EnsemblDatabaseReference

245483_at
type: EFO_0005072
part of: A-AFFY-2

RD26 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04449435526436
p value: 0.0108550447532565
refers to: 253872_at
refers to: RD26
t statistic: -5.17114856231589

245626_at
type: EFO_0005072
part of: A-AFFY-2

AT1G05710
type: EnsemblDatabaseReference

LUL2
type: EnsemblDatabaseReference

AT3G55770
type: EnsemblDatabaseReference

263829_at
type: EFO_0005072
part of: A-AFFY-2

AT-HSFC1
type: EnsemblDatabaseReference

AT4G29190
type: EnsemblDatabaseReference

SPPL4
type: EnsemblDatabaseReference

AT-GTL1
type: EnsemblDatabaseReference

260207_at
type: EFO_0005072
part of: A-AFFY-2

261253_at
type: EFO_0005072
part of: A-AFFY-2

AT2G46260
type: EnsemblDatabaseReference

BOR1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.00918424793098
p value: 0.0241450762692334
refers to: BOR1
refers to: 263319_at
t statistic: -3.97456299818025

UGT76F1
type: EnsemblDatabaseReference

AT1G14910
type: EnsemblDatabaseReference

264304_at
type: EFO_0005072
part of: A-AFFY-2

MSD2
type: EnsemblDatabaseReference

BGAL1
type: EnsemblDatabaseReference

AT1G28600 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.83016671920485
p value: 6.21757337851341E-4
refers to: AT1G28600
refers to: 262745_at
t statistic: 16.887520953078

SEN1
type: EnsemblDatabaseReference

ALPHA-VPE UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.54895953346114
p value: 0.0226493220655491
refers to: 266849_at
refers to: ALPHA-VPE
t statistic: 4.0644856944827

ECA2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13590842331104
p value: 0.0231246655298137
refers to: ECA2
refers to: 255647_at
t statistic: 4.03384306518054

OLEO4
type: EnsemblDatabaseReference

259976_at
type: EFO_0005072
part of: A-AFFY-2

BGLU44 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.31011542066252
p value: 0.0107992859294691
refers to: 258151_at
refers to: BGLU44
t statistic: -5.17904206762774

262170_at
type: EFO_0005072
part of: A-AFFY-2

AT1G70985
type: EnsemblDatabaseReference

ATARP9
type: EnsemblDatabaseReference

PDLP2
type: EnsemblDatabaseReference

AT2G32560 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.54406525995994
p value: 0.00777217008464877
refers to: AT2G32560
refers to: 267116_at
t statistic: 5.76533266376535

BGLU28
type: EnsemblDatabaseReference

263799_at
type: EFO_0005072
part of: A-AFFY-2

ATSMO2
type: EnsemblDatabaseReference

AOP3
type: EnsemblDatabaseReference

GATA19 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03774546646291
p value: 0.00966314059770184
refers to: GATA19
refers to: 246274_at
t statistic: 5.35813724293338

AT1G48280
type: EnsemblDatabaseReference

ATBCAT-2
type: EnsemblDatabaseReference

AT4G32290
type: EnsemblDatabaseReference

265119_at
type: EFO_0005072
part of: A-AFFY-2

AT3G55720 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.47271319370948
p value: 0.00642568126169306
refers to: 251751_at
refers to: AT3G55720
t statistic: 6.21695035543809

256225_at
type: EFO_0005072
part of: A-AFFY-2

253317_at
type: EFO_0005072
part of: A-AFFY-2

AT1G03610 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.96327750064325
p value: 0.00289282434021766
refers to: 264836_at
refers to: AT1G03610
t statistic: -8.39153876299578

UGT84A2
type: EnsemblDatabaseReference

PMZ
type: EnsemblDatabaseReference

AT4G01280
type: EnsemblDatabaseReference

AT3G57450
type: EnsemblDatabaseReference

PYL6
type: EnsemblDatabaseReference

266752_at
type: EFO_0005072
part of: A-AFFY-2

AT4G19420 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.22735136286448
p value: 0.0183286343189295
refers to: AT4G19420
refers to: 254573_at
t statistic: 4.35298713208919

AT1G19530 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.39677869783618
p value: 0.0346746852604836
refers to: AT1G19530
refers to: 260668_at
t statistic: 6.23305570326661

258460_at
type: EFO_0005072
part of: A-AFFY-2

AT5G47020
type: EnsemblDatabaseReference

255380_at
type: EFO_0005072
part of: A-AFFY-2

256125_at
type: EFO_0005072
part of: A-AFFY-2

AT3G01520
type: EnsemblDatabaseReference

AT1G54860
type: EnsemblDatabaseReference

253904_at
type: EFO_0005072
part of: A-AFFY-2

AT5G45280
type: EnsemblDatabaseReference

245612_at
type: EFO_0005072
part of: A-AFFY-2

262383_at
type: EFO_0005072
part of: A-AFFY-2

AT2G35310 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.36507796593151
p value: 0.00872428042574691
refers to: AT2G35310
refers to: 266540_at
t statistic: -5.53696269240581

LNG2
type: EnsemblDatabaseReference

ATACP5
type: EnsemblDatabaseReference

AT2G29670 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.02267916143546
p value: 0.00416066047245431
refers to: AT2G29670
refers to: 266617_at
t statistic: 7.36833891671268

ATHB4
type: EnsemblDatabaseReference

ATCXE13
type: EnsemblDatabaseReference

AT1G19530
type: EnsemblDatabaseReference

RTNLB5
type: EnsemblDatabaseReference

AT3G55770 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03128819356045
p value: 0.0235756907268798
refers to: 251758_at
refers to: AT3G55770
t statistic: -4.0097919369108

ATUPS5
type: EnsemblDatabaseReference

257484_at
type: EFO_0005072
part of: A-AFFY-2

GRXS13
type: EnsemblDatabaseReference

AT2G28490
type: EnsemblDatabaseReference

AT5G23460 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02155204379785
p value: 0.0346512300692882
refers to: AT5G23460
refers to: 249838_at
t statistic: -3.54183341627479

266278_at
type: EFO_0005072
part of: A-AFFY-2

anac103
type: EnsemblDatabaseReference

AT5G18850
type: EnsemblDatabaseReference

256338_at
type: EFO_0005072
part of: A-AFFY-2

AT3G11930 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.29517608944266
p value: 0.00277983332710353
refers to: 258727_at
refers to: AT3G11930
t statistic: -8.54623525936763

AT5G47440 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.37797965450815
p value: 0.0129818265438218
refers to: AT5G47440
refers to: 248789_at
t statistic: 4.87495348102489

255049_at
type: EFO_0005072
part of: A-AFFY-2

254447_at
type: EFO_0005072
part of: A-AFFY-2

255493_at
type: EFO_0005072
part of: A-AFFY-2

AT3G03270
type: EnsemblDatabaseReference

AT2G46690
type: EnsemblDatabaseReference

253158_at
type: EFO_0005072
part of: A-AFFY-2

258716_at
type: EFO_0005072
part of: A-AFFY-2

264974_at
type: EFO_0005072
part of: A-AFFY-2

246597_at
type: EFO_0005072
part of: A-AFFY-2

VIT1
type: EnsemblDatabaseReference

ATFP3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0743919550776
p value: 0.00775227308742974
refers to: ATFP3
refers to: 247331_at
t statistic: -5.77613767518478

AT3G05260 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.27895168887898
p value: 7.60827748523182E-4
refers to: 259314_at
refers to: AT3G05260
t statistic: -15.2887359758162

AO
type: EnsemblDatabaseReference

AT4G25330 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21439305824447
p value: 0.0312806699843464
refers to: AT4G25330
refers to: 254055_at
t statistic: 3.66750792694387

CBSDUF4
type: EnsemblDatabaseReference

AT4G39900 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.05514193939409
p value: 0.0199715147548888
refers to: AT4G39900
refers to: 252852_at
t statistic: -4.22729935838314

254934_at
type: EFO_0005072
part of: A-AFFY-2

PDLP3
type: EnsemblDatabaseReference

ATGSTU25
type: EnsemblDatabaseReference

LBD18 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.05344342771173
p value: 0.0134445019460039
refers to: 245140_at
refers to: LBD18
t statistic: 4.81881951207499

252898_at
type: EFO_0005072
part of: A-AFFY-2

CXE8 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.28914484844237
p value: 0.0307764365688889
refers to: 267503_at
refers to: CXE8
t statistic: -3.68465871132877

PG2
type: EnsemblDatabaseReference

264745_at
type: EFO_0005072
part of: A-AFFY-2

253373_at
type: EFO_0005072
part of: A-AFFY-2

SOM
type: EnsemblDatabaseReference

AT5G01950
type: EnsemblDatabaseReference

ATHB-2
type: EnsemblDatabaseReference

LEA14
type: EnsemblDatabaseReference

252914_at
type: EFO_0005072
part of: A-AFFY-2

AT3G19990
type: EnsemblDatabaseReference

AT5G18210
type: EnsemblDatabaseReference

CIL UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.64185878810601
p value: 0.00173961140697183
refers to: CIL
refers to: 254043_at
t statistic: 10.6268729387731

255577_at
type: EFO_0005072
part of: A-AFFY-2

256324_at
type: EFO_0005072
part of: A-AFFY-2

AT3G12960
type: EnsemblDatabaseReference

AT2G30500 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.50885158415947
p value: 0.0120622766154051
refers to: AT2G30500
refers to: 267518_at
t statistic: -4.99807203744115

AT4G16710
type: EnsemblDatabaseReference

AT5G62710
type: EnsemblDatabaseReference

245809_at
type: EFO_0005072
part of: A-AFFY-2

AT3G03320 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.34897437238139
p value: 0.0113092335976119
refers to: AT3G03320
refers to: 259053_at
t statistic: -5.09780634495707

RABC2b DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.31441561823191
p value: 0.00926522844788362
refers to: RABC2b
refers to: 258652_at
t statistic: -5.4406194902238

266849_at
type: EFO_0005072
part of: A-AFFY-2

M17 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.28487133886126
p value: 0.00314812365583793
refers to: 266393_at
refers to: M17
t statistic: -8.13915754321062

RPB5D
type: EnsemblDatabaseReference

AtRABH1c
type: EnsemblDatabaseReference

AT3G04890
type: EnsemblDatabaseReference

ATECP31
type: EnsemblDatabaseReference

AT2G03420
type: EnsemblDatabaseReference

CYP76C7
type: EnsemblDatabaseReference

ATLP-1
type: EnsemblDatabaseReference

259474_at
type: EFO_0005072
part of: A-AFFY-2

AT1G31750 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.66154027079119
p value: 0.00526294050922077
refers to: AT1G31750
refers to: 246582_at
t statistic: -6.74269162669513

CBSX5 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.50473266684408
p value: 0.00380427402367313
refers to: CBSX5
refers to: 253864_at
t statistic: -7.6460301640035

WR3
type: EnsemblDatabaseReference

SESA1
type: EnsemblDatabaseReference

ATMPK2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11002867143667
p value: 0.0217625822023463
refers to: ATMPK2
refers to: 262076_at
t statistic: -4.11934746938799

246626_at
type: EFO_0005072
part of: A-AFFY-2

BXL2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.11480408011969
p value: 0.0196830553829359
refers to: BXL2
refers to: 260914_at
t statistic: 4.25000200039049

PHYA DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0968382274784
p value: 0.00254900695187436
refers to: 264508_at
refers to: PHYA
t statistic: -8.84290338697778

HIS1-3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.15554383461816
p value: 0.00651552297673325
refers to: HIS1-3
refers to: 265817_at
t statistic: -6.17981902612045

CBSCBS2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10637037805443
p value: 0.0314434575775377
refers to: CBSCBS2
refers to: 260413_at
t statistic: -3.66222144425118

ATRMA2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.46626639319459
p value: 0.0135498108952814
refers to: 253806_at
refers to: ATRMA2
t statistic: -4.80606056049589

AT3G21380
type: EnsemblDatabaseReference

252168_at
type: EFO_0005072
part of: A-AFFY-2

AML2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3904570548524
p value: 0.00447392936667178
refers to: AML2
refers to: 265266_at
t statistic: -7.12463880238001

AT2G22230
type: EnsemblDatabaseReference

SAM1
type: EnsemblDatabaseReference

ATHB4 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.01983331166383
p value: 0.00109248354569113
refers to: ATHB4
refers to: 266814_at
t statistic: -13.1452725511559

ATBRCA1
type: EnsemblDatabaseReference

AT1G21680 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.70169278100977
p value: 0.00314812365583793
refers to: AT1G21680
refers to: 262505_at
t statistic: -8.13844801553403

