Integbio Database Catalog
Integbioデータベースカタログ
Japan Science and Technology Agency National Bioscience Database Center
独立行政法人科学技術振興機構 バイオサイエンスデータベースセンター
生物種
organism
対象
target
データの種類
Information type
in preparation
Active
その他
Others
いずれのカテゴリも該当しない
Not under any categories
論文/その他報告書/書誌
Journal article/Report/Bibliography
論文のレポジトリ、解説書、調査報告、プロトコル、もしくは書誌情報
- Article repositories, protocols, manuals and reports of survey - Bibliographic databases
3DinSight
Inactive
Kyushu Institute of Technology
蛋白質
Protein
蛋白質の配列、構造、属性、及び機能を対象
Sequences, structures, properties and functions of proteins
構造
Structure
生体分子/生理活性物質の化学構造及び３次元構造
Chemical and three-dimensional structures of biological and biologically active molecules
5'SAGE
5'-end serial analysis of gene expression database
The University of Tokyo Graduate School of Frontier Sciences
タグ配列 (核酸)
Tag sequence (nucleic acid)
EST、STS、SAGEなどのタグ配列/ライブラリーを対象
Sequences and libraries for tag sequences (EST, STS, SAGE, etc.)
遺伝子発現
Gene Expression
細胞、組織、及び個体における遺伝子発現の局在やレベル
Localization and levels of gene expression in cells, tissues and whole organisms
配列
Sequence
核酸配列及びアミノ酸配列
Amino acid and nucleotide sequence data
AAindex
Amino acid indices, substitution matrices and pair-wise contact potentials
Kyoto University Institute for Chemical Research Bioinformatics Center
Animal Search System
RIKEN
遺伝子
Gene
遺伝子の配列、属性、及び機能を対象
Sequences, properties and functions of genes
個体/種
Organism
個体/生物種の特徴や属性を対象
Features and properties of species/individuals of organisms
健康/疾患
Health/Disease
ヒト疾患表現型、疫学、疾患の遺伝学的知見、もしくはヒト疾患モデル動物の情報、もしくは健康科学や栄養学に関する知見を対象
Disease phenotypes and epidemiology, the genetic basis of disease and animal models of human disease Information about health and nutrition
画像/動画
Image/Movie
研究や教育のための画像/動画
Visual materials of research or educational value
バイオリソース
Bioresource
DNAクローン、細胞及び生物個体のバイオリソースやそれらの提供機関
Bioresources and stock centers for DNA clones, cells and whole organisms
Arch GeNet
Archaeal Gene Network
National Institute of Advanced Industrial Science and Technology
cDNA
cDNA配列/ライブラリーを対象
cDNA sequences and libraries
相互作用/パスウェイ
Interaction/Pathway
分子及び細胞間の物理的相互作用や遺伝子相互作用、もしくは細胞内における一連の化学反応
- The physical or genetic interactions between molecules - A series of chemical reactions occuring within a cell
ARCHAIC
Archaebacterial Information Collection
ゲノム
Genome
ゲノムの全配列や構造を対象
Whole genome sequences or structures
ArkDB
The Roslin Institute(University of Edinburgh)
多型
Polymorphism
SNPなどの多型を対象
Genetic variations (SNP, etc.)
ArrayExpress
ArrayExpress Archive
European Bioinformatics Institute
RNA
RNAの配列、構造、属性、及び機能を対象
Sequences, structures, properties and functions of RNA
その他の生体分子
Other biomolecule
DNA、RNA、蛋白質、酵素を除く生体分子の属性及び機能を対象
Structures, properties and functions of biomolecules that do not fall under the categories of DNA, RNA, Protein or Enzyme (including glycan-related molecules, lipids and secondary metabolites)
ARTADE
ARabidopsis Tiling-Array-based Detection of Exons
Aspergillus oryzae EST DataBase
National Research Institute of Brewing
Atlas of Genetics and Cytogenetics in Oncology and Haematology
ATLAS
細胞
Cell
細胞の構造、属性、及び機能を対象
Structures, properties and functions of cells
BARLAY DB
Research Organization of Information and Systems National Institute of Genetics
BDGP
Berkeley Drosophila Genome Project
The Berkeley Drosophila Genome Project
その他のDNA
Other DNA
上記に該当しないDNAの配列、構造、属性、及び機能を対象
Structures, properties and functions of DNA, which do not fall under any categories above
Biomolecules Gallery
BioTermNet
The University of Tokyo The Institute of Medical Science Human Genome Center
オントロジー/用語/学名/命名法
Ontology/Terminology/Nomenclature
統制語彙及びオントロジーの開発や維持、もしくは分子や生物種の命名法及び目録
- The development and management of controlled vocabularies and ontologies - Nomenclatures of processes, molecules and organisms
Photographs of mutants in Bombyx mori
The University of Tokyo
Brain Atlas Database of Japanese Monkey for WWW.
The Comprehensive Enzyme Information System (BRENDA)
Technische Universitat Braunschweig
酵素
Enzyme
RNA、蛋白質のうち触媒活性をもつ分子を対象
As for "Protein" and "RNA", but with a focus on catalytic molecules
BSORF
Bacillus subtilis Genome Database
Cancer Chromosomes
National Center for Biotechnology Information
CARD R-BASE
Center for Animal Resources and Development Database
Kumamoto University Institute of Resource Development and Analysis
CCDS
Consensus CDS
CGED
Cancer Gene Expression Database
Research Organization of Information and Systems Database Center for Life Science
CGH Data Base
Comparative Genomic Hybridization Database
Tokyo Medical and Dental University Medical Research Institute
ChEBI
Chemical Entities of Biological Interest
薬剤/化学物質
Drug/Chemical
薬剤や低分子化合物などの化学物質を対象
Information about chemicals such as drugs and low-molecular-weight compounds
Chlamydomonas reinhardtii EST index
Kazusa DNA Research Institute
CIBEX
Center for Information Biology gene Expression database
Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems
CluSTr
Clusters of SWISS-PROT and TrEMBL proteins database
系統発生/分類
Phylogeny/Classification
分子もしくは生物種間の進化学的関係や分類
Evolutionary relationships and classifications of molecules and organisms
CORG
Comparative Regulatory Genomics
Max-Planck-Institut fur Entwicklungsbiologie
CSA
Catalytic Site Atlas
CUTG
Codon Usage Database
CyanoBase
Genome database for Cyanobacteria
CYORF
Cyanobacteria Gene Annotation Database
D-HaploDB
Definitive Haplotype Database
Kyushu University Medical Institute of Bioregulation
Database of Genomic Variants
A curated catalogue of structural variation in the human genome
The Centre for Applied Genomics
Database of the RNAi phenotypes for the 168 genes analyzed
PRINTS
The university of Manchester
DBGET Search
dbProP
a Protein Polymorphism database
National Institute of Radiological Sciences
dbQSNP
SNPs in the transcriptional promoter regions in human
DBTBS
A database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information
DBTGR
Database of Tunicate Gene Regulation
DBTSS
Database of Transcriptional Start Sites
DDBJ
DNA Data Bank of Japan
DeinoBase
Deinococci Genome Database
Japan Atomic Energy Agency
DGRC
Drosophila Genetic Resource Center
Kyoto Institute of Technology Drosophila Genetic Resource Center
DIP
Database of Interacting Proteins
University of California
DOGAN
a genome database of microorganisms sequenced at NITE
National Institute of Technology and Evaluation
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240
Staphylococcus aureus subsp. aureus N315
eF-site
electrostatic surface of Functional-site
Osaka University Institute for Protein Research
EGTC
Database for the Exchangeable Gene Trap Clones
EMBL-Bank
EMBL Nucleotide Sequence Database
Ensembl
Wellcome Trust Sanger Institute
ENTREZ, Life Sciences Search Engine
ENU Mutants (A large Scale Mutagenesis Project in Riken GSC)
RIKEN Tsukuba Institute
eProtS
Encyclopedia of Protein Structures
Escherichia coli O157:H7 Sakai
Tokyo Institute of Technology Graduate School of Bioscience and Biotechnology
ECGB
Eukaryotic Comparative Genome Browser
Closed
Japan Science and Technology Agency
Extremobase
Japan Agency for Marine-Earth Science and Technology
EzCatDB
A Database of Enzyme Catalytic Mechanisms
FAMSBASE
Full Automatic Modeling System database
Nagahama Institute of Bio-Science and Technology
FlyBase
FlyBase (A Database of Drosophila Genes & Genomes)
Genetics Society of America
FlyView (A Drosophila Image Database)
University of Munster
Full Length cDNA
