Gbp2 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Clic4 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ifit2 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Cxcl2 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ppa1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Samhd1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Gmppb UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ifih1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Trim21 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Cd14 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Polr2g UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Defb1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ifnb1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Irf9 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Phlda1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Pdcd4 DOWN in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Atf3 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Znfx1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Piga UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Apobec1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Igtp UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ifit1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Rsad2 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Gbp3 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ppp1r15a UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Sp100 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ifi47 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Vnn3 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Trafd1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ifitm3 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Cxcl10 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Dnajb11 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Analysis of 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ch25h UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Nfkbia UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
B2m UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
AU020206 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Vnn1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Irgm2 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ifi203 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
H2-D1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Mx2 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Isg20 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Areg UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ddit3 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Acaa2 DOWN in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Mx1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Gyk UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Irf7 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Arg1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Crct1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Mpeg1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Rrbp1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Irg1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Tnfrsf1b UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
H2-K1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Tap1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Cxcl1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ccl5 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Iigp1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Casp4 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Cbr1 DOWN in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ccrl2 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
AW112010 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Cmpk2 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ifi204 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Tapbp UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Cxcl5 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Oligonucleotide microarrays were used to establish a profile for gene expression in wild-type airway epithelial cells after paramyxoviral infection. Analysis was performed on mRNA isolated from SeV-infected primary-culture mouse tracheal epithelial cells that were maintained under physiologic conditions (air-liquid interface). Experiment Overall Design: Primary-culture mouse tracheal epithelial cells (mTECs) were established on Transwell membranes using air-liquid interface (ALI) conditions. Sendai virus (SeV), strain 52, was obtained from American Type Culture Collection and stored at -70ÃÂÃÂ°C. Cultures were inoculated with SeV or an equivalent amount of UV-inactivated SeV (SeV-UV) in the apical compartment for 1 h at 37 ÃÂÃÂ°C. Air-liquid-interface conditions were re-established by washing the membrane with PBS. Each culture well was subjected to one of two treatments (SeV, or UV-SeV) for 1 day. N = 4 SeV wells, N = 6 UV-SeV wells, with each well independently analyzed by microarray. No technical replicates were performed, but arrays were evaluated for quality control using the SimpleAffy package (Miller CJ, 2004) in Bioconductor 2.0.
(Factor value) INFECT/Sendai virus infected
Icam1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Plat UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Cebpd UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Klf4 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ifi202b UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Usp18 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Igfbp5 DOWN in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
(Factor value) INFECT/UV-inactivated Sendai virus infected
Lcn2 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Sprr1a UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Stat1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ctss UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Plscr2 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Osmr UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Slfn2 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Irgm1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Psmb8 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Rasd1 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Creld2 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'
Ifi35 UP in 'Sendai virus infected' vs 'UV-inactivated Sendai virus infected'