AT1G68670 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.80584388650397
p value: 0.00209888800520278
refers to: 262284_at
refers to: AT1G68670
t statistic: -9.58331047210371

252068_at
type: EFO_0005072
part of: A-AFFY-2

265918_at
type: EFO_0005072
part of: A-AFFY-2

262838_at
type: EFO_0005072
part of: A-AFFY-2

CYP72C1
type: EnsemblDatabaseReference

ERL2
type: EnsemblDatabaseReference

262124_at
type: EFO_0005072
part of: A-AFFY-2

AIL1
type: EnsemblDatabaseReference

AT2G44310 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1341579901653
p value: 0.00325825314249933
refers to: AT2G44310
refers to: 267366_at
t statistic: -8.07251404169025

NTF2B
type: EnsemblDatabaseReference

J8
type: EnsemblDatabaseReference

DJ1B DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0188619237074
p value: 0.0110066765338846
refers to: DJ1B
refers to: 260616_at
t statistic: -5.14785819004122

AT5G18210 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16079105484132
p value: 0.0065207692916501
refers to: AT5G18210
refers to: 250022_at
t statistic: -6.15587115098117

253228_at
type: EFO_0005072
part of: A-AFFY-2

AT1G21780 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06398572750962
p value: 0.00614869450789288
refers to: 262495_at
refers to: AT1G21780
t statistic: -6.30573706493087

253672_at
type: EFO_0005072
part of: A-AFFY-2

AT4G10270
type: EnsemblDatabaseReference

(Sample) genotype/wild type genotype
type: EFO_0000001
property type: genotype
property value: wild type genotype

AT4G28240
type: EnsemblDatabaseReference

PDLP2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.62386554442685
p value: 0.00309112961421393
refers to: PDLP2
refers to: 263677_at
t statistic: 8.2299238723656

PAP85 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.05694772227663
p value: 0.0104453522026844
refers to: PAP85
refers to: 258327_at
t statistic: -5.23275556135159

NAM
type: EnsemblDatabaseReference

AT1G30200 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14687206616873
p value: 0.00468606037866483
refers to: 256193_at
refers to: AT1G30200
t statistic: -7.01157619576505

CHR34 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.58431292110426
p value: 0.00744808574074605
refers to: CHR34
refers to: 263745_at
t statistic: 5.86633307240567

BGAL3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.42303046512141
p value: 0.00815451599954852
refers to: BGAL3
refers to: 253090_at
t statistic: -5.65702137677864

AT3G09470
type: EnsemblDatabaseReference

PGM2
type: EnsemblDatabaseReference

SNG2
type: EnsemblDatabaseReference

251679_at
type: EFO_0005072
part of: A-AFFY-2

AT2G36630
type: EnsemblDatabaseReference

AT2G37240
type: EnsemblDatabaseReference

GA4H
type: EnsemblDatabaseReference

255948_at
type: EFO_0005072
part of: A-AFFY-2

267036_at
type: EFO_0005072
part of: A-AFFY-2

261050_at
type: EFO_0005072
part of: A-AFFY-2

256523_at
type: EFO_0005072
part of: A-AFFY-2

IAA16
type: EnsemblDatabaseReference

PDLP3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.36327781476006
p value: 0.00483701962476198
refers to: PDLP3
refers to: 255817_at
t statistic: 6.93888263433485

ATMPK1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12652386437397
p value: 0.00651552297673325
refers to: 264405_at
refers to: ATMPK1
t statistic: -6.18609070645837

MCCA
type: EnsemblDatabaseReference

267623_at
type: EFO_0005072
part of: A-AFFY-2

AT4G05070
type: EnsemblDatabaseReference

AT1G15740
type: EnsemblDatabaseReference

SOUL-1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.20779420444487
p value: 0.00206387023957797
refers to: SOUL-1
refers to: 266097_at
t statistic: -9.6331445049446

ABF4
type: EnsemblDatabaseReference

254387_at
type: EFO_0005072
part of: A-AFFY-2

264001_at
type: EFO_0005072
part of: A-AFFY-2

AT3G52470
type: EnsemblDatabaseReference

AT1G22850 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17443136742792
p value: 0.00722491257204747
refers to: AT1G22850
refers to: 264728_at
t statistic: -5.91950357787862

267523_at
type: EFO_0005072
part of: A-AFFY-2

246238_at
type: EFO_0005072
part of: A-AFFY-2

AT4G03200 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.31110746793306
p value: 0.00222497875680134
refers to: AT4G03200
refers to: 255418_at
t statistic: -9.27285263356793

AT3G07800 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.39256061496956
p value: 0.0232966647834159
refers to: AT3G07800
refers to: 259224_at
t statistic: 4.02630611226152

ILR1
type: EnsemblDatabaseReference

254974_at
type: EFO_0005072
part of: A-AFFY-2

GATA17
type: EnsemblDatabaseReference

ACS2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.27112462172131
p value: 0.00577297310376556
refers to: 259439_at
refers to: ACS2
t statistic: -6.47113388029004

AT4G02690
type: EnsemblDatabaseReference

ABCB15 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09599515665742
p value: 0.0139472106444549
refers to: 257899_at
refers to: ABCB15
t statistic: 4.75452214902562

HAI3
type: EnsemblDatabaseReference

AT1G66180
type: EnsemblDatabaseReference

DREB19
type: EnsemblDatabaseReference

AT1G66890 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08410684184314
p value: 0.00153170446383341
refers to: AT1G66890
refers to: 245761_at
t statistic: -11.8562722428824

ALDH5F1
type: EnsemblDatabaseReference

252367_at
type: EFO_0005072
part of: A-AFFY-2

AT1G56220 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.455632213883
p value: 0.0226493220655491
refers to: AT1G56220
refers to: 256225_at
t statistic: -4.06464379459555

AT3G43720
type: EnsemblDatabaseReference

AT5G07020
type: EnsemblDatabaseReference

UGP2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16553638499684
p value: 0.0125845486151168
refers to: UGP2
refers to: 250074_at
t statistic: -4.93341375166165

259544_at
type: EFO_0005072
part of: A-AFFY-2

AT1G12230
type: EnsemblDatabaseReference

AT1G06760 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.336736210679
p value: 0.00361461587325981
refers to: AT1G06760
refers to: 260830_at
t statistic: -7.8385193249947

ALDH12A1
type: EnsemblDatabaseReference

XERO1
type: EnsemblDatabaseReference

DWF5
type: EnsemblDatabaseReference

253701_at
type: EFO_0005072
part of: A-AFFY-2

AT4G03200
type: EnsemblDatabaseReference

PAR1
type: EnsemblDatabaseReference

AT1G48430
type: EnsemblDatabaseReference

AT4G31830
type: EnsemblDatabaseReference

ATNUDT13
type: EnsemblDatabaseReference

AT2G23240
type: EnsemblDatabaseReference

DREB2D DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.07722856895836
p value: 0.00367163616847762
refers to: DREB2D
refers to: 262977_at
t statistic: -7.7717341600151

260287_at
type: EFO_0005072
part of: A-AFFY-2

AT3G52500 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.19475293855349
p value: 0.00173961140697183
refers to: AT3G52500
refers to: 252048_at
t statistic: -10.7696237049495

AT1G21780
type: EnsemblDatabaseReference

PDF1
type: EnsemblDatabaseReference

CYP81F2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.62549325668509
p value: 0.00173961140697183
refers to: CYP81F2
refers to: 247949_at
t statistic: 10.744555681076

255905_at
type: EFO_0005072
part of: A-AFFY-2

PG2 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.25496883910749
p value: 0.0436654717447392
refers to: PG2
refers to: 264315_at
t statistic: -5.44843663158103

ATUTR3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03913475182519
p value: 0.00469195810914584
refers to: 261485_at
refers to: ATUTR3
t statistic: 7.00617367203776

FMO GS-OX4
type: EnsemblDatabaseReference

ATMRP5 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17323338904531
p value: 0.0319781519339324
refers to: ATMRP5
refers to: 264330_at
t statistic: -3.64356577439301

252040_at
type: EFO_0005072
part of: A-AFFY-2

258026_at
type: EFO_0005072
part of: A-AFFY-2

AT1G10740
type: EnsemblDatabaseReference

AT2G19385
type: EnsemblDatabaseReference

RPA70C
type: EnsemblDatabaseReference

IAA11
type: EnsemblDatabaseReference

AHP2
type: EnsemblDatabaseReference

266905_at
type: EFO_0005072
part of: A-AFFY-2

260917_at
type: EFO_0005072
part of: A-AFFY-2

PSK1
type: EnsemblDatabaseReference

HPR DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.55999915618262
p value: 0.00844104965740538
refers to: HPR
refers to: 260014_at
t statistic: -5.59173007354675

263138_at
type: EFO_0005072
part of: A-AFFY-2

260058_at
type: EFO_0005072
part of: A-AFFY-2

AT3G57020
type: EnsemblDatabaseReference

EXO
type: EnsemblDatabaseReference

ATEXPA3
type: EnsemblDatabaseReference

251751_at
type: EFO_0005072
part of: A-AFFY-2

257052_at
type: EFO_0005072
part of: A-AFFY-2

AT1G49500
type: EnsemblDatabaseReference

265958_at
type: EFO_0005072
part of: A-AFFY-2

AT3G50340
type: EnsemblDatabaseReference

257809_at
type: EFO_0005072
part of: A-AFFY-2

AT1G03470 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.30764241162091
p value: 0.00364345186296253
refers to: 264821_at
refers to: AT1G03470
t statistic: -7.79832764013747

AT1G70000
type: EnsemblDatabaseReference

248915_at
type: EFO_0005072
part of: A-AFFY-2

262307_at
type: EFO_0005072
part of: A-AFFY-2

ECT6
type: EnsemblDatabaseReference

KCS16 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2576013823255
p value: 0.00575477050577496
refers to: KCS16
refers to: 253285_at
t statistic: 6.4909768103522

267477_at
type: EFO_0005072
part of: A-AFFY-2

GCL2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.20357613711819
p value: 0.00226825869834649
refers to: GCL2
refers to: 265425_at
t statistic: -9.16834198172987

258139_at
type: EFO_0005072
part of: A-AFFY-2

EEL
type: EnsemblDatabaseReference

PME7
type: EnsemblDatabaseReference

PARP3
type: EnsemblDatabaseReference

ARF18
type: EnsemblDatabaseReference

AT5G11460
type: EnsemblDatabaseReference

DJ1B
type: EnsemblDatabaseReference

AT2G42750
type: EnsemblDatabaseReference

AT1G05710
type: EnsemblDatabaseReference

AT3G55770
type: EnsemblDatabaseReference

AT5G56350
type: EnsemblDatabaseReference

COX1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02766184303561
p value: 0.0398027499552275
refers to: COX1
refers to: 257333_at
t statistic: -3.38951879469287

252711_at
type: EFO_0005072
part of: A-AFFY-2

ATTSPO DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.30387460221944
p value: 0.00313068666648258
refers to: ATTSPO
refers to: 266462_at
t statistic: -8.16861163337596

GCL2
type: EnsemblDatabaseReference

AT4G16190 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45456497134339
p value: 0.00783677411346277
refers to: AT4G16190
refers to: 245483_at
t statistic: 5.7375698237021

AT3G60780 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.28809714132908
p value: 0.0332273640711905
refers to: 251339_at
refers to: AT3G60780
t statistic: 3.59352323471011

SPPL4
type: EnsemblDatabaseReference

AT-GTL1
type: EnsemblDatabaseReference

CRK2
type: EnsemblDatabaseReference

UGT84A2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14751456872192
p value: 0.00502068131948835
refers to: 258167_at
refers to: UGT84A2
t statistic: 6.86781570213893

PEN3
type: EnsemblDatabaseReference

HLS1
type: EnsemblDatabaseReference

AT3G51440
type: EnsemblDatabaseReference

AT1G18480 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.45280060755357
p value: 0.0136015862282943
refers to: AT1G18480
refers to: 261676_at
t statistic: 4.80058233041762

MSD2
type: EnsemblDatabaseReference

AT1G14950
type: EnsemblDatabaseReference

AT5G45310
type: EnsemblDatabaseReference

THA2
type: EnsemblDatabaseReference

251150_at
type: EFO_0005072
part of: A-AFFY-2

264313_at
type: EFO_0005072
part of: A-AFFY-2

256021_at
type: EFO_0005072
part of: A-AFFY-2

RSW10
type: EnsemblDatabaseReference

AT1G30860
type: EnsemblDatabaseReference

245334_at
type: EFO_0005072
part of: A-AFFY-2

J8 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3303115867584
p value: 0.00416066047245431
refers to: 261901_at
refers to: J8
t statistic: -7.35403756717394