The University of Tokyo The Institute of Medical Science
Full-Malaria
Malaria Full-Length cDNA Database (Plasmodium falciparum)
Full-Toxoplasma
Toxoplasma Full-Length cDNA Database
GBIF
Global Biodiversity Information Facility free and open access to biodiversity data
GBIF Secretariat
GDBS
Gene Diversity DataBase System
GeMDBJ
Genome Medicine Database of Japan
National Institute of Biomedical Innovation
GENA
Gene Name Dictionary
Gene - NCBI
Gene Ontology
The GO Consortium
GeneAnnot
Microarray Gene Annotation
Weizmann Institute of Science/Department of Biological
GENIES
Gene Network Inference Engine based on Supervised Analysis
GenoBase
Integrated database of E.coli K-12 (W3110)
Escherichia coli str. K-12 substr. MG1655
Escherichia coli str. K-12 substr. W3110
Genome Project of Streptomyces avermitilis
Kitasato University Kitasato Institute for Life Sciences
GON
Genomic Object Net Pathway Database
Yamaguchi University Faculty of Science
GEO
Gene Expression Omnibus
GermOnline
Universite de Rennes
Ghost Database
Ciona intestinalis genomic and cDNA resources
Kyoto University Graduate School of Science
GIB
Genome Information Broker
GiiB-JST mtSNP
Human Mitochondrial Genome Polymorphism Database
Gifu International Institute of Biotechnology
GLIDA
GPCR-Ligand Database
Kyoto University Graduate School of Pharmaceutical Sciences
Globin Gene Server
Pennsylvania State University
GlycoEpitope
Ritsumeikan University
GrainGenes
A Database for Triticeae and Avena
Agricultural Research Service of the US Department of Agriculture
GTOP
Genomes TO Protein structures and functions
GTOP (Rice version)
National Institute of Agrobiological Sciences
H-ANGEL
The Human Anatomical Gene Expression Library
H-InvDB
H-Invitational Database
HarvEST
Hepatitis Virus Database
Het-PDB Navi
A navigator of small molecules in Protein Data Bank which is called heterogen atoms or in short hetatoms
HGMD
The Human Gene Mutation Database
Institute of Medical Genetics in Cardiff
HINTdb
Homologous Interactions Database
HIV DATABASES
Los Alamos National Secutiry, LLC
HomoloGene
HOWDY
Human Organized Whole genome Database
HPRD
Human Protein Reference Database
Institute of Bioinformatics
HUGE
A Database of Human Unidentified Gene-Encoded Large Proteins Analyzed by Kazusa Human cDNA Project
IMGT
IMGT®, the international ImMunoGeneTics information system®
CNRS (The National Center for Scientific Research)
Montpellier University, Montpellier
IMGT/HLA Database
INOH Pathway Database
Integrating Network Objects with Hierarchies Pathway Database
InterPro
Integrated documentation resource for protein families, domains and functional sites
iProClass
Integrated Protein Knowledgebase
Georgetown University Medical Center
J*FLY
data depository for Drosophila researchers
The University of Tokyo Institute of Molecular and Cellular Biosciences
JDD
Japan Drosophila Database
JG-SNP
A Database of Japanese Single Nucleotide Polymorphism for Geriatric Research
Tokyo Metropolitan Geriatric Hospital and Institute of Gerontology
調査中
Under survey
サイトが休止や運用を終了しているなどの理由からカテゴリの選択が難しい
Difficult to assign categories for reasons such as website closures
JMSR
Japan Mouse/Rat Strain Resources Database
JSNP
Japanese Single Nucleotide Polymorphisms
KEGG BRITE
Functional hierarchies and binary relationships of biological entities
KEGG EXPRESSION Database
KEGG LIGAND Database
Molecular building blocks of life in the chemical space
KEGG PATHWAY Database
Wiring diagrams of molecular interactions, reactions, and relations
KEGG SSDB Database
Sequence Similarity Database (Orthologs/paralogs, conserved gene clusters, and sequence motifs)
KOME
Knowledge-Oriented Molecular Biological Encyclopedia
KONCHU
Kyushu University Faculty of Agriculture
KONCHUR
NBRP Legume Base
University of Miyazaki Frontier Science Research Center
LinkDB Search
LipidBank
The Japanese Conference on the Biochemistry of Lipids
LSD
LIFE SCIENCE DICTIONARY PROJECT
MAGEST
MAboya ( the ascidian, Halocynthia roretzi ) Gene Expression patterns and Sequence Tags
MaizeGDB
Maize Genetics and Genomics Database
MaizeGDB TEAM
MBGD
Microbial Genome Database for Comparative Analysis
National Institute for Basic Biology
MEPD
Medaka Expression Pattern Database
The European Molecular Biology Laboratory
MeSH
Medical Subject Headings
MG Workbench
Microbial Genome Workbench
MGC
Mammalian Gene Collection
MGI
Mouse Genome Informatics
The Jackson Laboratory
miRBase
microRNA database
Faculty of Life Sciences(The University of Manchester)
MitoFish
Mitochondrial Genome Database of Fish
The University of Tokyo Atmosphere and Ocean Research Institute
miyakogusa.jp
MMDBJ
Mouse Microsatellite Data Base of Japan
MOKUROKU
Kyushu University
National BioResource Project Morning glory
MRCD
Microbial Resources and Chemotaxomy Database
Mycoplasma penetrans Genome
National Institute of Infectious Diseases
NBRC Culture Catalogue Search
National BioResource Project Chrysanthemum
NBRP E.coli Strain
NBRP Medaka
Oryzabase
KOMUGI
NDB
Nucleic Acid Database
The State University of New Jersey
NRSub
Non-Redundant B.subtilis database
Pole Bio-Informatique Lyonnais
ODB
Operon DataBase
Niigata University Graduate School of Medical and Dental Sciences
OMIA
Online Mendelian Inheritance in Animals
OMIM
Online Mendelian Inheritance in Man
National Bioresource Project "Pathogenic microbes"
PDB
Protein Data Bank
Research Collaboratory for Structural Bioinformatics
PDBj
Protein Data Bank Japan
PDBSTR
PEC
Profiling of Escherichia coli chromosome
PEDANT3 database
a Protein Extraction, Description and Analysis Tool
German Research Center for Environmental Health
PEDE
Pig Expression Data Explorer
PEPTIDOME
National Cardiovascular Center Research Institute
Pfam
PharmGKB
Pharmacogenomics Knowledge Base
Stanford University
PHYSCObase
Physcomitrella patens Full-Length cDNA Clone Database Search
PIR
Protein Information Resource
PLACE
A Database of Plant Cis-acting Regulatory DNA Elements
Plant snoRNA Database
Scotthish Corp Research Institute
PMD
Protein Mutant Database
Polymorphism of Microsatellite Markers
PRF
Protein Research Foundation
Probe
ProDom
Rhone-Alpes Bioinformatics Center
ProMode
Waseda University
ProNIT
Thermodynamic Database for Protein-Nucleic Acid Interactions
ProTherm
Thermodynamic Database for Protein and Mutants
Pseudogene.org
Yale University
PubMed
QFbase
Macaca fascicularis cDNA database
RAD
Rice Annotation Database
RAP-DB
Rice Annotation Project DataBase
RARGE
RIKEN Arabidopsis + Genome Encyclopedia
RIKEN Yokohama Institute
RDP
The Ribosomal Database Project
Michigan State University
REACTOME
Reactome team
READ
Riken Expression Array Database
RefSeq
Reference Sequence
RGD
The Rat Genome Database
Medical College of Wisconsin/Bioinformatics Research Center
RhizoBase
Genome database for Rhizobia with annotation
Rice Proteome Database
RIKEN Arabidopsis Full-Length Clone Database Search
RMG
Rice Mitochondrial Genome
RMOS
Rice Microarray Opening Site
RPG
Ribosomal Protein Gene Database
SASSC Quick search
The Sendai Arabidopsis Seed Stock Center
RiceGAAS
Rice Genome Automated Annotation System
SBM DB
Systems Biology and Medicine Database
The University of Tokyo Research Center for Advanced Science and Technology
SCMD
Saccharomyces cerevisiae Morphological Database
SCOP
Structural Classification of Proteins
The Medical Research Council (MRC) Laboratory of Molecular Biology
SGD
Sugi Genome Database
Forestry and Forest Products Research Institute
Saccharomyces Genome Database
SilkBase