AtSIP1
type: EnsemblDatabaseReference

AT1G70985
type: EnsemblDatabaseReference

RTNLB13
type: EnsemblDatabaseReference

APL3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13576804518579
p value: 0.0319688365692667
refers to: APL3
refers to: 252888_at
t statistic: 3.64493319138027

PDLP2
type: EnsemblDatabaseReference

ATL57
type: EnsemblDatabaseReference

AT1G74940 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.50068530877533
p value: 6.21757337851341E-4
refers to: AT1G74940
refers to: 262170_at
t statistic: 17.2109990447973

AT3G50340 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.70800285047161
p value: 0.00222497875680134
refers to: AT3G50340
refers to: 252204_at
t statistic: 9.24339586806938

BGLU28
type: EnsemblDatabaseReference

AGD2
type: EnsemblDatabaseReference

CRF3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.1771572414419
p value: 8.26528597329771E-4
refers to: CRF3
refers to: 248253_at
t statistic: 14.7686149991649

266274_at
type: EFO_0005072
part of: A-AFFY-2

255761_at
type: EFO_0005072
part of: A-AFFY-2

ATPGP1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.37419021658956
p value: 0.00725104098352211
refers to: ATPGP1
refers to: 263865_at
t statistic: 5.91186787573696

ATBCAT-2
type: EnsemblDatabaseReference

265672_at
type: EFO_0005072
part of: A-AFFY-2

AT2G16460 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04586589021978
p value: 0.00794432134947507
refers to: AT2G16460
refers to: 263555_at
t statistic: 5.71411073377151

AT5G11460 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.11751896142773
p value: 0.0346746852604836
refers to: 250372_at
refers to: AT5G11460
t statistic: 6.19663168636452

CRA1
type: EnsemblDatabaseReference

255904_at
type: EFO_0005072
part of: A-AFFY-2

253870_at
type: EFO_0005072
part of: A-AFFY-2

265128_at
type: EFO_0005072
part of: A-AFFY-2

259169_at
type: EFO_0005072
part of: A-AFFY-2

PMZ
type: EnsemblDatabaseReference

ACD32.1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.27103619604245
p value: 0.00620124272942638
refers to: ACD32.1
refers to: 262629_at
t statistic: -6.28845412883596

UGT84A2
type: EnsemblDatabaseReference

254443_at
type: EFO_0005072
part of: A-AFFY-2

THH1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.28135195081217
p value: 0.00666766968907253
refers to: THH1
refers to: 261482_at
t statistic: -6.08957525995017

259142_at
type: EFO_0005072
part of: A-AFFY-2

AT3G57450
type: EnsemblDatabaseReference

250074_at
type: EFO_0005072
part of: A-AFFY-2

AT5G47020
type: EnsemblDatabaseReference

AT3G57020 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.13005685927289
p value: 0.00309627933989845
refers to: AT3G57020
refers to: 251658_at
t statistic: -8.19658687368174

LNG2
type: EnsemblDatabaseReference

253054_at
type: EFO_0005072
part of: A-AFFY-2

ATACP5
type: EnsemblDatabaseReference

SKP2A DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.64893735910327
p value: 0.00202515751383811
refers to: SKP2A
refers to: 260875_at
t statistic: -9.76082614883309

248969_at
type: EFO_0005072
part of: A-AFFY-2

262977_at
type: EFO_0005072
part of: A-AFFY-2

AT1G19530
type: EnsemblDatabaseReference

ATCXE13
type: EnsemblDatabaseReference

CYC1
type: EnsemblDatabaseReference

258338_at
type: EFO_0005072
part of: A-AFFY-2

NSP2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.17340395461476
p value: 0.00364310989365774
refers to: NSP2
refers to: 245161_at
t statistic: -7.81028800033148

GRXS13
type: EnsemblDatabaseReference

AT4G10490
type: EnsemblDatabaseReference

264741_at
type: EFO_0005072
part of: A-AFFY-2

THA2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06684959973933
p value: 0.00397157578447426
refers to: 258599_at
refers to: THA2
t statistic: 7.4820051384373

259500_at
type: EFO_0005072
part of: A-AFFY-2

AT1G50740
type: EnsemblDatabaseReference

AT1G19540 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.52955601964593
p value: 0.00153943149194439
refers to: AT1G19540
refers to: 260662_at
t statistic: -11.4623726917629

AT3G03270
type: EnsemblDatabaseReference

AT2G30600 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.3920129203009
p value: 0.00370742435841991
refers to: AT2G30600
refers to: 267523_at
t statistic: -7.71357923562566

258109_at
type: EFO_0005072
part of: A-AFFY-2

262721_at
type: EFO_0005072
part of: A-AFFY-2

AT1G01240 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.68518036930201
p value: 0.00356943462974242
refers to: AT1G01240
refers to: 261026_at
t statistic: -7.86428331912443

AO
type: EnsemblDatabaseReference

260830_at
type: EFO_0005072
part of: A-AFFY-2

261187_at
type: EFO_0005072
part of: A-AFFY-2

PDLP3
type: EnsemblDatabaseReference

KDSB DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.25311578922787
p value: 0.0355086009918049
refers to: KDSB
refers to: 261373_at
t statistic: -3.51613571577889

Phox4 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2643387455159
p value: 0.0190833948964865
refers to: Phox4
refers to: 253458_at
t statistic: 4.2952217063908

267075_at
type: EFO_0005072
part of: A-AFFY-2

CBSDUF4 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.75115940266312
p value: 0.00743292083862187
refers to: CBSDUF4
refers to: 264352_at
t statistic: -5.87511200706019

PG2
type: EnsemblDatabaseReference

254055_at
type: EFO_0005072
part of: A-AFFY-2

260014_at
type: EFO_0005072
part of: A-AFFY-2

ATPER1
type: EnsemblDatabaseReference

AT5G01950
type: EnsemblDatabaseReference

AT1G10110 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.66812563249902
p value: 0.024131879317386
refers to: 257417_at
refers to: AT1G10110
t statistic: 3.97752509804235

262247_at
type: EFO_0005072
part of: A-AFFY-2

ATHB-2
type: EnsemblDatabaseReference

LEA14
type: EnsemblDatabaseReference

(Sample) ecotype/Col-0
type: EFO_0005148
property type: ecotype
property value: Col-0

AT3G19990
type: EnsemblDatabaseReference

AT5G18210
type: EnsemblDatabaseReference

ALC
type: EnsemblDatabaseReference

AT3G12960
type: EnsemblDatabaseReference

RDR5 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02319810414927
p value: 0.0224018482116693
refers to: RDR5
refers to: 266689_at
t statistic: -4.08028152808223

246250_at
type: EFO_0005072
part of: A-AFFY-2

ATGA2OX2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -3.21964902683029
p value: 7.60827748523182E-4
refers to: 260023_at
refers to: ATGA2OX2
t statistic: -15.3619549020525

SKP2A
type: EnsemblDatabaseReference

KDSB
type: EnsemblDatabaseReference

AT1G28680
type: EnsemblDatabaseReference

AT3G04890
type: EnsemblDatabaseReference

AT4G22190 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2024152341801
p value: 0.0406000706377392
refers to: 254356_at
refers to: AT4G22190
t statistic: -3.36524972019181

ERD14
type: EnsemblDatabaseReference

256061_at
type: EFO_0005072
part of: A-AFFY-2

AT1G55200 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.99094671153321
p value: 0.00390602072205522
refers to: AT1G55200
refers to: 259656_at
t statistic: 7.55769693019859

G-TMT UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.12534483705239
p value: 0.0150155687023694
refers to: 262875_at
refers to: G-TMT
t statistic: 4.63616215483701

CYP81F4 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.09952331441368
p value: 0.0153529288675312
refers to: CYP81F4
refers to: 253073_at
t statistic: -10.155437177664

AT4G34950
type: EnsemblDatabaseReference

AT2G03420
type: EnsemblDatabaseReference

CYP76C7
type: EnsemblDatabaseReference

ATLP-1
type: EnsemblDatabaseReference

253124_at
type: EFO_0005072
part of: A-AFFY-2

263207_at
type: EFO_0005072
part of: A-AFFY-2

AT2G24040
type: EnsemblDatabaseReference

ATBCA4 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.16726139917144
p value: 0.00153170446383341
refers to: ATBCA4
refers to: 264313_at
t statistic: 11.6871685592418

AT2G34315
type: EnsemblDatabaseReference

RPSAb UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.07118439531741
p value: 0.00397419286056731
refers to: RPSAb
refers to: 258799_at
t statistic: 7.47827495153844

AT3G03150
type: EnsemblDatabaseReference

AT3G21380
type: EnsemblDatabaseReference

258879_at
type: EFO_0005072
part of: A-AFFY-2

PHYA
type: EnsemblDatabaseReference

262505_at
type: EFO_0005072
part of: A-AFFY-2

263377_at
type: EFO_0005072
part of: A-AFFY-2

RLK UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.04449288960116
p value: 0.00217754393876776
refers to: 246986_at
refers to: RLK
t statistic: 9.45480170497015

252864_at
type: EFO_0005072
part of: A-AFFY-2

253609_at
type: EFO_0005072
part of: A-AFFY-2

AT4G16140
type: EnsemblDatabaseReference

AT1G72100 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.48669184219408
p value: 0.00672224475558669
refers to: 256338_at
refers to: AT1G72100
t statistic: -6.06930236731322

245761_at
type: EFO_0005072
part of: A-AFFY-2

AT5G57790
type: EnsemblDatabaseReference

CYP72C1
type: EnsemblDatabaseReference

HPR
type: EnsemblDatabaseReference

259796_at
type: EFO_0005072
part of: A-AFFY-2

ERL2
type: EnsemblDatabaseReference

AT3G15290
type: EnsemblDatabaseReference

AIL1
type: EnsemblDatabaseReference

HGL1
type: EnsemblDatabaseReference

AT2G33520 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.54750237349366
p value: 0.00995749921542158
refers to: AT2G33520
refers to: 255840_at
t statistic: -5.30343671417256

J8
type: EnsemblDatabaseReference

GBF3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16158109788074
p value: 0.0476106981216102
refers to: GBF3
refers to: 266555_at
t statistic: -3.19717427997597

252048_at
type: EFO_0005072
part of: A-AFFY-2

AT1G47980
type: EnsemblDatabaseReference

247280_at
type: EFO_0005072
part of: A-AFFY-2

AT4G25580 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.39352656943855
p value: 0.016132070893655
refers to: AT4G25580
refers to: 245233_at
t statistic: -4.53329303492664

UGT72E1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.26498862625257
p value: 0.0271036678194491
refers to: UGT72E1
refers to: 252183_at
t statistic: -3.8310003190844

NAM
type: EnsemblDatabaseReference

258380_at
type: EFO_0005072
part of: A-AFFY-2

GAE1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.17412035432216
p value: 0.0149212573211872
refers to: 253631_at
refers to: GAE1
t statistic: 4.64960654635053

APR2
type: EnsemblDatabaseReference

AT4G38220 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08920601524111
p value: 0.0179875682634172
refers to: AT4G38220
refers to: 253033_at
t statistic: -4.38114984417827

AT3G44430
type: EnsemblDatabaseReference

264779_at
type: EFO_0005072
part of: A-AFFY-2

AT4G18950
type: EnsemblDatabaseReference

AT2G30600 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.34951572390064
p value: 0.00772060466195803
refers to: 267524_at
refers to: AT2G30600
t statistic: -5.78430014074458

257234_at
type: EFO_0005072
part of: A-AFFY-2

AT1G55200
type: EnsemblDatabaseReference

AAT1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.26304252885432
p value: 0.0266230590524687
refers to: AAT1
refers to: 254453_at
t statistic: 3.85135443933872

ERD14 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.16592277688801
p value: 0.0212638850641825
refers to: ERD14
refers to: 261749_at
t statistic: 4.15019072775864

263492_at
type: EFO_0005072
part of: A-AFFY-2

AT2G36630
type: EnsemblDatabaseReference

DWF5 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.60710974876315
p value: 0.0140324318748084
refers to: DWF5
refers to: 261865_at
t statistic: -4.74611883222562

AT2G41710 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.44446154400401
p value: 0.0157209452556629
refers to: AT2G41710
refers to: 260498_at
t statistic: -4.57067763575618

ATEXPA8
type: EnsemblDatabaseReference

LKR/SDH
type: EnsemblDatabaseReference

CIA2
type: EnsemblDatabaseReference

AT1G66760
type: EnsemblDatabaseReference

AT1G78170 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09702029184253
p value: 0.015705719765985
refers to: AT1G78170
refers to: 260081_at
t statistic: 4.57373837671053

ACHT4 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16273733284332
p value: 0.00470419015495121
refers to: 264779_at
refers to: ACHT4
t statistic: -6.99840030543169

RPSAb
type: EnsemblDatabaseReference

AT3G03060
type: EnsemblDatabaseReference

AT2G39570
type: EnsemblDatabaseReference

250372_at
type: EFO_0005072
part of: A-AFFY-2

258151_at
type: EFO_0005072
part of: A-AFFY-2

AT2G19385 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.11824948379664
p value: 0.00356943462974242
refers to: AT2G19385
refers to: 267309_at
t statistic: 7.8725570846713

ABF4
type: EnsemblDatabaseReference

HCC2
type: EnsemblDatabaseReference

PDCB3 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15318952979851
p value: 0.0398265110652744
refers to: 255779_at
refers to: PDCB3
t statistic: -5.89074439758982

260897_at
type: EFO_0005072
part of: A-AFFY-2

PER17 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.46783217812004
p value: 0.0106963793398299
refers to: 264001_at
refers to: PER17
t statistic: 5.20037913175612

259782_at
type: EFO_0005072
part of: A-AFFY-2

AtCXE5
type: EnsemblDatabaseReference

LGALDH
type: EnsemblDatabaseReference

AT3G51440 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12074816825783
p value: 0.00370742435841991
refers to: AT3G51440
refers to: 252068_at
t statistic: -7.72236298185361

245029_at
type: EFO_0005072
part of: A-AFFY-2

AT4G02690
type: EnsemblDatabaseReference

BHLH13 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.83051375750043
p value: 6.63457224921488E-4
refers to: BHLH13
refers to: 261050_at
t statistic: -16.2554112865101

ATEM1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.6163981509194
p value: 0.00888795826442878
refers to: ATEM1
refers to: 246299_at
t statistic: -5.50296996841666

HAI3
type: EnsemblDatabaseReference

264894_at
type: EFO_0005072
part of: A-AFFY-2

267503_at
type: EFO_0005072
part of: A-AFFY-2

AT1G66180
type: EnsemblDatabaseReference

AT1G71870
type: EnsemblDatabaseReference

247949_at
type: EFO_0005072
part of: A-AFFY-2

260913_at
type: EFO_0005072
part of: A-AFFY-2

AT2G41710
type: EnsemblDatabaseReference

PDCB3
type: EnsemblDatabaseReference

261957_at
type: EFO_0005072
part of: A-AFFY-2

KCS16
type: EnsemblDatabaseReference

SKIP27 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.20358667810939
p value: 0.00182095596064027
refers to: SKIP27
refers to: 254424_at
t statistic: 10.2702662808798

266656_at
type: EFO_0005072
part of: A-AFFY-2

GLX2-5
type: EnsemblDatabaseReference

260668_at
type: EFO_0005072
part of: A-AFFY-2

LEA14 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21271610251181
p value: 0.0147103606636993
refers to: LEA14
refers to: 259426_at
t statistic: -4.6726463579859

GLX2-5 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1185440599924
p value: 0.00639448306448021
refers to: 263243_at
refers to: GLX2-5
t statistic: -6.23049247215696

AT1G12230
type: EnsemblDatabaseReference

TMK1
type: EnsemblDatabaseReference

AHA2
type: EnsemblDatabaseReference

ULT1
type: EnsemblDatabaseReference

BHLH13
type: EnsemblDatabaseReference

AT4G31830
type: EnsemblDatabaseReference

ATNUDT13
type: EnsemblDatabaseReference

GLN1;5
type: EnsemblDatabaseReference

AT4G27530 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5069236475308
p value: 0.00657025047891852
refers to: AT4G27530
refers to: 253870_at
t statistic: -6.13538959121891

ABCB15
type: EnsemblDatabaseReference

AT4G20860
type: EnsemblDatabaseReference

AT4G39130
type: EnsemblDatabaseReference

CPK30
type: EnsemblDatabaseReference

EXL2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2330985469585
p value: 0.00744808574074605
refers to: 247280_at
refers to: EXL2
t statistic: -5.84797081068634

AT1G12200
type: EnsemblDatabaseReference

245244_at
type: EFO_0005072
part of: A-AFFY-2

247035_at
type: EFO_0005072
part of: A-AFFY-2

AT1G21780
type: EnsemblDatabaseReference

PDF1
type: EnsemblDatabaseReference

AT1G19130 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02152002602647
p value: 0.0294673593558905
refers to: AT1G19130
refers to: 259474_at
t statistic: -3.73522364953058

KUOX1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.4356263142385
p value: 0.00441401414715962
refers to: KUOX1
refers to: 250634_at
t statistic: -7.20258332001802

261728_at
type: EFO_0005072
part of: A-AFFY-2

256516_at
type: EFO_0005072
part of: A-AFFY-2

AT1G49050
type: EnsemblDatabaseReference

AT1G05840
type: EnsemblDatabaseReference

AT5G53220 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.5392937300452
p value: 0.00354929759061207
refers to: AT5G53220
refers to: 248251_at
t statistic: -7.89925556951384

261485_at
type: EFO_0005072
part of: A-AFFY-2

AT2G40435
type: EnsemblDatabaseReference

250501_at
type: EFO_0005072
part of: A-AFFY-2

AT3G09470 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.07864042464598
p value: 0.00733637439992553
refers to: AT3G09470
refers to: 258705_at
t statistic: -5.89158174143774

AT1G10740
type: EnsemblDatabaseReference

AT4G20930 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.09401608478889
p value: 0.02359727203234
refers to: 254445_at
refers to: AT4G20930
t statistic: -4.00861081796119

AT1G49050 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.05092338093063
p value: 0.0353660333270919
refers to: AT1G49050
refers to: 260772_at
t statistic: 3.52069641394814

AT1G50740 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01293721422307
p value: 0.018948545517537
refers to: AT1G50740
refers to: 246631_at
t statistic: -4.30964316779158

RPA70C
type: EnsemblDatabaseReference

AT4G20860 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.50437519459067
p value: 0.00876719144550879
refers to: AT4G20860
refers to: 254447_at
t statistic: 5.52654113972664

IAA11
type: EnsemblDatabaseReference

AHP2
type: EnsemblDatabaseReference

PRL2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06170404570309
p value: 0.00176067208436504
refers to: PRL2
refers to: 258380_at
t statistic: 10.476390938542

253307_at
type: EFO_0005072
part of: A-AFFY-2

LCL1
type: EnsemblDatabaseReference

AT3G05260
type: EnsemblDatabaseReference

249139_at
type: EFO_0005072
part of: A-AFFY-2

CYCP1;1
type: EnsemblDatabaseReference

249583_at
type: EFO_0005072
part of: A-AFFY-2

245602_at
type: EFO_0005072
part of: A-AFFY-2

EXO
type: EnsemblDatabaseReference

ATEXPA3
type: EnsemblDatabaseReference

AT4G38220
type: EnsemblDatabaseReference

AT1G30860 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.42948275665639
p value: 0.0159348626519574
refers to: AT1G30860
refers to: 265128_at
t statistic: -4.55188758363356

AT1G49500
type: EnsemblDatabaseReference

AT3G50340
type: EnsemblDatabaseReference

AT4G17840 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.26003722353365
p value: 0.00398749759531809
refers to: 254691_at
refers to: AT4G17840
t statistic: -7.47134018361557

251758_at
type: EFO_0005072
part of: A-AFFY-2

AT3G14430
type: EnsemblDatabaseReference

AT3G63160 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0988133946786
p value: 0.017191590931008
refers to: AT3G63160
refers to: 251155_at
t statistic: -4.44266535532865

AT1G22850
type: EnsemblDatabaseReference

ATUPS5 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.33760951653738
p value: 0.00952115791945245
refers to: 261013_at
refers to: ATUPS5
t statistic: -5.39431774127433

AT1G70000
type: EnsemblDatabaseReference

AMT1;1
type: EnsemblDatabaseReference

266984_at
type: EFO_0005072
part of: A-AFFY-2

MAPKKK20
type: EnsemblDatabaseReference

246274_at
type: EFO_0005072
part of: A-AFFY-2

251658_at
type: EFO_0005072
part of: A-AFFY-2

GRXC6 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.09254880095904
p value: 0.00443843057150357
refers to: 253382_at
refers to: GRXC6
t statistic: 7.19117600929499

ECT6
type: EnsemblDatabaseReference

ATSKP2;2
type: EnsemblDatabaseReference

RDR5
type: EnsemblDatabaseReference

PME7
type: EnsemblDatabaseReference

AT5G24460 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06804441888923
p value: 0.0429659251818798
refers to: 249736_at
refers to: AT5G24460
t statistic: 5.50726814872198

254024_at
type: EFO_0005072
part of: A-AFFY-2

PARP3
type: EnsemblDatabaseReference

260967_at
type: EFO_0005072
part of: A-AFFY-2

RALFL33
type: EnsemblDatabaseReference

AT3G61870
type: EnsemblDatabaseReference

255900_at
type: EFO_0005072
part of: A-AFFY-2

249082_at
type: EFO_0005072
part of: A-AFFY-2

DJ1B
type: EnsemblDatabaseReference

AT2G42750
type: EnsemblDatabaseReference

253864_at
type: EFO_0005072
part of: A-AFFY-2

AT5G56350
type: EnsemblDatabaseReference

(Assay) Col-0, red light, biological rep2
type: Assay
identifier: Col-0, red light, biological rep2
has participant: A-AFFY-2

264522_at
type: EFO_0005072
part of: A-AFFY-2

GCL2
type: EnsemblDatabaseReference

AT1G31240 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.07649996709638
p value: 0.017395453986608
refers to: AT1G31240
refers to: 263702_at
t statistic: 4.42337164341905

AT3G57030 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.11018395692854
p value: 0.00153305693311254
refers to: AT3G57030
refers to: 251679_at
t statistic: -11.6018234464175

256228_at
type: EFO_0005072
part of: A-AFFY-2

CRK2
type: EnsemblDatabaseReference

AT1G56700 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.19472576094092
p value: 0.00201438534069138
refers to: 245626_at
refers to: AT1G56700
t statistic: 9.78191562761769

PEN3
type: EnsemblDatabaseReference

HLS1
type: EnsemblDatabaseReference

AT3G51440
type: EnsemblDatabaseReference

262629_at
type: EFO_0005072
part of: A-AFFY-2

257417_at
type: EFO_0005072
part of: A-AFFY-2

AT1G14950
type: EnsemblDatabaseReference

256815_at
type: EFO_0005072
part of: A-AFFY-2

AT5G45310
type: EnsemblDatabaseReference

THA2
type: EnsemblDatabaseReference

AT3G17780 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13399815966365
p value: 0.0104084888644175
refers to: 257867_at
refers to: AT3G17780
t statistic: -5.23945995541313

PME44 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.83760848207456
p value: 0.00473210589391427
refers to: 253372_at
refers to: PME44
t statistic: 6.98731873904482

AT3G61900 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.35974572156439
p value: 0.00153170446383341
refers to: 251291_at
refers to: AT3G61900
t statistic: -11.6363195216697

RSW10
type: EnsemblDatabaseReference

AT1G30860
type: EnsemblDatabaseReference

PP2A10 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09872138068665
p value: 0.0188395357755234
refers to: PP2A10
refers to: 264463_at
t statistic: 4.3156099138758

GBF3
type: EnsemblDatabaseReference

252888_at
type: EFO_0005072
part of: A-AFFY-2

UGT73B5 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27505427464955
p value: 0.0429964619629657
refers to: UGT73B5
refers to: 265499_at
t statistic: 5.48383728858048

RTNLB13
type: EnsemblDatabaseReference

AT1G78100
type: EnsemblDatabaseReference

ATL57
type: EnsemblDatabaseReference

AT3G54000
type: EnsemblDatabaseReference

CRU3
type: EnsemblDatabaseReference

AT2G19320
type: EnsemblDatabaseReference

AT1G17830 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.6571903007421
p value: 0.00153170446383341
refers to: AT1G17830
refers to: 255900_at
t statistic: -11.662408112021

AGD2
type: EnsemblDatabaseReference

265094_at
type: EFO_0005072
part of: A-AFFY-2

HTR2
type: EnsemblDatabaseReference

AT4G35780
type: EnsemblDatabaseReference

258921_at
type: EFO_0005072
part of: A-AFFY-2

258919_at
type: EFO_0005072
part of: A-AFFY-2

TTL3 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.40982395634504
p value: 0.0346746852604836
refers to: TTL3
refers to: 263499_at
t statistic: -6.20402712881464