EST analysis of silkworm gene expression
Silkworm Base
Silkworm Genetic Resource Database
Silver Project: Ape Genome Sequencing
dbSNP
The Single Nucleotide Polymorphism Database (dbSNP)
SPAD
Signaling Pathway Database
Kyushu University Graduate School of Bioresource and Bioenvironmental Sciences
Species 2000
University of Reading
The NAISTrap Project
Nara Institute of Science and Technology Graduate School of Biological Sciences
NBRP-Rat
The National BioResource Project for the Rat in Japan
Institute of Laboratory Animals, Graduate School of Medicine, Kyoto University
TMIG-2DPAGE Database
Tobacco EST clones from BY-2 cells Database Search
TP-Search
The University of Tokyo Graduate School of Pharmaceutical Sciences
Transcriptome analysis of 2 component system in Eschericia coli
Nara Institute of Science and Technology
TranspoGene
The influence of Transposed Elements (TEs) on the transcriptome of 7 species
Tel Aviv University
Transposon tag line Database Search
TraP
Transcription Product Database
TRSIG
Database on Translational Signals
UCSC Genome Bioinformatics
University of California, Santa Cruz
UniGene
UniProt
The Universal Protein Resource
UniProt Consortium
UniSTS
UTGB Medaka Genome Browser
University of Tokyo Genome Browser
V. parahaemolyticus Genome Information
XDB
Xenopus laevis Database
Yeast
National BioResource Project - Yeast
Osaka City University Graduate School of Medicine
Bombyx mori EST Sequences in Full-length cDNA Libraries
The University of Tokyo Graduate School of Agricultural and Life Sciences
Mutant Panel
Rice Tos17 Insertion Mutant Database
GETDB
Gal4 Enhancer Trap Insertion Database
TABR
Tropical bee reference database
Soybean Proteome Database
National Agriculture and Food Research Organization,National Institute of Crop Science
ETHMEDmmm
The Data Base of Ethno-medicines in the world
University of Toyama Institute of Natural Medicine
PROSITE
Database of protein domains, families and functional sites
Swiss Institute of Bioinformatics
GeneCards
Weizmann Institute of Science
Epigenomics
dbVar
Database of Genomic Structural Variation
Plasma Proteome Database
Johns Hopkins University
Amphibian Species of the World
American Museum of Natural History
Ano Base
The Anopheles Database
Institute of Molecular Biology and Biotechnology (IMBB)
Avibase
The World Bird Database
Bird Studies Canada
BOLD
Barcode of Life Data Systems
The Consortium for the Barcode of Life (CBOL)
Bio-Resourse Network
BioCyc
SRI International
Blocks
Fred Hutchinson Cancer Research Center
CAGE Basic Viewer
CarpeDB
A Comprehensive Database on the Genetics of Epilepsy
The University of Alabama
CGAP
The Cancer Genome Anatomy Project
Codon Table
Conserved Domains and Protein Classification
CREB Target Gene Database
Salk Institute
DGVa
Database of Genomic Variants Archive
Disease Ontology Wiki
Center for Genetic Medicine
EcoCyc
EGO
Eukaryotic Gene Orthologues
Dana-Farber Cancer Institute
ENZYME
Enzyme nomenclature database
EROP-Moscow
Endogenous Regulatory OligoPeptide knowledgebase
FABA
Four-dimensional Ascidian Body Atlas
Keio University
FIDD
The Frequency of Inherited Disorders Database
Cardiff University School of Medicine
FishBase
FishBase Consortium
Flytrap
The University of Edinburgh
FMRIDC
The fMRI Data Center
FMA
Foundational Model Anatomy
University of Washington
GeMCRIS
Genetic Modification Clinical Research Information System
Office of Biotechnology Activities
GENATLAS
Universite Rene Descartes
GenBank
BioGPS
Genomics Institute of the Novartis Research Foundation
GeneLoc
GenomeNet
GISD
Global Invasive Species Database
The Invasive Species Specialist Group
GOALL
RIKEN Hub Database Project
HIV Structural Database and Chem-BLAST
National Institute of Standards and Technology
HOVERGEN
Homologous Vertebrate Genes Database
Pole Bioinformatique Lyonnais
Hoppsigen
Homologous Processed Pseudogenes database
HOSTS
A Database of the World's Lepidopteran Hostplants
Natural History Museum
HS3D
Homo Sapiens Splice Sites Dataset
Universita degli Studi del Sannio di Benevento
Human Genome Segmental Duplication Database
IARC TP53 Database
International Agency for Research on Cancer
IMGT/LIGM-DB
IMGT®, the international ImMunoGeneTics information system®/LIGM-DB
INE
INtegrated Rice Genome Explorer : INE
LOCATE
subcellular localization database
The University of Queensland
MAEDA
Micro Array Expression DAta search
MassBank
High Resolution Mass Spectral Database
MassBank Project
MnM
Minimotif Miner (Application to search for short sequence motifs in proteins)
University of Connecticut
University of Nevada
Mouse Genetic Resources
Mammalian Genetics Laboratory, National Institute of Genetics
Myc Cancer Gene
NONCODE
Bioinformatics Research Group, Institute of Computing Technology, Chinese Academy of Sciences.
OBIS
The Ocean Biogeographic information System
Census of Marine Life
OBO
Open Biomedical Ontologies
Berkeley Bioinformatics Open-source Project
Okdb
Ovarian Kaleidoscope Database
OWL
University of Manchester Bioinformatics Education and Research
PDBsum
PlantsT
Functional Genomics of Plant Transporters
Purdue University
PRIDE
PRoteomics IDEntifications database
PKR
Protein Kinase Resource
San Diego Supercomputer Center
RAFL cDNAs
RIKEN Arabidopsis Full-length cDNA
RED
Rice Expression Database
REMIB
The World Biodiversity Information Network (REMIB)
Mexican National Commission on Biodiversity
Repbase
Genetic Information Research Institute
RGP
The Rice Genome Research Program
RIKEN BioResource Center Experimental Animal Division
The Council for SAM Research
SEER
Surveillance Epidemiology and End Results
National Cancer Institute
SHIGEN
SHared Information of GENetic resources
snoRNABase
Laboratoire de Biologie Moleculaire des Eucaryotes
Springer Protocols
Springer Science+Business Media
SRS
Sequence Retrieval System
SMD
Stanford Microarray database
HPV Sequence Database
Los Alamos National Laboratory
OSF online
Orthoptera Species File Online
Illinois Natural History Survey
Museum of Comparative Zoology
The Chromosome 7 Annotation Project
DRAFT SEQUENCE OF FUGU GENOME ASSEMBLY RELEASE 1, 2, 3 and 4
Queen Mary, University of London
The New York Botanical Garden
International Plant Science Center
PomBase
Sanger Institute
United States Regulatory Agencies Unified Biotechnology Website
National Biological Information Infrastructure
WBD
World Biodiversity Database
ETI BioInformatics
Animal Genome Research Program
Database of animal specimens from polar regions
National Institute of Polar Research
Plant Heredity Resource Search
Saga University
Movie Archives of Animal Behavior
Teikyo University of Science & Technology Faculty Life & Environmental Sciences Department of Animal Sciences
Biological Information in Tomakomai Experimental Forest
Hokkaido University The Hokkaido University Museum
Handbook of Antarctic Mosses
Database for Genetic Engineering of Microalgae
Wood Database
3DMET
A three-dimensional-structure database of natural metabolites
5S Ribosomal RNA Database
Institute of Bioorganic Chemistry of the Polish Academy of Sciences
ostogenesis imperfecta & Ehlers-Danlos syndrome variant databases
University of Leicester Department of Genetics
A List of Biodiversity Websites in Japan
Hosei University
ACLAME
A CLAssification of Mobile genetic Elements
Universite Libre de Bruxelles
addgene
Addgene
Algae Resource Database
Allie
A Search Service for Abbreviation / Long Form
Aminoacyl-tRNA synthetases database
Poznan Supercomputing and Networking Center