CRA1
type: EnsemblDatabaseReference

BGLU28 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.47303143440972
p value: 0.0426222228497861
refers to: 267389_at
refers to: BGLU28
t statistic: -5.60950814732924

ATCTH
type: EnsemblDatabaseReference

ZFP4 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.22068020882762
p value: 0.0193226540218519
refers to: ZFP4
refers to: 256528_at
t statistic: -9.21695020518857

BGAL3
type: EnsemblDatabaseReference

AT2G34315 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.62521705126229
p value: 6.21757337851341E-4
refers to: AT2G34315
refers to: 267041_at
t statistic: -16.777688616316

252659_at
type: EFO_0005072
part of: A-AFFY-2

262744_at
type: EFO_0005072
part of: A-AFFY-2

PYL6 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.51322026663167
p value: 0.00458834218278393
refers to: 263836_at
refers to: PYL6
t statistic: 7.06554488952091

HAI2
type: EnsemblDatabaseReference

AT1G29680 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.33303802114562
p value: 7.60827748523182E-4
refers to: 259782_at
refers to: AT1G29680
t statistic: -15.0504036527098

252117_at
type: EFO_0005072
part of: A-AFFY-2

256069_at
type: EFO_0005072
part of: A-AFFY-2

252561_at
type: EFO_0005072
part of: A-AFFY-2

AT1G30690 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.69239548484264
p value: 0.00206387023957797
refers to: 263226_at
refers to: AT1G30690
t statistic: 9.65579120834842

259593_at
type: EFO_0005072
part of: A-AFFY-2

PER17
type: EnsemblDatabaseReference

AT2G15695
type: EnsemblDatabaseReference

250668_at
type: EFO_0005072
part of: A-AFFY-2

251243_at
type: EFO_0005072
part of: A-AFFY-2

LEA18 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.07381572077367
p value: 0.0192134622291334
refers to: LEA18
refers to: 266544_at
t statistic: -4.2825557609497

256114_at
type: EFO_0005072
part of: A-AFFY-2

CP1
type: EnsemblDatabaseReference

CYC1
type: EnsemblDatabaseReference

UGT72E1
type: EnsemblDatabaseReference

265894_at
type: EFO_0005072
part of: A-AFFY-2

261768_at
type: EFO_0005072
part of: A-AFFY-2

TSO2
type: EnsemblDatabaseReference

AT4G10490
type: EnsemblDatabaseReference

260481_at
type: EFO_0005072
part of: A-AFFY-2

RRA2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.02941725384526
p value: 0.00966314059770184
refers to: 259956_at
refers to: RRA2
t statistic: -5.36156122004258

CRU2
type: EnsemblDatabaseReference

scpl25
type: EnsemblDatabaseReference

AT1G05510 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.17292699122346
p value: 0.00202515751383811
refers to: AT1G05510
refers to: 263175_at
t statistic: -9.73308109380846

AT1G50740
type: EnsemblDatabaseReference

AT2G34560
type: EnsemblDatabaseReference

258075_at
type: EFO_0005072
part of: A-AFFY-2

LGO UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.30495795353554
p value: 0.00576274363574406
refers to: 258919_at
refers to: LGO
t statistic: 6.48630922406225

BGLU19 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.77461655806535
p value: 0.00441401414715962
refers to: BGLU19
refers to: 256814_at
t statistic: -7.20313898920575

263432_at
type: EFO_0005072
part of: A-AFFY-2

252058_at
type: EFO_0005072
part of: A-AFFY-2

AT2G39570 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.13450546558209
p value: 0.0131521680276588
refers to: AT2G39570
refers to: 266984_at
t statistic: -4.85386832888374

AGL67
type: EnsemblDatabaseReference

DYL1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.06819763135386
p value: 0.0131533275341966
refers to: DYL1
refers to: 245668_at
t statistic: -4.85281023574946

245642_at
type: EFO_0005072
part of: A-AFFY-2

RPS11B UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03954539681337
p value: 0.0114824099116581
refers to: 253598_at
refers to: RPS11B
t statistic: 5.07602925850239

AT1G06760
type: EnsemblDatabaseReference

(Assay) Col-0, dark, biological rep2
type: Assay
identifier: Col-0, dark, biological rep2
has participant: A-AFFY-2

APP
type: EnsemblDatabaseReference

E12A11 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.44318583963147
p value: 0.00182095596064027
refers to: E12A11
refers to: 256073_at
t statistic: -10.279804546067

CML36
type: EnsemblDatabaseReference

AT5G55180 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.52430520643415
p value: 0.00333950540164476
refers to: 248100_at
refers to: AT5G55180
t statistic: 8.00324234650274

B5 #6 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0541891415785
p value: 0.00881319871487252
refers to: B5 #6
refers to: 261011_at
t statistic: 5.51309366542801

255625_at
type: EFO_0005072
part of: A-AFFY-2

AT2G28400
type: EnsemblDatabaseReference

AT4G15620
type: EnsemblDatabaseReference

AT2G44310
type: EnsemblDatabaseReference

ATPER1
type: EnsemblDatabaseReference

260023_at
type: EFO_0005072
part of: A-AFFY-2

AT2G26190 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16830474168096
p value: 0.00375400480244047
refers to: 267381_at
refers to: AT2G26190
t statistic: -7.68221528625222

CALS1
type: EnsemblDatabaseReference

267055_at
type: EFO_0005072
part of: A-AFFY-2

ALC
type: EnsemblDatabaseReference

AT1G16510
type: EnsemblDatabaseReference

264562_at
type: EFO_0005072
part of: A-AFFY-2

252316_at
type: EFO_0005072
part of: A-AFFY-2

259348_at
type: EFO_0005072
part of: A-AFFY-2

LTP2
type: EnsemblDatabaseReference

SKP2A
type: EnsemblDatabaseReference

KDSB
type: EnsemblDatabaseReference

PIRL8
type: EnsemblDatabaseReference

AT1G59660
type: EnsemblDatabaseReference

AT1G28680
type: EnsemblDatabaseReference

AT1G22060
type: EnsemblDatabaseReference

259935_at
type: EFO_0005072
part of: A-AFFY-2

253090_at
type: EFO_0005072
part of: A-AFFY-2

257899_at
type: EFO_0005072
part of: A-AFFY-2

AGD2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.65439865991316
p value: 0.00795482728022459
refers to: AGD2
refers to: 264941_at
t statistic: -5.70961155059028

ERD14
type: EnsemblDatabaseReference

BKI1
type: EnsemblDatabaseReference

AT5G58160 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.49893718154208
p value: 0.00264870308681701
refers to: 247861_at
refers to: AT5G58160
t statistic: -8.72432120845473

CIL
type: EnsemblDatabaseReference

266695_at
type: EFO_0005072
part of: A-AFFY-2

AT2G47680 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.12536521229344
p value: 0.0238562105323349
refers to: AT2G47680
refers to: 266511_at
t statistic: 3.99349735226536

AT4G34950
type: EnsemblDatabaseReference

249065_at
type: EFO_0005072
part of: A-AFFY-2

LGO
type: EnsemblDatabaseReference

AT2G24040
type: EnsemblDatabaseReference

247861_at
type: EFO_0005072
part of: A-AFFY-2

AT2G34315
type: EnsemblDatabaseReference

AGP15
type: EnsemblDatabaseReference

AT3G03150
type: EnsemblDatabaseReference

PIMT2
type: EnsemblDatabaseReference

247317_at
type: EFO_0005072
part of: A-AFFY-2

ATFD1
type: EnsemblDatabaseReference

266566_at
type: EFO_0005072
part of: A-AFFY-2

AT1G80440
type: EnsemblDatabaseReference

PHYA
type: EnsemblDatabaseReference

CIPK9 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.36256238498514
p value: 0.00526294050922077
refers to: CIPK9
refers to: 261581_at
t statistic: 6.7425431168817

AT1G10740 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.37631281577056
p value: 0.00409829093934162
refers to: AT1G10740
refers to: 262786_at
t statistic: 7.40567266469683

AT4G31320 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.34544951231049
p value: 0.0399545189137858
refers to: AT4G31320
refers to: 253515_at
t statistic: -5.86993065105806

AT4G16140
type: EnsemblDatabaseReference

267041_at
type: EFO_0005072
part of: A-AFFY-2

255779_at
type: EFO_0005072
part of: A-AFFY-2

AT5G57790
type: EnsemblDatabaseReference

254492_at
type: EFO_0005072
part of: A-AFFY-2

HPR
type: EnsemblDatabaseReference

AT3G15290
type: EnsemblDatabaseReference

HGL1
type: EnsemblDatabaseReference

AT1G31750
type: EnsemblDatabaseReference

AGO2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27245426547491
p value: 0.035778106437592
refers to: 262548_at
refers to: AGO2
t statistic: 3.50912826347956

ERD14 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.48942362095041
p value: 0.0413044263470289
refers to: ERD14
refers to: 261749_at
t statistic: 5.75220074351124

ATGA2OX2
type: EnsemblDatabaseReference

AT1G47980
type: EnsemblDatabaseReference

259091_at
type: EFO_0005072
part of: A-AFFY-2

AT3G52500
type: EnsemblDatabaseReference

AT5G24460
type: EnsemblDatabaseReference

254363_at
type: EFO_0005072
part of: A-AFFY-2

AT2G32090
type: EnsemblDatabaseReference

258487_at
type: EFO_0005072
part of: A-AFFY-2

EXGT-A1
type: EnsemblDatabaseReference

AT4G22960
type: EnsemblDatabaseReference

APR2
type: EnsemblDatabaseReference

AtGolS2
type: EnsemblDatabaseReference

264888_at
type: EFO_0005072
part of: A-AFFY-2

AT3G16150 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.41682739943734
p value: 0.0270165393040134
refers to: 258338_at
refers to: AT3G16150
t statistic: 3.83460796460101

AT1G67920
type: EnsemblDatabaseReference

249736_at
type: EFO_0005072
part of: A-AFFY-2

AT3G44430
type: EnsemblDatabaseReference

AT4G18950
type: EnsemblDatabaseReference

252615_at
type: EFO_0005072
part of: A-AFFY-2

261266_at
type: EFO_0005072
part of: A-AFFY-2

AGP21 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15994767469213
p value: 0.0190480620312128
refers to: AGP21
refers to: 259664_at
t statistic: 4.29752027852906

ATEXPA8
type: EnsemblDatabaseReference

LKR/SDH
type: EnsemblDatabaseReference

AT1G66760
type: EnsemblDatabaseReference

AT2G27500 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.47259536514477
p value: 0.0150424924988803
refers to: 265648_at
refers to: AT2G27500
t statistic: 4.63218560668016

CIA2
type: EnsemblDatabaseReference

(Assay) pil5, red light, biological rep1
type: Assay
identifier: pil5, red light, biological rep1
has participant: A-AFFY-2

M17
type: EnsemblDatabaseReference

AT3G15780
type: EnsemblDatabaseReference

AT4G18920
type: EnsemblDatabaseReference

AT1G03610
type: EnsemblDatabaseReference

RPSAb
type: EnsemblDatabaseReference

AT1G17860 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.25305597290411
p value: 0.00314812365583793
refers to: AT1G17860
refers to: 255904_at
t statistic: -8.14791867304795

AT3G03060
type: EnsemblDatabaseReference

AT2G39570
type: EnsemblDatabaseReference

ASG4 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.89603039665236
p value: 0.00911143343728581
refers to: 259432_at
refers to: ASG4
t statistic: -5.46427245216104

248789_at
type: EFO_0005072
part of: A-AFFY-2

RPL26B
type: EnsemblDatabaseReference

ADK
type: EnsemblDatabaseReference

261581_at
type: EFO_0005072
part of: A-AFFY-2

HCC2
type: EnsemblDatabaseReference

AT1G16850 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.70560291623603
p value: 0.00194108865771302
refers to: AT1G16850
refers to: 256114_at
t statistic: -10.0384130106515

258845_at
type: EFO_0005072
part of: A-AFFY-2

258158_at
type: EFO_0005072
part of: A-AFFY-2

AT1G71250 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.73393235599503
p value: 0.00264870308681701
refers to: AT1G71250
refers to: 259935_at
t statistic: -8.7210748416174

245140_at
type: EFO_0005072
part of: A-AFFY-2

BGAL1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03412920736631
p value: 0.0398094180356411
refers to: 256772_at
refers to: BGAL1
t statistic: 3.38757773689112