Analysis of CASP8 targets and predictions
University of Texas Southwestern Medical Center
The Androgen Receptor Gene Mutations Database World Wide Web Server
Lady Davis Institute for Medical Research
AphidBase
The Aphid Genome Database
Institut national de la recherche agronomique
AQUA DNABook
Arabidopsis thaliana EST Index
Arabidopsis thaliana project
Helmholtz Zentrum Munchen
Ares lab Yeast Intron Database
ARSA
All-round Retrieval of Sequence and Annotation
AS-ALPS
Alternative splicing-induced ALteration of Protein Structure
CAoGD
Comprehensive Aspergillus oryzae Genome Database
ASSETs
Alternative Splicing Sequence Enriched Tags
ASTRA
Alternative Splicing and Transcription Archives
AtGenExpress
Atlas (ISH Data Base)
ATTED-II
Arabidopsis thaliana trans-factor and cis-element prediction database
BCBC
Beta Cell Biology Consortium
BeanGenes (A Phaseolus/Vigna sp. Database)
North Dakota State University
Biology Links
Harvard University Department of Molecular and Cellular Biology
Biomarker Candidates (Inferences of Novel Biomarker Candidate Functions)
BioSystems
BMRB
Biological Magnetic Resonance Data Bank
University of Wisconsin System Board of Regents
BombMap
Bombyx mori genome Map information system
Bombyx Trap DataBase
Bookshelf
Breast Tumor Image Database
National Hospital Organization Kyushu Cancer Center
Broad Institute of MIT and Harvard
Broad Institute of Harvard and MIT
Caenorhabditis elegans WWW Server
Virginia Commonwealth University
NCC-CIR
Cancer Image Reference Database
National Cancer Center
Cassava Full-Length cDNA Database
CDT-DB
Cerebellar Development Transcriptome Database
RIKEN(The Institute of Physical and Chemical Research) Wako Institute
CGD
Candida Genome Database
ChimerDB
A Knowledgebase for fusion sequences
Ewha Womans University
Chloroplast Function Database
A database of mutant phenotypes of nuclear-encoded chloroplast proteins
CITRES
Ciona Intestinalis Transgenic line RESources
University of Tsukuba Shimoda Marine Research Center
CleanEx
Clone DB
COGs
Clusters of Orthologous Groups of proteins
Comparasite
Full-length cDNA Database
EBI Genomes Pages
ConfC
Database of conformation changes in protein structures
CDD
Conserved Domain Database
COPE
Cytokines & Cells Online Pathfinder Encyclopedia
CREATE portal
Collaboration of Regional Entities for the Advancement of Technological Excellence
CSML
Cell System Markup Language
CyanoClust database
Database of homologous proteins in cyanobacteria and plastids
Cystic Fibrosis Mutation Database
The Hospital for Sick Children (SickKids)
DaphniaBASE
The Journal of Biological Databases and Curation
Oxford University Press
Database of genomes and transcriptional regulations for filamentous fungi
DB-SPIRE
Database for Structure-based Protein Interaction Research
dbCFC
Cytokine Family Database
Kumamoto University Graduate School of Medical Sciences
dbEST
Expressed Sequence Tags database
dbGaP
Genotypes and Phenotypes
DBH2H
Head-to-head Gene Database
Shanghai Center for Bioinformation Technology
DBSB
DataBase for Systems Biology
RIKEN(The Institute of Physical and Chemical Research) Kobe Institute
dbSTS
database of Sequence Tagged Sites
DGSP
DROSOPHILA GENE SEARCH PROJECT
Tokyo Metropolitan University
Dicty_cDB
Dictyostelium cDNA Database
University of Tsukuba
dictyBase
Northwestern University
DiProDB
Dinucleotide Property Database
FLI - Leibniz Institute for Age Research
Distribution of Human cDNA Clones
DJI
Dictionary of Japanese Insect Names
Pyrococcus DNABook
DPInteract
Harvard University
Dr. Zompo (Data Repository for Seagrass ESTs including: Posidonia oceanica, Zostera marina)
DTA
DDBJ Trace Archive
EBI
Ecgene
Genome Annotation for Alternative Splicing
ECRbase
EMGLib
Enhanced Microbial Genomes Library
Universite Claude Bernard Lyon 1
ENA
European Nucleotide Archive
EnsemblBacteria
Ensembl Project
EnsemblFungi
EnsemblMetazoa
EnsemblPlants
EnsemblProtists
EPD
The Eukaryotic Promoter Database
EpoDB
Erythropoiesis database
University of Pennsylvania
eSOL
Solubility database of all E.coli proteins
EST (A collection of short single-read transcript sequences from GenBank)
ESTHER
ESTerases and alpha/beta Hydrolase Enzymes and Relatives
Evola
Evolutionary annotation database
Evolutionary Trace Server
FABA2
Four-dimensional Ascidian Body Atlas 2
FANTOM3
Functional Annotation of Mouse 3
FANTOM4
Functional Annotation of the Mammalian Genome
Flavonoid Database
The University of Tokyo Graduate School of Science Department of Biophysics and Biochemistry
FLJ Human cDNA Database
Fluorome
The Cyanobacterial Chlorophyll Fluorescence Database
Waseda University School of Education
fRNAdb
Functional RNA Database
FUGU GENOME PROJECT
Institute of Molecular and Cell Biology
Full-Anopheles
Anopheles Full-length cDNA database
Full-Babesia
Babesia Full-length cDNA database
Full-Cryptosporidium
Cryptosporidium Full-Length cDNA Database
Full-Echinococcosis
Echinococcosis Full-length cDNA database
Full-Tsetse
Tsetse Full-length cDNA database
The Plant Organelles Database 2 Functional Analysis Database
Fungus and Actinomycetes Gallery
Chiba University Research Center for Pathogenic Fungi and Microbial Toxicoses
G-compass
GALAXY
Glycoanalysis by the three axes of MS and chromatography
Nagoya City University Graduate School of Pharmaceutical Sciences
MIDB
Gastrointestinal Medical Image Database
Gclust Server
The University of Tokyo Graduate School of Arts and Sciences
GEMCA
Genotyping Microarray based CNV Analysis
Gene Expression in Tooth Database
University of Helsinki
Gene Expression Omnibus (GEO) Overview
Gene Ontology Annotation (UniProtKB-GOA) Database
GeneDB
GENIA Project
The University of Tokyo The Graduate School of Information Science and Technology
GENIUS II
Genolevures
Genomic Exploration of the Hemiascomycete Yeasts
Bordeaux Bioinformatics Center
Genome Databases
Genome Network Platform
BioProject (Formerly Genome Project)
Genome Project of Symbiobacterium thermophilum
Nihon University Advanced Research Institute for the Sciences and Humanities
GenomeAtlasDatabase
Center for Biological Sequence Analysis
Genpac
NalaPro Technologies, Inc.
GENSAT
Gene Expression Nervous System Atlas
GEO Data Sets
GOLD
Genomes Online Database v3.0
DOE Joint Genome Institute
GPCRDB (Information system for G protein-coupled receptors)
Centre for Molecular and Biomolecular Informatics
GRAMENE
Cold Spring Harbor Laboratory
GSS
GWAS DB
Genome wide association database
GyDB
Gypsy Database 2.0
La Universitat de Valencia, Universidad Politecnica de Valencia
H-DBAS
Human-transcriptome DataBase for Alternative Splicing
HATODAS
Heavy-atom Database System
Database for hematological malignancy
HERVd
Human Endogenous Retrovirus Database
Academy of Sciences of the Czech Republic
HGPD
Human Gene and Protein Database
GWAS Central
University of Leicester
HHDB
Hydrogen and Hydration Database
Histone Database
National Human Genome Research Institute, National Institute of Health
HitPredict
A database of high confidence protein-protein interactions
Homeodomain Resource
HUMHOT
Human Meiotic Recombination Hot Spots
Jawaharlal Nehru Centre for Advanced Scientific Research
iCOD
integrated Clinical Omics Database
Tokyo Medical and Dental University
IES MDS Database
Princeton University
IGTC
International Gene Trap Consortium
IMSR
the Internatinal Mouse Strain Resource
The Jackson Laboratory, Medical Research Council
InBase (The Intein Database and Registry)
New England Biolabs Inc.
Info-PubMed
IntAct
IntEnz
Integrated relational Enzyme database
International HapMap Project
IS FINDER
Laboratoire de Microbiologie et Genetique Moleculaire
IUBMB Nomenclature
INTERNATIONAL UNION OF BIOCHEMISTRY AND MOLECULAR BIOLOGY
University of London
J. Craig Venter Institute
JACVSD
Japan Adult Cardiovascular Surgery Database
Japanese Ant Image Database
Miyagi University of Education
JCGGDB
Japan Consortium for Glycobiology and Glycotechnology Database
JCRB Cell Bank
JenaLib
Jena Library of Biological Macromolecules
Fritz Lipmann Institute - Leibniz Institute for Age Research
KaFTom
Kazusa Full-length Tomato cDNA Database
KAIKO Proteome Database
KAIKObase
KAIKOBLAST
KAIKOGAAS
KAIKO Genome Automated Annotation System
KaPPA-View 4
Kazusa Plant Pathway Viewer
KATANA
Kazusa Arabidopsis thaliana Annotation Abstract
KazusaMart1.0
KCGD
Kyoto Chlamydomonas Genome Database
Kyoto University Graduate School of Biostudies
KEGG
Kyoto Encyclopedia of Genes and Genomes
KEGG DAS
KEGG Distributed Annotation System
KEGG GENES Database
Molecular building blocks of life in the genomic space
KEGG GLYCAN
Glycome informatics resource integrating genomics and chemistry
Klotho
Biochemical Compounds Declarative Database
University of Missouri Bioinformatics Consortium
KMaiDB
Keio Mutation autoimmune database
Keio University School of Medicine
KMbloodDB
Keio Mutation blood database
KMbrainDB
Keio Mutation brain database
KMcancerDB
Keio Mutation cancer database
KMDB/MutationView
Keio Mutation Databases
KMearDB
Keio Mutation ear database
KMeyeDB
Keio Mutation eye database
KMheartDB
Keio Mutation heart database
KMmuscleDB
Keio Mutation muscle database
KMsyndromeDB
Keio Mutation syndrome database
KNApSAcK
A Comprehensive Species-Metabolite Relationship Database
KOP
Kazusa ORFeome Project
L1Base
Annotation of Full-Length, Intact L1 Element
University of Wurzburg
Labome.Org
National Center for Biotechnology Information, Computer Retrieval of Information on Scientific Projects, United States Patent and Trademark Office
LEGENDA
Literature-Extracted Gene-Disease Associations
LSDB Archive
Life Science Database Archive
LigandBox
LIGANDs Data Base Open and eXtensible
Lotus japonicus (miyakogusa) EST dataset
Lowe Syndrome Mutation Database
LSDB
Life Science DataBase
M Base
Medaka Genome Database
MachiBase
A Drosophila Melanogaster 5'-end mRNA Transcription Database
MacroArray Analysis Page of Bradyrhizobium japonicum
Osaka University Graduate School of Science
Macrophage Curated Database Index
Makino Herbarium Type Specimen Image Database
MCPA2
Mammalian Crania Photographic Archive Second Edition
Dokkyo Medical University
McSyBi
Multi-document Clustering System for Biomedicine
MDB
Metalloprotein Database and Browser
The Scripps Research Institute
MDeR
The MetaData Element Repository in life sciences
MEDALS
METI database portal for life science
MEDIE
MEROPS
the Peptidase Database
The Sanger Institute
MethDB
the database for DNA methylation and environmental epigenetic effects
MethDB team
Medaka Genome Initiative
MIAMI
Microarray-based Integrated Analysis of Methylation by Isoschizomers
Gunma University Institute for Molecular and Cellular Regulation Biosignal Genome Resource Center
MiBASE
Micro-Tom Database
miRO
The miR-Ontology Database
University of Catania
MitoDat
Mendelian Inheritance and the Mitochondrion
Center for Cancer Research Nanobiology Program
MolMovDB
The database of molecular motions
Mouse Basement Membrane Bodymap
Mouse DNA Microarray
Mouse Genome Databases
Neurogenetics at University of Tennessee Health Science Center
MTB Database
Mouse Tumor Biology Database
MusBanks
A portal to worldwide mutant databases
MutationView
National BioResource Project Bacillus subtilis
NBRP Information Site
NBRP Nenkin
National BioResource Project Cellular slime molds
NCBI
Genome - Genome information for rice
National Institutes of Health
NCL Mutation and Patient Database
University College London
RNA Bibliography - ncRNA.org
Project Specific Custom Tracks - ncRNA.org
Neal's DNA Mutation Site
Glaxo Wellcome, Inc.
Neuraminidase Structure DB
NIJC
Neuroinformatics Japan Center
New Natural Compounds purified in Antibiotics Lab, RIKEN
NEXTDB
The Nematode Expression Pattern DataBase
NIG Mouse Genome Database
NIG Mouse Phenotype Database
Nocardia farcinica Genome Project Page
Noncoding RNA database
Poznan University
NucleaRDB
information system for Nuclear Receptors
University of California, San Francisco, Centre for Molecular and Biomolecular Informatics
Nucleotide
O-GlycBase
O- and C-glycosylated proteins database
OLIGAMI
Oligomer Architecture and Molecular Interface
Soka University
OmicBrowse
OmicScan (Integrating MEDLINE and Omics Database)
OriDB
DNA Replication Origin Database
University of Aberdeen Foresterhill
PANDIT
Protein and Associated Nucleotide Domains with Inferred Trees
The European Bioinformatics Institute
Pathguide
Pathway resource list
Memorial Sloan-Kettering Cancer Center, the University of Toronto
PAZAR
A Public Database of Transcription Factor and Regulatory Sequence Annotation
Centre for Molecular Medicine and Therapeutic
PDB-REPRDB
Representative protein chains from PDB
PDBe
Protein Data Bank Europe
PDDB
Prion Disease Database
Institute for Systems Biology, University of Cambridge
PEDB
Mammalian Promoter/Enhancer Database
Prostate Expression Database
Peptidome - NCBI
Petri Net Pathways
PFDB
Pathogenic Fungi Database
Teikyo University Institute of Medical Mycology
PicSNP
A Catalog of Non-Synonymous SNP
University hospital Medical Information Network
PigGIS
Pig Genomics Informatics System
Beijing Genomics Institute
PiSITE
Database of Protein interaction SITEs
Plant Repeat Databases
PolymiRTS
Polymorphism in microRNA Target Site
The University of Tennessee Health Science Center
Poplar Full-Length Clone Database Search
Popset
Porphyra yezoensis (susabinori) EST dataset
PosMed
Positional MEDLINE
PPI view
Protein-Protein Interaction viewer
PSC-RIKEN Database of EST/Gene Expression
PRIGEN
PRImate GENes
PRIMe
Platform for RIKEN Metabolomics
PRIMe - SpinAssign
Platform for RIKEN Metabolomics - SpinAssign
PRIMe - Standard Spectrum Search
Platform for RIKEN Metabolomics - Standard Spectrum Search
PROPHECY
PROfiling of PHEnotypic Characteristics in Yeast
Goteborgs universitet
Protein Cluster
Pseudomonas Genome Database V2
Simon Fraser University
PTM-Switchboard
PubChem BioAssay
PubChem Compound
PubChem Substance
Radiation Gene
Database of genes transcriptionally modulated by ionizing radiation in mammalian cells
Consorzio interuniversitario per le Applicazioni di Supercalcolo Per Universita e Ricerca / CASPUR
RAPID
RIKEN Arabidopsis Phenome Information Database
Resource of Asian Primary Immunodeficiency Diseases
RARTF
RIKEN Arabidopsis Transcription Factor database
REBASE
The Restriction Enzyme Database
Recode v. 2.0 (Database of translational recoding events)
University College Cork
RVD
The Recombinant Virus Database
RED II
Rice Expression Database II
RefDIC
Reference Database of Immune Cells
RegTransBase
A curated database of regulatory interactions in Prokaryotes
Lawrence Berkeley National Laboratory
Rfam
RNA family database
RIKEN ENU-based gene-driven mutagenesis
Rhodococcus genome Project
Rhodococcus Genome Project
Rice Full-Length cDNA Encyclopedia DNABook
Rice TOGO Browser
RIKEN Activation Tagging Line Database
RIKEN BRC
RIKEN BioResource Center
Arabidopsis activation (T-DNA)-tagged lines
Cell Search System - RIKEN BRC CELL BANK
RIKEN BRC DNA BANK
JCM
RIKEN BRC Japan Collection of Microorganisms
RIKEN BRC PLANT DATABASE SERCH - BLAST Search
RIKEN Hub Database
RIKEN Mouse Genome Encyclopedia DNABook
RSGI
RIKEN Structural Genomics/Proteomics Initiative
RIKEN-CIAT Cassava Full-Length Clone Database Search
ROUGE
A Database of Rodent Unidentified Gene-Encoded Large Proteins Analyzed by Kazusa Mouse cDNA Project
RPOPDB
RIKEN Populus Database
S/MARt DB
The S/MAR transaction DataBase
Gesellschaft fur Biotechnologische Forschung
The SABRE DB
Systematic consolidation of Arabidopsis and other Botanical REsource
SALAD Database
Surveyed conserved motif ALignment diagram and the Associating Dendrogram
Schizosaccharomyces pombe Postgenome Database
Rat Strain List - RIKEN BRC
SEVENS
SMART
Simple Modular Architecture Research Tool
EMBL Heidelberg
snOPY
snoRNA Orthological Gene Database
SNPedia
River Road Bio
Soybean Full-Length cDNA Database
SpBase
Strongylocentrotus purpuratus database
California Institute of Technology
SRA
Sequence Read Archive
SRPDB
Signal Recognition Particle Database
Department of Biochemistry University of Texas Health Science Center
STRBase
Short Tandem Repeat DNA Internet Database
STRING
Search Tool for the Retrieval of Interacting Genes/Proteins
the string team
SubtiList World-Wide Web Server
Institut Pasteur
SubtiWiki
Bacillus subtilis annotationthe "wiki" way!