266423_at
type: EFO_0005072
part of: A-AFFY-2

263515_at
type: EFO_0005072
part of: A-AFFY-2

AT1G23070
type: EnsemblDatabaseReference

AtCXE5
type: EnsemblDatabaseReference

E12A11
type: EnsemblDatabaseReference

AT5G42720 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.48995162845032
p value: 0.00284901716023389
refers to: AT5G42720
refers to: 249214_at
t statistic: 8.49233096186124

LGALDH
type: EnsemblDatabaseReference

264532_at
type: EFO_0005072
part of: A-AFFY-2

CMTA4
type: EnsemblDatabaseReference

KCS20
type: EnsemblDatabaseReference

263243_at
type: EFO_0005072
part of: A-AFFY-2

AT1G71870
type: EnsemblDatabaseReference

ATEXPA8 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.3044394553983
p value: 0.0195564436796489
refers to: ATEXPA8
refers to: 255822_at
t statistic: 4.25753807088728

AT1G31660
type: EnsemblDatabaseReference

AT2G41710
type: EnsemblDatabaseReference

PDCB3
type: EnsemblDatabaseReference

PIL2
type: EnsemblDatabaseReference

KCS16
type: EnsemblDatabaseReference

AT1G25275
type: EnsemblDatabaseReference

COX1
type: EnsemblDatabaseReference

GLX2-5
type: EnsemblDatabaseReference

CYP72C1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17969372341092
p value: 0.00246334458259991
refers to: CYP72C1
refers to: 262525_at
t statistic: -8.92217456527728

CRU3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2519674636711
p value: 0.00264870308681701
refers to: CRU3
refers to: 253767_at
t statistic: -8.6948706134006

AOP3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.35358557592017
p value: 0.0487267227066751
refers to: AOP3
refers to: 255471_at
t statistic: -3.17321727867652

264187_at
type: EFO_0005072
part of: A-AFFY-2

TMK1
type: EnsemblDatabaseReference

AHA2
type: EnsemblDatabaseReference

Hop1
type: EnsemblDatabaseReference

ULT1
type: EnsemblDatabaseReference

MDR4
type: EnsemblDatabaseReference

BHLH13
type: EnsemblDatabaseReference

CAT3
type: EnsemblDatabaseReference

254691_at
type: EFO_0005072
part of: A-AFFY-2

ATMYC2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03532991805888
p value: 0.00526294050922077
refers to: 261713_at
refers to: ATMYC2
t statistic: -6.74245644877926

GLN1;5
type: EnsemblDatabaseReference

AT4G20860
type: EnsemblDatabaseReference

CPK30
type: EnsemblDatabaseReference

AT4G39130
type: EnsemblDatabaseReference

ABCB15
type: EnsemblDatabaseReference

AT1G12200
type: EnsemblDatabaseReference

ACLA-1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0015646820638
p value: 0.0390335170961017
refers to: ACLA-1
refers to: 261833_at
t statistic: -3.4128275220869

266393_at
type: EFO_0005072
part of: A-AFFY-2

RPL26B UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.17466025572597
p value: 0.00300433859295874
refers to: RPL26B
refers to: 247010_at
t statistic: 8.29682313564665

254120_at
type: EFO_0005072
part of: A-AFFY-2

AT3G19660 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23109347193004
p value: 0.00153170446383341
refers to: AT3G19660
refers to: 257074_at
t statistic: -11.7011665553039

AT1G16850
type: EnsemblDatabaseReference

GBF2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.1239319494003
p value: 0.00881319871487252
refers to: GBF2
refers to: 255625_at
t statistic: -5.51358891165433

AT1G49050
type: EnsemblDatabaseReference

AT1G05840
type: EnsemblDatabaseReference

MPK9
type: EnsemblDatabaseReference

AT2G03280
type: EnsemblDatabaseReference

SHL1
type: EnsemblDatabaseReference

MPK9 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.06830873752078
p value: 0.00664609561395637
refers to: MPK9
refers to: 258123_at
t statistic: 6.09649254040544

AT2G40435
type: EnsemblDatabaseReference

RD21
type: EnsemblDatabaseReference

255064_at
type: EFO_0005072
part of: A-AFFY-2

260276_at
type: EFO_0005072
part of: A-AFFY-2

ENODL8 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.6861710966335
p value: 0.0346746852604836
refers to: ENODL8
refers to: 261975_at
t statistic: -6.26221004535945

261023_at
type: EFO_0005072
part of: A-AFFY-2

261708_at
type: EFO_0005072
part of: A-AFFY-2

ATASE2
type: EnsemblDatabaseReference

AtSIP2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.17563523855361
p value: 0.0223986798684664
refers to: AtSIP2
refers to: 251642_at
t statistic: 4.08196932966606

AT1G17430
type: EnsemblDatabaseReference

AT1G72940
type: EnsemblDatabaseReference

256938_at
type: EFO_0005072
part of: A-AFFY-2

EEL DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.37182779490631
p value: 0.00444702810750309
refers to: 267075_at
refers to: EEL
t statistic: -7.15364255163266

LCL1
type: EnsemblDatabaseReference

AT3G05260
type: EnsemblDatabaseReference

254605_at
type: EFO_0005072
part of: A-AFFY-2

CYCP1;1
type: EnsemblDatabaseReference

Y-2
type: EnsemblDatabaseReference

MERI5B UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10242332409228
p value: 0.01613790463567
refers to: 253666_at
refers to: MERI5B
t statistic: 4.53167685241683

AT2G36630 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.1457537167906
p value: 0.00356943462974242
refers to: AT2G36630
refers to: 265203_at
t statistic: 7.87107701523456

265705_at
type: EFO_0005072
part of: A-AFFY-2

AMT1;1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15728038619696
p value: 0.00296736219055669
refers to: 254723_at
refers to: AMT1;1
t statistic: 8.32936176655608

NPC3 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.22807560649674
p value: 0.0398265110652744
refers to: NPC3
refers to: 259169_at
t statistic: 5.89187564869452

TPS06 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.57859243873826
p value: 0.0415863086113476
refers to: 264720_at
refers to: TPS06
t statistic: 5.66972418771651

FH2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03349341695115
p value: 0.0171252000312692
refers to: FH2
refers to: 260565_at
t statistic: 4.44960597672605

AT2G03420 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06228811072653
p value: 0.0235951365086443
refers to: AT2G03420
refers to: 265704_at
t statistic: -7.38826424619132

262525_at
type: EFO_0005072
part of: A-AFFY-2

AT3G57030
type: EnsemblDatabaseReference

AT3G14430
type: EnsemblDatabaseReference

HCAR
type: EnsemblDatabaseReference

253631_at
type: EFO_0005072
part of: A-AFFY-2

GMI1
type: EnsemblDatabaseReference

AT1G22850
type: EnsemblDatabaseReference

258799_at
type: EFO_0005072
part of: A-AFFY-2

PHO1
type: EnsemblDatabaseReference

AMT1;1
type: EnsemblDatabaseReference

IDH-VI
type: EnsemblDatabaseReference

MAPKKK20
type: EnsemblDatabaseReference

Analysis of 'pil5-1' vs 'wild type' in 'far-red light'
type: MicroarrayDifferentialExpressionAnalysis

ATSKP2;2
type: EnsemblDatabaseReference

RDR5
type: EnsemblDatabaseReference

AT5G58160
type: EnsemblDatabaseReference

AT1G08170
type: EnsemblDatabaseReference

AT1G12200 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.49249799783113
p value: 0.00231744680994065
refers to: AT1G12200
refers to: 261023_at
t statistic: -9.06707156292311

RALFL33
type: EnsemblDatabaseReference

252927_at
type: EFO_0005072
part of: A-AFFY-2

AT3G61870
type: EnsemblDatabaseReference

262153_at
type: EFO_0005072
part of: A-AFFY-2

251640_at
type: EFO_0005072
part of: A-AFFY-2

CIPK9
type: EnsemblDatabaseReference

anac103 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.95380534916504
p value: 0.0123622960469003
refers to: 247317_at
refers to: anac103
t statistic: 4.95619473287972

AT3G19660
type: EnsemblDatabaseReference

AT2G33520
type: EnsemblDatabaseReference

AGK2
type: EnsemblDatabaseReference

ATNADP-ME1
type: EnsemblDatabaseReference

255048_at
type: EFO_0005072
part of: A-AFFY-2

262495_at
type: EFO_0005072
part of: A-AFFY-2

AT5G54000
type: EnsemblDatabaseReference

AT1G78170
type: EnsemblDatabaseReference

AT1G66760 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.34898932819682
p value: 0.0116372215546599
refers to: 256324_at
refers to: AT1G66760
t statistic: -5.05632495251181

AT2G33630 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23523477094884
p value: 0.0118175936949758
refers to: AT2G33630
refers to: 255797_at
t statistic: -5.03183096937733

GBF3
type: EnsemblDatabaseReference

AT5G45310 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.7844415563247
p value: 0.00241015996437052
refers to: AT5G45310
refers to: 248969_at
t statistic: -8.97188415859925

AT1G48870
type: EnsemblDatabaseReference

AT3G52060
type: EnsemblDatabaseReference

257841_at
type: EFO_0005072
part of: A-AFFY-2

AT1G78100
type: EnsemblDatabaseReference

257154_at
type: EFO_0005072
part of: A-AFFY-2

AtSTS DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.05286046400843
p value: 0.00222497875680134
refers to: AtSTS
refers to: 255550_at
t statistic: -9.22461352964292

AT3G54000
type: EnsemblDatabaseReference

CRU3
type: EnsemblDatabaseReference

AT2G19320
type: EnsemblDatabaseReference

AT1G12230 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08047059140451
p value: 0.0331263162011919
refers to: AT1G12230
refers to: 260967_at
t statistic: -3.59786891052998

261077_at
type: EFO_0005072
part of: A-AFFY-2

263555_at
type: EFO_0005072
part of: A-AFFY-2

252183_at
type: EFO_0005072
part of: A-AFFY-2

SGR2
type: EnsemblDatabaseReference

AT4G35780
type: EnsemblDatabaseReference

HTR2
type: EnsemblDatabaseReference

AT4G18950 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27694314617904
p value: 0.00952115791945245
refers to: 254605_at
refers to: AT4G18950
t statistic: 5.39545989785513

AT1G17860
type: EnsemblDatabaseReference

253372_at
type: EFO_0005072
part of: A-AFFY-2

ATPGP1
type: EnsemblDatabaseReference

253515_at
type: EFO_0005072
part of: A-AFFY-2

ELP
type: EnsemblDatabaseReference

PYL2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.79473288519758
p value: 0.00448612764928115
refers to: 266895_at
refers to: PYL2
t statistic: 7.1090321404621

BGAL3
type: EnsemblDatabaseReference

HAI2
type: EnsemblDatabaseReference

263183_at
type: EFO_0005072
part of: A-AFFY-2

ATPME3
type: EnsemblDatabaseReference

AT-GTL1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09606488960393
p value: 0.00942374528896862
refers to: AT-GTL1
refers to: 261594_at
t statistic: 5.41171329086526

AT1G11410
type: EnsemblDatabaseReference

AT1G14960 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.95459511902907
p value: 0.00430392526303362
refers to: AT1G14960
refers to: 262838_at
t statistic: -7.26778827704581

254287_at
type: EFO_0005072
part of: A-AFFY-2

259845_at
type: EFO_0005072
part of: A-AFFY-2

AT4G33980
type: EnsemblDatabaseReference

ATNADP-ME1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.78089127836523
p value: 0.0107498232857834
refers to: ATNADP-ME1
refers to: 266690_at
t statistic: -5.19082215232465

AT3G25870
type: EnsemblDatabaseReference

PER17
type: EnsemblDatabaseReference

AT2G15695
type: EnsemblDatabaseReference

AT2G19810
type: EnsemblDatabaseReference

AT4G31270 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.51214413637067
p value: 0.00464309652618939
refers to: AT4G31270
refers to: 253543_at
t statistic: -7.02883633308363

246582_at
type: EFO_0005072
part of: A-AFFY-2

254187_at
type: EFO_0005072
part of: A-AFFY-2

AT4G18650
type: EnsemblDatabaseReference

264957_at
type: EFO_0005072
part of: A-AFFY-2

CP1
type: EnsemblDatabaseReference

AT5G45670 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -3.58793146601339
p value: 0.0346746852604836
refers to: AT5G45670
refers to: 248912_at
t statistic: -6.33532384133308

UGT72E1
type: EnsemblDatabaseReference

TSO2
type: EnsemblDatabaseReference

(Assay) pil5, dark, biological rep2
type: Assay
identifier: pil5, dark, biological rep2
has participant: A-AFFY-2