Georg-August-Universitat Gottingen
Swine Marker Viewer
SWISS-2DPAGE
Two-dimensional polyacrylamide gel electrophoresis database
TAB project
Transcription Analysis of BY-2
TAIR
The Arabidopsis Information Resource
Ohio State University
Tandem Repeats Database
Boston University
TassDB
Tandem Splice Site DataBase
Albert-Ludwigs-University Freiburg
Taxonomy - NCBI
TFdb
Riken Transcription Factor Database
The Candida Albicans Physical Map Website
University of Minnesota
The Kidney Development Database
University of Edinburgh
The Plant Organelles Database 2 Organelles Movie Database
The Plant Organelles Database 2 Organellome Database
The RNA modification database
University at Albany
The tmRNA Website
Indiana University
The Wnt Homepage
THz spectral database
TIGRFAMs
TIGR Plant Transcript Assemblies
TMBETA-GENOME
Annotation of Beta-Barrel Membrane Proteins in Genomic Sequences
TMFunction
Functional Database of Membrane Proteins
Salmonella enterica subsp. enterica serovar Typhimurium
tmRDB
University of Texas Health Science Center
TOMATO (National BioResource Project)
University of Tsukuba Gene Research Center
Swine Linkage Map Viewer
Germline Mutagenesis Database - SB transposon
Transterm
University of Otago
tRNADB-CE
tRNA gene database curated manually by experts
Tropical Medicine and Health
HSG Database
Two-Dimensional Electrophoresis Database of HSG cells proteins
Iwate Medical University School of Dentistry
UgMicroSatdb
Unigene MicroSatellite database
Guru Gobind Singh Indraprastha University/University School of Biotechnology
UK CROPNET
UK Crop Plant Bioinformatics Network
UM-BBD
University of Minnesota Biocatalysis/Biodegradation Database
UniVec
UNKA (BPH) EST
UTGB
UTRdb
Institute for Biomedical Technologies
VarySysDB
VectorDB
Viral Probe Database
Academia Sinica
VISTA Enhancer Browser
WHO/TDR MALARIA Database
Walter and Eliza Hall Institute of Medical Research
WhoGA
Whole Genome Annotation
WORFDB
Worm ORFeome Database
Harvard Medical School
World-2DPAGE Repository
WormBase
Ontario Institute For Cancer Research
Xanthobase
Xanthomonas oryzae pv. oryzae genome database
Yeast Interacting Proteins Database
UMASS Amherst Yeast snoRNA Database
University of Massachusetts Amherst
yMGV
Yeast Microarray Global Viewer
Ecole normale superieure
National BioResource Project Zebrafish
ZFIN
The Zebrafish Model Organism Database
University of Oregon/Zebrafish Information Network
zTRAP
Zebrafish Gene Trap and Enhancer Trap Database
Integrated Cancer Genome Database
Japanese Foundation for Cancer Research
Japanese Fungi on Plants
National Institute for Agro-Environmental Sciences
Digital Atlas of Actinomycetes
EM Navigater
3D Electron Microscopy (3D-EM) Data Navigator
Molecule of the Month
Yorodumi
Protein Globe
VegMarks
a DNA marker database for vegitables
National Agriculture and Food Research Organization,National Institute of Vegetable and Tea Science
Illustrated Encyclopedia of Forage Crop Diseases
National Agriculture and Food Research Organization, National Institute of Livestock and Grassland Science
Trifolium pratense EST Index
MassBase
A comprehensive mass spectral tags archive for plant metabolomics
RnR
Regulatory-network Research in Arabidopsis T87 cultured cells
NEDO database
New Energy and Industrial Technology Development Organization Database
Streptococcus pyogenes
Tokyo Institute of Technology
APASD
Asian-Pacific Alien Species Database
JECDB
Japan Existing Chemical Data Base
National Institute of Health Sciences
NBRC (Biological Resource Center, NITE)
GGDB
GlycoGene Database
GlycoprotDB
GlycoProtein Database
LfDB
Lectin Frontier Database
GMDB
Glycan Mass Spectral DataBase
Rat Brain Sections: Super-fine images
ProSeg
A database of local structures of protein segments
Invasive Species of Japan
National Institute for Environmental Studies
Taxonomy icon
TogoTV
PODB2
Plant Organelles Database 2
Glycoforum
Seikagaku Corporation
KEGG DRUG
Drugs viewed as perturbants to the molecular system
KEGG DISEASE
Diseases viewed as perturbed states of the molecular system
KEGG COMPOUND
Metabolome informatics resource integrating genomics and chemistry
DBGET Search - ENZYME
KEGG GENOME
Organisms and ecosystems with genome sequence information
KEGG ORTHOLOGY (KO) Database
Linking genomes to pathways by ortholog annotation
KEGG REACTION
Knowledge base for predicting biodegradation and biosynthesis
DBGET Search - RPAIR
DBGET Search - VGENES
DBGET Search - VGENOME
3D MR Microscopic Images of Kyoto Collection of Human Embryos
Proteopedia
Protein Quaternary Structure
Gene Wiki
Wikimedia Foundation Inc.
VIPERdb
MedlinePlus
National Library of Medicine
BodyParts3D
Budding yeast cDNA sequencing project
AcEST
Adiantum capillus-veneris EST
BCSDB
Bacterial Carbohydrate Structure Database
Russian Academy of Sciences
PubMeth
Reviewed methylation database in cancer
Ghent University
3D Lectin Database
Centre de Recherches sur les Macromolecules Vegetales
YMP
Yeast Mitochondrial Proteome 2-D database
University of Oulu
Morning Glories Database
Vascular Plant Specimens of Makino Herbarium
TOBIKOBACHI
HANABACHI
ELKUType
DBGET Search - DGENES
DBGET Search - EGENES
KEGG MGENES
KEGG RCLASS
KEGG Reaction Class
VARIOUS MARINE INVERTEBRATES
Research Institute of Marine Invertebrates
EMBRYS
Embryonic Gene Expression Database for Biomedical Research Source
National Medical Center for Children and Mothers Research Institute
EPFDB
Entomopathogenic Fungi Database
National Agriculture and Food Research Organization,National Institute of Fruit Tree Science
RRDB
Rice Research Database
Plant Genome Center Co.,Ltd.
UMIN
BirdBase
Hokkaido Research Organization,Environmental and Geological Research Department Institute of Environmental Sciences
TMIG-2DPAGE Proteome Database
Database of Plant Diseases in Japan
NIAS Genebank : Illustrations of Plant
NIAS Genebank : Illustrations of animal / insects
NIAS Genebank : Databases
MgNEST-DB
Magnaporthe grisea EST Database
GlycomeDB
The carbohydrate structures metadatabase
German Cancer Research Center
GLYCOSCIENCES.de
Justus-Liebig University Giesen
AffinDB
Affynity Database For Protein-Ligand Complexes
Department of Pharmaceutical Chemistry, Philipps-University Marburg
tRNAdb
Transfer RNA Database
University of Leipzig
JASPAR
University of Copenhagen
Human Protein Atlas
Uppsala University
GlycoSuite
MetaCyc
SMPDB
Small Molecule Pathway Database
University of Alberta
HMDB
Human Metabolome Database
Animal Genome Size Database
University of Guelph
IPI
International Protein Index
Plant DNA C-value Database
Royal Botanic Gardens, Kew
BioCarta
Charting Pathways of Life
BioCarta LLC
PMN
Plant Metabolic Network
Carnegie Institution for Science/Department of Plant Biology
Geneimprint
Duke University
ITIS
Integrated Taxonomic Information System
GenProtEC (E. Coli genome and proteome database)
Marine Biological Laboratory
Cancer Genes
Memorial Sloan-Kettering Cancer Center
Pathway Interaction Database
TCGA
The Cancer Genome Atlas Project
CGEMS
Cancer Genetic Markers of Susceptibility
HIV-1, Human Protein Interaction Database
IEDB
Immune Epitope Database
National Institute of Allergy and Infectious Diseases
Health Information
National Institute of Health
GAD
Genetic Association Database
BBID
Biological Biochemical Image Database
National Institute on Aging
LactMed
Drugs and Lactation Database
TOXNET
Toxicology Data Network
HSDB
Hazardous Substances Data Bank
IRIS
Integrated Risk Information System
CCRIS
Chemical Carcinogenesis Research Information System
TOXLINE
Toxicology Literature Online
DART
Developmental and Reproductive Toxicology Database
GENETOX
Genetic Toxicology Data Bank
ITER
International Toxicity Estimates for Risk
GtRNAdb
Genomic tRNA Database
The Multi-Dimensional Human Embryo
University of Michigan
ChromatinDB
Washington State University
IKMC
International Knockout Mouse Consortium
RiceBLAST
Rice sequence database BLAST search
Genome Database ORF Viewer (Xanthomonas oryzae pv. oryzae)
RGRC
Rice Genome Resource Center
GLocate
The Rice Growth Monitoring System
Genome Methylation Database
NIAS Oryza SNP Database
RiceXPro
Rice Expression Profile Database
Koshihikari vs Nipponbare SNP Database
SGP
SILKWORM GENOME RESEARCH PROGRAM
KAIKOcDNA
DGBY
Database for Gene function and expression of Baker's Yeast
National Agriculture and Food Research Organization,National Food Research Institute
Open TG-GATEs
Rare Disease Bank
MBRDB
Medical Bioresource Database
JCRB Gene Bank
Laboratory Animal Resource Bank
Mouse BAC browser
RA target genes in the Ciona embryo
Kochi University Faculty of Science
The NAISTrap database
Database Catalog
Society Catalog
Life Science Projects in Japan
AGE
Ancient Genome Encyclopedia
BodyMap
Human and mouse gene expression database
BodyMap-Xs
anatomical and taxonomical breakdown of animal EST
HOMOPHILA
Human Disease to Drosophila Gene Database
University of California San Diego
PRIME
Protein interaction and Molecular information database
ProLINT
Database for Protein-Ligand Interactions
IRSLDB
Infrared and Raman Spectroscopy Literature Data Base
PINT
Protein-protein Interactions Thermodynamic Database
SAGEmap
Serical Analysis of Gene Expression Tag to Gene Mapping
NCBI (National Center for Biotechnology Information)
ASAP II
the Alternative Splicing Annotation Project II
University of California, Los Angeles
BAInt
Base-Amino Acid Interactions Database
BISMaL
The Biological Information System for Marine Life
Blood SAGE
C. elegans RNAi Phenome Database
CELLPEDIA
CIPRO
Ciona intestinalis Protein Database
Nagoya University Graduate School of Bioagricultural Sciences
Database for Protein-3000 Project
DNA database (DDBJ/EMBL/GenBank=INSD) overview and search
Full-Mite
House Dust Mite Full-Length cDNA Database (Dermatophagoides farinae)
GISSD
Group I Intron Sequence and Structure Database
RNA Research Group at Wuhan University/College of Life Sciences/Wuhan University
Glycoconjugate Data Bank
Hokkaido University
IBRG
Image Bioinformatics Research Group
InSatDb
Insect Microsatellite Database
Centre for DNA Fingerprinting and Diagnostics
Islander
Database of Genomic Islands
Bioinformatics Consortium of Taiwan, Comparative Bioinformatics Services (CBS)
Kinase Pathway Database
Database of kinase, pathways
KTmAbDB
C. elegans Monoclonal Antibody Collection
MICAS
Microsatellite Analysis Server
Molecules To Go
PPDB
PlantPromoterDB
Gifu University
PrognoScan
A new database for meta-analysis of the prognostic value of genes
ProNuc
Protein-Nucleic Acid Complex Database
RIKEN Arabidopsis cDNA Encyclopedia DNABook
SNPSTR
A database of compound microsatellite-SNP markers
Imperial College London
Streptomyces griseus IFO 13350 Genome
Streptomyces griseus subsp. griseus NBRC 13350
TriFLDB
Triticeae Full-Length CDS Database
TriMEDB
Triticeae Mapped EST Database
UTRome
A C.elegans 3'UTR Database
New York University/Center for Genomics and System Biology
WFCC
World Federation for Culture Collections
Database of AQUATIC ORGANISUMS
Fisheries Research Agency
COXPRESdb
The European ribosomal RNA Database
University of Gent/Department of Plant System Biology
PBDB
Pathogenic Bacteria Data Base
Kyoto University Graduate School of Medicine
KEGG EDRUG
SNP Database Network in Japan
Deep Sea Image Database
Marine Biological Sample Database
JFODB
Japan Fisheries Oceanography Database
ExPASy (Bioinformatics Resource Portal)
DrugBank
University of Alberta/Department of Computing Science
The Stem Cell Community
ARMLiPDB
CoP
Co-expressed Biological Processes
DAGViz
Directed Acyclic Graphs Viewer
DIAM
DataBiosafety for Industrial Applications of Microbes
DNA ProbeLocator
H-Exp
KomicMarket
Kazusa Omics Data Market
MS-MS Fragment Viewer
RISH Database
EST Database of Trees for Sustainable Humanosphere
Kyoto University
The database of full-length cDNA and EST sequences of Lotus
CHRIP
Chemical Risk Information Platform
RefExA
Reference database for gene Expression Analysis
Escherichia coil Multi-omics Database
KNApSAck Family
UCSC GenomeBrowser for Functional RNA
National Bioscience Database Center - NBDC
Life Science Database Cross Search
TogoProt
OReFiL
Online Resource Finder for Lifesciences
DRA
DDBJ Sequence Read Archive
RefEx
Reference Expression dataset
Gendoo
Gene, Disease Features Ontology-based Overview System
GGRNA
kusarinoko
Search SRA Entries with PubMed Article
TargetMine
Plabrain DB
Planarian Brain Database
Gene Brain Systems.nimh
National Institute of Mental Health
ClEST
Cimex lectularius EST
RIKEN SSBC
RIKEN Systems and Structural Biology Center
FuLoJa
Lotus japonicus Full-length cDNA Databases
MCG CNV Database
PMPj-Blast
MFSearcher
Kazusa Molecular Formula Searcher
PoSSuM
Pocket Similarity Search using Multiple-Sketches
DoBISCUIT
Database Of BIoSynthesis clusters CUrated and InTegrated
GTPS
Gene Trek in Prokaryote Space
BSD
BioSimulated DataBase
GIB-IS
Genome Information Broker for Insertion sequence
xPSSS
xml-based Protein Structure Search Service
PDBj Mine
Sequence Navigator
Structure Navigator
CiAID
Ciona intestinalis Adult In situ hybridization Database (ver.2 beta)
Chiba University Graduate School of Advanced Integration Science Nanoscience
3DPL
3-Dimensional Protein Localization
Keio University Faculty of Science and Technology
ACBD
Ascidians Chemical Biological Database
Kyoto Human Embryo Visualization Project
Kyoto University Graduate School of Medicine Congenital Anomaly Research Center