AT3G55690
type: EnsemblDatabaseReference

RRA2
type: EnsemblDatabaseReference

RAP2.4
type: EnsemblDatabaseReference

CRU2
type: EnsemblDatabaseReference

scpl25
type: EnsemblDatabaseReference

VRN5
type: EnsemblDatabaseReference

258871_at
type: EFO_0005072
part of: A-AFFY-2

AT1G19540
type: EnsemblDatabaseReference

AT2G34560
type: EnsemblDatabaseReference

258327_at
type: EFO_0005072
part of: A-AFFY-2

AT3G16990 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.23536091324516
p value: 0.00722277454576419
refers to: AT3G16990
refers to: 257888_at
t statistic: -5.92574192029146

ATSAR1
type: EnsemblDatabaseReference

CRU2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06716130224718
p value: 0.0107135825422385
refers to: CRU2
refers to: 265094_at
t statistic: -5.19752245647149

245307_at
type: EFO_0005072
part of: A-AFFY-2

264728_at
type: EFO_0005072
part of: A-AFFY-2

AT1G56300 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.91031932785431
p value: 0.00206387023957797
refers to: AT1G56300
refers to: 256221_at
t statistic: -9.62567516360044

HAT1
type: EnsemblDatabaseReference

AT3G29320
type: EnsemblDatabaseReference

ENODL18
type: EnsemblDatabaseReference

AGL67
type: EnsemblDatabaseReference

AT1G06760
type: EnsemblDatabaseReference

AT3G11600 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.30557461374762
p value: 0.0103596980641846
refers to: 259235_at
refers to: AT3G11600
t statistic: 5.2459166534391

APP
type: EnsemblDatabaseReference

HAI3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.03363415532525
p value: 0.0210545421121273
refers to: HAI3
refers to: 266274_at
t statistic: -4.16153622697504

AT3G25260
type: EnsemblDatabaseReference

AT4G28400
type: EnsemblDatabaseReference

246253_at
type: EFO_0005072
part of: A-AFFY-2

AT3G45230
type: EnsemblDatabaseReference

252212_at
type: EFO_0005072
part of: A-AFFY-2

265203_at
type: EFO_0005072
part of: A-AFFY-2

AT4G28400 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.36603815997276
p value: 0.00744808574074605
refers to: AT4G28400
refers to: 253780_at
t statistic: -5.86350078253891

CML36
type: EnsemblDatabaseReference

ATTIM17-1
type: EnsemblDatabaseReference

266689_at
type: EFO_0005072
part of: A-AFFY-2

AIL1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.10279303688534
p value: 0.0138112314040707
refers to: 259918_at
refers to: AIL1
t statistic: 4.77608527834722

AT4G02360
type: EnsemblDatabaseReference

AT2G28400
type: EnsemblDatabaseReference

AT3G54400 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.89664145940974
p value: 0.0426222228497861
refers to: AT3G54400
refers to: 251899_at
t statistic: -5.5480759111565

AT4G15620
type: EnsemblDatabaseReference

ATEM1
type: EnsemblDatabaseReference

AT2G44310
type: EnsemblDatabaseReference

254858_at
type: EFO_0005072
part of: A-AFFY-2

266118_at
type: EFO_0005072
part of: A-AFFY-2

ATNRT1:2
type: EnsemblDatabaseReference

AT3G54400
type: EnsemblDatabaseReference

RPL3B UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03721617683562
p value: 0.0482917983210557
refers to: 265032_at
refers to: RPL3B
t statistic: 3.18315835272814

AT2G30990
type: EnsemblDatabaseReference

CALS1
type: EnsemblDatabaseReference

LGALDH DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06580533013484
p value: 0.00173961140697183
refers to: LGALDH
refers to: 253307_at
t statistic: -10.5723391539803

250634_at
type: EFO_0005072
part of: A-AFFY-2

AT3G15720 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.68135820306743
p value: 0.00839901228066795
refers to: 258252_at
refers to: AT3G15720
t statistic: 5.60887184468546

AT1G16510
type: EnsemblDatabaseReference

266462_at
type: EFO_0005072
part of: A-AFFY-2

263382_at
type: EFO_0005072
part of: A-AFFY-2

ABI4
type: EnsemblDatabaseReference

LTP2
type: EnsemblDatabaseReference

264571_at
type: EFO_0005072
part of: A-AFFY-2

PIRL8
type: EnsemblDatabaseReference

ACS2
type: EnsemblDatabaseReference

AT1G59660
type: EnsemblDatabaseReference

AT1G22060
type: EnsemblDatabaseReference

AT4G16710 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.17084831494655
p value: 0.0348507712976878
refers to: AT4G16710
refers to: 245442_at
t statistic: -3.53604133467974

ATOPT6
type: EnsemblDatabaseReference

BKI1
type: EnsemblDatabaseReference

CIL
type: EnsemblDatabaseReference

AGP21
type: EnsemblDatabaseReference

ATTSPO
type: EnsemblDatabaseReference

SUS3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08338645495123
p value: 0.00370742435841991
refers to: SUS3
refers to: 255521_at
t statistic: -7.71963313503479

LTP UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.21315764913292
p value: 0.00338806484110962
refers to: LTP
refers to: 265894_at
t statistic: 7.97334910007933

LGO
type: EnsemblDatabaseReference

AT2G46060
type: EnsemblDatabaseReference

ARPN
type: EnsemblDatabaseReference

AT-HSFC1
type: EnsemblDatabaseReference

AT1G66890
type: EnsemblDatabaseReference

AGP15
type: EnsemblDatabaseReference

AT5G42720
type: EnsemblDatabaseReference

AT5G45690
type: EnsemblDatabaseReference

LTP
type: EnsemblDatabaseReference

AT1G80440
type: EnsemblDatabaseReference

263738_at
type: EFO_0005072
part of: A-AFFY-2

AT3G11780
type: EnsemblDatabaseReference

LEA DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.48540382779733
p value: 0.00500095377397016
refers to: LEA
refers to: 263753_at
t statistic: -6.87633247238017

261305_at
type: EFO_0005072
part of: A-AFFY-2

AT3G10200 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.84159555543363
p value: 0.00300433859295874
refers to: 259142_at
refers to: AT3G10200
t statistic: -8.29268310816621

HAT3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.08514903257142
p value: 0.00370742435841991
refers to: HAT3
refers to: 251374_at
t statistic: 7.7280267794182

XF1
type: EnsemblDatabaseReference

AT1G69760
type: EnsemblDatabaseReference

AT1G31750
type: EnsemblDatabaseReference

267492_at
type: EFO_0005072
part of: A-AFFY-2

BOR1
type: EnsemblDatabaseReference

ATGA2OX2
type: EnsemblDatabaseReference

AT2G21640 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.01572174050111
p value: 0.02040795467263
refers to: AT2G21640
refers to: 263515_at
t statistic: 4.20135598409772

AFP3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.40775156904369
p value: 0.00629435346319155
refers to: AFP3
refers to: 255723_at
t statistic: -6.25825513164091

259171_at
type: EFO_0005072
part of: A-AFFY-2

252137_at
type: EFO_0005072
part of: A-AFFY-2

AT5G24460
type: EnsemblDatabaseReference

AT2G32090
type: EnsemblDatabaseReference

259314_at
type: EFO_0005072
part of: A-AFFY-2

EXGT-A1
type: EnsemblDatabaseReference

AtGolS2
type: EnsemblDatabaseReference

PLT6
type: EnsemblDatabaseReference

AT1G67920
type: EnsemblDatabaseReference

AGL67 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.69135055647072
p value: 0.00173961140697183
refers to: 262185_at
refers to: AGL67
t statistic: -10.6902522596217

ACP4 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.13595731931099
p value: 0.00173961140697183
refers to: ACP4
refers to: 254102_at
t statistic: 10.6141447032566

AT2G47680
type: EnsemblDatabaseReference

252624_at
type: EFO_0005072
part of: A-AFFY-2

259656_at
type: EFO_0005072
part of: A-AFFY-2

256576_at
type: EFO_0005072
part of: A-AFFY-2

AT3G22490
type: EnsemblDatabaseReference

AT3G17520
type: EnsemblDatabaseReference

M17
type: EnsemblDatabaseReference

AT3G15780
type: EnsemblDatabaseReference

AT4G18920
type: EnsemblDatabaseReference

AT1G03610
type: EnsemblDatabaseReference

AT1G65090
type: EnsemblDatabaseReference

RPL26B
type: EnsemblDatabaseReference

ADK
type: EnsemblDatabaseReference

261833_at
type: EFO_0005072
part of: A-AFFY-2

ASN1
type: EnsemblDatabaseReference

258240_at
type: EFO_0005072
part of: A-AFFY-2

ATBCAT-2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.54786139917613
p value: 0.00362118765017407
refers to: ATBCAT-2
refers to: 264524_at
t statistic: -7.82389535050161

AT5G05320
type: EnsemblDatabaseReference

AT1G55760
type: EnsemblDatabaseReference

AT1G23070
type: EnsemblDatabaseReference

ATTI2
type: EnsemblDatabaseReference

E12A11
type: EnsemblDatabaseReference

ZW9 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.34084746791592
p value: 0.0316953976755898
refers to: ZW9
refers to: 256021_at
t statistic: -6.56244199040539

263352_at
type: EFO_0005072
part of: A-AFFY-2

258140_at
type: EFO_0005072
part of: A-AFFY-2

260272_at
type: EFO_0005072
part of: A-AFFY-2

RD21 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.56347631404914
p value: 0.0075076523500313
refers to: 245803_at
refers to: RD21
t statistic: 5.83507891043409

RGA1
type: EnsemblDatabaseReference

CMTA4
type: EnsemblDatabaseReference

259184_at
type: EFO_0005072
part of: A-AFFY-2

AFP3
type: EnsemblDatabaseReference

KCS20
type: EnsemblDatabaseReference

257536_at
type: EFO_0005072
part of: A-AFFY-2

AT1G31660
type: EnsemblDatabaseReference

RPL22A UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.2605817133195
p value: 0.0107537283436662
refers to: 262132_at
refers to: RPL22A
t statistic: 5.18643764166023

AT1G23040
type: EnsemblDatabaseReference

AT1G72800 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.50325570473545
p value: 0.00222497875680134
refers to: AT1G72800
refers to: 259864_at
t statistic: 9.25831970927904

UGT73B5
type: EnsemblDatabaseReference

AT1G25275
type: EnsemblDatabaseReference

PIL2
type: EnsemblDatabaseReference

APP UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.63761726979423
p value: 0.0210548207408157
refers to: APP
refers to: 255500_at
t statistic: 4.16088214287893

KCS20 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.58845728351189
p value: 0.0095472486528071
refers to: KCS20
refers to: 249123_at
t statistic: 5.38019677982121

COX1
type: EnsemblDatabaseReference

248100_at
type: EFO_0005072
part of: A-AFFY-2

SVB
type: EnsemblDatabaseReference

AT4G31320
type: EnsemblDatabaseReference

254356_at
type: EFO_0005072
part of: A-AFFY-2

AT4G29020 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.376466094918
p value: 0.0235951365086443
refers to: AT4G29020
refers to: 253754_at
t statistic: -7.38990852217984

257880_at
type: EFO_0005072
part of: A-AFFY-2

253754_at
type: EFO_0005072
part of: A-AFFY-2

Hop1
type: EnsemblDatabaseReference

MDR4
type: EnsemblDatabaseReference

CAT3
type: EnsemblDatabaseReference

AT3G10930 UP in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.40316692856465
p value: 0.0299573805663715
refers to: AT3G10930
refers to: 256442_at
t statistic: 6.68661613358116

262548_at
type: EFO_0005072
part of: A-AFFY-2

ATMES10
type: EnsemblDatabaseReference

PETC
type: EnsemblDatabaseReference

245362_at
type: EFO_0005072
part of: A-AFFY-2

NPC3
type: EnsemblDatabaseReference

AT2G33830 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.48842126923043
p value: 0.00187406734154602
refers to: AT2G33830
refers to: 267461_at
t statistic: -10.1564025032945

AT1G16850
type: EnsemblDatabaseReference

ENODL15
type: EnsemblDatabaseReference

265501_at
type: EFO_0005072
part of: A-AFFY-2

AT2G03280
type: EnsemblDatabaseReference

MPK9
type: EnsemblDatabaseReference

253382_at
type: EFO_0005072
part of: A-AFFY-2

SHL1
type: EnsemblDatabaseReference

THH1
type: EnsemblDatabaseReference

ATST2B
type: EnsemblDatabaseReference

R1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.08726603425737
p value: 0.00570833557238263
refers to: R1
refers to: 263882_at
t statistic: 6.51414337570766