List of TP Press Release on Research
Targeted Proteins Research Program
TP Structure Gallery
TP Atlas
Targeted Proteins Atlas
AT Atlas
Advanced Technologies Atlas
PREIMS
PRotein Experimental Information Management System
Glycan Structure (detail page)
PACDB
Pathogen Adherence to Carbohydrate Database
GlycoPOD
GlycoScience Protocol Online Database
TuMaRDB
Tumor Markers Reference Databse
JMSDB
Japan Monosacchairde Database
GDGDB
Glyco-Disease Genes Database
KOmouseDB
Functional Glycomics with KO mice database
JCGGDB Reports
GlycoNAVI Database
The Noguchi Institute
KNApSAcK Biological Activity (Metabolite Activity)
Nara Institute of Science and Technology Graduate School of Information Science
Metabolomics.JP
Mouse strain in RIKEN BioResource Center
Cell lines in RIKEN BioResource Center
BioLOD.org
Biophenome Linked Open Databases
MicrobeDB.jp
MEO
Metagenome/Microbes Environmental Ontology
Metagenome.jp (Human Meta BodyMap)
GTPS/RDF
KEGG MEDICUS
MoM
SNP control database
CNV control DB
copy number variation database
CNV association DB
copy number variation association database
Human Variation DB
human genome variation database
HLA DB
HLA database
Allie Portal
SAHG
Structure Atlas of Human Genome
PGDBj
Plant Genome DataBase Japan
Autophagy Database
Naturalized Plants in Japan ~Seed-Image database~
Okayama University Institute of Plant Science and Resources
RAvariome
Rheumatoid Arthritis variome
National Institute of Advanced Industrial Science and Technology, Biomedicinal Information Research Center
PCDq
Protein Complex Database with complex quality index
Quarterly journal "Biohistory"
JT Biohistory Research Hall
TMBETA-DISC
OpenPML
Japan Biological Informatics Consortium
Mutation Database
CellMontage
AmoebaDB
EuPathDB Bioinformatics Resource Center
AREsite
Institute of Theoretical Chemistry, University of Vienna
ASD
Allosteric Database
Shanghai Jiaotong University
BriX
Flanders Institute of Biotechnology, Free University of Brussels
BSDB
Bio-molecule Stretching Database
Institute of Physics, Polish Academy of Sciences
WDDD
Worm Developmental Dynamics Database
COMBREX
COMputational BRidge to Experiments
CCDB
Cervical Cancer Gene Database
Institute of Cytology and Preventive Oncology
lncRNAdb
Long Non-Coding RNA Database
Institute for Molecular Bioscience, The University of Queensland
miRTarBase
Institute of Bioinformatics and Systems Biology, National Chiao Tung University
PmiRKB
Plant microRNA Knowledge Base
Zhejiang University
TMPad
TransMembrane Protein Helix-Packing Database
Bioinformatics Lab., Institute of Information Science, Academia Sinica
PSSRdb
Polymorphic Simple Sequence Repeats Database
ArachnoServer
Queensland Facility for Advanced Bioinformatics, The University of Queensland
MatrixDB
Extracellular Matrix interactions DataBase
Institut de Biologie et Chimie des Proteines, UMR 5086 CNRS-Universite Lyon 1
CancerResource
Charite - University Medicine Berlin, Institute for Physiology, Structural Bioinformatics Group
HGD
Hymenoptera Genome Database
Georgetown University
PDBWiki
GAIN
Great Ape Information Network
FragmentStore
Charite - University Medicine Berlin, Institute of Physiology, Structural Bioinformatics Group
Species Dictionary
Q-TARO
QTL Annotation Rice Online database
OGRO
Overview of functionally characterized Genes in Rice Online database
ASPicDB
Alternative Splicing Prediction Data Base
Consorzio Interuniversitario per le Applicazioni di Supercalcolo per Universita e Ricerca
SPIKE
Signaling Pathway Integrated Knowledge Engine
UCSC Cancer Genomics Browser
CASA db
Comprehensive Amino Acids Sequences Annotated database
FUJI DB
Functionally Annotated Japanese Protein Structural Information
PCI DB
Protein-Compound Interaction Database
Trypanosomes Database
BISC
BInary SubComplex Database
University of California at Santa Cruz
cBARBEL
Catfish Genome Database
Department of Fisheries and Allied Aquacultures, Auburn University
CADgene
Coronary Artery Disease Gene Database
Huazhong University of Science and Technology
ChemProt
Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark
Clover Garden
Jatropha Genome Database
LegumeTFDB
SoybeanTFDB
PepBase
A peptide database with MS/MS spectra
Soybean Marker Database
KaTomicsDB
TOMATOMA (Tomato Mutants Archive)
Leaf Senescence Database
Center for Bioinformatics, Peking University
RIKEN Plant Hormone Research Network
LIPS
Live Images of Plant Stomata Database
Tohoku Univ. Brassica Seed Bank
Tohoku University Graduate School of Agricultural Science
KAOS
The Kazusa Arabidopsis data opening site
MICROBIAL CULTURE COLLECTION
National Institute for Environmental Studies, NIES
KU-MACC
The Kobe University Macro-Algal Culture Collection
Kobe University Research Center for Inland Seas
Oceanic Islands Plant Specimen Database
Herbarium, University of Tokyo
microForce
ReaD&Researchmap
Gakkai Meikan
PeakDB
HiCEP Peak Database
MOLECULAR PROBE LIBRARY
RaDaP
Radiosynthesis Database of PET Probes
Sagace (Search for Biomedical Data & Resources in Japan)
Gray's Anatomy of the Human Body
Bartleby.com, Inc.
WikiProject Molecular and Cellular Biology
Local Vegetables of Thailand
Japan International Research Center for Agricultural Sciences
Fakara Plants - A database of the plants of the Sahel
Plants in lowland savanna of west Afric
Internal Pu Exposure Animal Pathology Studies Database
MDAID
Graphs of Predicted Monitoring Data
Rare disease clinical trial website
Chemical hazard assessment document
Chemical Evaluation and Research Institute
FFPRI FluxNet Database
ForestGEN
Forest EST and Genome database
PRDB
Phytosociological Releve' Database
Image database of longicorn beetles of Bukit Bangkirai
F.F.P.R.I. Herbarium DataBase
FDDB
Forest Dynamics Database
The Database of Properties of South-east Asian Timbers
MRBP
Minimum Requirements for Biological Products
IASR
Infectious Agents Surveillance Report
HESS
Hazard Evaluation Support System Integrated Platform
GlycosideDB
Search Across Glycoscience DBs - JCGGDB
PDBj-BMRB portal site
KOMICS
Kazusa Metabolomics Portal
Metabolonote
TOT-DB
The Theileria orientalis Genome Annotation Database
Hokkaido University Research Center for Zoonosis Control
Database of Japanese, Chinese, And Korean Fishery Terminology
A-line Database
N-line Database
KNApSAcK DietNavi
KNApSAcK FoodProcessor
KNApSAcK DietDish
KNApSAcK World Map
KNApSAcK Tea Pot
KNApSAcK Biological Activity (Natural Activity)
KNApSAcK Motorcycle
Motorcycle Metabolic Pathway
KNApSAcK MetalMine
KNApSAcK KAMPO
KNApSAcK JAMU DB
KNApSAcK Lunch Box
H-EPD
H-Inv Extended Protein Database
Molecular Profiling Research Center for Drug Discovery, National Institute of Advanced Industrial Science and Technology
Recount DB
SSBD
Systems Science of Biological Dynamics
RIKEN Quantitative Biology Center
KONAGAbase
Brown planthopper Maps & Markers Database
Downlodable Data (Radiation Effects Research Foundation)
Radiation Effects Research Foundation
JACLiD
acupuncture and moxibustion medical care general bibliographic-data-base
Japan College Association of Oriental Medicine
iNTRODB
Integrated Neglected TROpical disease DataBase
Coelacanth Genome Project
National Institute of Genetics
Strawberry GARDEN
Strawberry Genome And Resource Entry
ARTRA
Arabidopsis DNA Microarray probe information
J-CHECK
Japan chemical collaborative knowledge database
PcsEST
KAMEMUSHI (PS: oriental stink bug) EST
PVcDNA
YUSURIKA cDNA
YOKOBAI (NC: green rice leafhopper) EST
Comprehensive Medical Plant Database
AgrID
Agrigenomics Information Database
FANTOM
MiFuP
Microbial Functional Potential
HGVD
Human Genetic Variation Database
TradMPD
Traditional Medical & Pharmaceutical Database
KNApSAcK Bicycle
KNApSAcK Bicycle Algae Metabolic Pathway
Carnation DB
Raphanus sativus Genome DataBase