RD21
type: EnsemblDatabaseReference

265084_at
type: EFO_0005072
part of: A-AFFY-2

AT4G25780
type: EnsemblDatabaseReference

245233_at
type: EFO_0005072
part of: A-AFFY-2

AT2G40475
type: EnsemblDatabaseReference

ATASE2
type: EnsemblDatabaseReference

AT1G17430
type: EnsemblDatabaseReference

ATSMO2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.16699325606443
p value: 0.0071494635243668
refers to: ATSMO2
refers to: 261076_at
t statistic: -5.95300287362471

ACD32.1
type: EnsemblDatabaseReference

AT1G72940
type: EnsemblDatabaseReference

ILL6
type: EnsemblDatabaseReference

AT3G61900
type: EnsemblDatabaseReference

BKI1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.08753555327548
p value: 0.00409829093934162
refers to: 249190_at
refers to: BKI1
t statistic: 7.41059795358269

AT2G30620 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.10643166065778
p value: 0.00460896386156689
refers to: 267492_at
refers to: AT2G30620
t statistic: -7.04851214651902

PIN1
type: EnsemblDatabaseReference

SVB UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.48438077400306
p value: 0.014798166036717
refers to: 245629_at
refers to: SVB
t statistic: 4.66409845804173

AT3G63160
type: EnsemblDatabaseReference

Y-2
type: EnsemblDatabaseReference

AT4G01410
type: EnsemblDatabaseReference

NSP2
type: EnsemblDatabaseReference

AT1G07040
type: EnsemblDatabaseReference

CHR34
type: EnsemblDatabaseReference

260156_at
type: EFO_0005072
part of: A-AFFY-2

ATAF1
type: EnsemblDatabaseReference

AT1G22060 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.06602420715939
p value: 0.0152673294490813
refers to: AT1G22060
refers to: 255948_at
t statistic: -4.6081515144686

CML36 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.01037074484003
p value: 0.0118661277642089
refers to: CML36
refers to: 259143_at
t statistic: -5.02522888808367

AT2G24040 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.24200979834768
p value: 0.0159797383255248
refers to: 266566_at
refers to: AT2G24040
t statistic: 4.54768657162521

AT3G57030
type: EnsemblDatabaseReference

HCAR
type: EnsemblDatabaseReference

264867_at
type: EFO_0005072
part of: A-AFFY-2

GMI1
type: EnsemblDatabaseReference

248968_at
type: EFO_0005072
part of: A-AFFY-2

PHO1
type: EnsemblDatabaseReference

HMT3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.14981158371338
p value: 0.00182095596064027
refers to: HMT3
refers to: 258322_at
t statistic: -10.2853369280622

260498_at
type: EFO_0005072
part of: A-AFFY-2

TCH2 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.4496572736954
p value: 0.0124593860733898
refers to: TCH2
refers to: 249583_at
t statistic: 4.94523501205464

IDH-VI
type: EnsemblDatabaseReference

AT5G58160
type: EnsemblDatabaseReference

AT2G30620
type: EnsemblDatabaseReference

AT1G08170
type: EnsemblDatabaseReference

SEP2
type: EnsemblDatabaseReference

COL3 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27448561162312
p value: 0.00657025047891852
refers to: COL3
refers to: 263537_at
t statistic: 6.13522967900549

CBSX5
type: EnsemblDatabaseReference

CIPK9
type: EnsemblDatabaseReference

AT3G19660
type: EnsemblDatabaseReference

AT2G33520
type: EnsemblDatabaseReference

AGK2
type: EnsemblDatabaseReference

ATNADP-ME1
type: EnsemblDatabaseReference

CPK30 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21623739835957
p value: 0.00392836225346282
refers to: 262220_at
refers to: CPK30
t statistic: -7.52424152996315

Y-2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.07294388958504
p value: 0.0259799780964972
refers to: 257154_at
refers to: Y-2
t statistic: -3.88176868176407

261558_at
type: EFO_0005072
part of: A-AFFY-2

258652_at
type: EFO_0005072
part of: A-AFFY-2

AT4G19390
type: EnsemblDatabaseReference

SRF8 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.05974320153254
p value: 0.0308784313684015
refers to: SRF8
refers to: 254341_at
t statistic: -3.68058801417874

AtSIP2
type: EnsemblDatabaseReference

260414_at
type: EFO_0005072
part of: A-AFFY-2

UP6
type: EnsemblDatabaseReference

ATGSTU8
type: EnsemblDatabaseReference

AT5G54000
type: EnsemblDatabaseReference

AT1G78170
type: EnsemblDatabaseReference

249214_at
type: EFO_0005072
part of: A-AFFY-2

B5 #6
type: EnsemblDatabaseReference

AT2G38820 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.21553347497493
p value: 0.00173961140697183
refers to: AT2G38820
refers to: 263265_at
t statistic: -10.7031275124496

ATMYC2
type: EnsemblDatabaseReference

PARP3 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.73442300790185
p value: 0.0086680782164385
refers to: PARP3
refers to: 249937_at
t statistic: -5.54906607301327

AT4G12070 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2430712499664
p value: 0.021538452770761
refers to: AT4G12070
refers to: 254858_at
t statistic: -4.1315204251106

UGT76F1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.03088631889771
p value: 0.0369979793528684
refers to: UGT76F1
refers to: 251761_at
t statistic: 3.47026245611083

AT1G48870
type: EnsemblDatabaseReference

AT1G14960
type: EnsemblDatabaseReference

251246_at
type: EFO_0005072
part of: A-AFFY-2

AT3G16150
type: EnsemblDatabaseReference

NAP
type: EnsemblDatabaseReference

AFP2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.15658036083057
p value: 0.0136165231036348
refers to: AFP2
refers to: 256069_at
t statistic: -4.7975296358931

anac053 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.07134676638667
p value: 0.00959019647163068
refers to: anac053
refers to: 258921_at
t statistic: 5.37282453822204

SGR2
type: EnsemblDatabaseReference

AT4G34630 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.14674482617772
p value: 0.0106830803203757
refers to: 253228_at
refers to: AT4G34630
t statistic: 5.20290544132618

AT2G42750 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.04783302688772
p value: 0.00194108865771302
refers to: AT2G42750
refers to: 263985_at
t statistic: -9.95895372788229

AT1G17860
type: EnsemblDatabaseReference

CYP96A11
type: EnsemblDatabaseReference

AT3G54000 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.09781792534513
p value: 0.0224295325530915
refers to: AT3G54000
refers to: 251925_at
t statistic: 4.07691406909418

FBL14 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.63526956719993
p value: 0.00319440461034699
refers to: FBL14
refers to: 260272_at
t statistic: -8.10922137361077

(Assay) Col-0, dark, biological rep3
type: Assay
identifier: Col-0, dark, biological rep3
has participant: A-AFFY-2

ATPGP1
type: EnsemblDatabaseReference

AT4G26790
type: EnsemblDatabaseReference

ELP
type: EnsemblDatabaseReference

ALPHA-VPE
type: EnsemblDatabaseReference

AT1G17830
type: EnsemblDatabaseReference

258078_at
type: EFO_0005072
part of: A-AFFY-2

(Factor value) GROWTH_CONDITION/far-red/red light
type: EFO_0000001
property type: GROWTH_CONDITION
property value: far-red/red light

AT2G40435 DOWN in 'pil5-1' vs 'wild type' in 'far-red/red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.45667595647531
p value: 0.0346746852604836
refers to: AT2G40435
refers to: 263829_at
t statistic: -6.22868451772353

ATPME3
type: EnsemblDatabaseReference

ATG1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.26901468430537
p value: 0.00840602093637063
refers to: 246309_at
refers to: ATG1
t statistic: 5.60290874591327

AT1G11410
type: EnsemblDatabaseReference

AT3G58200 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.75168195094164
p value: 0.00674277720305406
refers to: 251576_at
refers to: AT3G58200
t statistic: -6.06174182024194

259095_at
type: EFO_0005072
part of: A-AFFY-2

AT3G45230 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.01509084444609
p value: 0.0104352362757021
refers to: AT3G45230
refers to: 252615_at
t statistic: 5.23606084576936

BETA-TIP DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.70374759542791
p value: 0.00109248354569113
refers to: BETA-TIP
refers to: 255905_at
t statistic: -13.2274111242902

AT4G35720
type: EnsemblDatabaseReference

253252_at
type: EFO_0005072
part of: A-AFFY-2

AT4G33980
type: EnsemblDatabaseReference

AT3G25870
type: EnsemblDatabaseReference

AT1G56300
type: EnsemblDatabaseReference

AT1G78100 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.0551441245248
p value: 0.0135423912396814
refers to: AT1G78100
refers to: 260058_at
t statistic: 4.80922858858923

ATEXPA10 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 2.09259010165
p value: 0.00173961140697183
refers to: 261266_at
refers to: ATEXPA10
t statistic: 10.6509706009037

D-CDES DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.08313355939551
p value: 0.0348555582164443
refers to: D-CDES
refers to: 262247_at
t statistic: -3.53544577650596

AT2G19810
type: EnsemblDatabaseReference

AT1G10050
type: EnsemblDatabaseReference

247436_at
type: EFO_0005072
part of: A-AFFY-2

TCH2
type: EnsemblDatabaseReference

AT3G11930
type: EnsemblDatabaseReference

AT4G18650
type: EnsemblDatabaseReference

AT3G19360 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.27907281273947
p value: 0.00370742435841991
refers to: AT3G19360
refers to: 258024_at
t statistic: 7.72530801004688

264352_at
type: EFO_0005072
part of: A-AFFY-2

BT2 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.2294267367772
p value: 0.0165917289738497
refers to: BT2
refers to: 252367_at
t statistic: -4.49187975408583

266143_at
type: EFO_0005072
part of: A-AFFY-2

ASN1 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.0221452955469
p value: 0.00571279888553537
refers to: ASN1
refers to: 252415_at
t statistic: -6.50467332054681

RRA2
type: EnsemblDatabaseReference

AT3G55690
type: EnsemblDatabaseReference

258293_at
type: EFO_0005072
part of: A-AFFY-2

ATBS1
type: EnsemblDatabaseReference

RAP2.4
type: EnsemblDatabaseReference

264252_at
type: EFO_0005072
part of: A-AFFY-2

267158_at
type: EFO_0005072
part of: A-AFFY-2

250657_at
type: EFO_0005072
part of: A-AFFY-2

260570_at
type: EFO_0005072
part of: A-AFFY-2

AT1G19540
type: EnsemblDatabaseReference

AT1G56190 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -1.12897818557373
p value: 0.00121088081485625
refers to: AT1G56190
refers to: 256228_at
t statistic: -12.7516161651511

AT3G49790 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.60820350609083
p value: 0.00296274868198379
refers to: AT3G49790
refers to: 252250_at
t statistic: 8.35435631283544

AT4G01410 DOWN in 'pil5-1' vs 'wild type' in 'far-red light'
type: DecreasedDifferentialExpressionRatio
fold change: -2.7159759673614
p value: 0.00483701962476198
refers to: AT4G01410
refers to: 255577_at
t statistic: -6.94138851604109

ACHT4
type: EnsemblDatabaseReference

ATSAR1
type: EnsemblDatabaseReference

248940_at
type: EFO_0005072
part of: A-AFFY-2

scpl25 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.17549145395536
p value: 0.0149751985314309
refers to: scpl25
refers to: 258857_at
t statistic: 4.6399929157593

HAT1
type: EnsemblDatabaseReference

ATFD1 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.15382276800746
p value: 0.0158433357180519
refers to: ATFD1
refers to: 260481_at
t statistic: 4.55859440337492

AT3G29320
type: EnsemblDatabaseReference

266601_at
type: EFO_0005072
part of: A-AFFY-2

AT1G70000 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.51182720044852
p value: 8.5198853844606E-4
refers to: 264692_at
refers to: AT1G70000
t statistic: 14.6094779483194

ENODL18
type: EnsemblDatabaseReference

250972_at
type: EFO_0005072
part of: A-AFFY-2

AT3G25260
type: EnsemblDatabaseReference

AT4G28400
type: EnsemblDatabaseReference

AT3G45230
type: EnsemblDatabaseReference

ATEXPA10
type: EnsemblDatabaseReference

ACP1
type: EnsemblDatabaseReference

ECT6 UP in 'pil5-1' vs 'wild type' in 'far-red light'
type: IncreasedDifferentialExpressionRatio
fold change: 1.04679888354046
p value: 0.005857854812795
refers to: ECT6
refers to: 258460_at
t statistic: 6.43263642258601

256416_at
type: EFO_0005072
part of: A-AFFY-2

ATMGL
type: EnsemblDatabaseReference

PAP85
type: EnsemblDatabaseReference